View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1999_low_51 (Length: 275)
Name: NF1999_low_51
Description: NF1999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1999_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 38524281 - 38524047
Alignment:
| Q |
25 |
aagaaaataaaaagatgagattcattcttcaacattacaaaactcattcacatctgatttacattgtatttaaccattctaatatttttcaatttaaata |
124 |
Q |
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| T |
38524281 |
aagaaaataaaaagatgtgattcattcttcaacattacaaaacgcattcacatctgatttacattgtatttaactattctaatatttttcaatttaaata |
38524182 |
T |
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| Q |
125 |
cattgtaactaatcaacatatcctttatataatttgatatttctcattctaatataatattttggtgtggtgttttgtgcaattcttctgtaggatattg |
224 |
Q |
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|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
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| T |
38524181 |
cattgtaactaatcaatatatcctttatataatttgatttttctcattctaatataatattttggtttggtgttttgtgcaattcttctgtagaatattg |
38524082 |
T |
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| Q |
225 |
aagacaaattgttctcatggccattgcattgaaat |
259 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
38524081 |
aagacaaattgttctcatggccattgcattgaaat |
38524047 |
T |
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