View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20001_high_3 (Length: 642)

Name: NF20001_high_3
Description: NF20001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20001_high_3
NF20001_high_3
[»] chr1 (62 HSPs)
chr1 (3-307)||(49325823-49326127)
chr1 (425-624)||(6889411-6889610)
chr1 (425-624)||(6891257-6891456)
chr1 (415-626)||(13253257-13253467)
chr1 (415-626)||(46846771-46846982)
chr1 (425-626)||(39860362-39860563)
chr1 (425-626)||(8417250-8417451)
chr1 (425-626)||(52222748-52222949)
chr1 (425-626)||(31493342-31493543)
chr1 (425-626)||(17805836-17806032)
chr1 (425-622)||(44969050-44969249)
chr1 (429-626)||(50096942-50097139)
chr1 (430-624)||(6888900-6889093)
chr1 (521-626)||(3831589-3831694)
chr1 (526-626)||(45372684-45372784)
chr1 (305-397)||(49329608-49329700)
chr1 (425-626)||(18353111-18353295)
chr1 (475-626)||(31225484-31225635)
chr1 (425-626)||(19708863-19709074)
chr1 (526-626)||(32239211-32239311)
chr1 (539-626)||(24038361-24038448)
chr1 (425-626)||(33785217-33785428)
chr1 (551-626)||(7109505-7109580)
chr1 (415-506)||(7109603-7109694)
chr1 (552-626)||(34084097-34084171)
chr1 (415-489)||(3831524-3831598)
chr1 (526-619)||(2988775-2988868)
chr1 (553-626)||(18437250-18437323)
chr1 (425-506)||(24038264-24038345)
chr1 (425-506)||(34083992-34084073)
chr1 (425-574)||(10805040-10805189)
chr1 (553-626)||(18448107-18448181)
chr1 (553-626)||(18453200-18453274)
chr1 (433-506)||(18437131-18437204)
chr1 (433-506)||(18447988-18448061)
chr1 (433-506)||(18453081-18453154)
chr1 (432-574)||(42649988-42650130)
chr1 (425-574)||(38672084-38672233)
chr1 (425-574)||(42384223-42384372)
chr1 (556-626)||(13884506-13884575)
chr1 (425-574)||(5499912-5500061)
chr1 (425-485)||(15321939-15321999)
chr1 (425-574)||(39919627-39919776)
chr1 (425-575)||(6305047-6305197)
chr1 (537-622)||(12029245-12029330)
chr1 (517-622)||(31502269-31502374)
chr1 (425-506)||(32239308-32239389)
chr1 (425-574)||(10312013-10312162)
chr1 (514-574)||(47367450-47367510)
chr1 (415-506)||(12029338-12029429)
chr1 (418-456)||(5506940-5506978)
chr1 (515-620)||(8703802-8703907)
chr1 (428-574)||(18342584-18342730)
chr1 (425-574)||(29523018-29523168)
chr1 (425-488)||(45372786-45372846)
chr1 (425-574)||(12298157-12298306)
chr1 (514-565)||(34049968-34050019)
chr1 (425-492)||(34050043-34050110)
chr1 (428-490)||(19507083-19507145)
chr1 (429-587)||(23555772-23555931)
chr1 (521-574)||(15849932-15849985)
chr1 (514-574)||(17386262-17386322)
[»] chr2 (37 HSPs)
chr2 (415-626)||(38213409-38213620)
chr2 (425-623)||(34726228-34726426)
chr2 (429-622)||(29557442-29557635)
chr2 (425-626)||(21198036-21198237)
chr2 (425-626)||(12033725-12033925)
chr2 (453-619)||(18075688-18075854)
chr2 (526-626)||(43616406-43616506)
chr2 (429-626)||(39133255-39133457)
chr2 (425-626)||(40737823-40738034)
chr2 (551-626)||(32084041-32084116)
chr2 (539-626)||(13029028-13029115)
chr2 (537-626)||(5936692-5936782)
chr2 (539-626)||(36983185-36983272)
chr2 (540-626)||(43999555-43999641)
chr2 (425-506)||(13029126-13029207)
chr2 (537-626)||(17852668-17852757)
chr2 (425-506)||(5936791-5936872)
chr2 (429-541)||(7592528-7592640)
chr2 (428-491)||(36985415-36985478)
chr2 (415-506)||(43999653-43999744)
chr2 (557-626)||(27670657-27670725)
chr2 (425-574)||(35959352-35959501)
chr2 (433-506)||(32084134-32084207)
chr2 (433-506)||(43616336-43616409)
chr2 (514-574)||(6283475-6283535)
chr2 (425-574)||(6431539-6431688)
chr2 (515-575)||(1834297-1834357)
chr2 (425-492)||(26260300-26260367)
chr2 (425-492)||(38448066-38448133)
chr2 (428-574)||(2994995-2995141)
chr2 (429-574)||(25879698-25879843)
chr2 (514-574)||(29044210-29044270)
chr2 (425-488)||(6283355-6283418)
chr2 (429-492)||(7298853-7298916)
chr2 (433-506)||(17852771-17852843)
chr2 (425-462)||(29044128-29044165)
chr2 (425-462)||(29768313-29768350)
[»] chr4 (50 HSPs)
chr4 (407-626)||(20039555-20039774)
chr4 (425-626)||(10010768-10010969)
chr4 (425-626)||(10017909-10018110)
chr4 (425-626)||(38307973-38308174)
chr4 (409-626)||(47691580-47691802)
chr4 (425-626)||(40730338-40730539)
chr4 (425-626)||(48826023-48826224)
chr4 (425-626)||(48801137-48801338)
chr4 (425-626)||(8753688-8753888)
chr4 (425-621)||(38973605-38973801)
chr4 (425-626)||(9627509-9627710)
chr4 (430-626)||(16711771-16711967)
chr4 (425-626)||(41487472-41487668)
chr4 (425-626)||(41324314-41324514)
chr4 (427-622)||(7363440-7363634)
chr4 (467-626)||(14599047-14599206)
chr4 (425-624)||(8672762-8672961)
chr4 (527-626)||(23106283-23106382)
chr4 (539-626)||(37010907-37010994)
chr4 (551-626)||(48089714-48089789)
chr4 (521-622)||(11845288-11845389)
chr4 (551-622)||(52225571-52225642)
chr4 (540-626)||(39787584-39787670)
chr4 (474-626)||(32212258-32212410)
chr4 (537-626)||(40412722-40412811)
chr4 (429-506)||(48089812-48089889)
chr4 (425-506)||(37011005-37011085)
chr4 (425-574)||(29590423-29590572)
chr4 (418-587)||(42431696-42431865)
chr4 (425-574)||(48659343-48659492)
chr4 (425-492)||(11845389-11845456)
chr4 (425-492)||(50637214-50637281)
chr4 (425-506)||(52225665-52225746)
chr4 (425-574)||(12582122-12582271)
chr4 (514-574)||(46903845-46903905)
chr4 (425-492)||(31842869-31842936)
chr4 (432-506)||(23106404-23106478)
chr4 (425-587)||(4422083-4422245)
chr4 (428-574)||(17981251-17981397)
chr4 (527-620)||(24390812-24390905)
chr4 (517-574)||(49389547-49389604)
chr4 (515-549)||(7290767-7290801)
chr4 (425-467)||(34553968-34554010)
chr4 (425-462)||(3097928-3097965)
chr4 (522-575)||(20392876-20392929)
chr4 (551-620)||(44523401-44523470)
chr4 (526-618)||(22608830-22608922)
chr4 (525-621)||(23370571-23370662)
chr4 (518-562)||(29525221-29525265)
chr4 (428-492)||(35041811-35041875)
[»] chr7 (44 HSPs)
chr7 (425-626)||(11410544-11410745)
chr7 (425-626)||(2732313-2732514)
chr7 (425-626)||(1411422-1411623)
chr7 (425-626)||(18533264-18533465)
chr7 (425-626)||(41892146-41892347)
chr7 (439-626)||(48214100-48214287)
chr7 (425-626)||(34521156-34521345)
chr7 (416-626)||(8485809-8486019)
chr7 (416-626)||(31673547-31673762)
chr7 (474-626)||(37807030-37807182)
chr7 (526-626)||(4067978-4068078)
chr7 (425-626)||(15943009-15943220)
chr7 (537-626)||(32670247-32670336)
chr7 (539-626)||(14776105-14776192)
chr7 (539-626)||(41399633-41399720)
chr7 (539-626)||(3357075-3357161)
chr7 (425-506)||(14776203-14776284)
chr7 (539-623)||(36820834-36820918)
chr7 (425-506)||(3356983-3357064)
chr7 (551-626)||(12077297-12077372)
chr7 (425-587)||(31377388-31377550)
chr7 (431-506)||(41399731-41399806)
chr7 (425-559)||(44848039-44848173)
chr7 (429-506)||(44980613-44980690)
chr7 (425-574)||(12419106-12419254)
chr7 (425-492)||(43596209-43596276)
chr7 (514-574)||(27595589-27595649)
chr7 (429-500)||(15757671-15757742)
chr7 (418-574)||(32584834-32584990)
chr7 (521-618)||(35516411-35516513)
chr7 (428-574)||(46191620-46191766)
chr7 (425-574)||(10227881-10228030)
chr7 (514-574)||(21441915-21441975)
chr7 (514-574)||(41631519-41631579)
chr7 (425-492)||(13391077-13391144)
chr7 (523-574)||(26574148-26574199)
chr7 (527-618)||(31249307-31249398)
chr7 (577-619)||(25076880-25076922)
chr7 (521-574)||(23671103-23671156)
chr7 (428-574)||(41902790-41902936)
chr7 (514-574)||(2941076-2941136)
chr7 (514-574)||(5667188-5667248)
chr7 (428-456)||(36820937-36820965)
chr7 (518-574)||(44409997-44410053)
[»] chr6 (29 HSPs)
chr6 (425-626)||(3027184-3027385)
chr6 (425-626)||(13276583-13276784)
chr6 (425-626)||(28890808-28891009)
chr6 (425-626)||(4111284-4111485)
chr6 (432-626)||(27613305-27613499)
chr6 (425-626)||(3728952-3729153)
chr6 (425-626)||(5153339-5153540)
chr6 (425-626)||(12296824-12297027)
chr6 (415-626)||(1449756-1449954)
chr6 (425-626)||(8437489-8437673)
chr6 (429-626)||(31803016-31803213)
chr6 (523-626)||(24848993-24849096)
chr6 (540-626)||(24012042-24012128)
chr6 (551-626)||(14610547-14610622)
chr6 (540-626)||(23645939-23646025)
chr6 (425-506)||(24011954-24012035)
chr6 (466-626)||(3257178-3257348)
chr6 (425-574)||(1101211-1101360)
chr6 (425-566)||(34858151-34858292)
chr6 (428-491)||(479214-479277)
chr6 (425-574)||(17156247-17156396)
chr6 (408-456)||(23645865-23645913)
chr6 (425-566)||(32187244-32187385)
chr6 (427-567)||(4174177-4174317)
chr6 (526-618)||(9283818-9283910)
chr6 (429-500)||(1558633-1558704)
chr6 (425-566)||(4229791-4229932)
chr6 (517-574)||(13041647-13041704)
chr6 (412-456)||(9284558-9284602)
[»] scaffold0037 (1 HSPs)
scaffold0037 (425-626)||(81240-81441)
[»] chr8 (42 HSPs)
chr8 (425-626)||(36054543-36054744)
chr8 (425-626)||(11989052-11989253)
chr8 (425-626)||(36684695-36684896)
chr8 (425-626)||(12615143-12615339)
chr8 (425-626)||(10921091-10921291)
chr8 (425-626)||(33303678-33303882)
chr8 (425-592)||(7323125-7323292)
chr8 (537-626)||(23950401-23950490)
chr8 (475-626)||(30577079-30577230)
chr8 (537-626)||(32551495-32551584)
chr8 (425-626)||(26241290-26241501)
chr8 (537-626)||(32415286-32415375)
chr8 (415-505)||(10954352-10954442)
chr8 (415-505)||(10962357-10962447)
chr8 (425-506)||(23950311-23950392)
chr8 (425-506)||(32551593-32551674)
chr8 (429-575)||(35056206-35056352)
chr8 (537-626)||(10954456-10954541)
chr8 (537-626)||(10962461-10962546)
chr8 (425-574)||(38600779-38600928)
chr8 (429-592)||(31519166-31519324)
chr8 (474-574)||(16383884-16383984)
chr8 (525-622)||(35737021-35737118)
chr8 (425-574)||(8000039-8000188)
chr8 (425-574)||(14921389-14921538)
chr8 (428-492)||(40680375-40680439)
chr8 (540-622)||(36918701-36918783)
chr8 (415-462)||(23444409-23444456)
chr8 (430-574)||(32983153-32983297)
chr8 (515-566)||(41478390-41478441)
chr8 (514-559)||(4377003-4377048)
chr8 (521-618)||(12939282-12939379)
chr8 (585-626)||(16383822-16383863)
chr8 (425-574)||(16364933-16365082)
chr8 (425-489)||(44755567-44755631)
chr8 (425-492)||(24580464-24580531)
chr8 (425-463)||(26106401-26106439)
chr8 (427-492)||(7383205-7383270)
chr8 (522-587)||(44710196-44710261)
chr8 (521-574)||(44755622-44755675)
chr8 (425-465)||(12638008-12638048)
chr8 (418-462)||(41478739-41478783)
[»] chr5 (35 HSPs)
chr5 (425-626)||(42062206-42062407)
chr5 (425-626)||(31271333-31271534)
chr5 (433-626)||(4049341-4049534)
chr5 (428-626)||(6644069-6644255)
chr5 (425-626)||(42288407-42288603)
chr5 (425-626)||(4101200-4101403)
chr5 (514-626)||(491341-491453)
chr5 (551-626)||(7079117-7079192)
chr5 (537-626)||(7035275-7035364)
chr5 (425-626)||(12880482-12880666)
chr5 (551-625)||(32298547-32298621)
chr5 (551-626)||(10931740-10931815)
chr5 (425-506)||(7079013-7079094)
chr5 (425-506)||(9163451-9163532)
chr5 (418-587)||(34855331-34855500)
chr5 (425-492)||(491276-491343)
chr5 (429-506)||(7035189-7035266)
chr5 (569-626)||(14084369-14084426)
chr5 (425-574)||(14949476-14949625)
chr5 (418-574)||(27054449-27054605)
chr5 (526-620)||(12724838-12724932)
chr5 (425-574)||(10017786-10017935)
chr5 (425-574)||(18158401-18158550)
chr5 (526-620)||(12786321-12786415)
chr5 (415-542)||(36113138-36113265)
chr5 (425-574)||(40084006-40084155)
chr5 (585-626)||(9163599-9163640)
chr5 (425-506)||(10931641-10931722)
chr5 (514-574)||(3881023-3881083)
chr5 (425-492)||(11877485-11877552)
chr5 (425-492)||(17870075-17870142)
chr5 (428-559)||(13916737-13916867)
chr5 (517-575)||(28210262-28210320)
chr5 (521-574)||(18295296-18295349)
chr5 (557-622)||(24510207-24510272)
[»] chr3 (58 HSPs)
chr3 (425-626)||(28793671-28793872)
chr3 (425-626)||(39391073-39391274)
chr3 (427-626)||(33249437-33249636)
chr3 (428-626)||(40488947-40489145)
chr3 (425-626)||(1782586-1782787)
chr3 (425-626)||(20647697-20647898)
chr3 (425-626)||(34422568-34422769)
chr3 (425-626)||(40000681-40000882)
chr3 (415-626)||(25536849-25537060)
chr3 (425-626)||(52174707-52174908)
chr3 (425-626)||(54650464-54650665)
chr3 (415-626)||(47844508-47844724)
chr3 (428-626)||(47596986-47597184)
chr3 (425-626)||(46068009-46068210)
chr3 (425-626)||(33069336-33069526)
chr3 (425-626)||(55008114-55008315)
chr3 (477-626)||(40000435-40000584)
chr3 (521-626)||(41873501-41873606)
chr3 (530-626)||(53002269-53002365)
chr3 (539-626)||(19421077-19421164)
chr3 (539-626)||(29076979-29077066)
chr3 (466-626)||(46116481-46116641)
chr3 (425-574)||(34705263-34705412)
chr3 (540-626)||(13596272-13596358)
chr3 (537-626)||(34636450-34636539)
chr3 (538-626)||(39171342-39171430)
chr3 (551-626)||(24540905-24540980)
chr3 (539-626)||(33370525-33370612)
chr3 (425-506)||(19420985-19421066)
chr3 (425-506)||(24540998-24541079)
chr3 (429-506)||(34636364-34636441)
chr3 (425-575)||(26994712-26994862)
chr3 (425-506)||(29076887-29076968)
chr3 (425-587)||(41129662-41129824)
chr3 (425-506)||(13596184-13596265)
chr3 (425-574)||(4356976-4357125)
chr3 (428-492)||(39889347-39889411)
chr3 (425-506)||(33370433-33370514)
chr3 (425-587)||(46136303-46136465)
chr3 (425-574)||(9338214-9338363)
chr3 (425-574)||(24133779-24133928)
chr3 (577-626)||(25537108-25537157)
chr3 (418-564)||(50638499-50638645)
chr3 (415-500)||(53002168-53002253)
chr3 (425-566)||(42294132-42294273)
chr3 (551-606)||(18984154-18984209)
chr3 (424-559)||(51302383-51302518)
chr3 (425-559)||(4481672-4481806)
chr3 (521-574)||(43010187-43010240)
chr3 (425-500)||(2222110-2222185)
chr3 (429-564)||(46181818-46181953)
chr3 (585-626)||(34705201-34705242)
chr3 (425-574)||(31405872-31406021)
chr3 (514-574)||(35761461-35761521)
chr3 (517-575)||(24120235-24120293)
chr3 (527-620)||(36672743-36672836)
chr3 (466-506)||(39171439-39171479)
chr3 (415-471)||(53002072-53002128)
[»] scaffold0129 (1 HSPs)
scaffold0129 (425-626)||(40923-41123)
[»] scaffold0065 (1 HSPs)
scaffold0065 (429-622)||(40001-40195)
[»] scaffold0067 (1 HSPs)
scaffold0067 (425-626)||(14240-14440)
[»] scaffold0217 (1 HSPs)
scaffold0217 (462-626)||(15625-15791)
[»] scaffold0005 (1 HSPs)
scaffold0005 (467-626)||(218172-218331)
[»] scaffold0259 (1 HSPs)
scaffold0259 (474-626)||(24849-25001)
[»] scaffold1625 (2 HSPs)
scaffold1625 (538-626)||(1325-1413)
scaffold1625 (425-506)||(1234-1315)
[»] scaffold0886 (1 HSPs)
scaffold0886 (421-575)||(1738-1892)
[»] scaffold0163 (1 HSPs)
scaffold0163 (551-622)||(35923-35993)
[»] scaffold0422 (2 HSPs)
scaffold0422 (514-587)||(10719-10792)
scaffold0422 (425-457)||(10661-10693)


Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 3 - 307
Target Start/End: Original strand, 49325823 - 49326127
Alignment:
Q  3 tccaagaatataaaaatgtaaactaaccaaaatcctccttgataaactaattaaaatatattttatctaggatcagaaatggaaacgtgctcaagggttt 102  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  49325823 tccaagacaataaaaatgtaaactaaccaaaatcctccttgataaactaattaaaatatattttatctaggaacagaaatggaaacgtgctcaagagttt 49325922  T
Q  103 tcaaagaaattgacgggtttcgaaaaattggagaagaaacttctaaccaagggataatatagtggcgacattgggtggtgcagcgatgcaaccacgacga 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  49325923 tcaaagaaattgacgggtttcgaaaaattggagaagaaactcctaaccaagggataatacagcggcgacattgggtggtgcagcgatgcaaccacaacga 49326022  T
Q  203 atttcacagctaaatcaggggaaggcgtgtatcttgcagtagcgatcccttcatgtactattttaaggattaaaattatggtttctatagactaataaaa 302  Q
    || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  49326023 atctcacggctaaatcaggggaaggcgtgtatcttgcagtagtgatcccttcatgtactattttaaggattaaaattatggtttctatagactcataaaa 49326122  T
Q  303 tcgat 307  Q
    |||||    
T  49326123 tcgat 49326127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 425 - 624
Target Start/End: Complemental strand, 6889610 - 6889411
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| || |||||||||||||       |||||| || |    
T  6889610 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatagcctttcataagcctatttttttggcctggccag 6889511  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6889510 gcctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 6889411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 425 - 624
Target Start/End: Complemental strand, 6891456 - 6891257
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| || |||||||||||||       ||||||  |||    
T  6891456 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatagcctttcataagcctatttttttggcctggtctg 6891357  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6891356 gcctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 6891257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 415 - 626
Target Start/End: Original strand, 13253257 - 13253467
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng 514  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||| ||||||| ||||        |    
T  13253257 ggttgggaataggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcataggcct-tttttttg 13253355  T
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttta 614  Q
    ||||| |||| |||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  13253356 gcctggcctggcctatttaaaagtctgacatgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttta 13253455  T
Q  615 aataggcttaat 626  Q
    ||||||||||||    
T  13253456 aataggcttaat 13253467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 415 - 626
Target Start/End: Original strand, 46846771 - 46846982
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng 514  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |||||       |    
T  46846771 ggttgggaataggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctatttttttg 46846870  T
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttta 614  Q
    ||||| |||| |||||||||||| || ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  46846871 gcctggcctggcctatttaaaagcctagcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctactttta 46846970  T
Q  615 aataggcttaat 626  Q
    ||||||||||||    
T  46846971 aataggcttaat 46846982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 39860563 - 39860362
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  39860563 aggccaggctttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 39860464  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39860463 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 39860364  T
Q  625 at 626  Q
    ||    
T  39860363 at 39860362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 8417250 - 8417451
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||| ||||||| |||||       |||||| ||||    
T  8417250 aggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcataggcctatttttttggcctggcctg 8417349  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  8417350 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 8417449  T
Q  625 at 626  Q
    ||    
T  8417450 at 8417451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 52222748 - 52222949
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||| ||||||| |||||       |||||| ||||    
T  52222748 aggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcataggcctatttttttggcctggcctg 52222847  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  52222848 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 52222947  T
Q  625 at 626  Q
    ||    
T  52222948 at 52222949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 31493543 - 31493342
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||  | ||||||||||||||| | ||||||| |||||       |||||  ||||    
T  31493543 aggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcttgagcctggcctatgacatttcataggcctatttttttggcctagcctg 31493444  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||||||||| ||| ||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31493443 acctatttaaaagtctggtctggcccgaaagcttatttacaggcctatttactattaaagtcactaaacattccattttatctacttttaaataggctta 31493344  T
Q  625 at 626  Q
    ||    
T  31493343 at 31493342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 17805836 - 17806032
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||| | ||||||| ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  17805836 aggccaggctttgataggcctgagcctggcatacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 17805935  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||||     ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  17805936 gcctatttaaaagcctggcctga-----aagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 17806030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 425 - 622
Target Start/End: Original strand, 44969050 - 44969249
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||| ||||| || || ||||||| ||||||| |||||       |||||| ||||    
T  44969050 aggccaggctttgataggcctgagcctagcctacgaaaaaatttgcaggcctgatcccggtctatggcctttcataggcctatttttttggcctggcctg 44969149  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaac--atttcattttatctacttttaaataggct 622  Q
    |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||    
T  44969150 acctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcaccaaacatattccattttatctacttttaaataggct 44969249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 429 - 626
Target Start/End: Complemental strand, 50097139 - 50096942
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||  |||||| ||||||||||| ||||||| |||||       |||||| |||| |||    
T  50097139 caggttttgataggcttgagtttggcctacgaaaaaatttgcaggtctgagcatggcctatggcctttcataggcctatttttttggcctggcctggcct 50097040  T
Q  529 atttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| |||| || || ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  50097039 atttaaaagtatggcttggcctgaaagcctatttacaagtctacttactattaaagtaactaaacattccattttatctacttttaaataggcttaat 50096942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 430 - 624
Target Start/End: Complemental strand, 6889093 - 6888900
Alignment:
Q  430 aggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgaccta 529  Q
    ||||||||||||| |||||  |||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||        | |||| |||| ||||    
T  6889093 aggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcataagcctttttttttg-cctggcctggccta 6888995  T
Q  530 tttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||| |||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6888994 tttaaaagcctggcctgacctaaaagcatatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaatagactta 6888900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 521 - 626
Target Start/End: Original strand, 3831589 - 3831694
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    |||| |||||||||||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3831589 cctggcctatttaaaagtctgacctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 3831688  T
Q  621 cttaat 626  Q
    ||||||    
T  3831689 cttaat 3831694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 526 - 626
Target Start/End: Complemental strand, 45372784 - 45372684
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaa 625  Q
    ||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45372784 cctatttaaaagtttggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaa 45372685  T
Q  626 t 626  Q
    |    
T  45372684 t 45372684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 49329608 - 49329700
Alignment:
Q  305 gatgtaagagattagagaaaatagtttctttaagaagaaatagagagaatattaaatgagagactctacaaaatgagaaccaccctaagtgat 397  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  49329608 gatgtaagagatcagagaaaatagtttctttaagaagaaatagagagaatattaaatgagagactctacaaaaggagaaccaccctaggtgat 49329700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 18353111 - 18353295
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||| ||||||| |||||       || ||| ||||    
T  18353111 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcttatggcctttcataggcctattattttggtctggcctg 18353210  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
                |||||||||||     ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18353211 ------------gtctggcctga-----aagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 18353293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 475 - 626
Target Start/End: Complemental strand, 31225635 - 31225484
Alignment:
Q  475 ctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| || |||||||| ||||||| |||||       ||||||| ||||||||||||||||| ||||||| || ||||||||||||||| |  |||||    
T  31225635 ctgagcttgacctatggcctttcataggcctatttttttggcctgatctgacctatttaaaagtttggcctggcctgaaagcctatttacaagcatactt 31225536  T
Q  575 actattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  31225535 actattaaagtcactaaacattccattttatctacttttcaataggcttaat 31225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 19709074 - 19708863
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  19709074 aggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 19708975  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt---acta---ttaa-ag---tcactaaacatttcattttatctactttta 614  Q
     |||||||||||| |||||||| || ||||||||||||||||| ||||||   | ||   |||| ||   |||||||||||| |||||||||||||||||    
T  19708974 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttttaaataggtttaataggcctcactaaacattccattttatctactttta 19708875  T
Q  615 aataggcttaat 626  Q
    ||||||||||||    
T  19708874 aataggcttaat 19708863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 526 - 626
Target Start/End: Complemental strand, 32239311 - 32239211
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaa 625  Q
    |||||||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  32239311 cctatttaaaagtctggcttggcctgaaagactatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtttaa 32239212  T
Q  626 t 626  Q
    |    
T  32239211 t 32239211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 539 - 626
Target Start/End: Original strand, 24038361 - 24038448
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24038361 ctggcctagcccgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 24038448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 33785217 - 33785428
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| |||||   ||||||| | ||||||||||||||||| ||||||| |||||       |||||| ||||    
T  33785217 aggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcttgagcctggcctatggcctttcataggcctatttttttggcctggcctg 33785316  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt---acta---ttaa-ag---tcactaaacatttcattttatctactttta 614  Q
     |||||||||||| |||||||| || ||||||||||||||||| ||||||   | ||   |||| ||   |||||||||||| |||||||||||||||||    
T  33785317 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttttaaataggtttaataggcctcactaaacattccattttatctactttta 33785416  T
Q  615 aataggcttaat 626  Q
    |||||| |||||    
T  33785417 aataggtttaat 33785428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 7109580 - 7109505
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7109580 gaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 7109505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 7109694 - 7109603
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  7109694 ggttaggaataggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcttggcctatggcctttcataagccta 7109603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 552 - 626
Target Start/End: Original strand, 34084097 - 34084171
Alignment:
Q  552 aaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34084097 aaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 34084171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 489
Target Start/End: Original strand, 3831524 - 3831598
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctat 489  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||    
T  3831524 ggttgggaataggccaggctttgataggcctaagcctggcctacgaaaaaatttgcaggcctgagcctggcctat 3831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 526 - 619
Target Start/End: Original strand, 2988775 - 2988868
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatag 619  Q
    |||||||||||| |||| ||| |  ||||| ||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  2988775 cctatttaaaagcctggtctggcatgaaagtctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaatag 2988868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 553 - 626
Target Start/End: Original strand, 18437250 - 18437323
Alignment:
Q  553 aagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  18437250 aagcctatttacaggcctacttactattaaaatcactaaacattccattttatctactttgaaataggcttaat 18437323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 24038264 - 24038345
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||  ||||||||| ||||||||| ||||||| |||||    
T  24038264 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaagcctgagcctagcctatggcctttcataggccta 24038345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 34083992 - 34084073
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  34083992 aggccagactttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagtctggcctatggcctttcataggccta 34084073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 10805040 - 10805189
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||| ||  |||||||||||||| |||| | | ||| |||         |||||| ||||    
T  10805040 aggccaggctttgataggcatgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccgtttttcttggcctggcctg 10805139  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||||||||||| ||||||    
T  10805140 acctatttaaaagcctggactggcctgaaagcctatttacaggcctactt 10805189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 553 - 626
Target Start/End: Original strand, 18448107 - 18448181
Alignment:
Q  553 aagcctatttacaggtctacttactattaaagtcactaaacatttcattttatc-tacttttaaataggcttaat 626  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||    
T  18448107 aagcctatttacaggcctacttactattaaaatcactaaacattccattttatcttactttgaaataggcttaat 18448181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 553 - 626
Target Start/End: Original strand, 18453200 - 18453274
Alignment:
Q  553 aagcctatttacaggtctacttactattaaagtcactaaacatttcattttatc-tacttttaaataggcttaat 626  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||    
T  18453200 aagcctatttacaggcctacttactattaaaatcactaaacattccattttatcttactttgaaataggcttaat 18453274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 18437131 - 18437204
Alignment:
Q  433 ctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  18437131 ctttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggccta 18437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 18447988 - 18448061
Alignment:
Q  433 ctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  18447988 ctttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggccta 18448061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 18453081 - 18453154
Alignment:
Q  433 ctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  18453081 ctttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggccta 18453154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 432 - 574
Target Start/End: Complemental strand, 42650130 - 42649988
Alignment:
Q  432 gctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatt 531  Q
    |||||||||||||||||| | |||| ||||||||||| ||| ||||||||||||||||| | | ||||| |||         ||||||||||| ||||||    
T  42650130 gctttgataggcctgagcctagcctacgaaaaaatttacaggcctgagcctggcctatgacctatcataggccgtttttctaggcctgacctggcctatt 42650031  T
Q  532 taaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| |||| ||| || ||||||||| ||||| | ||||||    
T  42650030 taaaagcctggactggcctgaaagcctaattacaagcctactt 42649988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 38672233 - 38672084
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||| |||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  38672233 aggccaggttttgataggcctgagcctggccttcgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 38672134  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  38672133 acctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 38672084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 42384223 - 42384372
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||| || ||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  42384223 aggccagactttgataggcctgagcctgacctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 42384322  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  42384323 acctatttaaaagtctggactggcctgaaagcctacttacaggcctactt 42384372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 556 - 626
Target Start/End: Complemental strand, 13884575 - 13884506
Alignment:
Q  556 cctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| | ||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  13884575 cctatttacatg-ctacttattattaaagtcactgaacattccattttatctacttttaaattggcttaat 13884506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 5500061 - 5499912
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  |||||||||||| |||||| | |||||||||         |||||| | ||    
T  5500061 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcttatggcctatcataagccgtttttctaggcctggcttg 5499962  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  5499961 gcctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 5499912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 15321999 - 15321939
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggc 485  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||  ||||||||||||    
T  15321999 aggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggc 15321939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 39919627 - 39919776
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||| | | ||||| |||         || ||| ||||    
T  39919627 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatgacctatcataggccgtttttctaggtctggcctg 39919726  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||| ||| || ||||||||| ||||| | ||||||    
T  39919727 acctatttaaaagtctggactggcctgaaagcctacttacatgcctactt 39919776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 575
Target Start/End: Original strand, 6305047 - 6305197
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||||| |||||| ||||||  |||||||||| ||| ||||| ||||||||| ||  | ||||| ||          || ||||||||    
T  6305047 aggccaggctttgataggtctgagcctggcctatgaaaaaatttacaggcctgaacctggcctacggtctatcataggctgtttttctaggtctgacctg 6305146  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
     |||||||||||| |||| ||| || ||||||||| ||||||| |||||||    
T  6305147 gcctatttaaaagcctggactgccctgaaagcctaattacaggcctactta 6305197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 622
Target Start/End: Complemental strand, 12029330 - 12029245
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    |||||||||| || |||| | ||||||||   ||||||| ||||||| ||| |||||||| |||||||||||||| ||||||||||    
T  12029330 gtctggcctggcctgaaaacatatttacaaacctacttattattaaattcattaaacattccattttatctacttctaaataggct 12029245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 622
Target Start/End: Complemental strand, 31502374 - 31502269
Alignment:
Q  517 ctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaa 616  Q
    |||||||||||||||||||||||| | | |||| ||||||||||||| ||   || ||  ||||||||||| |||| | |  ||||||| ||||||||||    
T  31502374 ctgacctgacctatttaaaagtctagaccgacctgaaagcctatttatagacatatttcatattaaagtcattaaatactcaattttatttacttttaaa 31502275  T
Q  617 taggct 622  Q
    ||||||    
T  31502274 taggct 31502269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 32239389 - 32239308
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||| |||||||||||||||| | ||||  ||||   ||||||| ||||||||||||||||||| ||||||| |||||    
T  32239389 aggccaggttttgataggcctgagcctagcctatgaaattttttgcagtcctgagcctggcctatggcctttcataggccta 32239308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 10312013 - 10312162
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||| |||||||||||||||||||| |||||| | |||||| || ||  |||||||||||||| |||| | | ||| |||         |||||| ||||    
T  10312013 aggctaggctttgataggcctgagcctggcctacaaaaaaaattacaagcctgagcctggcctgtggcctataataggccgtttttcttggcctggcctg 10312112  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    | ||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  10312113 atctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 10312162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 47367510 - 47367450
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||| ||||||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  47367510 ggcctgacctggcctatttaaaagtctggactggcctgaaagcctacttacaggcctactt 47367450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 12029429 - 12029338
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||||| |||||||||||||||||| || ||| | ||    ||||||  ||||||||||||||||| | ||||||| |||||    
T  12029429 ggttgggaataggccaagctttgataggcctgagcctgacctacaaatttttttgcaagcctgagcctggcctatgacatttcatatgccta 12029338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 456
Target Start/End: Complemental strand, 5506978 - 5506940
Alignment:
Q  418 tgggaataggccaggctttgataggcctgagcttggcct 456  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  5506978 tgggaataggccaggctttgataggcctgagcctggcct 5506940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 620
Target Start/End: Complemental strand, 8703907 - 8703802
Alignment:
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttta 614  Q
    ||||| |||| |||||||||||||||| ||||    | |||| |||||||||| ||||||  |||||| ||||||||| |||  ||||  ||||||||||    
T  8703907 gcctggcctggcctatttaaaagtctgacctggattggaagcatatttacaggcctacttcgtattaatgtcactaaatattcaatttcctctactttta 8703808  T
Q  615 aatagg 620  Q
    ||||||    
T  8703807 aatagg 8703802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 574
Target Start/End: Original strand, 18342584 - 18342730
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||| ||||||||||| ||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| |||| ||    
T  18342584 ccagactttgataggcttgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctgtcctggcc 18342683  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||||| ||| || ||||||||| ||||| | ||||||    
T  18342684 tatttaaaagtctggactggcctgaaagcctacttacaagcctactt 18342730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 29523168 - 29523018
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaa-aaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacct 523  Q
    |||||||||||||||||| |||||| |||||| ||||| ||| |  ||  ||||||| ||||||||||| | ||||| |||         ||||||  ||    
T  29523168 aggccaggctttgataggtctgagcctggcctacgaaataaaatcacaagcctgagcttggcctatggcctatcataggccgtttttctaggcctggtct 29523069  T
Q  524 gacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    | ||||||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  29523068 ggcctatttaaaagtctggactggcctgaaagcctacttacaggcctactt 29523018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 425 - 488
Target Start/End: Complemental strand, 45372846 - 45372786
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggccta 488  Q
    |||||||||||| |||||||||||| |||||   ||||||||||||||  ||||||||||||||    
T  45372846 aggccaggcttttataggcctgagcatggcc---gaaaaaatttgcaggtctgagcctggccta 45372786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 12298157 - 12298306
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||| ||| |||||||||||||||  |||||| |||||||| |  ||  ||||||||||||| ||||| | ||||| |||         |||||| ||||    
T  12298157 aggctaggttttgataggcctgagtctggcctacgaaaaaaatcacaagcctgagcctggccaatggcctatcataggccgtttttctaggcctggcctg 12298256  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  12298257 gcctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 12298306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Complemental strand, 34050019 - 34049968
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttaca 565  Q
    |||||| |||||||||||||||||||||| ||| || ||||||||| |||||    
T  34050019 ggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttaca 34049968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 34050110 - 34050043
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||| ||||||||||  ||||| |||||| ||||||||||| ||  |||||||||||||| ||||    
T  34050110 aggccagactttgataggtttgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggc 34050043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 490
Target Start/End: Original strand, 19507083 - 19507145
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatg 490  Q
    |||||||||||||||||||||| |||||| ||||| || || ||  |||||||||| ||||||    
T  19507083 ccaggctttgataggcctgagcctggcctacgaaataaattacaagcctgagcctgacctatg 19507145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 587
Target Start/End: Original strand, 23555772 - 23555931
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcg-aaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    ||||||||||||||||||||| |||||| || ||||||| | ||  |||||||||||||| |||| | | ||| |||         || ||| |||||||    
T  23555772 caggctttgataggcctgagcctggcctacgaaaaaaatatacaagcctgagcctggcctgtggcctattataggccgtttatcttggtctggcctgacc 23555871  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    |||||||||| |||| ||| ||  |||||||| ||||||| ||||||  |||||| ||||    
T  23555872 tatttaaaagcctggactggcctaaaagcctacttacaggcctactttatattaaggtca 23555931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 15849932 - 15849985
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  15849932 cctgacctatttaaaagcctggactggcctgaaagcctacttacaggactactt 15849985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 17386322 - 17386262
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| ||||||||||||||||| |||| ||| |  ||||||||| ||||||| ||||||    
T  17386322 ggcctggcctgacctatttaaaagcctggactggcttgaaagcctacttacaggcctactt 17386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 1e-79; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 415 - 626
Target Start/End: Original strand, 38213409 - 38213620
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng 514  Q
    |||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||| ||||||| |||||       |    
T  38213409 ggttgggaataggccaggttttgataggcctgagcctggcctacaaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttg 38213508  T
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttta 614  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38213509 gcctggcctgacctatttaaaagtctggcctgacctgaaagcctatttacaggtctacttactattaaagtcactaaacattccattttatctactttta 38213608  T
Q  615 aataggcttaat 626  Q
    ||||||||||||    
T  38213609 aataggcttaat 38213620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 425 - 623
Target Start/End: Complemental strand, 34726426 - 34726228
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||| ||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  34726426 aggccaggctttgataggcctgagcctggcctacgaaaaattttacaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 34726327  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctt 623  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34726326 acctatttaaaagcctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctt 34726228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 429 - 622
Target Start/End: Original strand, 29557442 - 29557635
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||| ||||||| |||||       ||| || |||| |||    
T  29557442 caggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggcctatttttttggcatggcctggcct 29557541  T
Q  529 atttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29557542 atttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 29557635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 21198237 - 21198036
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||        ||||| ||||    
T  21198237 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttagcctggcctg 21198138  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| ||| |||| ||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21198137 gcctatttaaaagcctgacctggcctaaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 21198038  T
Q  625 at 626  Q
    ||    
T  21198037 at 21198036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 12033925 - 12033725
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||| |||||| | ||||| ||||||| ||||||||||||||||||| ||||||| |||||       ||||||  |||    
T  12033925 aggccagactttgataggcctgagcctggcctac-aaaaattttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggtctg 12033827  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  12033826 gcctatttaaaagtctggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 12033727  T
Q  625 at 626  Q
    ||    
T  12033726 at 12033725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 453 - 619
Target Start/End: Complemental strand, 18075854 - 18075688
Alignment:
Q  453 gcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccga 552  Q
    |||| ||||||||||||||| | ||||| ||||||||||| |||||||  ||||       |||||| |||||||||||||||||||||||||| || ||    
T  18075854 gcctacgaaaaaatttgcaggcttgagcttggcctatggcctttcatagacctatttttttggcctggcctgacctatttaaaagtctggcctggcctga 18075755  T
Q  553 aagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatag 619  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18075754 aagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatag 18075688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 526 - 626
Target Start/End: Original strand, 43616406 - 43616506
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaa 625  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43616406 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaa 43616505  T
Q  626 t 626  Q
    |    
T  43616506 t 43616506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 429 - 626
Target Start/End: Original strand, 39133255 - 39133457
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    ||||||||||||||| ||||| ||| || ||||||  ||||||| | ||||||||| ||||||| ||||||| |||||       || |||  ||| |||    
T  39133255 caggctttgataggcttgagcctggtctacgaaaatttttgcaggcttgagcctggtctatggcctttcataggcctattttgttggtctggtctggcct 39133354  T
Q  529 atttaaaagtctggcctgac-----ccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctt 623  Q
    | |||||||||||||||| |     | | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39133355 acttaaaagtctggcctggcatggcctgcaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctt 39133454  T
Q  624 aat 626  Q
    |||    
T  39133455 aat 39133457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 40737823 - 40738034
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  40737823 aggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 40737922  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt---acta---ttaa-ag---tcactaaacatttcattttatctactttta 614  Q
     |||||||||||| |||||||| || ||||||||||||||||| ||||||   | ||   |||| ||   |||||||||||| |||||||||||||||||    
T  40737923 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttttaaatatgtttaataggcctcactaaacattccattttatctactttta 40738022  T
Q  615 aataggcttaat 626  Q
    ||||||||||||    
T  40738023 aataggcttaat 40738034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 32084116 - 32084041
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32084116 gaaagcctatttacaggtctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 32084041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 539 - 626
Target Start/End: Complemental strand, 13029115 - 13029028
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  13029115 ctggcctggcctgaaagcctatttacaggcctacttactatcaaagtcactaaacattccattttatctacttttaaataggcttaat 13029028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 5936782 - 5936692
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctac-ttttaaataggcttaat 626  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  5936782 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttttaaataggcttaat 5936692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 539 - 626
Target Start/End: Complemental strand, 36983272 - 36983185
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36983272 ctggcctggcctgaaagcctatttacaagcctatttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 36983185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 540 - 626
Target Start/End: Complemental strand, 43999641 - 43999555
Alignment:
Q  540 tggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| ||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  43999641 tggcctgacctgaaagcctatttacaggcctacttgctattaaaatcactaaacattccattttatctacttttaaatagacttaat 43999555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 13029207 - 13029126
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  13029207 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 13029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 17852757 - 17852668
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||| ||||| ||||||||||| ||||||||| ||||||| |||||||||  ||||||||||| |||||||||||||||||    
T  17852757 gtctggcctgacctgaaagtctatttacaggcctacttactcttaaagttactaaacataccattttatctatttttaaataggcttaat 17852668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 5936872 - 5936791
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||||||||| |||| |||||| |||||||||||| || ||||||||||||||||||| ||||||| |||||    
T  5936872 aggccaggctttgataggcccgagcctggcctacgaaaaaatttgtaggcctgagcctggcctatggcctttcataggccta 5936791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 541
Target Start/End: Complemental strand, 7592640 - 7592528
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    |||||||||||| |||||||| |||||| ||||||| ||||||| ||||||| ||||||||||| ||||||| |||||        | ||||||||||||    
T  7592640 caggctttgatacgcctgagcctggcctacgaaaaattttgcaggcctgagcatggcctatggcctttcataggcctattttttttgtctgacctgacct 7592541  T
Q  529 atttaaaagtctg 541  Q
    |||||||||||||    
T  7592540 atttaaaagtctg 7592528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 428 - 491
Target Start/End: Complemental strand, 36985478 - 36985415
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatgg 491  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  36985478 ccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatgg 36985415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 43999744 - 43999653
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||||| |||||||||| ||||||| |||| |  |||||||||||||| |||||||||| |||||||| ||||||| |||||    
T  43999744 ggttgggaataggccaagctttgatagacctgagcctggcttatgaaaaaatttgcaggcctgagcctgacctatggcctttcataggccta 43999653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 557 - 626
Target Start/End: Complemental strand, 27670725 - 27670657
Alignment:
Q  557 ctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  27670725 ctatttacaggcctacttactattaaagtcactaaacattccatttta-ctacttttaaataagcttaat 27670657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 35959352 - 35959501
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||| |||||||||||||||||| |||||| ||||||||||| ||  |||||||||||||| |||| | | ||| |||         || ||| ||||    
T  35959352 aggccaagctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccgtttttcttggtctggcctg 35959451  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| |||||| ||||||||| ||||||| ||||||    
T  35959452 acctatttaaaagcctggactgacctgaaagcctacttacaggcctactt 35959501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 32084207 - 32084134
Alignment:
Q  433 ctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||  |||||| ||||||||||||||| |||||||||| |||||||| ||||||| |||||    
T  32084207 ctttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcataggccta 32084134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 43616336 - 43616409
Alignment:
Q  433 ctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||| |||||| ||||||| ||||||| |||||| ||||| |||||| ||||||| |||||    
T  43616336 ctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagtctggcttatggcctttcataggccta 43616409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 514 - 574
Target Start/End: Original strand, 6283475 - 6283535
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||    
T  6283475 ggcctggcctgacctatttaaaagtctggactgacctgaaagcctacttacaggcctactt 6283535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 6431539 - 6431688
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  |||||| |||||||||||| | ||||| |||         || ||| ||||    
T  6431539 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatggcctatcataggccgtttttctaggtctggcctg 6431638  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| ||||||||||||||    
T  6431639 gcctatttaaaagcctggactggcctgaaagcctacttacaggtctactt 6431688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 575
Target Start/End: Complemental strand, 1834357 - 1834297
Alignment:
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
    ||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| |||||||    
T  1834357 gcctgacctgacctatttaaaagcctggactggcctgaaagcctaattacaggcctactta 1834297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 26260367 - 26260300
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  |||||||||||||||||||    
T  26260367 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggc 26260300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 38448133 - 38448066
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  |||||||||||||||||||    
T  38448133 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggc 38448066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 574
Target Start/End: Complemental strand, 2995141 - 2994995
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||| ||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| |||| ||    
T  2995141 ccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctggcc 2995042  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||| |||| ||| || ||||||||| ||||| | ||||||    
T  2995041 tatttaaaagcctggactggcctgaaagcctacttacaagcctactt 2994995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 25879843 - 25879698
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    ||||||||||||| |||||||||||||| ||||| || |  ||  ||| ||||||||||||| | | ||||| |||         |||||| |||| |||    
T  25879843 caggctttgatagacctgagcttggcctacgaaataaatcacaagcctaagcctggcctatgacctatcataggccgtttttctaggcctggcctggcct 25879744  T
Q  529 atttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||||  || || ||||||||| ||||||| ||||||    
T  25879743 atttaaaagtctggattggcctgaaagcctacttacaggcctactt 25879698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 574
Target Start/End: Original strand, 29044210 - 29044270
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||| |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  29044210 ggcctgacctggcctatttaaaagcctggactggcctgaaagcctacttacaggactactt 29044270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 488
Target Start/End: Original strand, 6283355 - 6283418
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggccta 488  Q
    ||||||| ||||||||||| ||||  |||||| ||||||||||| ||  |||||||||||||||    
T  6283355 aggccagactttgataggcttgagtctggcctacgaaaaaatttacaagcctgagcctggccta 6283418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 7298853 - 7298916
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||  |||||| ||||||||||| ||  |||||| ||||||| ||||    
T  7298853 caggctttgataggcctgagtctggcctacgaaaaaatttacaagcctgagtctggcctgtggc 7298916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 17852843 - 17852771
Alignment:
Q  433 ctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||  |||||| | |||||| |||||| ||||||| ||| ||||||| ||||||| |||||    
T  17852843 ctttgataggcctgagtctggcctac-aaaaaaattgcaggcctgagcttggtctatggcctttcataggccta 17852771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 462
Target Start/End: Original strand, 29044128 - 29044165
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaa 462  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  29044128 aggccaggctttgataggcctgagcctggcctacgaaa 29044165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 462
Target Start/End: Original strand, 29768313 - 29768350
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaa 462  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  29768313 aggccaggctttgataggcctgagcctggcctacgaaa 29768350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 407 - 626
Target Start/End: Complemental strand, 20039774 - 20039555
Alignment:
Q  407 ccaattaaggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  20039774 ccaattagggttgggaataggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 20039675  T
Q  507 nnnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatc 606  Q
           |||||| ||||  |||||||||||  || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  20039674 tttttttggcctggcctggtctatttaaaagcatgccctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatc 20039575  T
Q  607 tacttttaaataggcttaat 626  Q
    ||||||||||||||||||||    
T  20039574 tacttttaaataggcttaat 20039555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 10010969 - 10010768
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||  ||||||| |||||       |||||| ||||    
T  10010969 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggtctttcataggcctattattttggcctggcctg 10010870  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10010869 acctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 10010770  T
Q  625 at 626  Q
    ||    
T  10010769 at 10010768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 10018110 - 10017909
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||  ||||||| |||||       |||||| ||||    
T  10018110 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggtctttcataggcctattattttggcctggcctg 10018011  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10018010 acctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 10017911  T
Q  625 at 626  Q
    ||    
T  10017910 at 10017909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 38308174 - 38307973
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  38308174 aggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 38308075  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38308074 gcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 38307975  T
Q  625 at 626  Q
    ||    
T  38307974 at 38307973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 409 - 626
Target Start/End: Original strand, 47691580 - 47691802
Alignment:
Q  409 aattaaggttgggaataggccaggc-----tttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagc 503  Q
    ||||| |||||||||||||||||||     |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| ||    
T  47691580 aattagggttgggaataggccaggccagactttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggc 47691679  T
Q  504 ctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcatttt 603  Q
    |||       |||||| |||| |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  47691680 ctattattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccatttt 47691779  T
Q  604 atctacttttaaataggcttaat 626  Q
    |||||||||||||||||||||||    
T  47691780 atctacttttaaataggcttaat 47691802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 40730539 - 40730338
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  40730539 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 40730440  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| || ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40730439 gcctatttaaaagcctagcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 40730340  T
Q  625 at 626  Q
    ||    
T  40730339 at 40730338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 48826023 - 48826224
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  48826023 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 48826122  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||| ||||| || ||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48826123 gcctatttaaaagtctagcctggcctgaaagcctatttataggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 48826222  T
Q  625 at 626  Q
    ||    
T  48826223 at 48826224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 48801338 - 48801137
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||| | ||||||| |||||       ||||||  |||    
T  48801338 aggccaggctttgataggcctgagcctggccaacgaaaaaatttgcaggcctgagcctggcctatgacctttcataggcctatttttttggcctggtctg 48801239  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||||||||  || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48801238 tcctatttaaaagtctggtttggcctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 48801139  T
Q  625 at 626  Q
    ||    
T  48801138 at 48801137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 8753888 - 8753688
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||||||||    
T  8753888 aggccaggctttgataggcatgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctgacctg 8753789  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||  ||| || ||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8753788 gcctatttaaaagtctgatctggcctgaaagccta-ttataggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 8753690  T
Q  625 at 626  Q
    ||    
T  8753689 at 8753688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 425 - 621
Target Start/End: Original strand, 38973605 - 38973801
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||| |||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||||||||    
T  38973605 aggccatgctttgataggcctgagcctggactacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctgacctg 38973704  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggc 621  Q
     |||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  38973705 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctatttttaaataggc 38973801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 9627509 - 9627710
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| | ||| ||||||||| |||||| ||| |||||||| ||||||| |||||       |||||| |||     
T  9627509 aggccaggctttgataggcctgagcctggcctacaaaagaatttgcaggcctgagtctgacctatggcctttcataggcctatttttttggcctgcccta 9627608  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9627609 gcctatttaaaagtctggcctgacctgaaagcctatttataggccttcttactattaaagtcactaaacattccattttatctacttttaaataggctta 9627708  T
Q  625 at 626  Q
    ||    
T  9627709 at 9627710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 430 - 626
Target Start/End: Original strand, 16711771 - 16711967
Alignment:
Q  430 aggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgaccta 529  Q
    ||||||||||||| |||||  |||||| ||||||||||||||| ||||||||||||||||||| ||||| | |||||       |||||| |||| ||||    
T  16711771 aggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcacaggcctattcttttggcctggcctggccta 16711870  T
Q  530 tttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  16711871 tttaaaagtctggcctgacctgaaaacctatttacaggcctacttactattaaagtcactaaacattccattttatatacttttaaataggtttaat 16711967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 41487472 - 41487668
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||           | |||||    
T  41487472 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctatttttt-----taacctg 41487566  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41487567 acctatttaaaagtctagcctggcctgaaagcctatttacaggcctacttactattaaagtcattaaacatttcattttatctacttttaaataggctta 41487666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 41324514 - 41324314
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||  |||||| ||||||| ||||||| |||||| |||||||||||| ||||||| |||||       || |||  |||    
T  41324514 aggccaggctttgataggcctgagtctggcctacgaaaaa-tttgcaggcctgagtctggcctatggcctttcataggcctatttttttggtctggtctg 41324416  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||    
T  41324415 gcctatttaaaagtctggtctgacctgaaagcctatttacagggctacttactattaaagtcactaaacattccattttatctatttttaaataggttta 41324316  T
Q  625 at 626  Q
    ||    
T  41324315 at 41324314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 427 - 622
Target Start/End: Complemental strand, 7363634 - 7363440
Alignment:
Q  427 gccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgac 526  Q
    ||||||||||||||| | ||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||       |  ||| |||| |    
T  7363634 gccaggctttgatag-cttgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctatttttttgatctggcctggc 7363536  T
Q  527 ctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7363535 ctacttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggct 7363440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 467 - 626
Target Start/End: Original strand, 14599047 - 14599206
Alignment:
Q  467 ttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacag 566  Q
    |||||| |||||| |||||||||||| ||||||| |||||       ||  ||  ||| ||||||||||||||||||||| || ||||||||||||||||    
T  14599047 ttgcaggcctgagtctggcctatggcctttcataggcctatttttttggtttggtctggcctatttaaaagtctggcctggcctgaaagcctatttacag 14599146  T
Q  567 gtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14599147 gcttatttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 14599206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 425 - 624
Target Start/End: Original strand, 8672762 - 8672961
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||  ||||  | | || |||||||||||||||  |||| | ||||||||||| ||||||| |||||        || ||  |||    
T  8672762 aggccaggctttgataggtttgagtctagtctacgaaaaaatttgcaggtctgaacttggcctatggcctttcataggcctattttttttgcttggtctg 8672861  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     | ||||||||||||| ||||| ||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8672862 gcttatttaaaagtctagcctggcctaaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 8672961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 527 - 626
Target Start/End: Complemental strand, 23106382 - 23106283
Alignment:
Q  527 ctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||| ||| |||||| ||||||||||||||| |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23106382 ctatttaaaagtttggtctgacctgaaagcctatttacaagcttacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 23106283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 539 - 626
Target Start/End: Complemental strand, 37010994 - 37010907
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37010994 ctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 37010907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 48089789 - 48089714
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48089789 gaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 48089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 521 - 622
Target Start/End: Complemental strand, 11845389 - 11845288
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    |||| ||||||||||||| ||||||| |  ||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11845389 cctggcctatttaaaagtttggcctggcttgaaagcctatttaaaggcctacttactattaaagtcactaaacattccactttatctacttttaaatagg 11845290  T
Q  621 ct 622  Q
    ||    
T  11845289 ct 11845288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 551 - 622
Target Start/End: Complemental strand, 52225642 - 52225571
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  52225642 gaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctatttttaaataggct 52225571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 540 - 626
Target Start/End: Complemental strand, 39787670 - 39787584
Alignment:
Q  540 tggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  39787670 tggcctggcctgaaaacctatttacaggtctacttactattaaagtcactaaacattccattttatctatttttgaataggcttaat 39787584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 474 - 626
Target Start/End: Original strand, 32212258 - 32212410
Alignment:
Q  474 cctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctact 573  Q
    |||||||| |||||||| | ||||||| |||||       || ||| ||| ||||||||||||| |||| ||| || |||||| |||| ||||| |||||    
T  32212258 cctgagccgggcctatgacctttcataggcctattttcttggtctggcctaacctatttaaaagcctggtctggcctgaaagcttattcacaggcctact 32212357  T
Q  574 tactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||| |||||    
T  32212358 tactattaaagtcactaaacattcaattttgtctacttttaaataggtttaat 32212410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 40412811 - 40412722
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||| |||| | ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||   |||||||||||||||||    
T  40412811 gtctggtctgatctgaaagcctatttacaggcctacttactattaaagtcactaaatattccattttatcagtttttaaataggcttaat 40412722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 429 - 506
Target Start/End: Complemental strand, 48089889 - 48089812
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||| ||||||| |||||    
T  48089889 caggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcatatggcctttcataggccta 48089812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 37011085 - 37011005
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  37011085 aggccagactttgataggcctgagcctggcctacgaaaaaatttgcaggcctgag-ctggcctatggcctttcataggccta 37011005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 29590572 - 29590423
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  29590572 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttttaggcctggcctg 29590473  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||| ||  || ||||||||| ||||||| ||||||    
T  29590472 acctatttaaaagtctggactagcctgaaagcctacttacaggcctactt 29590423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 587
Target Start/End: Complemental strand, 42431865 - 42431696
Alignment:
Q  418 tgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcc 517  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| || |  || || |||| |||||||||||  | ||||| |||         | ||    
T  42431865 tgggaataggccaggctttgataggcctgagcttggcctaccaaataaatcacaaacttgagtctggcctatggtctatcatatgccgtttttctagtcc 42431766  T
Q  518 tgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    ||| ||| ||||||||||||||||| ||| || ||||||||| ||||||||||||||  |||||| ||||    
T  42431765 tgatctggcctatttaaaagtctggactggcctgaaagcctacttacaggtctacttcatattaaggtca 42431696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 48659343 - 48659492
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||| |||||||||||||||||||| | |||| ||||||||||| ||| ||||||||||||||||| | | ||||| |||         |||||||| ||    
T  48659343 aggctaggctttgataggcctgagcctagcctacgaaaaaatttacaggcctgagcctggcctatgacctatcataggccgtttttctaggcctgacttg 48659442  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||| ||||| | ||||||    
T  48659443 acctatttaaaagcctggactggcctgaaagcctaattacaagcctactt 48659492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 11845456 - 11845389
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| |||||||||||||||||||    
T  11845456 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggc 11845389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 50637281 - 50637214
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    |||||||||||||||||||||||||||||||| ||||| || |  || ||||||| ||||||||||||    
T  50637281 aggccaggctttgataggcctgagcttggcctacgaaataaatcacaaacctgagtctggcctatggc 50637214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 52225746 - 52225665
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||| |||||||||| |||||  | | || ||||||||||||||| |||||||||||||||| || ||||||| |||||    
T  52225746 aggccagactttgataggtctgagtctagtctacgaaaaaatttgcaggcctgagcctggcctatagcctttcataggccta 52225665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 12582122 - 12582271
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||  |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| ||          |||||| ||||    
T  12582122 aggccaggctttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggctgtttttctaggcctggcctg 12582221  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  12582222 gcctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 12582271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 46903905 - 46903845
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| |||||||||||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  46903905 ggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctactt 46903845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 31842869 - 31842936
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  |||||||||||||||||||    
T  31842869 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggc 31842936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 506
Target Start/End: Complemental strand, 23106478 - 23106404
Alignment:
Q  432 gctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||||||  | ||||  |||||||||||||  |||||| |||||||||||| ||||||| |||||    
T  23106478 gctttgataggcctgagtctagcctatgaaaaaatttgcaagcctgagtctggcctatggcctttcataggccta 23106404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 425 - 587
Target Start/End: Original strand, 4422083 - 4422245
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||| ||  || |||| |||||| |||| | | ||| ||          ||||||| |||    
T  4422083 aggccaggctttgatagacctgagcctggcctacgaaaaaatttacaagccggagcttggcctgtggcctattataggctgtttttcttggcctgatctg 4422182  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    |||||||||||||||||| ||| || | ||||||| ||| ||| ||||||  |||||| ||||    
T  4422183 acctatttaaaagtctggactggcctgcaagcctacttataggcctactttatattaaggtca 4422245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 574
Target Start/End: Complemental strand, 17981397 - 17981251
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||| ||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| |||| ||    
T  17981397 ccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctggcc 17981298  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||| |||| ||| || ||||||||| ||||| | ||||||    
T  17981297 tatttaaaagcctggactggcctgaaagcctacttacaagcctactt 17981251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 620
Target Start/End: Complemental strand, 24390905 - 24390812
Alignment:
Q  527 ctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    |||||||||||||| | ||  ||  |||||||||||||| | |||||   ||||||||||| |||| |||| ||||| ||||||||||||||||    
T  24390905 ctatttaaaagtctagtctagcctaaaagcctatttacatgcctactatatattaaagtcattaaatatttaattttgtctacttttaaatagg 24390812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 49389547 - 49389604
Alignment:
Q  517 ctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||||||||||| ||| || ||||||||| ||||| | ||||||    
T  49389547 ctgacctgacctatttaaaagtctggactggcctgaaagcctacttacaagcctactt 49389604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 549
Target Start/End: Original strand, 7290767 - 7290801
Alignment:
Q  515 gcctgacctgacctatttaaaagtctggcctgacc 549  Q
    |||||||||||||| ||||||||||||||||||||    
T  7290767 gcctgacctgacctttttaaaagtctggcctgacc 7290801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 467
Target Start/End: Complemental strand, 34554010 - 34553968
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatt 467  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||    
T  34554010 aggccaggctttgataggcttgagcctggcctacgaaaaaatt 34553968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 462
Target Start/End: Complemental strand, 3097965 - 3097928
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaa 462  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  3097965 aggccaggctttgataggcctgagcctggcctacgaaa 3097928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 575
Target Start/End: Complemental strand, 20392929 - 20392876
Alignment:
Q  522 ctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||| | |||||||    
T  20392929 ctgacctatttaaaagtctggactggcctgaaagcctaattacatgcctactta 20392876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 44523470 - 44523401
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    |||| |||||||  ||| ||||||  ||||||||| | |||| | |||||||||||||||||||||||||    
T  44523470 gaaaacctatttggaggcctacttcatattaaagttattaaatagttcattttatctacttttaaatagg 44523401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 618
Target Start/End: Original strand, 22608830 - 22608922
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaata 618  Q
    ||||||||| |||  | ||||||| |||| |||||||||| | ||||||  |||| |||||  |||| | | |||||||||||||||||||||    
T  22608830 cctatttaagagtacgacctgacctgaaaacctatttacaagcctacttcatattgaagtccttaaataatccattttatctacttttaaata 22608922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 621
Target Start/End: Original strand, 23370571 - 23370662
Alignment:
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggc 621  Q
    |||||||||||||||||| ||     ||||| ||||||| ||| ||||||  ||||||| ||| ||||||||  ||||| ||||||| |||||||||    
T  23370571 acctatttaaaagtctggtct-----gaaagtctatttaaaggcctacttcatattaaaatcattaaacattcaattttgtctacttctaaataggc 23370662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 29525221 - 29525265
Alignment:
Q  518 tgacctgacctatttaaaagtctggcctgacccgaaagcctattt 562  Q
    ||||||| |||||||||||||||||| || || ||||||||||||    
T  29525221 tgacctggcctatttaaaagtctggcttggcctgaaagcctattt 29525265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 492
Target Start/End: Complemental strand, 35041875 - 35041811
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    |||| ||||||||||||||||| |||||| | ||||||||| ||  ||||||| |||||| ||||    
T  35041875 ccagactttgataggcctgagcctggcctacaaaaaaatttacaagcctgagcttggcctgtggc 35041811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 8e-69; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 11410544 - 11410745
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  11410544 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 11410643  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11410644 acctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 11410743  T
Q  625 at 626  Q
    ||    
T  11410744 at 11410745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 2732313 - 2732514
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  2732313 aggccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 2732412  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2732413 gcctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 2732512  T
Q  625 at 626  Q
    ||    
T  2732513 at 2732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 1411623 - 1411422
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||  ||||||| |||||       ||||||  |||    
T  1411623 aggccaggctttgataggcctgagcttggcctacgaaaaattttgcaggcctgagcctggcctatggtctttcataggcctatttttttggcctggtctg 1411524  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
      |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  1411523 gtctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 1411424  T
Q  625 at 626  Q
    ||    
T  1411423 at 1411422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 18533465 - 18533264
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||       ||| ||  |||    
T  18533465 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcagacctgagcctagcctatgacctttcataggcctatttttttggcttggtctg 18533366  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||||  ||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18533365 acctatttaaaagcatggtctggcctgaaagcctatttacaggtctactcactattaaagtcactaaacattccattttatctacttttaaataggctta 18533266  T
Q  625 at 626  Q
    ||    
T  18533265 at 18533264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 41892146 - 41892347
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||| |||| | ||||||||||||||  ||||||||||||||||||| ||||||| ||||         ||||| ||||    
T  41892146 aggccagactttgataggcctgagcctggcttacgaaaaaatttgcaagcctgagcctggcctatggcctttcataggccttttttttttgcctggcctg 41892245  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||||||| || |||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  41892246 gcctatttaaaagtctggcctggcctgaaagcctatttgcaggcctacttactattaaagtcactaaacattctattttatctacttttaaataggctta 41892345  T
Q  625 at 626  Q
    ||    
T  41892346 at 41892347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 439 - 626
Target Start/End: Original strand, 48214100 - 48214287
Alignment:
Q  439 taggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagt 538  Q
    |||||| |||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| |||| |||||||||||||    
T  48214100 taggccagagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctggcctatttaaaagt 48214199  T
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||| |||| || |||| |||||||||||| || |||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  48214200 ctgccctggcctgaaatcctatttacaggcctgcttactattaaagtcactaatcattccattttatctacttttaaataggcttaat 48214287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 34521345 - 34521156
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  34521345 aggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 34521246  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    ||||||||||||| ||||||||||| ||||||            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34521245 acctatttaaaagcctggcctgacctgaaagc------------ctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 34521158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 416 - 626
Target Start/End: Complemental strand, 8486019 - 8485809
Alignment:
Q  416 gttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng- 514  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||| |||| | || ||||||| | |||             
T  8486019 gttgggaataggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctcagcctagcctgtagcctttcataggtctattttttttt 8485920  T
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttta 614  Q
    ||||| ||||||| ||||||||| |||| ||| || ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||    
T  8485919 gcctggcctgacccatttaaaagcctggtctgccctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctac-ttta 8485821  T
Q  615 aataggcttaat 626  Q
    ||||||||||||    
T  8485820 aataggcttaat 8485809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 416 - 626
Target Start/End: Original strand, 31673547 - 31673762
Alignment:
Q  416 gttgggaataggccaggct-----ttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnn 510  Q
    |||||||||||||||||||     ||||||||||||||| || ||| ||||||||||| ||| | ||||| | ||||||| | ||||||| |||||        
T  31673547 gttgggaataggccaggctagactttgataggcctgagcctgacctacgaaaaaatttacaggcttgagcttagcctatgacctttcataggcctatttt 31673646  T
Q  511 nnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctact 610  Q
        | |||||||| ||||||||||||||||||||| || |||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  31673647 ttttgtctgacctggcctatttaaaagtctggcctggcctgaaaacctatttacaggcctacttactattaaagtcattaaacattccattttatctact 31673746  T
Q  611 tttaaataggcttaat 626  Q
    ||| ||||||||||||    
T  31673747 tttgaataggcttaat 31673762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 474 - 626
Target Start/End: Original strand, 37807030 - 37807182
Alignment:
Q  474 cctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctact 573  Q
    ||||||||||||||||||| ||||||| |||||       || |||  ||||||||||||||| ||||| ||| || ||||||||||||||||| |||||    
T  37807030 cctgagcctggcctatggcctttcataggcctatttttttggtctggtctgacctatttaaaaatctggtctggcctgaaagcctatttacaggcctact 37807129  T
Q  574 tactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  37807130 tactattaaagtcactaaacattccattttatttacttttaaataggcttaat 37807182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 526 - 626
Target Start/End: Original strand, 4067978 - 4068078
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaa 625  Q
    |||||||||||||||||||||||| |||||||||||||||    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4067978 cctatttaaaagtctggcctgacctgaaagcctatttacaaacatacttactattaaagtcactaaacattccattttatctacttttaaataggcttaa 4068077  T
Q  626 t 626  Q
    |    
T  4068078 t 4068078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 15943220 - 15943009
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  15943220 aggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 15943121  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt---acta---ttaa-ag---tcactaaacatttcattttatctactttta 614  Q
     |||||||||||| |||||||| || ||||||||||||||||| ||||||   | ||   |||| ||   |||||||||||| |||||||||||||||||    
T  15943120 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttttaaatatgtttaataggcctcactaaacattccattttatctactttta 15943021  T
Q  615 aataggcttaat 626  Q
    ||||||||||||    
T  15943020 aataggcttaat 15943009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 32670336 - 32670247
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32670336 gtctggcctgacctgaaagcctatttacaggcatacttaatattaaagtcactaaacattttattttatctacttttaaataggcttaat 32670247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 539 - 626
Target Start/End: Complemental strand, 14776192 - 14776105
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  14776192 ctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaataggcttaat 14776105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 539 - 626
Target Start/End: Complemental strand, 41399720 - 41399633
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  41399720 ctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggcttaat 41399633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 539 - 626
Target Start/End: Original strand, 3357075 - 3357161
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  3357075 ctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctac-tttaaataggcttaat 3357161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 14776284 - 14776203
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  14776284 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 14776203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 539 - 623
Target Start/End: Complemental strand, 36820918 - 36820834
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctt 623  Q
    |||||||| ||  |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  36820918 ctggcctggcctaaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaataggctt 36820834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 3356983 - 3357064
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||| ||||||| |||||    
T  3356983 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgaaggcctgagcctggcctatggcctttcataggccta 3357064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 12077297 - 12077372
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| |||||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  12077297 gaaagcctatgtacaggcctacttattattaaagtcactaatcattccattttatctacttttaaataggcttaat 12077372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 587
Target Start/End: Original strand, 31377388 - 31377550
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||| | |||||| ||||||||||| ||  ||| ||||| |||| |||| | | |||||||         |||||| ||||    
T  31377388 aggccaggctttgataggcctgaacctggcctacgaaaaaatttacaagcctaagcctagcctgtggcctattataagccgtttttcttggcctggcctg 31377487  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    ||||||||||||| |||| ||| || ||||||||||||||||| ||||||  |||||| ||||    
T  31377488 acctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggtca 31377550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 506
Target Start/End: Complemental strand, 41399806 - 41399731
Alignment:
Q  431 ggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||  ||||||| |||||    
T  41399806 ggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggtctttcataggccta 41399731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 559
Target Start/End: Original strand, 44848039 - 44848173
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||| |||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | |||||||||         |||||| ||||    
T  44848039 aggccaggctttgataagcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataagccgtttttctaggcctggcctg 44848138  T
Q  525 acctatttaaaagtctggcctgacccgaaagccta 559  Q
    ||||||||||||| |||| ||| || |||||||||    
T  44848139 acctatttaaaagcctggactggcctgaaagccta 44848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 429 - 506
Target Start/End: Complemental strand, 44980690 - 44980613
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||||||||||||||||| ||||||||||||||  | ||||||| |||||| || |||| || |||||    
T  44980690 caggctttgataggcctgagcttggcctacgaaaaaatttgcaagcttgagcctagcctatagcctttcgtaggccta 44980613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 12419254 - 12419106
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| ||||        |||||| ||||    
T  12419254 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggcct-ttttctaggcctggcctg 12419156  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| || |||| ||||||    
T  12419155 gcctatttaaaagcctggactggcctgaaagcctacttgcaggcctactt 12419106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 43596276 - 43596209
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    |||||||||||||||||||||||||||||||| ||||| || |  ||  |||||||||||||||||||    
T  43596276 aggccaggctttgataggcctgagcttggcctacgaaataaatcacaagcctgagcctggcctatggc 43596209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 27595649 - 27595589
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| |||||||||||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  27595649 ggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctactt 27595589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 500
Target Start/End: Complemental strand, 15757742 - 15757671
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcata 500  Q
    ||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||||| |||||    
T  15757742 caggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcttatcata 15757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 574
Target Start/End: Original strand, 32584834 - 32584990
Alignment:
Q  418 tgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcc 517  Q
    |||||||||||||||||||||||||||||||| |||||| | ||| || |  ||  ||||||||||| |||| || | ||||| |||         || |    
T  32584834 tgggaataggccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggactatagcctatcataggccgtttttctaggtc 32584933  T
Q  518 tgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    || ||||||||||||||||| |||| ||| ||  |||||||| ||||||| ||||||    
T  32584934 tggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcctactt 32584990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 618
Target Start/End: Complemental strand, 35516513 - 35516411
Alignment:
Q  521 cctgacctatttaaaag-----tctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaa 615  Q
    |||||||||||||||||     ||||||||| || ||||||||||||||||| ||||||  ||||||||||| |||| |||  ||||| | ||||| |||    
T  35516513 cctgacctatttaaaagcctggtctggcctggcctgaaagcctatttacaggcctactttatattaaagtcattaaatattcaattttgtatacttctaa 35516414  T
Q  616 ata 618  Q
    |||    
T  35516413 ata 35516411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 428 - 574
Target Start/End: Complemental strand, 46191766 - 46191620
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||||||||||||||||||||  || ||| ||||| || |  ||  | ||||||||||||||||| | ||||| |||         ||||||||||||||    
T  46191766 ccaggctttgataggcctgagtctgacctacgaaataaatcacaagcttgagcctggcctatggcctatcataggccatttttctaggcctgacctgacc 46191667  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| | ||| || ||||||||| ||||| | ||||||    
T  46191666 tatttaaaagtctagactggcctgaaagcctacttacaagcctactt 46191620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 10227881 - 10228030
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||| |||||| ||||| || |  ||  |||||| |||||||||| | | ||||| |||         ||| |||| ||    
T  10227881 aggccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatgacctatcataggccatttttctaggcatgacttg 10227980  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     ||||||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  10227981 gcctatttaaaagtctggactggcctgaaagcctacttacaggactactt 10228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 21441975 - 21441915
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| |||| |||||||||||| |||| ||| || ||||||||| ||||||||||||||    
T  21441975 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggtctactt 21441915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 41631579 - 41631519
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| ||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  41631579 ggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 41631519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 13391077 - 13391144
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||||| |||||| | ||| || |  ||  |||||||||||||||||||    
T  13391077 aggccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggcctatggc 13391144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 523 - 574
Target Start/End: Complemental strand, 26574199 - 26574148
Alignment:
Q  523 tgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||| | ||| || |||| |||||||||||||||||||    
T  26574199 tgacctatttaaaagtctagtctggcctgaaaacctatttacaggtctactt 26574148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 618
Target Start/End: Complemental strand, 31249398 - 31249307
Alignment:
Q  527 ctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaata 618  Q
    ||||||||||||| ||||| ||| |||||| |||  ||| | ||||||   |||||||||| |||| | |||||||||| ||||||||||||    
T  31249398 ctatttaaaagtccggcctaaccggaaagcttatccacatgcctactttaaattaaagtcattaaatagttcattttatatacttttaaata 31249307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 577 - 619
Target Start/End: Complemental strand, 25076922 - 25076880
Alignment:
Q  577 tattaaagtcactaaacatttcattttatctacttttaaatag 619  Q
    ||||||||||| |||| | ||||||||||||||||||||||||    
T  25076922 tattaaagtcattaaataattcattttatctacttttaaatag 25076880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 574
Target Start/End: Complemental strand, 23671156 - 23671103
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||| ||||||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  23671156 cctggcctatttaaaagtctggactggcctgaaagcctacttacaggcctactt 23671103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 574
Target Start/End: Complemental strand, 41902936 - 41902790
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||| ||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         ||||||  ||| ||    
T  41902936 ccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggtctggcc 41902837  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||| |||| ||  || ||||||||| ||||||| ||||||    
T  41902836 tatttaaaagcctggactagcctgaaagcctacttacaggcctactt 41902790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 2941136 - 2941076
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| |||| |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  2941136 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 2941076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 574
Target Start/End: Original strand, 5667188 - 5667248
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| ||||  ||||||||||| |||| |||||| ||||||||| ||||||| ||||||    
T  5667188 ggcctggcctggtctatttaaaagcctggactgacctgaaagcctacttacaggcctactt 5667248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 36820965 - 36820937
Alignment:
Q  428 ccaggctttgataggcctgagcttggcct 456  Q
    |||||||||||||||||||||||||||||    
T  36820965 ccaggctttgataggcctgagcttggcct 36820937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 44410053 - 44409997
Alignment:
Q  518 tgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||| |||||||||||||||| ||| || ||||||||| || |||| ||||||    
T  44410053 tgacctgatctatttaaaagtctggactgccctgaaagcctacttccaggcctactt 44409997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 8e-69; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 3027385 - 3027184
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||       |||||||||||    
T  3027385 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctgacctg 3027286  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3027285 acctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 3027186  T
Q  625 at 626  Q
    ||    
T  3027185 at 3027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 13276583 - 13276784
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  13276583 aggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 13276682  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  13276683 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 13276782  T
Q  625 at 626  Q
    ||    
T  13276783 at 13276784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 28891009 - 28890808
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  28891009 aggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 28890910  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28890909 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 28890810  T
Q  625 at 626  Q
    ||    
T  28890809 at 28890808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 4111485 - 4111284
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||| | ||||||| |||||       |||||| ||||    
T  4111485 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatgacctttcataggcctattattttggcctggcctg 4111386  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4111385 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 4111286  T
Q  625 at 626  Q
    ||    
T  4111285 at 4111284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 432 - 626
Target Start/End: Original strand, 27613305 - 27613499
Alignment:
Q  432 gctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatt 531  Q
    |||||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       ||| || |||  ||||||    
T  27613305 gctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcttggccttgcctatt 27613404  T
Q  532 taaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27613405 taaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 27613499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 3729153 - 3728952
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||| ||||||| |||||       |||||| | ||    
T  3729153 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctacggcatttcataggcctatttttttggcctggcttg 3729054  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||| ||| || ||||||||||||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  3729053 gcctatttaaaagtctggtctggcctgaaagcctatttacagacctacttactattaaagtcattaaacattccattttatctacttttaaataggctta 3728954  T
Q  625 at 626  Q
    ||    
T  3728953 at 3728952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 5153339 - 5153540
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||| | |||||| |||||| ||||||| ||||||| | ||||||||||||||||| ||||||| |||||       |||||| ||||    
T  5153339 aggccaggctttgataagtctgagcctggcctacgaaaaattttgcaggcttgagcctggcctatggcctttcataggcctatttttttggcctggcctg 5153438  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5153439 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 5153538  T
Q  625 at 626  Q
    ||    
T  5153539 at 5153540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 12297027 - 12296824
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng--gcctgacc 522  Q
    ||||||| |||||||||| |||||  |||||| ||||||||||||||| ||| ||||||||||||||| ||||||| |||||          ||||||||    
T  12297027 aggccagactttgataggtctgagtctggcctacgaaaaaatttgcaggcctaagcctggcctatggcctttcataggcctattttttttttgcctgacc 12296928  T
Q  523 tgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    | |||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12296927 taacctatttaaaagtctggcctggcctgaaagcctatttacaggcctaattactattaaagtcactaaacattccattttatctacttttaaataggct 12296828  T
Q  623 taat 626  Q
    ||||    
T  12296827 taat 12296824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 415 - 626
Target Start/End: Complemental strand, 1449954 - 1449756
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng 514  Q
    ||||||||||||||||||||||||||||||||||  ||| || ||||||||||| ||| |||||| |||||||||||| ||||||| |||||            
T  1449954 ggttgggaataggccaggctttgataggcctgagtctggtctacgaaaaaatttacaggcctgagtctggcctatggcctttcataggcctagt------ 1449861  T
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttta 614  Q
           ||| |||||||||||| |||| ||| ||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  1449860 -------ctggcctatttaaaagcctggtctggcctaaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctactttta 1449768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 8437673 - 8437489
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  8437673 aggccagactttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 8437574  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
                     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8437573 -----------------gcctgacctgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataagctta 8437491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 429 - 626
Target Start/End: Complemental strand, 31803213 - 31803016
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    ||||||||||||| | ||||| || ||| |||||||||||||||  |||||||||||||||||| ||||||| |||||       || ||   ||| |||    
T  31803213 caggctttgatagacttgagcctgacctacgaaaaaatttgcaggtctgagcctggcctatggcctttcataggcctatttttttggtcttgtctggcct 31803114  T
Q  529 atttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||| ||  |||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  31803113 atttaaaagcctaacctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatatacttttaaataggattaat 31803016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 523 - 626
Target Start/End: Original strand, 24848993 - 24849096
Alignment:
Q  523 tgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||||||||||||||| |||||||| ||  ||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  24848993 tgacctatttaaaagcctggcctggcctaaaaacctatttacaggcctacttactattaaagtcactaaacattcaattttatctacttttaaataggct 24849092  T
Q  623 taat 626  Q
    ||||    
T  24849093 taat 24849096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 540 - 626
Target Start/End: Original strand, 24012042 - 24012128
Alignment:
Q  540 tggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24012042 tggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 24012128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 14610622 - 14610547
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14610622 gaaaacctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 14610547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 540 - 626
Target Start/End: Original strand, 23645939 - 23646025
Alignment:
Q  540 tggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||| || |||||| ||||||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23645939 tggcctggcctgaaagcgtatttacaggcttacttactattaaagtcattaaacattccattttatctacttttaaataggcttaat 23646025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 24011954 - 24012035
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| || |||||||||||||||| ||||||| |||||    
T  24011954 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcccgagcctggcctatggcctttcataggccta 24012035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 626
Target Start/End: Original strand, 3257178 - 3257348
Alignment:
Q  466 tttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttaca 565  Q
    ||||||| ||||||||||||||||||| ||||||| |||||       |||||| | || ||||||||||||||||||||| || |||||||||||||||    
T  3257178 tttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcttggcctatttaaaagtctggcctggcctgaaagcctatttaca 3257277  T
Q  566 ggtctactt---acta---ttaa-ag---tcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    || ||||||   | ||   |||| ||   |||||||||||| ||||||||||||||||||||||| |||||    
T  3257278 ggcctacttttaaataggtttaataggcctcactaaacattccattttatctacttttaaataggtttaat 3257348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 1101211 - 1101360
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  1101211 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttttaggcctggcctg 1101310  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  1101311 gcctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 1101360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 566
Target Start/End: Original strand, 34858151 - 34858292
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||||| |||||| |||||| |||||||| |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  34858151 aggccaggctttgataggtctgagcctggcctacgaaaaaaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 34858250  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacag 566  Q
    ||||||||||||| |||| ||| || ||||||||| ||||||    
T  34858251 acctatttaaaagcctggactggcctgaaagcctacttacag 34858292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 428 - 491
Target Start/End: Complemental strand, 479277 - 479214
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatgg 491  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||| |||||| |||||||||||    
T  479277 ccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagtctggcctatgg 479214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 17156247 - 17156396
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||| |||||||||||||||| |||||| ||||||||||| ||  |||||| ||||||| |||| | | ||| |||         || |||  |||    
T  17156247 aggccaggttttgataggcctgagcctggcctacgaaaaaatttacaagcctgagtctggcctgtggcctattataggccgtttttcttggtctggtctg 17156346  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||||||||||| ||||||    
T  17156347 acctatttaaaagcctggactggcctgaaagcctatttacaggcctactt 17156396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 23645865 - 23645913
Alignment:
Q  408 caattaaggttgggaataggccaggctttgataggcctgagcttggcct 456  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  23645865 caattagggttgggaataggccaggctttgataggcctgagcctggcct 23645913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 566
Target Start/End: Complemental strand, 32187385 - 32187244
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||| |||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  32187385 aggccatgctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 32187286  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacag 566  Q
    ||||||||||||| |||| ||| || ||||||||| ||||||    
T  32187285 acctatttaaaagcctggactggcctgaaagcctacttacag 32187244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 427 - 567
Target Start/End: Complemental strand, 4174317 - 4174177
Alignment:
Q  427 gccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgac 526  Q
    ||||||||||||||||||||||| |||||| | ||| || |  ||  ||||||||||||||| ||| | ||||| |||         ||||||||||| |    
T  4174317 gccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggcctacggcctatcataggccgtttttctaggcctgacctggc 4174218  T
Q  527 ctatttaaaagtctggcctgacccgaaagcctatttacagg 567  Q
    |||||||||||||||| ||| || ||||||||| |||||||    
T  4174217 ctatttaaaagtctggactggcctgaaagcctaattacagg 4174177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 618
Target Start/End: Complemental strand, 9283910 - 9283818
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaata 618  Q
    ||||||||||||||||||||| ||   ||||||||||||||| ||| ||  ||||||||||| |||| |||  ||||| |||| |||||||||    
T  9283910 cctatttaaaagtctggcctgccctagaagcctatttacaggcctatttcatattaaagtcattaaatattcaattttgtctaattttaaata 9283818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 429 - 500
Target Start/End: Original strand, 1558633 - 1558704
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcata 500  Q
    ||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||||| |||||    
T  1558633 caggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcttatcata 1558704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 566
Target Start/End: Complemental strand, 4229932 - 4229791
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||| ||||||| | ||||| |||         |||||||||||    
T  4229932 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggtctatggcctatcataggccgtttttctaggcctgacctg 4229833  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacag 566  Q
     ||||||||||||  ||| ||| || |||| |||| ||||||    
T  4229832 gcctatttaaaagcatggactggcctgaaatcctacttacag 4229791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 13041704 - 13041647
Alignment:
Q  517 ctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||||||||||| ||||  || || ||||||||| ||||||| ||||||    
T  13041704 ctgacctgacctatttaaaagcctggattggcctgaaagcctacttacaggcctactt 13041647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 9284602 - 9284558
Alignment:
Q  412 taaggttgggaataggccaggctttgataggcctgagcttggcct 456  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||||    
T  9284602 taaggatgggaataggccagactttgataggcatgagcctggcct 9284558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 81441 - 81240
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  81441 aggccaggctttgataggcttgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 81342  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  81341 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 81242  T
Q  625 at 626  Q
    ||    
T  81241 at 81240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 5e-64; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 36054744 - 36054543
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||| ||||||| |||||       || ||| ||||    
T  36054744 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgctggcctgagcctggcctatggcctttcataggcctatttttttggtctggcctg 36054645  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36054644 gcctatttaaaagtctggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 36054545  T
Q  625 at 626  Q
    ||    
T  36054544 at 36054543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 11989052 - 11989253
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||| |||||||||||||||||| |||||  ||||||||||||||| |||||||||| |||||||| ||||||| |||||       |||||| ||||    
T  11989052 aggccatgctttgataggcctgagcctggccaacgaaaaaatttgcaggcctgagcctgacctatggcctttcataggcctattattttggcctggcctg 11989151  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||| ||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  11989152 acctatttaaaattctggcctggcctgaaagcctatttacaggcctacttaccattaaagtcactaaacattccattttatctacttttaaataggctta 11989251  T
Q  625 at 626  Q
    ||    
T  11989252 at 11989253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 36684695 - 36684896
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||| |||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  36684695 aggccacgctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 36684794  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36684795 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 36684894  T
Q  625 at 626  Q
    ||    
T  36684895 at 36684896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 12615143 - 12615339
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       || ||| ||||    
T  12615143 aggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattattttggtctggcctg 12615242  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||||     ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  12615243 gcctatttaaaagcctggcctga-----aagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaataggctta 12615337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 10921091 - 10921291
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||| ||| ||| ||||||||||| |||||||  ||||       |||||| ||||    
T  10921091 aggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctaagcttggcctatggcctttcatagacctatttttttggcctggcctg 10921190  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||| ||| |||| ||  || ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  10921191 gcctatttacaag-ctggactagcctgaaagcctatttacaggcctacatactattaaagtcactaaacattccattttatttacttttaaataggctta 10921289  T
Q  625 at 626  Q
    ||    
T  10921290 at 10921291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 33303882 - 33303678
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcc-tannnnnnnggcctgacct 523  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| ||| ||       || ||| |||    
T  33303882 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggccctattattttggtctggcct 33303783  T
Q  524 gacctatttaaaagtctggcctgacccgaaag--cctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggc 621  Q
    | |||||||||||| |||||||| || ||||   |||  ||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  33303782 ggcctatttaaaagcctggcctggcctgaaaagcccttattacaggcctacttactattaaagtcactaagcattccattttatctacttttaaataggc 33303683  T
Q  622 ttaat 626  Q
    |||||    
T  33303682 ttaat 33303678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 425 - 592
Target Start/End: Complemental strand, 7323292 - 7323125
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| |||| |||||||||||| | |||| ||||||||||||||| |||||||||||| |||||| ||||||| |||||       | |||| ||||    
T  7323292 aggccagactttaataggcctgagcctagcctacgaaaaaatttgcaggcctgagcctggcatatggcctttcataggcctatttttttgacctgtcctg 7323193  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaa 592  Q
     |||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  7323192 gcctatttaaatgtctggcctgacctgaaagcctatttacaggcctacttactattaaagtcactaaa 7323125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 537 - 626
Target Start/End: Original strand, 23950401 - 23950490
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23950401 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 23950490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 475 - 626
Target Start/End: Original strand, 30577079 - 30577230
Alignment:
Q  475 ctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||| ||||||| |||||       |||||  | ||||||||||||||| |||||||| || ||||||||||||| ||| ||||||    
T  30577079 ctgagcctggcctatggcctttcataggcctatttttttggcctagcttgacctatttaaaagcctggcctggcctgaaagcctatttagaggcctactt 30577178  T
Q  575 actattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||| |||| ||||||| |||| ||||||||||||||||||||||||    
T  30577179 actattaaaatcaccaaacattccattctatctacttttaaataggcttaat 30577230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 32551584 - 32551495
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32551584 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 32551495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 26241290 - 26241501
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  26241290 aggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 26241389  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt---acta---ttaa-ag---tcactaaacatttcattttatctactttta 614  Q
     |||||||||||| |||||||| || ||||||||||||||||| ||||||   | ||   |||| ||   |||||||||||| |||||||||||||||||    
T  26241390 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttttaaataggtttaataggcctcactaaacattccattttatctactttta 26241489  T
Q  615 aataggcttaat 626  Q
    |||||| |||||    
T  26241490 aataggtttaat 26241501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 32415375 - 32415286
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  32415375 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaatattccattttatctacttttaaataggcttaat 32415286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 505
Target Start/End: Original strand, 10954352 - 10954442
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcct 505  Q
    ||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||  |||||||||||||||||| ||||||| ||||    
T  10954352 ggttgggaataggccaggctttgataggcctgagcctggtctacgaaaaattttgcaggactgagcctggcctatggcctttcataggcct 10954442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 505
Target Start/End: Original strand, 10962357 - 10962447
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcct 505  Q
    ||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||  |||||||||||||||||| ||||||| ||||    
T  10962357 ggttgggaataggccaggctttgataggcctgagcctggtctacgaaaaattttgcaggactgagcctggcctatggcctttcataggcct 10962447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 23950311 - 23950392
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  23950311 aggccaggctttgataagcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 23950392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 32551674 - 32551593
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||| ||||||| |||||    
T  32551674 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcttgagcctggcctatggcctttcatatgccta 32551593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 429 - 575
Target Start/End: Original strand, 35056206 - 35056352
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||| ||||| ||||||||||||| | ||||| |||         ||||||| |||||||    
T  35056206 caggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgatcctggcctatggcctatcataggccgtttttttaggcctgatctgacct 35056305  T
Q  529 atttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
    ||||||||| |||| |||||| ||||||||| |||| || |||||||    
T  35056306 atttaaaagcctggactgacctgaaagcctaattacgggcctactta 35056352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 626
Target Start/End: Original strand, 10954456 - 10954541
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| || |||||| |||||||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10954456 gtctggcctggcctgaaagcttatttacaggccttct----attaaagtcactaaacatttcattttatctacttttaaataggcttaat 10954541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 537 - 626
Target Start/End: Original strand, 10962461 - 10962546
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| || |||||| |||||||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10962461 gtctggcctggcctgaaagcttatttacaggccttct----attaaagtcactaaacatttcattttatctacttttaaataggcttaat 10962546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 38600928 - 38600779
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||  ||||||||||| || |||| | | ||| |||         |||||| ||||    
T  38600928 aggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctgggctgtggcctattataggccgtttttcttggcctggcctg 38600829  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||||||||||| ||||||    
T  38600828 acctatttaaaagcctggactggcctgaaagcctatttacaggcctactt 38600779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 429 - 592
Target Start/End: Original strand, 31519166 - 31519324
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    |||||| |||||||||||||| |||||| |||||||||| |||  |||||| |||| ||||||| | ||||| |||||       |||||||| |         
T  31519166 caggctatgataggcctgagcctggcctacgaaaaaattagcaagcctgagtctggtctatggcctatcataggcctatttttttggcctgactt----- 31519260  T
Q  529 atttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaa 592  Q
    |||||||||||||||||  || ||||||||||||||||| ||||||| ||||||||||| ||||    
T  31519261 atttaaaagtctggcctagcctgaaagcctatttacaggcctacttattattaaagtcattaaa 31519324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 474 - 574
Target Start/End: Complemental strand, 16383984 - 16383884
Alignment:
Q  474 cctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctact 573  Q
    ||||||||||||||||||| ||||||| |||||       |||||| |||| |||||||||||| |||||||| || ||||||||||||||||| |||||    
T  16383984 cctgagcctggcctatggcctttcataggcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctact 16383885  T
Q  574 t 574  Q
    |    
T  16383884 t 16383884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 525 - 622
Target Start/End: Complemental strand, 35737118 - 35737021
Alignment:
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||||||||||||||||| |||||||  |||| ||||||| | ||||| ||  ||||||||||| |||| | ||||||||||||| |||||||||||||    
T  35737118 acctatttaaaagtctgacctgacctaaaagtctatttatatgtctattttatattaaagtcattaaatagttcattttatctatttttaaataggct 35737021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 8000039 - 8000188
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||| |||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         || ||| ||||    
T  8000039 aggctaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggtctggcctg 8000138  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    || |||||||||| |||| |||||| ||||||||| ||||||| ||||||    
T  8000139 acttatttaaaagcctggactgacctgaaagcctacttacaggcctactt 8000188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 14921389 - 14921538
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  14921389 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 14921488  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| || | ||| || ||||||||| ||||| | ||||||    
T  14921489 acctatttaaaagcctagactggcctgaaagcctacttacatgcctactt 14921538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 428 - 492
Target Start/End: Original strand, 40680375 - 40680439
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||| |||||||||||||| |||||| ||||||||||| ||  |||||||||||||||||||    
T  40680375 ccaggctatgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctatggc 40680439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 622
Target Start/End: Original strand, 36918701 - 36918783
Alignment:
Q  540 tggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||||||| || ||||||||||||||||| |||||||  |||||||||| ||||||| | ||||||| ||||| ||| ||||||    
T  36918701 tggcctggcctgaaagcctatttacaggcctacttatgattaaagtcattaaacatgttattttatttacttctaagtaggct 36918783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 462
Target Start/End: Original strand, 23444409 - 23444456
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaa 462  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  23444409 ggttgggaataggtcaggctttgataggcctgagcctggcctacgaaa 23444456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 430 - 574
Target Start/End: Complemental strand, 32983297 - 32983153
Alignment:
Q  430 aggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgaccta 529  Q
    |||||||||||||||||||| |||||| ||||| || |  ||  |||||||||| |||||||| | ||||| |||         || |||  ||||||||    
T  32983297 aggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggcctatcataggccgtttttctaggtctggtctgaccta 32983198  T
Q  530 tttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| ||| || ||||||||| ||||||| ||||||    
T  32983197 tttaaaagtctggactggcctgaaagcctacttacaggcctactt 32983153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 41478441 - 41478390
Alignment:
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacag 566  Q
    |||||||||||||||||||||||||||| ||| || ||||||||| ||||||    
T  41478441 gcctgacctgacctatttaaaagtctggactggcctgaaagcctacttacag 41478390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 514 - 559
Target Start/End: Original strand, 4377003 - 4377048
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagccta 559  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||    
T  4377003 ggcctgacctggcctattaaaaagtctggcctgacctgaaagccta 4377048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 521 - 618
Target Start/End: Original strand, 12939282 - 12939379
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaata 618  Q
    ||||| ||||||||||||||| | ||||| |||| ||||| ||||   ||||||   |||||||||| |||| | |||||||||||||||| ||||||    
T  12939282 cctgatctatttaaaagtctgacatgacctgaaaacctatatacaaacctacttcacattaaagtcattaaataattcattttatctacttctaaata 12939379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 585 - 626
Target Start/End: Complemental strand, 16383863 - 16383822
Alignment:
Q  585 tcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  16383863 tcactaaacattccattttatctacttttaaataggtttaat 16383822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 16365082 - 16364933
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||  |||||| ||||| || |  ||  |||||||||||| |||||| | ||||| |||         |||||| ||||    
T  16365082 aggccagactttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggcatatggcctatcataggccgtttttctaggcctggcctg 16364983  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  16364982 gcctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 16364933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 489
Target Start/End: Original strand, 44755567 - 44755631
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctat 489  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||    
T  44755567 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctat 44755631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 24580464 - 24580531
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||| ||||||||||||||||| |||||| ||||| || |  ||  |||||||||||||||||||    
T  24580464 aggccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggc 24580531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 463
Target Start/End: Original strand, 26106401 - 26106439
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaa 463  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  26106401 aggccaggctttgaaaggcctgagcttggcctacgaaaa 26106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 492
Target Start/End: Complemental strand, 7383270 - 7383205
Alignment:
Q  427 gccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||| |||||| ||||| || |  ||  |||||| ||||||||||||    
T  7383270 gccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatggc 7383205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 587
Target Start/End: Original strand, 44710196 - 44710261
Alignment:
Q  522 ctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    ||||||||||||||||||||| ||| || ||||||||| ||||| | ||||||   ||||||||||    
T  44710196 ctgacctatttaaaagtctggactgccctgaaagcctacttacatgcctacttcacattaaagtca 44710261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 44755622 - 44755675
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||| |||||||||||| |||| |||||| ||||||||| ||||||| ||||||    
T  44755622 cctggcctatttaaaagcctggactgacctgaaagcctacttacaggcctactt 44755675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 465
Target Start/End: Original strand, 12638008 - 12638048
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaa 465  Q
    ||||||||||||||||||||| ||| |||||| ||||||||    
T  12638008 aggccaggctttgataggcctaagcctggcctacgaaaaaa 12638048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 41478783 - 41478739
Alignment:
Q  418 tgggaataggccaggctttgataggcctgagcttggcctgcgaaa 462  Q
    |||||||||| ||||||||||||||||||||  |||||| |||||    
T  41478783 tgggaataggtcaggctttgataggcctgagtctggcctacgaaa 41478739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 5e-64; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 42062407 - 42062206
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||||||||||| |||||||||||||       |||||| ||||    
T  42062407 aggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataagcctatttttttggcctggcctg 42062308  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  42062307 acctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcgctaaacattccattttatctacttttaaataggctta 42062208  T
Q  625 at 626  Q
    ||    
T  42062207 at 42062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 31271534 - 31271333
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||| || ||||||||||||||||||| ||||||| |||||       || ||| |||     
T  31271534 aggccaggctttgataggcctaagcctggcctacgaaaaaatttgtaggcctgagcctggcctatggcctttcataggcctatttttttggactggccta 31271435  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31271434 gcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 31271335  T
Q  625 at 626  Q
    ||    
T  31271334 at 31271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 433 - 626
Target Start/End: Complemental strand, 4049534 - 4049341
Alignment:
Q  433 ctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctattt 532  Q
    |||||||||| ||||| ||| ||| ||||||||||||||| ||||||||||||||||| | |||||||  ||||       ||||||| ||| |||||||    
T  4049534 ctttgataggtctgagtttgacctacgaaaaaatttgcaggcctgagcctggcctatgacctttcatagacctatttttttggcctgatctggcctattt 4049435  T
Q  533 aaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  4049434 aaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaataggcttaat 4049341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 428 - 626
Target Start/End: Complemental strand, 6644255 - 6644069
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| |||||||    
T  6644255 ccaggctttaataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctgacc 6644156  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| ||| ||||||| ||||||||||            |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  6644155 tatttaaaagcctgacctgacctgaaagcctat------------ttactattaaagtcactaaacattccattttatctacttttaaataggtttaat 6644069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 42288603 - 42288407
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||  |||||| |||||||| |||||| ||||||||||||||||||| |||||||  ||||       |||||  |||     
T  42288603 aggccaggctttgataggcctgagtctggcctacgaaaaaaattgcaggcctgagcctggcctatggcctttcatagacctatttttttggcctcgcct- 42288505  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
        |||||||||||||| |||  | |||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  42288504 ----atttaaaagtctggtctggtctgaaaacctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagcctta 42288409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 4101200 - 4101403
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnn--ggcctgacc 522  Q
    ||||||||||||||||||||||||  || ||| ||||||| ||||||| |||||||||| |||||||| ||||||| |||||         ||  ||  |    
T  4101200 aggccaggctttgataggcctgagtctgacctacgaaaaattttgcaggcctgagcctgacctatggcctttcataggcctatttttttttggattggtc 4101299  T
Q  523 tgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    |  |||||||||||| |||||||| || ||||||||||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  4101300 tagcctatttaaaagcctggcctggcctgaaagcctatttacaagcctacttactattaaagttactaaacattccattttatctacttttaaataggct 4101399  T
Q  623 taat 626  Q
    ||||    
T  4101400 taat 4101403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 514 - 626
Target Start/End: Original strand, 491341 - 491453
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttt 613  Q
    |||||| |||| |||||||||||| ||| |||| || ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  491341 ggcctggcctggcctatttaaaagcctgacctggcctgaaagcctatttacaggcctacttactattaaagtcgctaaacattccattttatctactttt 491440  T
Q  614 aaataggcttaat 626  Q
    |||||||||||||    
T  491441 aaataggcttaat 491453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 7079117 - 7079192
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7079117 gaaagcctatttacaggcctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 7079192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 537 - 626
Target Start/End: Original strand, 7035275 - 7035364
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7035275 gtctggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 7035364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 12880482 - 12880666
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| | ||||||| |||||       || ||| ||||    
T  12880482 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatgacctttcataggcctatttttttggtctggcctg 12880581  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
                     ||||| || ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  12880582 -----------------gcctggcctgaaagcctatttagaggcctacttactattaaagtcactaaacattccattttatctacttttaaacaggctta 12880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 551 - 625
Target Start/End: Complemental strand, 32298621 - 32298547
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaa 625  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32298621 gaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaa 32298547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 551 - 626
Target Start/End: Original strand, 10931740 - 10931815
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  10931740 gaaagcctatttacaggtctgcttactattaaagtcactaagcattccattttatctacttttaaataggcttaat 10931815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 7079013 - 7079094
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  7079013 aggccaggctttgataggcttgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 7079094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 9163451 - 9163532
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||    
T  9163451 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggccta 9163532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 418 - 587
Target Start/End: Original strand, 34855331 - 34855500
Alignment:
Q  418 tgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcc 517  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||  |||||||||||||| |||| | | ||| ||          ||||    
T  34855331 tgggaataggccaggctttgataggcttgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggctgtttttcttggcc 34855430  T
Q  518 tgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    || ||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||  |||||| ||||    
T  34855431 tggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggtca 34855500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 491276 - 491343
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||||||||||||||    
T  491276 aggccaggctttgataggcctaagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggc 491343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 429 - 506
Target Start/End: Original strand, 7035189 - 7035266
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||| |||||  |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  7035189 caggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 7035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 569 - 626
Target Start/End: Complemental strand, 14084426 - 14084369
Alignment:
Q  569 ctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  14084426 ctacttactattatagtcactaaacattccattttatctacttttaaataggcttaat 14084369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 14949625 - 14949476
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||||| |||||| |||||| ||||||||||| ||  |||||||||||||| |||| | | ||| |||         ||||||  |||    
T  14949625 aggccaggctttgataggtctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccgtttttcttggcctggtctg 14949526  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||| |||||| ||||||||| ||||| | ||||||    
T  14949525 acctatttaaaagtctggactgacctgaaagcctacttacatgcctactt 14949476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 574
Target Start/End: Complemental strand, 27054605 - 27054449
Alignment:
Q  418 tgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcc 517  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| | |         ||||    
T  27054605 tgggaataggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggtcgtttttctaggcc 27054506  T
Q  518 tgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||  ||| |||||||||||| |||| |||||| ||||||||| ||||||| ||||||    
T  27054505 tggtctggcctatttaaaagcctggactgacctgaaagcctacttacaggcctactt 27054449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 620
Target Start/End: Complemental strand, 12724932 - 12724838
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    ||||| ||||||||||| ||| || |||||||||||||||||  |||||| ||| ||||||| ||||||||  ||||||| ||||||||||||||    
T  12724932 cctatctaaaagtctggtctggcctgaaagcctatttacaggcatacttattataaaagtcattaaacattctattttatttacttttaaatagg 12724838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 10017786 - 10017935
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||  |||||||||||||| |||  | | |||  ||         |||||| ||||    
T  10017786 aggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggtctattatagaccgtttttcttggcctggcctg 10017885  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||||||||| | ||||||    
T  10017886 acctatttaaaagcctggactggcctgaaagcctatttacatgcctactt 10017935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 18158401 - 18158550
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  18158401 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 18158500  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  18158501 gcctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 18158550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 620
Target Start/End: Complemental strand, 12786415 - 12786321
Alignment:
Q  526 cctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    ||||| ||||||||||| ||  || ||||||||||||||||   |||||| ||| ||||||| ||||||||  ||||||| ||||||||||||||    
T  12786415 cctatctaaaagtctggtctagcctgaaagcctatttacagacatacttattataaaagtcattaaacattctattttatttacttttaaatagg 12786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 542
Target Start/End: Original strand, 36113138 - 36113265
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng 514  Q
    ||||| ||||||||||||||||||||| ||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |    
T  36113138 ggttgagaataggccaggctttgatagacctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctag 36113237  T
Q  515 gcctgacctgacctatttaaaagtctgg 542  Q
    ||||| ||||||||||||||||| ||||    
T  36113238 gcctggcctgacctatttaaaagcctgg 36113265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 40084006 - 40084155
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  40084006 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 40084105  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
      ||||||||||| ||||  || || ||||||||| ||||||| ||||||    
T  40084106 gtctatttaaaagcctggattggcctgaaagcctacttacaggcctactt 40084155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 585 - 626
Target Start/End: Original strand, 9163599 - 9163640
Alignment:
Q  585 tcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  9163599 tcactaaacattccattttatctacttttaaataggtttaat 9163640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 10931641 - 10931722
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||  |||||||||||||||  |||||| ||||||||||||||| | ||||| ||||||| ||| ||| ||| |||||    
T  10931641 aggccagattttgataggcctgagtctggcctacgaaaaaatttgcaggcatgagcttggcctagggccttttataggccta 10931722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 3881083 - 3881023
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||| ||||| | ||||||    
T  3881083 ggcctgacctgacctatttaaaagcctggactggcctgaaagcctacttacaagcctactt 3881023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 11877485 - 11877552
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  |||||||||| ||||||||    
T  11877485 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggc 11877552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 17870142 - 17870075
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||| |||||||||||||||    
T  17870142 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctaagcctggcctatggc 17870075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 559
Target Start/End: Complemental strand, 13916867 - 13916737
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||| ||||||||||||||||| || | | ||||||||||| ||  |||||||||||||| |||| | | ||| |||         |||||| |||||||    
T  13916867 ccagactttgataggcctgagcctgtc-tacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccgtttttcttggcctggcctgacc 13916769  T
Q  528 tatttaaaagtctggcctgacccgaaagccta 559  Q
    ||||||||||||||| ||| || |||||||||    
T  13916768 tatttaaaagtctggactggcctgaaagccta 13916737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 575
Target Start/End: Complemental strand, 28210320 - 28210262
Alignment:
Q  517 ctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
    |||||| | ||||||||||||||||| ||| || ||||||||| ||||||| |||||||    
T  28210320 ctgaccaggcctatttaaaagtctggactggcctgaaagcctaattacaggcctactta 28210262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 18295296 - 18295349
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||||||||||||  || || ||||||||| ||||||| ||||||    
T  18295296 cctgacctatttaaaagtctggattggcctgaaagcctacttacaggcctactt 18295349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 622
Target Start/End: Original strand, 24510207 - 24510272
Alignment:
Q  557 ctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||||||||||| ||||||  ||||||||||| |||| |||  ||||| ||||||| ||||||||||    
T  24510207 ctatttacaggcctacttgatattaaagtcattaaatattcaattttgtctacttctaaataggct 24510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 5e-64; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 28793671 - 28793872
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||||  ||||       |||||| ||||    
T  28793671 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatagacctatttttttggcctggcctg 28793770  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||||| | || ||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28793771 gcctatttaaaagtctggccaggcctgaaagcctatttataggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 28793870  T
Q  625 at 626  Q
    ||    
T  28793871 at 28793872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 39391073 - 39391274
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  39391073 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattattttggcctggcctg 39391172  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| ||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  39391173 gcctatttaaaagcctggcctggtctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatatgctta 39391272  T
Q  625 at 626  Q
    ||    
T  39391273 at 39391274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 427 - 626
Target Start/End: Original strand, 33249437 - 33249636
Alignment:
Q  427 gccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgac 526  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||| ||||||| |||||       ||||||  |||||    
T  33249437 gccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggtctgac 33249536  T
Q  527 ctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  33249537 ctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggcttaat 33249636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 428 - 626
Target Start/End: Complemental strand, 40489145 - 40488947
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||||||||||||||||||||| |||| | ||||||||||| ||| ||||||||||||||||||| ||||||| || ||       ||||||||||| ||    
T  40489145 ccaggctttgataggcctgagcctggcttacgaaaaaatttccaggcctgagcctggcctatggcctttcataggcttatttttttggcctgacctggcc 40489046  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  40489045 tatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtttaat 40488947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 1782787 - 1782586
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||| ||||||| |||||       |||||| ||||    
T  1782787 aggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcataggcctatttttttggcctggcctg 1782688  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  1782687 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 1782588  T
Q  625 at 626  Q
    ||    
T  1782587 at 1782586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 20647898 - 20647697
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||  |||||||  |||||||||||||||||| ||||||| |||||       |||||| ||||    
T  20647898 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggtctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 20647799  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  20647798 acctatttaaaagtctggcctggcctgaaagtctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaataggctta 20647699  T
Q  625 at 626  Q
    ||    
T  20647698 at 20647697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 34422769 - 34422568
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||||||| |||| |||||| ||||||||| ||||| ||||||||||||||||||| ||||| | |||||       |||||| ||||    
T  34422769 aggccaggctttgataggcccgagcctggcctacgaaaaaatatgcaggcctgagcctggcctatggcctttcacaggcctatttttttggcctggcctg 34422670  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  34422669 gcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcattaaacattccattttatctacttttaaataggctta 34422570  T
Q  625 at 626  Q
    ||    
T  34422569 at 34422568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 40000882 - 40000681
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  40000882 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 40000783  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||| ||| |||| ||| || ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  40000782 gcctatttataagcctggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaataggctta 40000683  T
Q  625 at 626  Q
    ||    
T  40000682 at 40000681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 415 - 626
Target Start/End: Original strand, 25536849 - 25537060
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng 514  Q
    ||||||||||||| ||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||| ||||| | ||||||| |||||       |    
T  25536849 ggttgggaataggtcaggctttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctggtctatgacctttcataggcctatttttttg 25536948  T
Q  515 gcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctactttta 614  Q
    || |||||||||||||||||||| |||| ||| || ||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  25536949 gcatgacctgacctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttattattaaagtcactaaacattccattttatctactttta 25537048  T
Q  615 aataggcttaat 626  Q
    |||||| |||||    
T  25537049 aataggtttaat 25537060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 52174908 - 52174707
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||  |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  52174908 aggccaggctttgataggcctgagtctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 52174809  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  52174808 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttagctacttttaaataggctta 52174709  T
Q  625 at 626  Q
    ||    
T  52174708 at 52174707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 54650464 - 54650665
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||||||| |||||| |||||| ||||||| ||||||| ||||||||||||||||||| ||| ||| |||||       || ||| ||||    
T  54650464 aggccaggctttgataggtctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggccttttataggcctatttttttggtctggcctg 54650563  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| ||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  54650564 gcctatttaaaagcctgccctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 54650663  T
Q  625 at 626  Q
    ||    
T  54650664 at 54650665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 415 - 626
Target Start/End: Original strand, 47844508 - 47844724
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnng 514  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||  |||||||||||||||||| ||||||| |||||       |    
T  47844508 ggttgggaataggccaagctttgataggcctgagtctggcctacgaaaaaatttgcaggtctgagcctggcctatggcctttcataggcctatttttttg 47844607  T
Q  515 gcctgacctgacctatttaaaagtctggcctgaccc-----gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctac 609  Q
    |||||| ||| |||||||||||| || ||||  ||      ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  47844608 gcctgatctggcctatttaaaagcctagcctagcctagcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctac 47844707  T
Q  610 ttttaaataggcttaat 626  Q
    |||||||||||||||||    
T  47844708 ttttaaataggcttaat 47844724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 428 - 626
Target Start/End: Complemental strand, 47597184 - 47596986
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacc 527  Q
    |||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||||||||||| ||||||| |||||       |||||| |||| ||    
T  47597184 ccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctggcc 47597085  T
Q  528 tatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| |||| ||| || ||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  47597084 tatttaaaagcctggtctggcctgaaagcctaattacaggcctacttactattaaagtcactaaacattcgattttatctacttttaaataggcttaat 47596986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 46068009 - 46068210
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| || |||||||| ||||| | |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||       || |||  |||    
T  46068009 aggccagactatgataggcttgagcctagcctacgaaaaaatttgcaggcctgagcctggcctatggcttttcataggcctatttttttggtctggtctg 46068108  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
      ||||||||||| |||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46068109 ggctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggctta 46068208  T
Q  625 at 626  Q
    ||    
T  46068209 at 46068210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 33069526 - 33069336
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||| |||||| |||||||||||||||           |||||| || ||||||| |||||       |||||||||||    
T  33069526 aggccagactttgataggcctgagcctggcctacgaaaaaatttgcag-----------gcctatagcctttcataggcctatttttttggcctgacctg 33069438  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||||||||||||| || ||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33069437 acctatttaaaagtctggcctggcctgaaagcctatttacaggcctccttactattaaagtcactaaacattccattttatctacttttaaataggctta 33069338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 55008114 - 55008315
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| |||||||||| |||||| || ||| ||||||||||||||| |||||||||||| | |||| ||||||| |||||       || | |  |||    
T  55008114 aggccagactttgataggtctgagcctgtcctacgaaaaaatttgcaggcctgagcctggcttgtggcctttcataggcctatttttttggtcaggtctg 55008213  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
    |||||||||||||| ||| ||| || ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  55008214 acctatttaaaagtttggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattctattttatctacttttaaataggctta 55008313  T
Q  625 at 626  Q
    ||    
T  55008314 at 55008315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 626
Target Start/End: Complemental strand, 40000584 - 40000435
Alignment:
Q  477 gagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttac 576  Q
    |||||||||||||||| ||||||| |||||       |||||| |||| |||||||| ||| |||| ||| || ||||||||||||||||| ||||||||    
T  40000584 gagcctggcctatggcctttcataggcctatttttttggcctggcctggcctatttataagcctggtctggcctgaaagcctatttacaggcctacttac 40000485  T
Q  577 tattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  40000484 tattaaagtcactaaacattctattttatctacttttaaataggcttaat 40000435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 521 - 626
Target Start/End: Original strand, 41873501 - 41873606
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    |||| ||||||||||||| ||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41873501 cctggcctatttaaaagtatggcctggcctgaaagtctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaatagg 41873600  T
Q  621 cttaat 626  Q
     |||||    
T  41873601 tttaat 41873606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 530 - 626
Target Start/End: Original strand, 53002269 - 53002365
Alignment:
Q  530 tttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||||| ||| || ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53002269 tttaaaagtctggtctggcctgaaagcctatttacatgcctacttactattaaagtcactaaatatttcattttatctacttttaaataggcttaat 53002365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 539 - 626
Target Start/End: Original strand, 19421077 - 19421164
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19421077 ctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 19421164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 539 - 626
Target Start/End: Original strand, 29076979 - 29077066
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29076979 ctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 29077066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 466 - 626
Target Start/End: Original strand, 46116481 - 46116641
Alignment:
Q  466 tttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttaca 565  Q
    |||||||  |||||||||||||||||| ||||||| |||||        |||||  ||| |||||||||||| ||| ||||||| |||||||||||||||    
T  46116481 tttgcaggtctgagcctggcctatggcctttcataggcctatttttttagcctggtctggcctatttaaaaggctgacctgacctgaaagcctatttaca 46116580  T
Q  566 ggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
       ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  46116581 tacctacttattattaaagtcattaaacatttcattttatctacttctaaataggcttaat 46116641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 34705412 - 34705263
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| | |||   ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  34705412 aggccaggctttgataggcctgagcctggcctacaaaattttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 34705313  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||||||| || ||||||||||||||||| ||||||    
T  34705312 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 34705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 540 - 626
Target Start/End: Original strand, 13596272 - 13596358
Alignment:
Q  540 tggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  13596272 tggcctggcctgaaagcctatttacaggcctacttactattaaagttactaaacattccattttatctacttttaaataggcttaat 13596358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 537 - 626
Target Start/End: Original strand, 34636450 - 34636539
Alignment:
Q  537 gtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  34636450 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagtcatcaaacattccattttatctacttttaaataggcttaat 34636539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 538 - 626
Target Start/End: Complemental strand, 39171430 - 39171342
Alignment:
Q  538 tctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  39171430 tctggtctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtttaat 39171342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 551 - 626
Target Start/End: Complemental strand, 24540980 - 24540905
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24540980 gaaagcctattcacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 24540905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 539 - 626
Target Start/End: Original strand, 33370525 - 33370612
Alignment:
Q  539 ctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| || ||||||||||||||||  ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  33370525 ctggcctggcctgaaagcctatttacagacctacttactattaaagtcattaaacattccattttatctacttttaaataggcttaat 33370612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 19420985 - 19421066
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  19420985 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 19421066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 506
Target Start/End: Complemental strand, 24541079 - 24540998
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  24541079 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 24540998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 429 - 506
Target Start/End: Original strand, 34636364 - 34636441
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  34636364 caggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 34636441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 575
Target Start/End: Complemental strand, 26994862 - 26994712
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||| | ||||| |||         |||||| ||||    
T  26994862 aggccagactttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctg 26994763  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
    ||||||||||||| |||| ||| || ||||| ||| ||||| | |||||||    
T  26994762 acctatttaaaagcctggactggcctgaaagtctaattacaagcctactta 26994712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 29076887 - 29076968
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| ||||||| |||||    
T  29076887 aggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggccta 29076968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 587
Target Start/End: Complemental strand, 41129824 - 41129662
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||  |||||||||||||| |||| | | ||| |||         |||||| ||||    
T  41129824 aggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccgtttttcttggcctggcctg 41129725  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    ||||||||||||| |||| ||| || ||||||||| ||||||| ||||||  |||||| ||||    
T  41129724 acctatttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggtca 41129662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 13596184 - 13596265
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||  |||||| ||||||| |||||    
T  13596184 aggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaagcctgagcctggtatatggcctttcataggccta 13596265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 4357125 - 4356976
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||||||||| ||  ||| ||||| |||| |||  | | |||||||         |||||| ||||    
T  4357125 aggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctaagcctagcctgtggtctattataagccgtttttcttggcctggcctg 4357026  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||||||||||| ||||||    
T  4357025 acctatttaaaagcctggactggcctgaaagcctatttacaggcctactt 4356976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 428 - 492
Target Start/End: Original strand, 39889347 - 39889411
Alignment:
Q  428 ccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggc 492  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||    
T  39889347 ccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggc 39889411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 33370433 - 33370514
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||||||||||||||||||||  |||| | ||||||||||||||| ||| ||||||||||||| | ||||||| |||||    
T  33370433 aggccaggctttgataggcctgagtctggcatacgaaaaaatttgcaggcctaagcctggcctatgacctttcataggccta 33370514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 425 - 587
Target Start/End: Complemental strand, 46136465 - 46136303
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| ||  |||||||||||||| |||| | | ||| |||         ||||||  |||    
T  46136465 aggccaggctttgataggcctgagtctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccgtttttcttggcctggtctg 46136366  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    |||||||||||||||||| ||| || ||||||||| ||||| | ||||||  |||||| ||||    
T  46136365 acctatttaaaagtctggactggcctgaaagcctacttacatgcctactttatattaaggtca 46136303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 9338363 - 9338214
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||||||||| || |  ||  ||||||||||||||||||| | ||||| | |         |||||| ||||    
T  9338363 aggccaggctttgataggcctgagcctggcctgcgaaataaatcacaagcctgagcctggcctatggcctatcataggtcgtttttctaggcctggcctg 9338264  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
     |||||||||||| |||| |||||| ||||||||| ||||| | ||||||    
T  9338263 gcctatttaaaagcctggactgacctgaaagcctacttacaagcctactt 9338214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 24133779 - 24133928
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         || ||| ||||    
T  24133779 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggtctggcctg 24133878  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||| || ||||||||| ||||||| ||||||    
T  24133879 acctatttaaaagcctggactggcctgaaagcctacttacaggcctactt 24133928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 626
Target Start/End: Original strand, 25537108 - 25537157
Alignment:
Q  577 tattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  25537108 tattaaagtcactaaacattccattttatctacttttaaataggtttaat 25537157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 418 - 564
Target Start/End: Original strand, 50638499 - 50638645
Alignment:
Q  418 tgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcc 517  Q
    |||||||||||||||||||| ||||||||||| | |||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         ||||    
T  50638499 tgggaataggccaggctttggtaggcctgagcctagcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcc 50638598  T
Q  518 tgacctgacctatttaaaagtctggcctgacccgaaagcctatttac 564  Q
    ||  ||| ||||||||||||||||| |||||| ||||||||| ||||    
T  50638599 tggtctggcctatttaaaagtctggactgacctgaaagcctacttac 50638645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 415 - 500
Target Start/End: Original strand, 53002168 - 53002253
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcata 500  Q
    |||||| |||| || ||||||||||||| |||||| |||||| | |||||||||||||  |||||| ||||||||||| |||||||    
T  53002168 ggttggaaataagctaggctttgataggtctgagcctggcctacaaaaaaatttgcaggtctgagcttggcctatggcctttcata 53002253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 566
Target Start/End: Original strand, 42294132 - 42294273
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| ||||| || |  ||  |||||||||| |||||||| | ||||| |||         |||||| ||||    
T  42294132 aggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggcctatcataggccgtttttctaggcctggcctg 42294231  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacag 566  Q
     |||||||||||| |||| |||||| ||||||||| ||||||    
T  42294232 gcctatttaaaagcctggactgacctgaaagcctacttacag 42294273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 551 - 606
Target Start/End: Complemental strand, 18984209 - 18984154
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatc 606  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  18984209 gaaagcctatttacagacctacttactattaaagtccctaaacattccattttatc 18984154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 559
Target Start/End: Original strand, 51302383 - 51302518
Alignment:
Q  424 taggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacct 523  Q
    |||||||||||||||||||||||||| |||||| ||||| || |  ||  ||||||||||||||||||| | ||||| |||         |||||| |||    
T  51302383 taggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcct 51302482  T
Q  524 gacctatttaaaagtctggcctgacccgaaagccta 559  Q
    | |||||||||||| |||| ||| || |||||||||    
T  51302483 ggcctatttaaaagcctggactggcctgaaagccta 51302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 559
Target Start/End: Original strand, 4481672 - 4481806
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||||||||||| |||||||||| |||||| ||||||||| | ||  ||| ||||||||||||||| | ||||| |||         |||||| ||||    
T  4481672 aggccaggctttgaaaggcctgagcctggcctacgaaaaaatatacaagcctaagcctggcctatggcctatcataggccgtttttcttggcctggcctg 4481771  T
Q  525 acctatttaaaagtctggcctgacccgaaagccta 559  Q
     |||||| ||||| |||||||| || |||||||||    
T  4481772 gcctattaaaaagcctggcctggcctgaaagccta 4481806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 521 - 574
Target Start/End: Complemental strand, 43010240 - 43010187
Alignment:
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||    
T  43010240 cctgacctatttaaaagtctggactgacctgaaagcctacttacaggactactt 43010187  T

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Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 2222185 - 2222110
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcata 500  Q
    ||||||||||||||||||||||||| |||||| ||||||  || |||  ||| ||||||||||| ||| |||||||    
T  2222185 aggccaggctttgataggcctgagcctggcctacgaaaattttagcaagcctaagcctggcctacggcctttcata 2222110  T

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Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 564
Target Start/End: Complemental strand, 46181953 - 46181818
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    ||||||||||||||  ||||| || ||| ||||||||||||||| |||||| ||| |||||||  ||||||| |||||       || |||  |||||||    
T  46181953 caggctttgataggtttgagcctgacctacgaaaaaatttgcaggcctgagtctgacctatggtctttcataggcctatttttttggtctggtctgacct 46181854  T
Q  529 atttaaaagtctggcctgacccgaaagcctatttac 564  Q
    ||||||||| ||| | || |  ||||||||||||||    
T  46181853 atttaaaagcctgacttggcatgaaagcctatttac 46181818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 585 - 626
Target Start/End: Complemental strand, 34705242 - 34705201
Alignment:
Q  585 tcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  34705242 tcactaaacattccattttatctacttttaaataggtttaat 34705201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 574
Target Start/End: Complemental strand, 31406021 - 31405872
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    |||||| |||||||||||||| ||| |||||| ||||||||||| ||  |||||| ||||||| |||| | | ||| |||          ||||| ||||    
T  31406021 aggccatgctttgataggcctaagcctggcctacgaaaaaatttacaagcctgagtctggcctgtggcctattataggccgtttttcttagcctggcctg 31405922  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    ||||||||||||| |||| ||  || ||||||||| ||||||| ||||||    
T  31405921 acctatttaaaagcctggactagcctgaaagcctacttacaggcctactt 31405872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 574
Target Start/End: Complemental strand, 35761521 - 35761461
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactt 574  Q
    |||||| |||||||||||||||||||||| | | || ||||||||| ||||||| ||||||    
T  35761521 ggcctggcctgacctatttaaaagtctggaccggcctgaaagcctacttacaggcctactt 35761461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 575
Target Start/End: Complemental strand, 24120293 - 24120235
Alignment:
Q  517 ctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
    ||||||||||||||||||||| |||| |||  | ||||||||| ||||||| |||||||    
T  24120293 ctgacctgacctatttaaaagcctggactggtctgaaagcctaattacaggcctactta 24120235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 620
Target Start/End: Complemental strand, 36672836 - 36672743
Alignment:
Q  527 ctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaatagg 620  Q
    |||||||||||| |||||||||| |||||| |||||||| | ||||||   ||||| || | |||| |||  ||||| ||||||| ||||||||    
T  36672836 ctatttaaaagtttggcctgacctgaaagcatatttacatgcctactttaaattaacgtaattaaatattcaattttgtctacttctaaatagg 36672743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 39171479 - 39171439
Alignment:
Q  466 tttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    ||||||| ||||||||||||||||||| ||||||| |||||    
T  39171479 tttgcaggcctgagcctggcctatggcctttcataggccta 39171439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 53002072 - 53002128
Alignment:
Q  415 ggttgggaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgca 471  Q
    |||||| ||||||| ||||||||||||| |||||  |||||| | ||||||||||||    
T  53002072 ggttggaaataggctaggctttgataggtctgagtctggcctacaaaaaaatttgca 53002128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 117; Significance: 3e-59; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 425 - 626
Target Start/End: Original strand, 40923 - 41123
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||| |||||| |||||   ||||||| ||||||||||||||||||| ||||||| |||||       |||||| ||||    
T  40923 aggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctg 41022  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41023 gcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaaca-ttcattttatctacttttaaataggctta 41121  T
Q  625 at 626  Q
    ||    
T  41122 at 41123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 429 - 622
Target Start/End: Original strand, 40001 - 40195
Alignment:
Q  429 caggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacct 528  Q
    ||||||||||||||| ||||| |||||| |||||||| |||||| ||||||||||||||||||| ||||||| |||||       ||| || ||||||||    
T  40001 caggctttgataggcttgagcctggcctacgaaaaaaattgcaggcctgagcctggcctatggcctttcataggcctatttttttggcatggcctgacct 40100  T
Q  529 atttaaaagtctggcctgacccgaaa-gcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||||||||| |||||||| || |||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40101 atttaaaagcctggcctggcctgaaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggct 40195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 93; Significance: 6e-45; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 425 - 626
Target Start/End: Complemental strand, 14440 - 14240
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctg 524  Q
    ||||||||||||||||||||||||  |||||| ||||||  ||||||| |||||||||| |||||| | ||||||| |||||       |||||| ||||    
T  14440 aggccaggctttgataggcctgagtctggcctacgaaaatttttgcaggcctgagcctgccctatgtcctttcataggcctatttttttggcctggcctg 14341  T
Q  525 acctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggctta 624  Q
     |||||||||||  |||| |||||| ||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  14340 gcctatttaaaac-ctggtctgacctgaaagcctaattacaggcctacttactattaaagtctctaaacattccattttatctacttttaaatagtctta 14242  T
Q  625 at 626  Q
    ||    
T  14241 at 14240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 462 - 626
Target Start/End: Original strand, 15625 - 15791
Alignment:
Q  462 aaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnn--ggcctgacctgacctatttaaaagtctggcctgacccgaaagccta 559  Q
    |||||||||||  |||||||||||||||||| ||||||| |||||         ||| || |||| |||||||||||| |||||||| || |||||||||    
T  15625 aaaatttgcagggctgagcctggcctatggcctttcataggcctatttttttttggcttggcctggcctatttaaaagcctggcctggcctgaaagccta 15724  T
Q  560 tttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15725 tttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggcttaat 15791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 467 - 626
Target Start/End: Complemental strand, 218331 - 218172
Alignment:
Q  467 ttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacag 566  Q
    |||||| |||||| |||||||||||| ||||||| |||||       ||  ||  ||| ||||||||||||||||||||| || ||||||||||||||||    
T  218331 ttgcaggcctgagtctggcctatggcctttcataggcctatttttttggtttggtctggcctatttaaaagtctggcctggcctgaaagcctatttacag 218232  T
Q  567 gtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  218231 gcttatttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 218172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 474 - 626
Target Start/End: Original strand, 24849 - 25001
Alignment:
Q  474 cctgagcctggcctatggcttttcataagcctannnnnnnggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctact 573  Q
    ||||||||||||||||||| |||||||  ||||       |||||   ||| |||||||||||| |||| |||||| ||||||||||||||||| |||||    
T  24849 cctgagcctggcctatggcctttcatagacctatttttttggcctagtctggcctatttaaaagcctggtctgacctgaaagcctatttacaggcctact 24948  T
Q  574 tactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  24949 tactattaaagccactaaacattccattttatctacttttaaataggcttaat 25001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 538 - 626
Target Start/End: Original strand, 1325 - 1413
Alignment:
Q  538 tctggcctgacccgaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggcttaat 626  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  1325 tctggcctggcctgaaagcctatttacaggcctacttactattaaagtcactaaacattccattttatctacttttaaataggtttaat 1413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 1234 - 1315
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagccta 506  Q
    |||||||||||||||||| |||||| |||||| || ||   ||||||| || |||||||||||||||| ||||||| |||||    
T  1234 aggccaggctttgataggtctgagcctggcctacggaattttttgcaggccagagcctggcctatggcctttcataggccta 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 421 - 575
Target Start/End: Complemental strand, 1892 - 1738
Alignment:
Q  421 gaataggccaggctttgataggcctgagcttggcctgcgaaaaaatttgcagacctgagcctggcctatggcttttcataagcctannnnnnnggcctga 520  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||| | ||||| |||         |||||||    
T  1892 gaataggccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcataggccgtttttttaggcctga 1793  T
Q  521 cctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctactta 575  Q
    |||| |||||||||||| |||| ||| || ||||||||| ||| | |||||||||    
T  1792 cctggcctatttaaaagcctggactggcctgaaagcctaattataagtctactta 1738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 622
Target Start/End: Original strand, 35923 - 35993
Alignment:
Q  551 gaaagcctatttacaggtctacttactattaaagtcactaaacatttcattttatctacttttaaataggct 622  Q
    ||||||||||||||| | ||||||| ||||||||||  |||||||| |||||||| ||||| ||||||||||    
T  35923 gaaagcctatttacaagcctacttattattaaagtc-ttaaacattccattttatttacttctaaataggct 35993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 587
Target Start/End: Original strand, 10719 - 10792
Alignment:
Q  514 ggcctgacctgacctatttaaaagtctggcctgacccgaaagcctatttacaggtctacttactattaaagtca 587  Q
    |||||| ||||||||||||||||| |||| ||| || ||||||||| ||||||  ||||||  |||||| ||||    
T  10719 ggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacagacctactttatattaaggtca 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 10661 - 10693
Alignment:
Q  425 aggccaggctttgataggcctgagcttggcctg 457  Q
    ||||||||||||||||||||||||| |||||||    
T  10661 aggccaggctttgataggcctgagcctggcctg 10693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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