View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20001_low_16 (Length: 357)

Name: NF20001_low_16
Description: NF20001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20001_low_16
NF20001_low_16
[»] chr2 (54 HSPs)
chr2 (118-326)||(33220701-33220914)
chr2 (17-104)||(37720207-37720293)
chr2 (17-108)||(8851147-8851238)
chr2 (17-104)||(8851546-8851633)
chr2 (25-109)||(7664246-7664329)
chr2 (17-104)||(7664637-7664724)
chr2 (17-107)||(26692784-26692874)
chr2 (28-108)||(26692395-26692474)
chr2 (17-100)||(6324924-6325007)
chr2 (17-104)||(16910830-16910917)
chr2 (25-104)||(17850981-17851058)
chr2 (25-104)||(18750099-18750176)
chr2 (17-109)||(41790876-41790968)
chr2 (25-109)||(5378659-5378742)
chr2 (17-108)||(5793446-5793537)
chr2 (17-104)||(6325311-6325398)
chr2 (17-104)||(16911233-16911319)
chr2 (17-107)||(41790491-41790580)
chr2 (25-109)||(5379932-5380015)
chr2 (17-107)||(19141813-19141901)
chr2 (17-101)||(7979573-7979655)
chr2 (17-104)||(19141447-19141533)
chr2 (28-109)||(2639458-2639538)
chr2 (28-109)||(26841585-26841665)
chr2 (28-104)||(2638823-2638898)
chr2 (17-104)||(7979967-7980053)
chr2 (17-84)||(17851366-17851433)
chr2 (28-105)||(7591203-7591279)
chr2 (52-109)||(30190921-30190978)
chr2 (28-104)||(18296079-18296154)
chr2 (52-104)||(20347463-20347515)
chr2 (28-104)||(26842214-26842289)
chr2 (17-107)||(18749726-18749815)
chr2 (28-104)||(7591826-7591901)
chr2 (52-104)||(11883626-11883678)
chr2 (52-104)||(11883925-11883977)
chr2 (52-104)||(30191224-30191276)
chr2 (28-104)||(38490817-38490891)
chr2 (52-108)||(40469728-40469784)
chr2 (53-104)||(6171456-6171507)
chr2 (53-104)||(18296693-18296744)
chr2 (53-104)||(24832334-24832385)
chr2 (52-106)||(15920779-15920833)
chr2 (53-107)||(18055316-18055370)
chr2 (55-104)||(6495723-6495772)
chr2 (53-109)||(20347161-20347217)
chr2 (52-108)||(32673142-32673197)
chr2 (52-106)||(18055167-18055222)
chr2 (52-106)||(43495483-43495537)
chr2 (54-104)||(6495470-6495519)
chr2 (55-109)||(29230280-29230334)
chr2 (55-105)||(29343583-29343633)
chr2 (55-104)||(6171159-6171207)
chr2 (60-104)||(43495312-43495356)
[»] chr7 (44 HSPs)
chr7 (17-107)||(18863967-18864057)
chr7 (17-109)||(20418886-20418978)
chr7 (17-104)||(20419288-20419375)
chr7 (17-104)||(22740159-22740246)
chr7 (17-110)||(10533031-10533124)
chr7 (17-109)||(9034865-9034958)
chr7 (17-109)||(37889223-37889315)
chr7 (17-109)||(42418992-42419084)
chr7 (17-104)||(3205057-3205144)
chr7 (17-104)||(9035257-9035344)
chr7 (17-104)||(17156970-17157057)
chr7 (17-104)||(37888836-37888923)
chr7 (17-104)||(37972360-37972447)
chr7 (17-106)||(22740555-22740643)
chr7 (17-104)||(13744197-13744283)
chr7 (17-109)||(37971958-37972050)
chr7 (17-104)||(13741560-13741647)
chr7 (17-104)||(48359323-48359409)
chr7 (17-104)||(29292925-29293012)
chr7 (17-104)||(38826877-38826964)
chr7 (17-104)||(3204672-3204757)
chr7 (17-104)||(29293310-29293397)
chr7 (24-108)||(36527383-36527465)
chr7 (17-110)||(18864366-18864458)
chr7 (17-104)||(36527762-36527849)
chr7 (17-104)||(42418594-42418681)
chr7 (28-104)||(44599492-44599567)
chr7 (28-104)||(44600111-44600186)
chr7 (17-103)||(48359622-48359707)
chr7 (52-109)||(9412324-9412381)
chr7 (28-109)||(13863311-13863391)
chr7 (52-104)||(3687655-3687707)
chr7 (28-104)||(13863933-13864007)
chr7 (42-104)||(16198967-16199028)
chr7 (52-104)||(9412026-9412078)
chr7 (52-104)||(13772900-13772952)
chr7 (29-109)||(46816288-46816367)
chr7 (52-104)||(3687356-3687409)
chr7 (28-109)||(8643742-8643822)
chr7 (52-107)||(27096341-27096395)
chr7 (52-107)||(27181908-27181962)
chr7 (54-106)||(6908485-6908536)
chr7 (52-104)||(8953888-8953939)
chr7 (53-109)||(13772639-13772695)
[»] chr4 (55 HSPs)
chr4 (17-109)||(39744429-39744521)
chr4 (17-104)||(169403-169490)
chr4 (17-104)||(293181-293268)
chr4 (17-104)||(9023644-9023731)
chr4 (17-104)||(9380310-9380397)
chr4 (17-104)||(25161881-25161968)
chr4 (17-104)||(28196737-28196824)
chr4 (17-104)||(32703614-32703701)
chr4 (17-109)||(9380705-9380797)
chr4 (17-109)||(28196344-28196436)
chr4 (17-104)||(43292040-43292127)
chr4 (25-104)||(4239339-4239417)
chr4 (17-109)||(9023242-9023334)
chr4 (17-104)||(23540216-23540303)
chr4 (17-104)||(169016-169104)
chr4 (25-109)||(292780-292863)
chr4 (17-104)||(26207710-26207797)
chr4 (17-104)||(32703228-32703315)
chr4 (17-104)||(43292321-43292408)
chr4 (17-109)||(39744028-39744120)
chr4 (17-104)||(26207364-26207450)
chr4 (17-104)||(39086587-39086674)
chr4 (17-104)||(39912057-39912142)
chr4 (25-104)||(48405965-48406042)
chr4 (17-107)||(48406349-48406438)
chr4 (25-109)||(23539839-23539920)
chr4 (17-89)||(44468887-44468959)
chr4 (17-108)||(12757766-12757856)
chr4 (28-107)||(36096451-36096529)
chr4 (17-89)||(25162277-25162349)
chr4 (28-109)||(50678777-50678857)
chr4 (17-85)||(39912451-39912519)
chr4 (28-109)||(56505691-56505771)
chr4 (52-104)||(13198905-13198957)
chr4 (28-104)||(36095820-36095895)
chr4 (28-104)||(50679400-50679475)
chr4 (53-104)||(24775783-24775834)
chr4 (52-109)||(16555513-16555570)
chr4 (28-109)||(45830172-45830252)
chr4 (52-104)||(22681578-22681629)
chr4 (28-108)||(43050606-43050685)
chr4 (28-104)||(43051228-43051303)
chr4 (52-103)||(49178815-49178866)
chr4 (52-104)||(8181994-8182047)
chr4 (17-109)||(12758168-12758259)
chr4 (54-106)||(24775642-24775695)
chr4 (52-104)||(18077201-18077253)
chr4 (53-104)||(16555817-16555868)
chr4 (52-106)||(13198604-13198658)
chr4 (172-237)||(18058596-18058662)
chr4 (55-109)||(22681881-22681935)
chr4 (52-109)||(3930479-3930535)
chr4 (53-109)||(5205986-5206042)
chr4 (52-104)||(11241392-11241444)
chr4 (28-104)||(11529171-11529246)
[»] chr1 (68 HSPs)
chr1 (17-109)||(28634121-28634213)
chr1 (17-108)||(48104677-48104768)
chr1 (17-107)||(50430045-50430135)
chr1 (24-109)||(32163015-32163099)
chr1 (17-104)||(9347129-9347216)
chr1 (17-104)||(26814697-26814784)
chr1 (25-109)||(26815092-26815175)
chr1 (17-107)||(46823843-46823933)
chr1 (17-108)||(999111-999201)
chr1 (17-104)||(20371316-20371403)
chr1 (17-104)||(20480171-20480257)
chr1 (17-104)||(21687028-21687115)
chr1 (17-108)||(42611184-42611275)
chr1 (17-104)||(48105080-48105167)
chr1 (17-104)||(50526436-50526523)
chr1 (17-107)||(42611578-42611668)
chr1 (17-109)||(28633718-28633810)
chr1 (17-104)||(13918449-13918536)
chr1 (17-104)||(27172119-27172205)
chr1 (17-104)||(50615585-50615671)
chr1 (17-104)||(50623413-50623499)
chr1 (17-104)||(27172506-27172592)
chr1 (27-104)||(6703869-6703945)
chr1 (17-109)||(9347515-9347606)
chr1 (17-104)||(4692397-4692484)
chr1 (17-104)||(13918831-13918918)
chr1 (25-104)||(20371043-20371119)
chr1 (17-104)||(46824242-46824329)
chr1 (17-109)||(999489-999580)
chr1 (17-109)||(6703458-6703550)
chr1 (17-109)||(44911023-44911115)
chr1 (17-109)||(44911401-44911493)
chr1 (25-109)||(19008723-19008806)
chr1 (17-104)||(49318130-49318216)
chr1 (17-103)||(50949529-50949615)
chr1 (31-104)||(20480591-20480662)
chr1 (28-104)||(39691976-39692051)
chr1 (17-104)||(49317755-49317841)
chr1 (17-104)||(49318407-49318493)
chr1 (58-104)||(50615243-50615289)
chr1 (58-104)||(50623071-50623117)
chr1 (17-104)||(47498304-47498389)
chr1 (28-104)||(6002240-6002315)
chr1 (28-104)||(49284412-49284487)
chr1 (17-104)||(50429659-50429746)
chr1 (52-109)||(8108719-8108776)
chr1 (30-107)||(50949161-50949237)
chr1 (52-104)||(47955309-47955361)
chr1 (53-104)||(8108993-8109044)
chr1 (53-104)||(47498495-47498545)
chr1 (52-106)||(1176837-1176891)
chr1 (30-104)||(21687445-21687517)
chr1 (36-102)||(32162734-32162799)
chr1 (55-108)||(22149701-22149754)
chr1 (52-109)||(47955607-47955664)
chr1 (28-104)||(6002870-6002945)
chr1 (44-104)||(19007738-19007796)
chr1 (17-104)||(44224083-44224169)
chr1 (53-104)||(48190774-48190825)
chr1 (52-109)||(31848191-31848248)
chr1 (52-104)||(17518601-17518652)
chr1 (53-109)||(48191355-48191411)
chr1 (53-104)||(33085674-33085725)
chr1 (54-109)||(39690792-39690847)
chr1 (52-110)||(1177017-1177075)
chr1 (52-109)||(41083210-41083266)
chr1 (52-104)||(13589658-13589709)
chr1 (52-104)||(41082912-41082964)
[»] chr8 (51 HSPs)
chr8 (17-107)||(34498122-34498212)
chr8 (17-109)||(37396706-37396798)
chr8 (17-108)||(25439090-25439180)
chr8 (25-104)||(37397118-37397196)
chr8 (17-104)||(17431290-17431377)
chr8 (17-104)||(24473732-24473819)
chr8 (17-104)||(41662524-41662611)
chr8 (17-109)||(6199060-6199152)
chr8 (17-109)||(15444611-15444703)
chr8 (27-104)||(20861613-20861689)
chr8 (17-104)||(9623505-9623592)
chr8 (17-104)||(24473346-24473433)
chr8 (25-109)||(34498528-34498611)
chr8 (42-104)||(25438795-25438856)
chr8 (28-107)||(13027257-13027335)
chr8 (17-109)||(6198656-6198748)
chr8 (28-109)||(13937365-13937445)
chr8 (28-104)||(9822751-9822826)
chr8 (28-104)||(9823337-9823412)
chr8 (52-104)||(15156184-15156236)
chr8 (17-104)||(16169571-16169658)
chr8 (28-104)||(22851393-22851468)
chr8 (17-108)||(33727069-33727160)
chr8 (28-104)||(39724024-39724099)
chr8 (17-109)||(2856524-2856616)
chr8 (28-109)||(13026633-13026713)
chr8 (52-109)||(15155881-15155938)
chr8 (52-104)||(765737-765789)
chr8 (28-104)||(3307341-3307416)
chr8 (28-104)||(13936726-13936800)
chr8 (17-104)||(15444214-15444301)
chr8 (52-104)||(37752415-37752467)
chr8 (52-104)||(41662402-41662454)
chr8 (55-104)||(12281127-12281176)
chr8 (28-109)||(15042143-15042223)
chr8 (52-104)||(12281425-12281477)
chr8 (28-104)||(15442766-15442841)
chr8 (17-104)||(16169177-16169263)
chr8 (53-104)||(23123341-23123392)
chr8 (53-104)||(37752087-37752138)
chr8 (54-104)||(3463946-3463996)
chr8 (58-104)||(33726697-33726743)
chr8 (52-109)||(16928940-16928997)
chr8 (55-104)||(43162237-43162285)
chr8 (52-104)||(16929241-16929293)
chr8 (52-104)||(43245874-43245926)
chr8 (52-104)||(43246175-43246227)
chr8 (52-103)||(43162538-43162588)
chr8 (36-104)||(9623864-9623932)
chr8 (52-104)||(34313768-34313818)
chr8 (52-104)||(41662110-41662162)
[»] chr5 (50 HSPs)
chr5 (17-107)||(21207226-21207316)
chr5 (17-109)||(12498565-12498657)
chr5 (17-109)||(26570727-26570819)
chr5 (17-109)||(26571128-26571220)
chr5 (17-109)||(12498892-12498984)
chr5 (17-104)||(19514927-19515014)
chr5 (17-109)||(10098905-10098996)
chr5 (17-109)||(43464156-43464247)
chr5 (17-104)||(3888242-3888329)
chr5 (17-104)||(34147474-34147561)
chr5 (17-108)||(43463755-43463845)
chr5 (25-108)||(2817148-2817230)
chr5 (17-104)||(22729011-22729096)
chr5 (17-104)||(37780707-37780793)
chr5 (17-104)||(19514528-19514616)
chr5 (17-108)||(3888626-3888717)
chr5 (17-104)||(22729404-22729490)
chr5 (17-104)||(25940524-25940611)
chr5 (17-104)||(25940978-25941065)
chr5 (24-104)||(37610205-37610283)
chr5 (17-104)||(37780323-37780409)
chr5 (25-104)||(10098522-10098600)
chr5 (17-109)||(41072178-41072269)
chr5 (17-104)||(34147144-34147229)
chr5 (30-109)||(11351405-11351483)
chr5 (25-107)||(30401882-30401963)
chr5 (17-93)||(37610582-37610658)
chr5 (17-108)||(11316938-11317029)
chr5 (28-104)||(18817587-18817662)
chr5 (17-107)||(11316714-11316804)
chr5 (28-109)||(18816950-18817030)
chr5 (52-109)||(25116060-25116117)
chr5 (52-109)||(25175150-25175207)
chr5 (28-104)||(2817551-2817625)
chr5 (52-104)||(18433315-18433367)
chr5 (29-109)||(31569905-31569983)
chr5 (52-110)||(25115754-25115812)
chr5 (52-110)||(25174846-25174904)
chr5 (28-104)||(11350811-11350885)
chr5 (57-109)||(16466746-16466798)
chr5 (53-104)||(18433018-18433069)
chr5 (54-109)||(41382891-41382945)
chr5 (52-110)||(33324837-33324895)
chr5 (54-108)||(9869559-9869611)
chr5 (53-104)||(26020453-26020504)
chr5 (172-237)||(7385049-7385115)
chr5 (55-101)||(16726084-16726130)
chr5 (52-109)||(5187829-5187886)
chr5 (59-106)||(12441196-12441244)
chr5 (53-109)||(22428932-22428987)
[»] chr3 (48 HSPs)
chr3 (17-109)||(48159895-48159987)
chr3 (17-104)||(53687891-53687978)
chr3 (17-107)||(27238864-27238954)
chr3 (17-107)||(53766163-53766253)
chr3 (17-104)||(26007185-26007271)
chr3 (17-104)||(42673260-42673346)
chr3 (17-104)||(48160297-48160384)
chr3 (17-109)||(40848925-40849017)
chr3 (17-104)||(22429560-22429646)
chr3 (17-104)||(3353131-3353215)
chr3 (17-109)||(3353515-3353606)
chr3 (17-109)||(27238463-27238555)
chr3 (17-109)||(36180954-36181046)
chr3 (17-104)||(10348763-10348850)
chr3 (17-104)||(40848524-40848610)
chr3 (17-104)||(42672981-42673067)
chr3 (17-104)||(47666299-47666386)
chr3 (17-109)||(26007583-26007675)
chr3 (17-104)||(36180559-36180644)
chr3 (17-104)||(22429161-22429248)
chr3 (25-104)||(24485433-24485510)
chr3 (43-109)||(42455788-42455853)
chr3 (17-104)||(10348482-10348569)
chr3 (17-104)||(53688267-53688353)
chr3 (17-107)||(24485022-24485111)
chr3 (17-104)||(42456159-42456244)
chr3 (17-109)||(47665909-47666001)
chr3 (28-104)||(8314016-8314091)
chr3 (17-104)||(44007970-44008057)
chr3 (52-104)||(10293908-10293960)
chr3 (28-88)||(21896487-21896546)
chr3 (54-109)||(8315083-8315137)
chr3 (53-104)||(20969019-20969070)
chr3 (54-104)||(53766580-53766630)
chr3 (28-109)||(1928410-1928489)
chr3 (52-104)||(20968721-20968773)
chr3 (17-104)||(44008365-44008451)
chr3 (54-103)||(4947263-4947312)
chr3 (52-104)||(10293611-10293663)
chr3 (53-104)||(3644783-3644834)
chr3 (54-104)||(1927775-1927825)
chr3 (53-107)||(23630035-23630089)
chr3 (172-237)||(52018624-52018690)
chr3 (52-105)||(26540693-26540745)
chr3 (51-104)||(47871120-47871172)
chr3 (52-104)||(17372301-17372353)
chr3 (54-102)||(18874887-18874935)
chr3 (52-104)||(18875190-18875242)
[»] scaffold0460 (2 HSPs)
scaffold0460 (17-104)||(333-420)
scaffold0460 (17-104)||(728-813)
[»] scaffold0029 (2 HSPs)
scaffold0029 (17-104)||(9908-9996)
scaffold0029 (54-109)||(10320-10373)
[»] scaffold0069 (2 HSPs)
scaffold0069 (17-104)||(50470-50557)
scaffold0069 (25-104)||(50078-50154)
[»] scaffold0017 (2 HSPs)
scaffold0017 (17-104)||(185238-185325)
scaffold0017 (17-104)||(184842-184929)
[»] chr6 (29 HSPs)
chr6 (17-104)||(7654512-7654599)
chr6 (17-104)||(10087822-10087909)
chr6 (17-104)||(33974263-33974350)
chr6 (25-107)||(32733969-32734050)
chr6 (17-104)||(22755053-22755140)
chr6 (17-93)||(29074336-29074412)
chr6 (17-93)||(29079100-29079176)
chr6 (17-93)||(29106909-29106985)
chr6 (17-104)||(2354774-2354861)
chr6 (28-109)||(33829612-33829692)
chr6 (24-100)||(13177028-13177102)
chr6 (17-104)||(22684322-22684408)
chr6 (17-104)||(22754660-22754746)
chr6 (28-104)||(33828993-33829068)
chr6 (52-104)||(18241857-18241909)
chr6 (17-108)||(32733556-32733647)
chr6 (17-107)||(33973864-33973954)
chr6 (52-109)||(3403988-3404045)
chr6 (17-104)||(2354412-2354498)
chr6 (58-110)||(21032285-21032337)
chr6 (53-104)||(3403720-3403771)
chr6 (52-109)||(30388361-30388418)
chr6 (52-104)||(3825530-3825581)
chr6 (52-107)||(12714431-12714486)
chr6 (52-106)||(21032101-21032156)
chr6 (57-108)||(31598732-31598782)
chr6 (52-109)||(13579650-13579706)
chr6 (53-109)||(10039674-10039729)
chr6 (52-104)||(11656781-11656833)
[»] scaffold0176 (2 HSPs)
scaffold0176 (17-109)||(20007-20099)
scaffold0176 (17-104)||(19624-19710)
[»] scaffold0041 (2 HSPs)
scaffold0041 (17-104)||(38659-38746)
scaffold0041 (17-75)||(38283-38341)
[»] scaffold0328 (2 HSPs)
scaffold0328 (28-104)||(6771-6846)
scaffold0328 (28-104)||(6155-6230)
[»] scaffold0802 (2 HSPs)
scaffold0802 (52-104)||(1121-1173)
scaffold0802 (52-104)||(1419-1471)
[»] scaffold0319 (2 HSPs)
scaffold0319 (52-104)||(6397-6449)
scaffold0319 (52-104)||(6696-6747)
[»] scaffold0192 (1 HSPs)
scaffold0192 (52-104)||(25368-25420)
[»] scaffold0001 (3 HSPs)
scaffold0001 (52-104)||(438933-438985)
scaffold0001 (54-107)||(183364-183416)
scaffold0001 (52-104)||(183662-183713)
[»] scaffold0110 (2 HSPs)
scaffold0110 (52-109)||(45806-45862)
scaffold0110 (56-104)||(45540-45587)
[»] scaffold0002 (1 HSPs)
scaffold0002 (52-104)||(411926-411977)
[»] scaffold0598 (1 HSPs)
scaffold0598 (55-104)||(6610-6659)
[»] scaffold1221 (1 HSPs)
scaffold1221 (55-107)||(1786-1837)


Alignment Details
Target: chr2 (Bit Score: 134; Significance: 1e-69; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 118 - 326
Target Start/End: Original strand, 33220701 - 33220914
Alignment:
Q  118 atgctcaaattcaaattgagtcgaacagttcttcgaactctataannnnnnnnnaaatcattttttcttgaataatattaaaaaataattggattgtttc 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||||         ||||| |||||||||||||||||||||||||  |||||||||||||    
T  33220701 atgctcaaattcaaatcgagtcgaacagttcttcgaactctataatttttttaaaaatcgttttttcttgaataatattaaaaaaagattggattgtttc 33220800  T
Q  218 gtattctaccgattagtaattcagaaatcattcaaactctatttctcttggtcacatatctgtttcacataattcaa----aattattcaagactc-gac 312  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| |||    
T  33220801 gtattctaccaattagtaattcagaaatcagtcaaactctatttctcttggtcacatatctgtttcacataattcaatatttattattcaagactcagac 33220900  T
Q  313 caaaatattatata 326  Q
    ||||||||||||||    
T  33220901 caaaatattatata 33220914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 37720293 - 37720207
Alignment:
Q  17 aaactataggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  37720293 aaactataggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37720207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 8851238 - 8851147
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8851238 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacct 8851147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 8851546 - 8851633
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8851546 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 8851633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 7664329 - 7664246
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  7664329 ggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 7664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 7664637 - 7664724
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7664637 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 7664724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 26692784 - 26692874
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  26692784 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaacc 26692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 26692474 - 26692395
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  26692474 gcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaaacct 26692395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 6325007 - 6324924
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  6325007 aaactataggggacaaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 16910917 - 16910830
Alignment:
Q  17 aaactatag-gggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||||||    
T  16910917 aaactatagagggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaa 16910830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 17851058 - 17850981
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  17851058 ggggcaaaatcgctcgtt-aaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 17850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 18750099 - 18750176
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  18750099 ggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-gggggagaagtgcaattaa 18750176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 41790876 - 41790968
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  41790876 aaactatagggggcaaaatcgctcgttttaaacaatggggg-gcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagccta 41790968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 5378742 - 5378659
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||| ||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  5378742 ggggcaaaatcgcacgttttaaactacgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 5793537 - 5793446
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  5793537 aaactatagggggcaaaatcgctcgtttaaaactatagga-tgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaaacct 5793446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 6325311 - 6325398
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||| |||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||    
T  6325311 aaactatagggggcaaaatcgctcgtttaatactatgagg-tgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 6325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 16911233 - 16911319
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||    
T  16911233 aaactataggggacaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggcg-aaagtgcaattaa 16911319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 41790580 - 41790491
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  41790580 aaactatagggggcaaaatcgctcgttttaaacaatgggg-tgcaaaatcgcacaattgacaaactatag-ggggaaaaatgcaattaaacc 41790491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 5379932 - 5380015
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||| ||||| |||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  5379932 ggggcaaaatcgcacgttttaaactacgggg-tgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagccta 5380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 19141813 - 19141901
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  19141813 aaactatagggggcaaaatcgctcgttttaaactatggga-tgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaaacc 19141901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 7979655 - 7979573
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaat 101  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||   ||||||||||||||    
T  7979655 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcgcacaattgtcaaactata--agggaaaagtgcaat 7979573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 19141533 - 19141447
Alignment:
Q  17 aaactataggggcaaaat-cgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  19141533 aaactatagggggtaaattcgctcgtttaaaactatgggg-tgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaa 19141447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 2639458 - 2639538
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||| ||||    
T  2639458 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 26841665 - 26841585
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||| ||||    
T  26841665 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 26841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 2638898 - 2638823
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| ||||  ||||||| ||||| |||||||||    
T  2638898 gcaaaatcgctcgtttaaaaatatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 2638823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 7979967 - 7980053
Alignment:
Q  17 aaactatagg-ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||| | || ||||||||||||||    
T  7979967 aaactataggcggcgaaatcgctcgtttaaaactat-ggggtgcaaaatcgcacaattagcaaactata-gaggaaaaagtgcaattaa 7980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 17851366 - 17851433
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactata 84  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  17851366 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgtaaaatcgcacaattggcaaactata 17851433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 7591279 - 7591203
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaa 105  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||| ||||||||    
T  7591279 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaaa 7591203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 30190978 - 30190921
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  30190978 gggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 18296154 - 18296079
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||| |||||||    
T  18296154 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 18296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 20347463 - 20347515
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  20347463 gggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 20347515  T

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Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 26842214 - 26842289
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||| ||||    
T  26842214 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaa 26842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 18749815 - 18749726
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| |||||||  |||||||||||||| ||||||||||||| || ||||||||||||| | || | |||||||||||||||||    
T  18749815 aaactatagggggcaaaatcattcgtttaaaactat-ggggtgcaaaatcacataattgacaaactaga-ggagtaaaagtgcaattaaacc 18749726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 7591826 - 7591901
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||||||||  ||||| | ||||  |||||||||    
T  7591826 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaa 7591901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 11883678 - 11883626
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  11883678 gggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 11883626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 11883925 - 11883977
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  11883925 gggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 11883977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 30191224 - 30191276
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| | |||  |||||||||||||||||||||||    
T  30191224 gggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaa 30191276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 38490817 - 38490891
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||| ||| |  ||||||||||||||||||  ||||||||||| || |||||||||||||    
T  38490817 gcaaaatcgctcgtttaaaaccatgaga-tgcaaaatcgcacaattggtaaactatagggagg-aaagtgcaattaa 38490891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 40469728 - 40469784
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    ||||||||||||||||||||||  ||||  |||||||| ||||||||||||||||||    
T  40469728 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaaacct 40469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 6171456 - 6171507
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||| |||||||| ||||  |||||||||||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaa 6171507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 18296693 - 18296744
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 18296744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 24832385 - 24832334
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  24832385 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 24832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 15920833 - 15920779
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaac 106  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||| ||||||||    
T  15920833 gggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaaac 15920779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 18055316 - 18055370
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||||||||||||||||||   ||| ||| |||||||||||||||||    
T  18055316 ggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaaacc 18055370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 6495723 - 6495772
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||| |||||  |||||| ||||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaa 6495772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 20347217 - 20347161
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||| |||||  |||| ||||||||||| |||||| ||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagccta 20347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 32673142 - 32673197
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    ||||||||||||||||||||||| ||||  ||| |||| ||||||||||||||||||    
T  32673142 gggggtgcaaaatcgcacaattggcaaaagata-ggggaaaaagtgcaattaaacct 32673197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 18055222 - 18055167
Alignment:
Q  52 gggggtgcaaaatcgcacaattgac-aaactataggggggaaaagtgcaattaaac 106  Q
    ||||||||||||||||||||||| | ||| ||||||| | ||||||||||||||||    
T  18055222 gggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 18055167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 43495483 - 43495537
Alignment:
Q  52 gggggtgcaaaatcgcacaattgac-aaactataggggggaaaagtgcaattaaac 106  Q
    ||||||||||||||||||||||||| |||  ||| |||||||||||||||||||||    
T  43495483 gggggtgcaaaatcgcacaattgacaaaaagata-gggggaaaagtgcaattaaac 43495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 6495519 - 6495470
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||| |||||  |||||| ||||||||||||||||    
T  6495519 gggtgcaaaatcgcacaattaacaaa-gatagggaggaaaagtgcaattaa 6495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 29230334 - 29230280
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||| |||||||||||||  |||| | |||||||||||||||| ||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagccta 29230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 29343633 - 29343583
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaa 105  Q
    ||||||||||| |||||||||||||  |||| | |||||||||||||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaaa 29343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 6171207 - 6171159
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaa 6171159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 43495356 - 43495312
Alignment:
Q  60 aaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||  |||| |||||| |||||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaa 43495312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 18864057 - 18863967
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18864057 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 18863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 20418978 - 20418886
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20418978 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 20419288 - 20419375
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20419288 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 20419375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 22740246 - 22740159
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22740246 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 22740159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 10533124 - 10533031
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctag 110  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  10533124 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctag 10533031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 9034958 - 9034865
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  9034958 aaactatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 37889223 - 37889315
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  37889223 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 37889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 42418992 - 42419084
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  42418992 aaactatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactata-gggggaaaagtgcaattaaaccta 42419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 3205057 - 3205144
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3205057 aaactatagggggcaaaatcgctcgtttaaaactacgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 3205144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 9035257 - 9035344
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  9035257 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9035344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 17157057 - 17156970
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17157057 aaactatagggggcaaaatcgctcatttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 17156970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 37888923 - 37888836
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  37888923 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37888836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 37972360 - 37972447
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  37972360 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37972447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 22740555 - 22740643
Alignment:
Q  17 aaactataggg-gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaac 106  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22740555 aaactatagggagcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaaac 22740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 13744197 - 13744283
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  13744197 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 13744283  T

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Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 37972050 - 37971958
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||    
T  37972050 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagccta 37971958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 13741647 - 13741560
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| |||||||||    
T  13741647 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaa 13741560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 48359409 - 48359323
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48359409 aaactatagggggtaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaa 48359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 29293012 - 29292925
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||| |||| |||||  |||||||||||||||||| |||||||||||||||||||||||||||||    
T  29293012 aaactatagggggcaaaatcgctcgttttaaacaatggga-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 29292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 38826877 - 38826964
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||| || ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  38826877 aaactatagggggcaaaaccgttcgtttaaaactatgagg-tgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 38826964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 3204757 - 3204672
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  3204757 aaactatagggggcaaaattgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaa 3204672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 29293310 - 29293397
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||| |||| |||| | |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  29293310 aaactatagggggcaaaatcgctcgttttaaacaatggag-tgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 29293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 36527465 - 36527383
Alignment:
Q  24 aggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    ||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  36527465 aggggaaaaattgatcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaaacct 36527383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 18864366 - 18864458
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctag 110  Q
    |||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||    
T  18864366 aaactatagggggcaaaatcgctcttttaaaactatgagg-tgcaaaatcgcacaattggcaaactata-gggggaaaagtacaattaagcctag 18864458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 36527762 - 36527849
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||| | ||||||| |||||||||    
T  36527762 aaactatagggggcaaaatcgctcgtttaaaactat-gggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaa 36527849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 42418681 - 42418594
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| ||  | |||||||||||||||  |||||||||||||||||||||| ||||||    
T  42418681 aaactatagggggcaaaatcgctcgtttaaaactatagga-tacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaa 42418594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 44599567 - 44599492
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  44599567 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 44599492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 44600111 - 44600186
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  44600111 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 44600186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 48359622 - 48359707
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaatta 103  Q
    |||||||||||| ||||||||||||||| |||||||| || ||||||||||||||||||  |||||||| |||| |||||||||||||    
T  48359622 aaactatagggggcaaaatcgctcgttttaaactatgtgg-tgcaaaatcgcacaattggtaaactata-ggggaaaaagtgcaatta 48359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 9412324 - 9412381
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  9412324 gggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 9412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 13863391 - 13863311
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||| ||||||||| ||||    
T  13863391 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 13863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 3687655 - 3687707
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  3687655 gggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 3687707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 13863933 - 13864007
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||| ||||  ||||||| |||||||||||||||    
T  13863933 gcaaaatcgctcgtttaaaaatatgggg-tgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13864007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 16198967 - 16199028
Alignment:
Q  42 ttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||| |||||||||||||||||| |||||||||  ||| ||||||||||||||    
T  16198967 ttaaaactatgggg-tgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaa 16199028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 9412078 - 9412026
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  9412078 gggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 9412026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 13772900 - 13772952
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  13772900 gggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaa 13772952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 109
Target Start/End: Original strand, 46816288 - 46816367
Alignment:
Q  29 caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||  |||  |||| ||| |||||||||||||| ||||    
T  46816288 caaaatcgctcgtttaaaaatatgggg-tgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagccta 46816367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 3687409 - 3687356
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactata-ggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  3687409 gggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaa 3687356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 8643742 - 8643822
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||| |  |||||| ||||||||||||||||||  |||  ||||||  ||||||||||||||| ||||    
T  8643742 gcaaaatcgctcgtttaataacatgggg-tgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagccta 8643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 27096341 - 27096395
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||| ||||||||| |||||||||||||  ||| ||||||||||||||||||||||    
T  27096341 ggggatgcaaaatcacacaattgacaaaagata-gggggaaaagtgcaattaaacc 27096395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 27181962 - 27181908
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||| ||||||||| |||||||||||||  |||||||| |||||||||||||||||    
T  27181962 ggggatgcaaaatcacacaattgacaaaagataggggg-aaaagtgcaattaaacc 27181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 6908485 - 6908536
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaac 106  Q
    ||||||||||||||||||||  ||||  ||||||||| |||||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaatagggggg-aaagtgcaattaaac 6908536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 8953888 - 8953939
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||| |||||||| |||||  ||| |||||||||||||||||||    
T  8953888 gggggtgcaaaattgcacaattaacaaaagata-gggggaaaagtgcaattaa 8953939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 13772695 - 13772639
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||| |||||||  ||||  |||||| |||||||||||||||| ||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagccta 13772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 7e-34; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 39744429 - 39744521
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39744429 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 169403 - 169490
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  169403 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 169490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 293181 - 293268
Alignment:
Q  17 aaactata-ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  293181 aaactatacggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 9023644 - 9023731
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9023644 aaactatagggggcaaaatcgctcatttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 9023731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 9380397 - 9380310
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  9380397 aaactatagggggcaaaatcgctcgtttaaaactatggggg-gcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 25161968 - 25161881
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  25161968 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 28196737 - 28196824
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  28196737 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 28196824  T

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Target: chr4; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 32703614 - 32703701
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  32703614 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32703701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 9380705 - 9380797
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  9380705 aaactatagggggcaaaatcgctcgtttaaaactatggag-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 9380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 28196436 - 28196344
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  28196436 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 28196344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 43292127 - 43292040
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  43292127 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaa 43292040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 4239339 - 4239417
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  4239339 ggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 4239417  T

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Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 9023334 - 9023242
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  9023334 aaactatagggggcaaaatcactcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagccta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 23540216 - 23540303
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  23540216 aaactatagggggtaaaatcgctcgtttaaaactataggg-tgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaa 23540303  T

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Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 169104 - 169016
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggg-gaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  169104 aaactatagggggcaaaatcgctcgtttaaaattatgggg-tgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaa 169016  T

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Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 292863 - 292780
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||||||||| |  |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  292863 ggggcaaaatcgctcgtttaaaactatgaga-tgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 26207710 - 26207797
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  26207710 aaactatagggggcaaaatcgctcgttttaaacaatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 26207797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 32703315 - 32703228
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||| |||| |||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  32703315 aaactatagggggcaaaatcgctcgtttaaaactacgggg-tgcataatcgcacaattggcaaattataggggggaaaagtgcaattaa 32703228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 43292321 - 43292408
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  43292321 aaactatagggggcaaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaa 43292408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 39744120 - 39744028
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||  ||||||||||||| |||||||||||||| ||||    
T  39744120 aaactatagggggcaaaatcgctcgtttaaaattatgggg-tggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagccta 39744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 26207450 - 26207364
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  26207450 aaactatagggggcaaaatcgctcgttttaaacaatgggg-tgcaaaatcgcacaattggcaaactatagggggg-aaagtgcaattaa 26207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 39086587 - 39086674
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||  || |||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  39086587 aaactatagggggcaaaatcgctcgtttaaaactattagg-tgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaa 39086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 39912142 - 39912057
Alignment:
Q  17 aaactataggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||| ||||||||||||||||  ||  |||||||||||||| | ||||||||||| ||||||||||||||||    
T  39912142 aaactataggggcaaaatcgttcgtttaaaactatggatgt--aaaatcgcacaattaataaactatagggaggaaaagtgcaattaa 39912057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 48406042 - 48405965
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||| |||||||||||||||||||    
T  48406042 ggggcaaaatcgctcgtttaaaactat-ggggtgcaaaattgcataattggcaaactata-gggggaaaagtgcaattaa 48405965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 48406349 - 48406438
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||| ||||| ||||||||||    
T  48406349 aaactatagggggcaaaatcgctcgtttaaaactataggg-tgcaaaatcgcacaattggcaaattatagggggg-aaagtacaattaaacc 48406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 23539920 - 23539839
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||||| ||||||||||||||  ||||||||||||| ||||    
T  23539920 ggggcaaaatcgttcgttttaaactatgggg-tgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagccta 23539839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 44468887 - 44468959
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggg 89  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||    
T  44468887 aaactatagggggcaaaatcgctcgtttaaaactatgagg-tgcaaaatcgcacaattggcaaactataggggg 44468959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 12757856 - 12757766
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||| |  |||||||| |||||||||||    
T  12757856 aaactataggggacaaaatcgctcgtttaaaactatgaga-tgcaaaatcgcacaattgacaaactata-gaaggaaaagtacaattaaacct 12757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 36096451 - 36096529
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  36096451 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 36096529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 25162277 - 25162349
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggg 89  Q
    |||||||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||    
T  25162277 aaactatagggggcaaaatcgctcgtttaaaactat-ggagtgcaaaatcacacaattgacaaaatataggggg 25162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 50678857 - 50678777
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||| ||||    
T  50678857 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 39912451 - 39912519
Alignment:
Q  17 aaactatagg-ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactatag 85  Q
    |||||||||| ||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  39912451 aaactataggtggcaaaatcactcgtttaaaactatggga-tgcaaaatcgcacaattgataaactatag 39912519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 56505771 - 56505691
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||| ||||  |||||| ||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  56505771 gcaaaatagctcaattaaaaatatgggg-tgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 13198905 - 13198957
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  13198905 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 13198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 36095895 - 36095820
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||| |||||||||    
T  36095895 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 36095820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 50679400 - 50679475
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||| ||||||| ||||  ||||||| |||||||||||||||    
T  50679400 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaa 50679475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 24775783 - 24775834
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 24775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 16555570 - 16555513
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||| |||||  ||| ||||||||||||||||||| ||||    
T  16555570 gggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccta 16555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 45830172 - 45830252
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||  |||||| || ||||||||||||||||||||  ||||||| ||||||||| ||||| ||||    
T  45830172 gcaaaatcgctcttttaaaaacatgggg-tgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagccta 45830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 22681629 - 22681578
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  22681629 gggggtgcaaaatcgcacaattgacaaaagatagggggg-aaagtgcaattaa 22681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 43050685 - 43050606
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||| |||||||||||  |||||| ||||||||||||||||||  |||  ||||||  |||||||||||||||||||    
T  43050685 gcaaaatcactcgtttaaaaacatgggg-tgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaaacct 43050606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 43051228 - 43051303
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||||| ||||  ||||||| ||||| |||||||||    
T  43051228 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaa 43051303  T

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Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 49178815 - 49178866
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaatta 103  Q
    ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||    
T  49178815 gggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

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Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 8182047 - 8181994
Alignment:
Q  52 gggggtgcaaaatcgcacaattgac-aaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| | |||| |||||||| ||||||||||||||    
T  8182047 gggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaa 8181994  T

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Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 12758168 - 12758259
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||| |||||||||||||||||| | ||||||| | || ||||| |||||||||||    |||||||||||||||||||    
T  12758168 aaactatagggggcaaaattgctcgtttaaaactatggcg-tgcaaaaacacataattggcaaactataggaaa-aaaagtgcaattaaaccta 12758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 24775695 - 24775642
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaac-tataggggggaaaagtgcaattaaac 106  Q
    |||| |||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  24775695 gggtacaaaatcgcacaattgacaaaaatatagggggcaaaagtgcaattaaac 24775642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 18077201 - 18077253
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  ||||||| |||||||||||||||    
T  18077201 gggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaa 18077253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 16555817 - 16555868
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||  ||||  ||| |||||||||||||||||||    
T  16555817 ggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaa 16555868  T

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Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 13198658 - 13198604
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaac 106  Q
    ||||||||||||||||||||||| ||||  |||  || |||||||||||||||||    
T  13198658 gggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaaac 13198604  T

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Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 18058596 - 18058662
Alignment:
Q  172 aaatcattttttcttgaataatattaaaaaataatt-ggattgtttcgtattctaccgattagtaat 237  Q
    ||||| ||||||||||||||||||| || || | || |||||||||||||||| ||| |||||||||    
T  18058596 aaatcgttttttcttgaataatattcaagaaaatttcggattgtttcgtattccaccaattagtaat 18058662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 22681881 - 22681935
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||| |||||||| |||||  ||||| ||||||||||||||||| ||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagccta 22681935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 3930479 - 3930535
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||  ||||  ||| ||||||||||||||||||| ||||    
T  3930479 gggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 5206042 - 5205986
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||  |||| |||||  |||||| |||||||||||||||| ||||    
T  5206042 ggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagccta 5205986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 11241444 - 11241392
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||| ||||||||||||||||| |||||  ||| || ||||||||||||||||    
T  11241444 ggggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaa 11241392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 11529246 - 11529171
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||| || ||||||  |||||| ||||||||| |||||||| ||||   ||||| ||||||||||||||||    
T  11529246 gcaaaatcgcacgattaaaaacatgggg-tgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaa 11529171  T

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Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 28634121 - 28634213
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28634121 aaactatagggggcaaaatcgatcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 28634213  T

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Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 48104768 - 48104677
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48104768 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaaacct 48104677  T

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Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 50430045 - 50430135
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50430045 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 50430135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 32163015 - 32163099
Alignment:
Q  24 aggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  32163015 aggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 9347216 - 9347129
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  9347216 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 26814784 - 26814697
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26814784 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 26814697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 26815092 - 26815175
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  26815092 ggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 46823933 - 46823843
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46823933 aaactatagggggcaaaatcgctcgtttaaaactatggag-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 46823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 999201 - 999111
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  999201 aaactatagggggcaaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaaacct 999111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 20371316 - 20371403
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  20371316 aaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 20371403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 20480257 - 20480171
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20480257 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaa 20480171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 21687115 - 21687028
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  21687115 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaattacacaattgacaaactataggggggaaaagtgcaattaa 21687028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 42611275 - 42611184
Alignment:
Q  17 aaactatagg-ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  42611275 aaactataggaggcaaaatcgctcgtttaaaactatgagg-tgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaaacct 42611184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 48105080 - 48105167
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||    
T  48105080 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 48105167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 50526436 - 50526523
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  50526436 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 50526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 42611578 - 42611668
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42611578 aaactatagggggcaaaatcgcttgtttaaaactatgagg-tgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaaacc 42611668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 28633810 - 28633718
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||    
T  28633810 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagccta 28633718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 13918536 - 13918449
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||||||    
T  13918536 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaa 13918449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 27172205 - 27172119
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  27172205 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 27172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 50615585 - 50615671
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  50615585 aaactatagggggcaaaatcgctcatttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 50623413 - 50623499
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  50623413 aaactatagggggcaaaatcgctcatttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 27172506 - 27172592
Alignment:
Q  17 aaactataggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||| || |||||||||||||||||||||    
T  27172506 aaactataggggcaaaatcgctcgtttaaaacaatggga-tgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaa 27172592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 6703869 - 6703945
Alignment:
Q  27 ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  6703869 ggcaaaatcgctcgtttaaaactatgggg-tgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaa 6703945  T

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Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 9347515 - 9347606
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||    
T  9347515 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaattgcacaattggcaaactatagggggg-aaagtgcaattaagccta 9347606  T

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Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 4692397 - 4692484
Alignment:
Q  17 aaactatagg-ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4692397 aaactataggaggtaaaatcgctcgtttaaaactatgggg-tgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaa 4692484  T

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Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 13918831 - 13918918
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  13918831 aaactatagggggcaaaatcgttcgtttaaaactatgagg-tgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 13918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 20371119 - 20371043
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||    
T  20371119 ggggcaaaatcgctcgtttaaaactatgggg-tgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaa 20371043  T

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Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 46824242 - 46824329
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  46824242 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaa 46824329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 999489 - 999580
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| ||||    
T  999489 aaactatagggggcaaaatcgctcgtttaaaactat-gggttgcaaaatcgcacaattggcaatctata-gggggaaaagtgcaattaagccta 999580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 6703550 - 6703458
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||  |||||||||| || |||||||||||||| ||||    
T  6703550 aaactatagggggcaaaatcgctcgtttaaaactatgagg-tgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagccta 6703458  T

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Target: chr1; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 44911115 - 44911023
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| |||| |||||||||| ||||||||||||| ||||    
T  44911115 aaactatagggggcaaaatcgctcgttttaaacaatgggg-tgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagccta 44911023  T

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Target: chr1; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 44911401 - 44911493
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||| |||| || ||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  44911401 aaactatagggggcaaaatcgctcgttttaaacaataggg-tgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaaaccta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 19008723 - 19008806
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||| || ||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  19008723 ggggcaaaattgcacgttttaaactatgggg-tgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagccta 19008806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 49318130 - 49318216
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  49318130 aaactatagggggcaaaatcgctcgttttaaactatggga-tgcaaaatcgcacaattggcaaactatagggggg-aaagtgcaattaa 49318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 50949529 - 50949615
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaatta 103  Q
    |||||||||||| ||||||||||||||| |||| ||| |  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50949529 aaactatagggggcaaaatcgctcgttttaaacaatgaga-tgcaaaatcgcacaattgacaaactatagggggggaaagtgcaatta 50949615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 20480591 - 20480662
Alignment:
Q  31 aaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||    
T  20480591 aaatcgctcgtttaaaactataggg-tgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 20480662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 39691976 - 39692051
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||| | |||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39691976 gcaaaatcacacgtttaaaaacatgggg-tgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaa 39692051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 49317841 - 49317755
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||  |||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  49317841 aaactatagggggtaaaatcgctcgtttaaaactat-gggatgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaa 49317755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 49318407 - 49318493
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  49318407 aaactataggggataaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattgataaactata-gggggaaaaatgcaattaa 49318493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 50615289 - 50615243
Alignment:
Q  58 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50615243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 50623117 - 50623071
Alignment:
Q  58 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50623071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 47498389 - 47498304
Alignment:
Q  17 aaactatag-gggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||| ||||||||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||||||  |||||||||||||    
T  47498389 aaactatagagggcaaaatcgcttgtttaaaactatggga-tgcaaaattgcacaattggcaaactataggggg--aaagtgcaattaa 47498304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 6002315 - 6002240
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||||||||||  ||||||| |||||||||||||||    
T  6002315 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaa 6002240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 49284487 - 49284412
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  49284487 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 49284412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 50429746 - 50429659
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||  |||| ||||  |||||||||| |||||||    
T  50429746 aaactatagggggcaaaatcgctcgtttaaaactat-gaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaa 50429659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 8108776 - 8108719
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||| |||||  |||||| |||||||||||||||||||||    
T  8108776 gggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaaccta 8108719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 50949237 - 50949161
Alignment:
Q  30 aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||||| |||| ||| || |||||||||||||||||| || |||||||| ||||||||| ||||||||||    
T  50949237 aaaatcgctcgttttaaacaatgagg-tgcaaaatcgcacaattggcagactataggagggaaaagtacaattaaacc 50949161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 47955361 - 47955309
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  47955361 gggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 47955309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 8108993 - 8109044
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 8109044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 47498495 - 47498545
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  47498495 ggggtgcaaaaccgcacaattgacaaactata-gggggaaaagtgcaattaa 47498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 1176891 - 1176837
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaac 106  Q
    ||||||||||||| ||||||||||||||  |||||||| ||||||||||||||||    
T  1176891 gggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaaac 1176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 21687445 - 21687517
Alignment:
Q  30 aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| | ||| |||||||||||||||| |||| |||| ||||||||||||| |||||    
T  21687445 aaaatcgctcgtttaaaactat-gaggtacaaaatcgcacaattggcaaattata-gggggaaaagtgctattaa 21687517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 32162799 - 32162734
Alignment:
Q  36 gctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaatt 102  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||||||  | ||||||||||||    
T  32162799 gctcgtttaaaactatgggg-tgcaaaattgcacaattggcaaactataggaagaaaaagtgcaatt 32162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 22149701 - 22149754
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaaacct 22149754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 47955607 - 47955664
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||| | |||  ||||||||||||||||||||||| ||||    
T  47955607 gggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 6002870 - 6002945
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||  |||  ||||||  |||||||||||||||    
T  6002870 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaa 6002945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 19007796 - 19007738
Alignment:
Q  44 aaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  19007796 aaaactatagggg-gcaaaatcgcacaattggcaaactatagggggg-aaagtgcaattaa 19007738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 44224083 - 44224169
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| |  |||| |||||||||||||    
T  44224083 aaactataggggacaaaatcgctcgtttaaaactat-gggatgcaaaatcacacaattggtaaactaca-tggggcaaagtgcaattaa 44224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 48190825 - 48190774
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 48190774  T

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Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 31848191 - 31848248
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||| |||||| |||||  ||||||| ||||||||||||||| ||||    
T  31848191 gggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagccta 31848248  T

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Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 17518601 - 17518652
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  17518601 gggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaattaa 17518652  T

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Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 48191355 - 48191411
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||| |||| ||||  ||||||| ||||||||||||||| ||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagccta 48191411  T

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Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 33085725 - 33085674
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||  |||||||||||| ||||||| |||||||| |||||||    
T  33085725 ggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaattaa 33085674  T

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Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 39690847 - 39690792
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||| | || ||||||||| |||||||||| ||| ||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagccta 39690792  T

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Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 1177017 - 1177075
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctag 110  Q
    ||||||||||||| ||||||||  | ||  |||||| ||||||||||||||||||||||    
T  1177017 gggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaaacctag 1177075  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 41083210 - 41083266
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||| | |||||  ||| ||||||||||||||||||| ||||    
T  41083210 gggggtgcaaaatcgcacaactaacaaaagata-gggggaaaagtgcaattaagccta 41083266  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 13589658 - 13589709
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  ||| |||||||||||||||||||    
T  13589658 gggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaa 13589709  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 41082964 - 41082912
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||| |||||||||||||||||| ||||  |||||||| |||||| |||||||    
T  41082964 ggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaa 41082912  T

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Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 34498212 - 34498122
Alignment:
Q  17 aaactataggg-gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34498212 aaactatagggtgcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaaacc 34498122  T

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Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 37396798 - 37396706
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  37396798 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagccta 37396706  T

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Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 25439090 - 25439180
Alignment:
Q  17 aaactatag-gggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25439090 aaactatagagggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaaacct 25439180  T

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Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 37397118 - 37397196
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  37397118 ggggcaaagtcgctcgtttaaaactatggggg-gcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37397196  T

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Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 17431377 - 17431290
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||||||    
T  17431377 aaactatagggggcaaaatcgctcgtttaaaactatgagg-tgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaa 17431290  T

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Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 24473732 - 24473819
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||||||||||    
T  24473732 aaactataggggacaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaa 24473819  T

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Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 41662611 - 41662524
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||||||    
T  41662611 aaactatagggggcaaaatcgctcgtttaaaactatgagg-tgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 41662524  T

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Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 6199060 - 6199152
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||  ||||||||||||||| ||||    
T  6199060 aaactatagggggcaaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagccta 6199152  T

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Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 15444611 - 15444703
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||  ||| ||||||||| |||||||||||||||||||    
T  15444611 aaactataggggataaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaaccta 15444703  T

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Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 20861613 - 20861689
Alignment:
Q  27 ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| |||| |||||||||    
T  20861613 ggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaa 20861689  T

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Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 9623592 - 9623505
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| | | ||||||||||||||    
T  9623592 aaactatagggggcaaaattgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaa 9623505  T

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Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 24473433 - 24473346
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  24473433 aaactatagggggcaaaatcgctcatttaaaattatgggg-tgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaa 24473346  T

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Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 34498528 - 34498611
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||| |||| || |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  34498528 ggggcataatctcttgtttaaaactatgggg-tgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagccta 34498611  T

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Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 25438856 - 25438795
Alignment:
Q  42 ttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  25438856 ttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25438795  T

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Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 13027257 - 13027335
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  13027257 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 13027335  T

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Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 6198748 - 6198656
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||  | || ||| ||| ||||||||||||||| ||||    
T  6198748 aaactatagggggcaaaatcgctcgtttaaaactataggg-tgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaattaagccta 6198656  T

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Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 13937365 - 13937445
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||| |||||||||||  |||||| |||||| ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  13937365 gcaaaatcactcgtttaaaaacatgggg-tgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagccta 13937445  T

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Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 9822826 - 9822751
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  9822826 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaa 9822751  T

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Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 9823337 - 9823412
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  9823337 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 9823412  T

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Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 15156184 - 15156236
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  15156184 gggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 15156236  T

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Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 16169571 - 16169658
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||  |  |||||| | |||||||||| ||||||||||| ||||||||||||||||    
T  16169571 aaactatagggggcaaaatcgctcgtttaaaactataaga-tgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaa 16169658  T

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Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 22851468 - 22851393
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||| ||||||||  |||||| |||||||||||||||||||||||  ||||||| |||||||||||||||    
T  22851468 gcaaaatcgcttgtttaaaaacatgggg-tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 22851393  T

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Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 33727069 - 33727160
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||||||||||||||||  | |||||||||||||||||  |||||||||  || |||||||| ||||||||||    
T  33727069 aaactatagggggcaaaatcgctcgtttaaaactatgaag-tgcaaaatcgcacaattagcaaactataaaggagaaaagtgtaattaaacct 33727160  T

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Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 39724024 - 39724099
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  39724024 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 39724099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 2856616 - 2856524
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||  |||||||  ||||| ||||||||||| |||||||||||||||||| |||||||||||| |||||| | ||||||| ||||    
T  2856616 aaactataggggataaaatcgaacgttttaaactatgggg-tgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagccta 2856524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 13026713 - 13026633
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||  ||| || |||||||||||||||||| ||||  ||||||| ||||||||||||||| ||||    
T  13026713 gcaaaatcgctcgtttaaaaacatgagg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 15155938 - 15155881
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  15155938 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 15155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 765789 - 765737
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  765789 gggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 765737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 3307416 - 3307341
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||| |||||||| ||||||  |||||||||||||||||||||||  ||||||| ||||| |||||||||    
T  3307416 gcaaaatcgcttgtttaaaaatatggga-tgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaa 3307341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 13936800 - 13936726
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||  |||  ||| |||||||||||||||||||    
T  13936800 gcaaaatcgctcgtttaaaaatat-ggggtgcaaaatcgcacaattggtaaaagata-gggggaaaagtgcaattaa 13936726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 15444301 - 15444214
Alignment:
Q  17 aaactataggg-gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||| |||||||||||||||||||||||| ||  || ||||| | ||||||| |||||||||| |||||||| |||||||||    
T  15444301 aaactatagggagcaaaatcgctcgtttaaaactat-ggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaa 15444214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 37752415 - 37752467
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  37752415 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 37752467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 41662402 - 41662454
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  41662402 gggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 41662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 12281176 - 12281127
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  12281176 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 12281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 15042223 - 15042143
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||| || ||| ||||||||| |||||||| ||||  ||| ||||| ||||||||||||||||||    
T  15042223 gcaaaatcgctcatttaaaacaataggg-tgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaaaccta 15042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 12281425 - 12281477
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  12281425 gggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 12281477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 15442841 - 15442766
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||| |||||||||  |||||| ||||||||| |||||||| | || |||||||||||||| |||||||||    
T  15442841 gcaaaatcgcacgtttaaaaacatgggg-tgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaa 15442766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 16169263 - 16169177
Alignment:
Q  17 aaactataggggcaaaa-tcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||| | ||||||||||||||||| || |||||||| ||||||||| ||||||||| ||  |||||||||||||||    
T  16169263 aaactatagggggaaaaattgctcgtttaaaactatgagg-tgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaattaa 16169177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 23123392 - 23123341
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||||||||||    
T  23123392 ggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 23123341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 37752138 - 37752087
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaa 37752087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 3463946 - 3463996
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||| |||||||||||  |||| ||||||||||||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaa 3463996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 33726743 - 33726697
Alignment:
Q  58 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||    
T  33726743 gcaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaa 33726697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 16928997 - 16928940
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||  ||||  ||||||||| ||||||||||||| ||||    
T  16928997 gggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagccta 16928940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 43162285 - 43162237
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatata-gggggaaaagtgcaattaa 43162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 16929241 - 16929293
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  ||||||| |||||||||||||||    
T  16929241 gggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaa 16929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 43245926 - 43245874
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||| ||||||||||||||    
T  43245926 gggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaa 43245874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 43246175 - 43246227
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||| |||||||  ||||  |||||||||||||||||||||||    
T  43246175 gggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaa 43246227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 43162538 - 43162588
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaatta 103  Q
    |||||||||||||||||| |||||||||  ||| ||||||||||||||||||    
T  43162538 gggggtgcaaaatcgcacgattgacaaaagata-gggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 9623864 - 9623932
Alignment:
Q  36 gctcgtttaaaactatg-ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||  ||||||||||||| ||| |||| ||||||||| ||  |||||||||||||||    
T  9623864 gctcgtttaaaactatatggggtgcaaaatcacacgattggcaaactata-ggatgaaaagtgcaattaa 9623932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 34313818 - 34313768
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||  ||||||||||||||||||    
T  34313818 gggggtgcaaaatcgcacaattaacaaaagata--ggggaaaagtgcaattaa 34313768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 41662162 - 41662110
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  ||| |||| ||| ||||||||||    
T  41662162 gggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaa 41662110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 21207316 - 21207226
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21207316 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 21207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 12498657 - 12498565
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  12498657 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 26570819 - 26570727
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26570819 aaactataggggacaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 26571128 - 26571220
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  26571128 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 12498892 - 12498984
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  12498892 aaactatagggggcaaaatcgcttgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 19514927 - 19515014
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19514927 aaactatagggggcaaaataactcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 19515014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 10098905 - 10098996
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  10098905 aaactataggggataaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-ggaggaaaagtgcaattaaaccta 10098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 43464156 - 43464247
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  43464156 aaactatagggggcaaaatcgctcgtttaaaactatgagg-tgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 3888329 - 3888242
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  3888329 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaa 3888242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 34147474 - 34147561
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34147474 aaactatagggggcaaaatcgctcgtttaaaactacgagg-tgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 43463845 - 43463755
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  43463845 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcgcacaattggcaaactata-aggggaaaagtgcaattaaacct 43463755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 2817230 - 2817148
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2817230 ggggcaaaatcgctcgtttaaaattatggga-tgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacct 2817148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 22729096 - 22729011
Alignment:
Q  17 aaactataggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  22729096 aaactataggggcaaaatcgctcgtttaaaactat-gaagtgcaaaatcgcacaatttacaaactata-gggggaaaagtgcaattaa 22729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 37780707 - 37780793
Alignment:
Q  17 aaactataggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||  ||||||||||||||||||||| |||||||    
T  37780707 aaactataggggcaaaatcgctcgtttaaaacaatgagg-tgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaa 37780793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 19514616 - 19514528
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactatagg-ggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  19514616 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaa 19514528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 3888626 - 3888717
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||| | |||||||||||||||||||||    
T  3888626 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaaacct 3888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 22729404 - 22729490
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  22729404 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcgcacaattggcaaattata-gggggaaaagtgcaattaa 22729490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 25940611 - 25940524
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  |||| |||||||||    
T  25940611 aaactatagggggcaaaatcgctcgtttaaaactataggg-tgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaa 25940524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 25940978 - 25941065
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  25940978 aaactatagggggcaaaatcgctcgtttaaaactatggga-tgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaa 25941065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 37610283 - 37610205
Alignment:
Q  24 aggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  37610283 aggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaa 37610205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 37780409 - 37780323
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  37780409 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaa 37780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 10098600 - 10098522
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| || ||||||||||||||    
T  10098600 ggggcaaaatcgctcgtttaaaactatagga-tgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 10098522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 41072178 - 41072269
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| || ||||||||| |||||||||||    
T  41072178 aaactatagggggcaaaatcgctcgtttaaaactataggg-tgcaaaatcgtacaattgacaaactata-ggaggaaaagtgtaattaaaccta 41072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 34147229 - 34147144
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||   |||||||||||||||||    
T  34147229 aaactatagggggcaaaatcgctcgtttaaaactacgggg-tgcaaaatcgcacaattgataaactata--agggaaaagtgcaattaa 34147144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 11351405 - 11351483
Alignment:
Q  30 aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| ||||  ||||| | ||||||||||||||||||||    
T  11351405 aaaatcgctcgtttaaaaatatgggg-tgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 30401963 - 30401882
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||||| |||||||||||||||  |||||||| | ||||||| |||||||||| | |||||||||||||||||||    
T  30401963 ggggcaaaatcgctagtttaaaactatggga-tgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaaacc 30401882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 37610582 - 37610658
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaa 93  Q
    |||||||||||| |||||||||||||||||||| ||| || |||||||||||||||||  ||||||||||||||||||    
T  37610582 aaactatagggggcaaaatcgctcgtttaaaacaatgagg-tgcaaaatcgcacaattagcaaactataggggggaaa 37610658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 11316938 - 11317029
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||| |||| || || ||  ||||||||||||||||||    
T  11316938 aaactatagggggcaaaatcgctcatttaaaacaatgggg-tgcaaaatcgcacaattggcaaagtacagaggaaaaaagtgcaattaaacct 11317029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 18817587 - 18817662
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  18817587 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 18817662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 11316804 - 11316714
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| |||||| |||||||||||| ||| ||  |||||||| | ||||||| ||||||||||| ||||||||||||||||||||    
T  11316804 aaactatagggggcaaaattgctcgtttaaaattatagga-tgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaaacc 11316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 18817030 - 18816950
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||| ||||||||| ||||    
T  18817030 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 18816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 25116060 - 25116117
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  25116060 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25116117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 25175150 - 25175207
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  25175150 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25175207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 2817551 - 2817625
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||  || || ||||||||||||||  ||||||||| |||||||||||||||||||    
T  2817551 gcaaaatcgctcgtttaaaactat-tggatgtaaaatcgcacaattcgcaaactata-gggggaaaagtgcaattaa 2817625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 18433315 - 18433367
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  18433315 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18433367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 31569983 - 31569905
Alignment:
Q  29 caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||| |||||||||||  ||| || |||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  31569983 caaaatcactcgtttaaaaacatgagg-tgcaaaatcgcacaattgacaaaagata-gggggaaaagtgcaattaaaccta 31569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 25115812 - 25115754
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctag 110  Q
    |||||||||||||| |||||||| ||||  ||||||||||||||||||||||| |||||    
T  25115812 gggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcctag 25115754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 25174904 - 25174846
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctag 110  Q
    |||||||||||||| |||||||| ||||  ||||||||||||||||||||||| |||||    
T  25174904 gggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcctag 25174846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 11350885 - 11350811
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||| ||| |||||||||||| ||||||||| ||||  ||||||| ||||| |||||||||    
T  11350885 gcaaaatcgctcgtttaaaaatat-ggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaa 11350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 16466746 - 16466798
Alignment:
Q  57 tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||| ||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagccta 16466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 18433069 - 18433018
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  18433069 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 18433018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 41382945 - 41382891
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||| |||||  ||||||||||||| ||||||||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa-tgcaattaaaccta 41382891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 33324837 - 33324895
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctag 110  Q
    |||||||||||||| |||||||||||||  |||||||  |||||||||||||| |||||    
T  33324837 gggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcctag 33324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 9869611 - 9869559
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    ||||||||||||||||||||  ||||  |||||| ||||||||||||||||||||    
T  9869611 gggtgcaaaatcgcacaattagcaaa--atagggaggaaaagtgcaattaaacct 9869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 26020504 - 26020453
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||  ||||  |||||| ||||||||||||||||    
T  26020504 ggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaa 26020453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 7385115 - 7385049
Alignment:
Q  172 aaatcattttttcttgaataatattaaaaaataatt-ggattgtttcgtattctaccgattagtaat 237  Q
    ||||| ||||||||||||||||||| || || | || |||||||||||||||| ||| |||||||||    
T  7385115 aaatcgttttttcttgaataatattcaagaaaatttcggattgtttcgtattccaccaattagtaat 7385049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaat 101  Q
    |||||||||||||||||||| ||||  |||||||| |||||||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 5187829 - 5187886
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||| |||||||| |||||  ||| |||| |||||||||||||| ||||    
T  5187829 gggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagccta 5187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 12441196 - 12441244
Alignment:
Q  59 caaaatcgcacaattgac-aaactataggggggaaaagtgcaattaaac 106  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaac 12441244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 22428987 - 22428932
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||  ||||  ||||||||| ||||||||||||| ||||    
T  22428987 ggggtgcaaaatcgcacaattagcaaaagatagggggg-aaagtgcaattaagccta 22428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 48159987 - 48159895
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  48159987 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 48159895  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 53687978 - 53687891
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53687978 aaactatagggggtaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 53687891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 27238864 - 27238954
Alignment:
Q  17 aaactataggg-gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  27238864 aaactatagggagcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaacc 27238954  T

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Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 53766253 - 53766163
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  53766253 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaaacc 53766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 26007271 - 26007185
Alignment:
Q  17 aaactatag-gggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  26007271 aaactatagagggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaa 26007185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 42673260 - 42673346
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  42673260 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 42673346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 48160297 - 48160384
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  48160297 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaa 48160384  T

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Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 40848925 - 40849017
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  40848925 aaactatagggggcaaaatcgcttgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagccta 40849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 22429560 - 22429646
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  22429560 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggaggg-aaagtgcaattaa 22429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 3353215 - 3353131
Alignment:
Q  17 aaactataggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3353215 aaactatagggggaaa-tcgctcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactatag-ggggaaaagtgcaattaa 3353131  T

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Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 3353515 - 3353606
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  3353515 aaactatagggggcaaaatcgctcgtttaaaactatgagg-tgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaactaaaccta 3353606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 27238555 - 27238463
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||    
T  27238555 aaactatagggggcaaaatcgctcgtttaaaactataggg-tgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 36180954 - 36181046
Alignment:
Q  17 aaactataggggcaaaa-tcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| |||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  36180954 aaactataggggaaaaaatcgctcgtttaaaactatgggg-tacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 10348763 - 10348850
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | || ||||||||||||||    
T  10348763 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 40848610 - 40848524
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  40848610 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgtaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 40848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 42673067 - 42672981
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  42673067 aaactatagggggcaaaatcgatcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatag-ggggaaaagtgcaattaa 42672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 47666299 - 47666386
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||| |||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  47666299 aaactatagggggcaaaatcgctcgttttaaacaatgggg-tgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaa 47666386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 26007583 - 26007675
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||||||||||||| ||||  | |||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  26007583 aaactatagggggcaaaatcgctcgtttaaaattatgaag-tgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaaaccta 26007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 36180644 - 36180559
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  36180644 aaactataggggtcaaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattgacaaactata--ggggaaatgtgcaattaa 36180559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 22429248 - 22429161
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||| |||| |||||||| |||||||||||||||    
T  22429248 aaactataggggacaaaatcgctcgtttaaaactattggg-tgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaa 22429161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 24485433 - 24485510
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  24485433 ggggcaaaatcgctcatttaaaactatgggg-tgcaaaatcgcacaattggcaaactata-gggagaaaagtgcaattaa 24485510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 42455853 - 42455788
Alignment:
Q  43 taaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42455853 taaaactatagggg-gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 10348569 - 10348482
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||||| | ||||||||||||||||| ||| |||||||||||||||    
T  10348569 aaactataggggacaaaatcgctcgtttaaaattatggga-tgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaa 10348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 53688267 - 53688353
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||||| | |||||||||||||    
T  53688267 aaactatagggggcaaaatcgctcgttttaaactatggag-tgcaaaatcgcacaattggcaaactataggggag-aaagtgcaattaa 53688353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 24485111 - 24485022
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || |||||| || |||||||||    
T  24485111 aaactatagggggcgaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactata-ggaggaaaaatgtaattaaacc 24485022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 42456159 - 42456244
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||   |||| |||||||  |||||||||||||    
T  42456159 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcgcacaattggggaactttaggggg--aaagtgcaattaa 42456244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 47666001 - 47665909
Alignment:
Q  17 aaactatagg-ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||| || |||||| ||||||| |||| ||| || |||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  47666001 aaactataggtggtaaaatcactcgttttaaacaatgagg-tgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 8314091 - 8314016
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||| |||||||||  || ||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  8314091 gcaaaatcgcacgtttaaaaacattggg-tgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaa 8314016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 44008057 - 44007970
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||  |  |||||| | |||||||||| ||||||||||| ||||||||||||||||    
T  44008057 aaactatagggggcaaaatcgctcgtttaaaactataaga-tgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaa 44007970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 10293908 - 10293960
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  10293908 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 10293960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 21896487 - 21896546
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactatagggg 88  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||    
T  21896487 gcaaaatcgctcgtataaaaccatgggg-tgcaaaatcgcacaattgacaaaatatagggg 21896546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 8315083 - 8315137
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatatagggggg-aaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 20969019 - 20969070
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 20969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 53766580 - 53766630
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  53766580 gggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaa 53766630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 1928410 - 1928489
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||| | ||||||||||| ||||||| |||||||||||||||||| ||||  |||||| |||||| ||||||||||||||    
T  1928410 gcaaaaccactcgtttaaaaatatgggg-tgcaaaatcgcacaattggcaaaagatagggaggaaaa-tgcaattaaaccta 1928489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 20968773 - 20968721
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||||||||||| ||||||||||    
T  20968773 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaa 20968721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 44008365 - 44008451
Alignment:
Q  17 aaactataggggcaaaa-tcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||| | ||||||||||||||||| || |||||||| ||||||||| ||||||||| ||  |||||||||||||||    
T  44008365 aaactatagggggaaaaattgctcgtttaaaactatgagg-tgcaaaattgcacaattggcaaactata-ggatgaaaagtgcaattaa 44008451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 4947312 - 4947263
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaatta 103  Q
    |||||||||||||||||||| |||||  ||||||| ||||||||||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 10293663 - 10293611
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||  |||||||  |||| |||||||||    
T  10293663 gggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaa 10293611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 3644783 - 3644834
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||| |||||  ||| ||||||||| |||||||||    
T  3644783 ggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaa 3644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 1927825 - 1927775
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||| ||||| ||||  |||||||||||| ||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaa 1927775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 23630035 - 23630089
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||||||||||||  ||||  ||||| || |||||||||||||||||    
T  23630035 ggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaaacc 23630089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 52018624 - 52018690
Alignment:
Q  172 aaatcattttttcttgaataatattaaaaaataatt-ggattgtttcgtattctaccgattagtaat 237  Q
    ||||| ||||||||||||||||||| || || | || |||||||||||||||| ||| |||||||||    
T  52018624 aaatcgttttttcttgaataatattcaagaaaatttcggattgtttcgtattccaccaattagtaat 52018690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 26540745 - 26540693
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaa 105  Q
    ||||||||||||| ||||||||||||||  ||| |||| |||||||||||||||    
T  26540745 gggggtgcaaaattgcacaattgacaaaaaata-ggggcaaaagtgcaattaaa 26540693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 47871120 - 47871172
Alignment:
Q  51 tgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||||  ||||  ||| |||||||||||||||||||    
T  47871120 tgggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaa 47871172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 17372353 - 17372301
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||| ||| ||||||||||    
T  17372353 gggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaa 17372301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 18874935 - 18874887
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaatt 102  Q
    ||||||||||||||||||||  ||||  |||||||| ||||||||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatt 18874887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 18875190 - 18875242
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||| ||||||  ||||  |||||||| ||||||||||||||    
T  18875190 gggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaa 18875242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 420 - 333
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  420 aaactatagggggcaaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 728 - 813
Alignment:
Q  17 aaactataggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  728 aaactataggggcaaaatcgctcgtttaaaattat-ggggtgcaaaatcgcacaattggcaaactata-ggggaaaaagtgcaattaa 813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 9996 - 9908
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  9996 aaactatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 9908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 10320 - 10373
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||| ||||||| |||||||||  |||||||||||| ||||| ||||    
T  10320 gggtgcaaaatcggacaattggcaaactata--ggggaaaagtgctattaagccta 10373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 50470 - 50557
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  50470 aaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 50557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 50154 - 50078
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||    
T  50154 ggggcaaaatcgctcgtttaaaactatgggg-tgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaa 50078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 185238 - 185325
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  185238 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 185325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 184929 - 184842
Alignment:
Q  17 aaactatagg-ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| || |||||||||||||||    
T  184929 aaactataggtggcaaaatcgctcgtttaaaactatgggg-tgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaa 184842  T

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Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 7654512 - 7654599
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7654512 aaactatagggggcaaagtcactcgtttaaaactatgggg-tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 7654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 10087822 - 10087909
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10087822 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaa 10087909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 33974263 - 33974350
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  33974263 aaactatagggggcaaaatcgctcgtttaaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 33974350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 32733969 - 32734050
Alignment:
Q  25 ggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  32733969 ggggcaaaatcgctcgtttaaaactatggga-tgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacc 32734050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 22755053 - 22755140
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  22755053 aaactatagggggcaaaatcgctcgtttaaaactatgtgg-tgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaa 22755140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 29074336 - 29074412
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaa 93  Q
    ||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29074336 aaactataggggggaaaatcgctcgttttaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaa 29074412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 29079100 - 29079176
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaa 93  Q
    ||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29079100 aaactataggggggaaaatcgctcgttttaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaa 29079176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 29106909 - 29106985
Alignment:
Q  17 aaactataggggc-aaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaa 93  Q
    ||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29106909 aaactataggggggaaaatcgctcgttttaaactatgggg-tgcaaaatcgcacaattggcaaactataggggggaaa 29106985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 2354774 - 2354861
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||  ||||||| |||||||||    
T  2354774 aaactatagggggcaaaatggctcgttttaaacaatgggg-tgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaa 2354861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 33829612 - 33829692
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||||||||||||| ||||    
T  33829612 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 13177028 - 13177102
Alignment:
Q  24 aggggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 100  Q
    |||||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||| |||||||||||||||    
T  13177028 aggggcaaaatcgctcgtttaaaactat-gaggtgtaaaatctcacaattgacatactata-gggggaaaagtgcaa 13177102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 22684322 - 22684408
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||| | |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||||||||||||    
T  22684322 aaactatagggggcaaaatcgtttgtttaaaactatgggg-tgcaaaatcacacaattggcaaactata-aggggaaaagtgcaattaa 22684408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 22754746 - 22754660
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||| | |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||||||||||||    
T  22754746 aaactatagggggcaaaatcgtttgtttaaaactatgggg-tgcaaaatcacacaattggcaaactata-aggggaaaagtgcaattaa 22754660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 33829068 - 33828993
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  33829068 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 33828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 18241909 - 18241857
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  18241909 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18241857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 32733647 - 32733556
Alignment:
Q  17 aaactatagg-ggcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    |||||||||| |||||||| |||||||||||||||| ||| |||||||||| | ||||| |||||||||| ||| |||| |||| ||||||||    
T  32733647 aaactataggaggcaaaattgctcgtttaaaactat-gggatgcaaaatcgtataattggcaaactatagagggaaaaaatgcacttaaacct 32733556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 33973954 - 33973864
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||||||||||| ||||||||||||| |||||||||   | | ||||||||||||| |||||||||||||| ||||||| | ||||||||||    
T  33973954 aaactataggggacaaaatcgctcgtgtaaaactataaag-tacaaaatcgcacaactgacaaactataggagggaaaaatacaattaaacc 33973864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 3403988 - 3404045
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||  ||||  ||||||||||||||||||||||| ||||    
T  3403988 gggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccta 3404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 2354498 - 2354412
Alignment:
Q  17 aaactataggggcaaaa-tcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||| |||||||||| |||| |||||  |||||||||| |||||||| ||||||||| |||||||| |||||||||    
T  2354498 aaactatagggggaaaaatcgctcgttttaaacaatggga-tgcaaaatcgtacaattgaaaaactatag-ggggaaaaatgcaattaa 2354412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 21032285 - 21032337
Alignment:
Q  58 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctag 110  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||| |||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctag 21032337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 3403771 - 3403720
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 3403720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 30388361 - 30388418
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||  ||||  |||||||| |||||| ||||||||||||    
T  30388361 gggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaattaaaccta 30388418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 3825581 - 3825530
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  |||| |||| |||||||||||||||||||    
T  3825581 gggggtgcaaaatcgcacaattagcaaaatata-gggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 12714486 - 12714431
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    |||| ||||||||||||||||| |||||  |||||||| |||||||||||| ||||    
T  12714486 ggggctgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaattcaacc 12714431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 21032156 - 21032101
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaa-actataggggggaaaagtgcaattaaac 106  Q
    ||||||||||||||||||||||||||| |  |||||||| |||||||||| |||||    
T  21032156 gggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaactaaac 21032101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 31598732 - 31598782
Alignment:
Q  57 tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacct 108  Q
    ||||||||||||||||| |||||  ||||||| |||||||||||||||||||    
T  31598732 tgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaaacct 31598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 13579650 - 13579706
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||  ||||| ||| ||| ||||||||||||||| ||||    
T  13579650 gggggtgcaaaatcgcacaattagcaaacgata-gggagaaaagtgcaattaagccta 13579706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 10039729 - 10039674
Alignment:
Q  53 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||||||||||||  ||||  ||| ||||||||||||||||||| ||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 11656781 - 11656833
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  ||||| | |||||||||||||||    
T  11656781 gggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaa 11656833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 20007 - 20099
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    |||||||||||| ||||||||   ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20007 aaactatagggggcaaaatcgtcagtttaaaactatggggg-gcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagccta 20099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 19710 - 19624
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||| |||||||||    
T  19710 aaactatagggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcgcacaattggcaaactata-tggggaaaattgcaattaa 19624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 38659 - 38746
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  38659 aaactatagggggcaaaatcgttcgtttaagactatgggg-tgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 38746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 38341 - 38283
Alignment:
Q  17 aaactatagggg-caaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattga 75  Q
    |||||||||||| ||||||||||| ||||||||||| ||| |||||||||||||||||||    
T  38341 aaactatagggggcaaaatcgctcatttaaaactat-gggatgcaaaatcgcacaattga 38283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 6771 - 6846
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||| ||||  ||||||| ||||| |||||||||    
T  6771 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 6230 - 6155
Alignment:
Q  28 gcaaaatcgctcgtttaaaactatgggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||| ||||||| ||||||| || ||||||||||||||  ||||  |||| || |||||||||||||||    
T  6230 gcaaaatcgctcatttaaaaatatgggg-tgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaa 6155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 1173 - 1121
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  1173 gggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaa 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 1419 - 1471
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  1419 gggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaa 1471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 6449 - 6397
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  6449 gggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 6397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 6696 - 6747
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  ||| |||||||||||||||||||    
T  6696 gggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaa 6747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 25368 - 25420
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  25368 gggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 25420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 438985 - 438933
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  438985 gggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 183416 - 183364
Alignment:
Q  54 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    ||||||||||||| ||||||||||||  ||| ||||||||||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagata-gggggaaaagtgcaattaaacc 183364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 183662 - 183713
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||| ||||||||||  |||| ||||||||||||||||||||||||    
T  183662 gggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaa 183713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 45806 - 45862
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 109  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||||||||| ||||    
T  45806 gggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaattaagccta 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 45587 - 45540
Alignment:
Q  56 gtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    |||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  45587 gtgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaa 45540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 411977 - 411926
Alignment:
Q  52 gggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  411977 gggggtgcaaaatcgcacaattgacaaaagata-gggggtaaagtgcaattaa 411926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 6659 - 6610
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 104  Q
    ||||||||||| ||||||| |||||  ||||||||||| |||||||||||    
T  6659 ggtgcaaaatcacacaattaacaaaagataggggggaacagtgcaattaa 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 1786 - 1837
Alignment:
Q  55 ggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 107  Q
    ||||||||||||||||||  |||||  ||||||| ||||||||||||||||||    
T  1786 ggtgcaaaatcgcacaataaacaaaagatagggg-gaaaagtgcaattaaacc 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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