View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20001_low_6 (Length: 566)

Name: NF20001_low_6
Description: NF20001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20001_low_6
NF20001_low_6
[»] chr5 (32 HSPs)
chr5 (132-439)||(8806122-8806430)
chr5 (146-441)||(3654678-3654974)
chr5 (122-417)||(38915540-38915836)
chr5 (122-417)||(29789527-29789824)
chr5 (122-356)||(13826101-13826342)
chr5 (122-415)||(5121015-5121312)
chr5 (118-417)||(13820691-13820995)
chr5 (125-374)||(43171272-43171518)
chr5 (122-231)||(5578620-5578730)
chr5 (153-312)||(37134741-37134902)
chr5 (122-297)||(6769310-6769482)
chr5 (125-231)||(42879580-42879687)
chr5 (122-268)||(29149635-29149782)
chr5 (125-231)||(9409564-9409671)
chr5 (122-377)||(16040055-16040308)
chr5 (122-257)||(38491019-38491156)
chr5 (126-228)||(13382615-13382718)
chr5 (342-417)||(23318485-23318560)
chr5 (122-258)||(7850287-7850425)
chr5 (123-196)||(20892315-20892388)
chr5 (273-413)||(23151541-23151681)
chr5 (122-231)||(13490372-13490482)
chr5 (126-196)||(18889054-18889124)
chr5 (122-228)||(23962832-23962939)
chr5 (122-196)||(2676947-2677021)
chr5 (221-318)||(20891318-20891416)
chr5 (239-312)||(23319701-23319775)
chr5 (300-397)||(29150502-29150599)
chr5 (465-514)||(8806027-8806076)
chr5 (129-196)||(16686726-16686794)
chr5 (163-263)||(14651716-14651818)
chr5 (122-171)||(40583628-40583677)
[»] chr3 (29 HSPs)
chr3 (125-414)||(30190997-30191288)
chr3 (122-389)||(29713788-29714053)
chr3 (122-406)||(10992911-10993194)
chr3 (125-378)||(47184950-47185205)
chr3 (122-378)||(1424679-1424933)
chr3 (141-417)||(12893051-12893330)
chr3 (121-399)||(44663183-44663447)
chr3 (122-307)||(1698401-1698588)
chr3 (304-416)||(11830316-11830428)
chr3 (122-228)||(10994164-10994271)
chr3 (141-318)||(11639916-11640095)
chr3 (146-297)||(16876821-16876971)
chr3 (130-218)||(17147208-17147296)
chr3 (122-228)||(19157075-19157182)
chr3 (125-258)||(23044880-23045015)
chr3 (122-228)||(27941531-27941638)
chr3 (122-258)||(31884940-31885078)
chr3 (148-280)||(53472130-53472263)
chr3 (125-228)||(25071628-25071732)
chr3 (122-296)||(40145448-40145621)
chr3 (126-228)||(53076983-53077086)
chr3 (141-377)||(3917989-3918234)
chr3 (163-279)||(4127547-4127664)
chr3 (122-230)||(15760841-15760950)
chr3 (122-196)||(52448125-52448199)
chr3 (146-268)||(6024740-6024863)
chr3 (122-181)||(24927913-24927972)
chr3 (488-535)||(47185419-47185468)
chr3 (347-388)||(46947640-46947681)
[»] chr8 (27 HSPs)
chr8 (122-404)||(11648592-11648875)
chr8 (125-317)||(9382150-9382344)
chr8 (146-404)||(24190187-24190443)
chr8 (122-388)||(9137516-9137780)
chr8 (146-318)||(28374489-28374661)
chr8 (146-288)||(23232178-23232322)
chr8 (128-290)||(32073246-32073413)
chr8 (122-228)||(1981578-1981685)
chr8 (122-228)||(45117448-45117555)
chr8 (122-229)||(4432086-4432194)
chr8 (122-228)||(3762679-3762786)
chr8 (126-228)||(31597508-31597611)
chr8 (122-231)||(7972993-7973103)
chr8 (122-257)||(28509233-28509370)
chr8 (129-232)||(16729719-16729823)
chr8 (334-430)||(23232079-23232175)
chr8 (122-231)||(39906229-39906339)
chr8 (122-231)||(40971424-40971534)
chr8 (122-228)||(6927561-6927668)
chr8 (122-196)||(7263680-7263754)
chr8 (146-263)||(2879196-2879315)
chr8 (122-228)||(24682597-24682704)
chr8 (122-230)||(2807702-2807811)
chr8 (328-416)||(24682815-24682904)
chr8 (337-417)||(961163-961243)
chr8 (197-263)||(11994691-11994758)
chr8 (487-532)||(11648101-11648148)
[»] chr2 (38 HSPs)
chr2 (122-417)||(19091009-19091305)
chr2 (129-417)||(13597700-13597989)
chr2 (122-318)||(30386836-30387033)
chr2 (243-439)||(31548966-31549162)
chr2 (125-375)||(14904009-14904261)
chr2 (122-378)||(25621421-25621678)
chr2 (122-318)||(38566131-38566321)
chr2 (122-417)||(6882980-6883278)
chr2 (122-318)||(10022892-10023090)
chr2 (122-398)||(11199129-11199407)
chr2 (122-301)||(9057382-9057561)
chr2 (122-228)||(33054755-33054862)
chr2 (122-257)||(7880344-7880481)
chr2 (122-388)||(38422792-38423058)
chr2 (122-388)||(41302303-41302569)
chr2 (122-399)||(24484458-24484734)
chr2 (122-196)||(41422923-41422997)
chr2 (122-231)||(41825976-41826086)
chr2 (125-258)||(29303152-29303287)
chr2 (122-231)||(2554038-2554148)
chr2 (122-258)||(19678001-19678139)
chr2 (122-231)||(22575996-22576106)
chr2 (122-231)||(27861833-27861943)
chr2 (122-228)||(44314058-44314165)
chr2 (122-228)||(44322237-44322344)
chr2 (122-228)||(45277506-45277613)
chr2 (126-196)||(19685779-19685849)
chr2 (329-414)||(43673105-43673191)
chr2 (122-263)||(2565594-2565737)
chr2 (146-263)||(18781161-18781280)
chr2 (122-228)||(33015208-33015315)
chr2 (122-196)||(6221368-6221442)
chr2 (172-287)||(41422808-41422921)
chr2 (122-169)||(31549160-31549207)
chr2 (163-263)||(90308-90410)
chr2 (188-256)||(25416047-25416117)
chr2 (465-532)||(31548851-31548920)
chr2 (122-167)||(25416114-25416159)
[»] chr4 (32 HSPs)
chr4 (127-410)||(41509027-41509310)
chr4 (122-318)||(10142125-10142323)
chr4 (141-416)||(10373196-10373474)
chr4 (122-404)||(1843000-1843280)
chr4 (122-398)||(52458998-52459276)
chr4 (122-398)||(52460255-52460533)
chr4 (126-404)||(9921694-9921969)
chr4 (122-318)||(21319994-21320192)
chr4 (122-301)||(29282952-29283132)
chr4 (131-279)||(42512194-42512344)
chr4 (122-263)||(13957232-13957375)
chr4 (165-377)||(24611216-24611430)
chr4 (122-228)||(10095037-10095144)
chr4 (122-231)||(39480263-39480373)
chr4 (122-231)||(6261593-6261703)
chr4 (122-196)||(7413791-7413865)
chr4 (122-196)||(7459872-7459946)
chr4 (122-254)||(3665451-3665584)
chr4 (122-258)||(28143439-28143577)
chr4 (146-258)||(51337648-51337762)
chr4 (125-231)||(36213718-36213824)
chr4 (147-234)||(9900071-9900159)
chr4 (125-193)||(23935828-23935896)
chr4 (169-311)||(25201039-25201183)
chr4 (122-263)||(14192302-14192445)
chr4 (342-417)||(25201197-25201272)
chr4 (274-356)||(3665324-3665406)
chr4 (326-404)||(9896383-9896460)
chr4 (335-388)||(6830670-6830723)
chr4 (122-177)||(24612043-24612098)
chr4 (168-268)||(51890406-51890508)
chr4 (168-268)||(51890680-51890782)
[»] chr1 (26 HSPs)
chr1 (126-388)||(24185519-24185782)
chr1 (146-417)||(5509680-5509953)
chr1 (152-318)||(47559476-47559642)
chr1 (122-377)||(5209545-5209802)
chr1 (122-378)||(12027769-12028027)
chr1 (122-318)||(47397450-47397649)
chr1 (122-229)||(49229351-49229459)
chr1 (122-234)||(36296675-36296788)
chr1 (122-229)||(25095147-25095255)
chr1 (129-290)||(9023202-9023365)
chr1 (122-231)||(23664120-23664230)
chr1 (122-234)||(42722210-42722323)
chr1 (122-228)||(17967339-17967446)
chr1 (122-228)||(48596367-48596474)
chr1 (122-258)||(28945803-28945941)
chr1 (126-228)||(5049441-5049544)
chr1 (126-228)||(21906365-21906468)
chr1 (122-228)||(22070485-22070592)
chr1 (126-228)||(34307461-34307564)
chr1 (126-196)||(48999389-48999459)
chr1 (129-217)||(48646143-48646232)
chr1 (126-228)||(27430805-27430908)
chr1 (123-217)||(12783996-12784090)
chr1 (122-196)||(44310437-44310511)
chr1 (122-230)||(26221657-26221766)
chr1 (298-398)||(44310547-44310647)
[»] chr7 (34 HSPs)
chr7 (126-387)||(40934035-40934297)
chr7 (122-417)||(21863581-21863877)
chr7 (125-286)||(39038847-39039010)
chr7 (146-410)||(9420461-9420727)
chr7 (148-318)||(28460165-28460338)
chr7 (122-413)||(5770859-5771141)
chr7 (122-289)||(43179378-43179546)
chr7 (146-417)||(45445899-45446165)
chr7 (123-287)||(8604552-8604718)
chr7 (122-229)||(24441941-24442049)
chr7 (122-234)||(48636675-48636788)
chr7 (128-230)||(29636904-29637007)
chr7 (141-297)||(35118193-35118348)
chr7 (125-230)||(41822148-41822254)
chr7 (133-378)||(8113779-8114024)
chr7 (122-258)||(6189387-6189525)
chr7 (129-232)||(20394796-20394900)
chr7 (149-258)||(8069580-8069691)
chr7 (122-228)||(8389314-8389421)
chr7 (126-228)||(31072539-31072642)
chr7 (122-196)||(4539848-4539922)
chr7 (123-268)||(44733619-44733764)
chr7 (122-258)||(48238433-48238570)
chr7 (122-196)||(13754097-13754171)
chr7 (122-196)||(18667350-18667424)
chr7 (122-196)||(35478025-35478099)
chr7 (128-196)||(23381092-23381160)
chr7 (125-231)||(135639-135746)
chr7 (147-287)||(3124209-3124354)
chr7 (337-416)||(39038750-39038829)
chr7 (147-196)||(1623572-1623621)
chr7 (163-263)||(19311919-19312021)
chr7 (151-187)||(15991930-15991966)
chr7 (122-186)||(36628441-36628505)
[»] scaffold0263 (1 HSPs)
scaffold0263 (122-417)||(18424-18721)
[»] chr6 (24 HSPs)
chr6 (125-378)||(11680721-11680976)
chr6 (122-318)||(19107918-19108112)
chr6 (149-356)||(3229087-3229292)
chr6 (122-318)||(31129727-31129920)
chr6 (122-228)||(1422937-1423044)
chr6 (122-356)||(26817340-26817575)
chr6 (122-257)||(33516611-33516748)
chr6 (122-231)||(18675335-18675445)
chr6 (131-233)||(1131765-1131868)
chr6 (241-413)||(22524816-22524988)
chr6 (122-228)||(15060148-15060255)
chr6 (122-228)||(22012131-22012238)
chr6 (122-228)||(34043526-34043633)
chr6 (122-196)||(20990419-20990493)
chr6 (122-196)||(1603352-1603426)
chr6 (120-229)||(4065601-4065711)
chr6 (164-228)||(21442661-21442726)
chr6 (141-196)||(26212911-26212966)
chr6 (476-514)||(15603786-15603824)
chr6 (489-551)||(1831209-1831273)
chr6 (120-227)||(4090808-4090916)
chr6 (122-228)||(12269381-12269487)
chr6 (163-196)||(22524749-22524782)
chr6 (487-515)||(11680480-11680508)
[»] scaffold1266 (1 HSPs)
scaffold1266 (122-417)||(1295-1592)
[»] scaffold0160 (1 HSPs)
scaffold0160 (122-356)||(25100-25336)
[»] scaffold0178 (1 HSPs)
scaffold0178 (122-284)||(2387-2551)
[»] scaffold0116 (1 HSPs)
scaffold0116 (122-402)||(40798-41076)
[»] scaffold0002 (2 HSPs)
scaffold0002 (169-417)||(98176-98425)
scaffold0002 (120-171)||(119420-119471)
[»] scaffold1364 (1 HSPs)
scaffold1364 (169-417)||(873-1127)
[»] scaffold0743 (1 HSPs)
scaffold0743 (122-258)||(3287-3425)
[»] scaffold0016 (4 HSPs)
scaffold0016 (122-231)||(87645-87755)
scaffold0016 (122-228)||(88122-88229)
scaffold0016 (122-228)||(88598-88705)
scaffold0016 (122-228)||(89074-89181)
[»] scaffold0093 (1 HSPs)
scaffold0093 (126-196)||(50914-50984)
[»] scaffold0137 (1 HSPs)
scaffold0137 (274-377)||(21299-21402)
[»] scaffold0552 (1 HSPs)
scaffold0552 (335-388)||(10171-10224)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 6e-88; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 132 - 439
Target Start/End: Complemental strand, 8806430 - 8806122
Alignment:
Q  132 taatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatggg 231  Q
    |||||||  |||| |||||||||||||||  | ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| |    
T  8806430 taatgtgcctcactaatattaaaaatatttgtcatatttattatccaagaaattgggataattttataacaaaacaaattatattttagttgaaaatgag 8806331  T
Q  232 cctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataagga 330  Q
      |  || ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||  |||| |||||    
T  8806330 tatagtaaagaaattaattttaatcttgtctttcaaaggtttcaaaaatttaaattatatcattatagtaatgtcaactttcttgaattgattaaaagga 8806231  T
Q  331 ttacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgggtctattgttctc 430  Q
    || ||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| | || ||||||||||||||||||| ||||  |||||||||||    
T  8806230 ttgcaaaattgaatttgataatacaaaatcatgtgagacgcattcatgatcatgaaatcgatgtgagacgcatttaggatcacgtggacctattgttctc 8806131  T
Q  431 gggtgctaa 439  Q
     || |||||    
T  8806130 aggcgctaa 8806122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 146 - 441
Target Start/End: Original strand, 3654678 - 3654974
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatgggcctt-tagagaaat 244  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||||||| || |||  |||||||||||| |||||||||| |||  ||||||||     
T  3654678 aatattaaaaatattgatgatatttattatccaagaaattaagataattttattacaaaataaattatattttagttgaaaatggacctactagagaaac 3654777  T
Q  245 taattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaat 344  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||| || || ||||||||||||||| |||||  |||| |  |||| |||||||||||    
T  3654778 taattttaatcttgtctttcaaaggttcaaaaaaattaaattatatcatcatagtaatgtcaactttcttgaattgattaaagagattgcaaaattaaat 3654877  T
Q  345 ttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgggtctattgttctcgggtgctaata 441  Q
    |||| |||||||||| |||  ||||||||| |||||||||||||  || |||||| ||||||| ||||||||   || |||||||| ||||| ||||    
T  3654878 ttgagaatgcaaaatcatgcaagacgcatttatgatcatgaaactgatatgagacacatttagaatcatgtgaccctgttgttctcaggtgccaata 3654974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 122 - 417
Target Start/End: Complemental strand, 38915836 - 38915540
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    |||||||||||||||||  |||| ||||||||| |||||  | ||||||||||||||||||||||||||||||||||||| |||  |  ||||||||| |    
T  38915836 ttgttcctaataatgtgcctcactaatattaaatatattagtcatatttattatccaagaaattgggataattttataacaaaaaaatatatattttagt 38915737  T
Q  222 tgaaaatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataa 320  Q
    ||||||| |||||  ||||||||||| | ||||| |||||||| ||||||| ||||||||||||||||||  |||| |||||||||||||||  ||||      
T  38915736 tgaaaataggcctactagagaaattagtcttaatgttgtctttcaaaggttccaaaaaattaaattatatcgttatagtaatgtcaactttctagaattg 38915637  T
Q  321 attataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    || | ||||||| ||||||| ||||||||||||| |||| ||| || |||||||||||||||| ||||  || || |||||||||||||||||||||    
T  38915636 ataaaaaggattgcaaaattgaatttgataatgctaaatcatgcgatacgcattcatgatcattaaactgatgtgggacgcatttaggatcatgtgg 38915540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 122 - 417
Target Start/End: Original strand, 29789527 - 29789824
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||| ||||||  ||||  |||| |||||||| | ||||||||||||||||||||||||| |||||||| ||||| |||| |||| |||||||     
T  29789527 ttgttcctaaaaatgtgcctcactgatataaaaaatatcggtgatatttattatccaagaaattggaataattttcataacaaaacaaattctattttag 29789626  T
Q  221 ttgaaaatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||||| ||  ||||||||||||| |||||||||| ||| |||| |||||||||| |||||||||| | ||| |||| |||||||||| |||||     
T  29789627 ttgaaaatgggtctactagagaaattaatcttaatcttgtttttcaaagatttcaaaaaaataaattatatcaatatagtaacgtcaactttcatgaatt 29789726  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
     ||||  ||| || || |||| ||| |||||||| || || ||| ||||| ||||||||||||||| ||| || |||||||||||| |||||||||||    
T  29789727 gattaagagggttgcacaattgaatatgataatgtaagatcatgcgagacacattcatgatcatgagaccgatgtgagacgcatttgggatcatgtgg 29789824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 122 - 356
Target Start/End: Complemental strand, 13826342 - 13826101
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||     
T  13826342 ttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggataattttcataacaaaacaaattctattttag 13826243  T
Q  221 ttgaaaatg-ggcctt--tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaat---taaattatataattatggtaatgtcaactttcgt 314  Q
    ||||||||  || |||  |||| |||||||| |||||||||||| | |||  || ||||||||   |||||||||| | ||| ||||||||||||||| |    
T  13826242 ttgaaaatatgggcttactagataaattaatcttaatcttgtctctcaaaaattccaaaaaataaataaattatatcaatatagtaatgtcaactttctt 13826143  T
Q  315 gaataaattataaggattacaaaattaaatttgataatgcaa 356  Q
    ||||  ||   ||||||| || |||| |||||||||||||||    
T  13826142 gaattgatcgaaaggatttcataattgaatttgataatgcaa 13826101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 122 - 415
Target Start/End: Complemental strand, 5121312 - 5121015
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||  |||||||||||||||| ||||||||||||||||| ||||||  |||||||| ||||  |||| |||| |||||||     
T  5121312 ttgttcctaataatgtggctcaataatattaaaaatattggtgatatttattatccaaaaaattgaaataattttcataataaaacaaattttattttaa 5121213  T
Q  221 ttgaaaatgggcct-ttagagaaat--taattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaa 317  Q
    ||||||||  ||||  |||||||||  |||| |||||||||||||| |||||||  |||||| |||||||||| | ||| || |||||||||||| ||||    
T  5121212 ttgaaaattagcctactagagaaattataatcttaatcttgtctttcaaaggttctaaaaaaataaattatatcaatatagtgatgtcaactttcttgaa 5121113  T
Q  318 taaattataaggattacaaaattaaatttgataatgcaaa-attatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgt 415  Q
    |   ||  ||||||| || |||| |||||||||||||||| || |||  |||| |||| |||||| ||||    || ||||||||||||||||||||||    
T  5121112 ttgtttgaaaggattgcataattgaatttgataatgcaaagatcatgcaagacacatt-atgatcctgaactagatgtgagacgcatttaggatcatgt 5121015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 118 - 417
Target Start/End: Complemental strand, 13820995 - 13820691
Alignment:
Q  118 gtccttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatatt 216  Q
    ||||| |||||||||||||||  |||| || ||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| |||| || | ||||    
T  13820995 gtcctagttcctaataatgtgtctcactaacattaaaaatattggtcatatttattattcaagaaatttggataattttcataacaaaacaaaatctatt 13820896  T
Q  217 ttacttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaa---ttaaattatataattatggtaatgtcaactttc 312  Q
    ||| ||||||||||| ||  || | |||||||| | |||||||||||| ||||  |  ||||||     ||||||||| | ||| |||||||||||||||    
T  13820895 ttagttgaaaatgggtctactaaataaattaatctaaatcttgtctttcaaagaataaaaaaaaaatacaaattatatcaatatagtaatgtcaactttc 13820796  T
Q  313 gtgaataaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatca 412  Q
     | |||  |||| ||||||| || |||| ||||||||| ||||| || |||  ||||||||||| | |||||||||| || |||| ||||||| ||||||    
T  13820795 ttaaattgattaaaaggattgcataattgaatttgatagtgcaacatcatgcaagacgcattcacgttcatgaaaccgatgtgaggcgcatttgggatca 13820696  T
Q  413 tgtgg 417  Q
     ||||    
T  13820695 cgtgg 13820691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 125 - 374
Target Start/End: Complemental strand, 43171518 - 43171272
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttga 224  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| | |||| |||||||||    |  ||| ||| |||||||| ||||    
T  43171518 ttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaatatattgagataatttt----cataacaaatgatattttagttga 43171423  T
Q  225 aaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaatt 323  Q
    |||||| |||  ||||||||||||| ||||| || | ||| ||||||| ||||||| ||||||| || | ||| ||||||||||||||| | |||  ||     
T  43171422 aaatggacctactagagaaattaatcttaattttttttttcaaaggttccaaaaaaataaattacatcaatatagtaatgtcaactttctttaattgatc 43171323  T
Q  324 ataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcatt 374  Q
      || |||| || | |||||||||||||||||| || ||| ||||| ||||    
T  43171322 gaaatgattgcatagttaaatttgataatgcaagatcatgcgagacacatt 43171272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 5578730 - 5578620
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  5578730 ttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 5578631  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  5578630 ttgaaaatggg 5578620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 153 - 312
Target Start/End: Original strand, 37134741 - 37134902
Alignment:
Q  153 aaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattt 250  Q
    |||| |||| |||||||||||||| |||||||||| |||||||| ||||| |||| |||||||||||| ||||||||   |||  |||| | ||||||||    
T  37134741 aaaaaattggtgatatttattatctaagaaattggaataattttcataacaaaacaaattatattttagttgaaaatacacctactagaaatattaattt 37134840  T
Q  251 taatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttc 312  Q
    | ||||||||||| ||||||||| ||||| |||||||||| | ||| |||||||||| ||||    
T  37134841 tgatcttgtctttcaaaggtttcgaaaaaataaattatatcaatatagtaatgtcaattttc 37134902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 6769482 - 6769310
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    ||||| |||||||||||  |||  ||||||||| |||||| | |||||||||||||||||||||  || ||||||||||| |||| |||||||||||| |    
T  6769482 ttgtttctaataatgtgcctcaataatattaaatatattgatcatatttattatccaagaaatt--gagaattttataacaaaacaaattatattttagt 6769385  T
Q  222 tgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatg 297  Q
    | |||||  ||| |   |||||||||||||||| |||||||| |||  || |||||||||||||||||| ||||||    
T  6769384 taaaaataagcc-tactagaaattaattttaatgttgtctttgaaattttccaaaaaattaaattatatcattatg 6769310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 42879580 - 42879687
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataa-ttttataaccaaactaattatattttacttg 223  Q
    |||||||||||||| ||||| ||||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||| || | |||| ||||||| |||    
T  42879580 ttcctaataatgtgtttcactaatattaaaaatattgacgatattttttatccaagaaattgggataatttttataacaaagcaaattctattttagttg 42879679  T
Q  224 aaaatggg 231  Q
    ||||||||    
T  42879680 aaaatggg 42879687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 122 - 268
Target Start/End: Original strand, 29149635 - 29149782
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||  |||||||||||||||  ||||||||||||||||| |||||| ||||||||| |||| ||| | |||| |||||||     
T  29149635 ttgttcctaataatgtgcctcattaatattaaaaatatttgtgatatttattatccaaaaaattgagataattttcataa-caagcaaattttattttag 29149733  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaag 268  Q
    ||||||||  ||||  ||||||||||||| |||||||||||||| ||||    
T  29149734 ttgaaaatcagcctactagagaaattaatcttaatcttgtctttcaaag 29149782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 9409671 - 9409564
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    |||||||||||||| ||||| |||||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||| || | |||| ||||||| |||    
T  9409671 ttcctaataatgtgcttcactaatattaaaaatatcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattttagttg 9409572  T
Q  224 aaaatggg 231  Q
    ||||||||    
T  9409571 aaaatggg 9409564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 122 - 377
Target Start/End: Complemental strand, 16040308 - 16040055
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| ||| | |||||||||| |||||||| ||||| ||||||||| ||||||||| ||||| |||| |||  |||||||     
T  16040308 ttgttcctaataatgtgtctcactaatttaaaaaatattggtgatattttttatcaaagaaattgagataattttcataacaaaacaaatcttattttaa 16040209  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||||||||  |||||| |||||| ||||| || ||||| |||  || ||||||   ||| ||||| | |||  |||||||| ||||| |||||     
T  16040208 ttgaaaatgggcctactagagatattaatcttaatattatctttcaaa-attccaaaaa---aaactatatcaatataataatgtcatctttcttgaatt 16040113  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcat 377  Q
     |||  ||||||| || |||| ||||||||||||||| || ||| || || |||||||    
T  16040112 gattgaaaggattgcagaattgaatttgataatgcaagatcatgcgaaacacattcat 16040055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 38491019 - 38491156
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||| ||| |||||| ||||| |||| ||||||||||||     
T  38491019 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattaggagaattttcataacaaaacaaattatattttag 38491118  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatctt 257  Q
    ||||||||||||||  |||| |||||||| ||||||||    
T  38491119 ttgaaaatgggcctactagataaattaatcttaatctt 38491156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 13382718 - 13382615
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||| ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||  |||| || | |||| ||||||| ||||    
T  13382718 tcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttga 13382619  T
Q  225 aaat 228  Q
    ||||    
T  13382618 aaat 13382615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 417
Target Start/End: Complemental strand, 23318560 - 23318485
Alignment:
Q  342 aatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    |||||||||||||||||| ||| |||| |||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  23318560 aatttgataatgcaaaatcatgcgagatgcattcattatcatgaaactaatgtgagacgcatttaggatcatgtgg 23318485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 7850287 - 7850425
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  |||||| || |||||| ||||| |||| ||||||||||||     
T  7850287 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgagagaattttcataacaaaacaaattatattttag 7850386  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    |||||||||| |||  | ||||||||||| |||||||||    
T  7850387 ttgaaaatggacctactggagaaattaatcttaatcttg 7850425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 20892388 - 20892315
Alignment:
Q  123 tgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||||||  |||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  20892388 tgttcctaataatgtgcctcactaatattaaaaatattgatgatatttattttccaagaatttgggataatttt 20892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 273 - 413
Target Start/End: Original strand, 23151541 - 23151681
Alignment:
Q  273 caaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgca 372  Q
    ||||||| |||||||||| | ||  |||||||||| |||| |||||  |||  ||||||| ||||||| ||||||||| ||||| || ||| |||| |||    
T  23151541 caaaaaaataaattatatcaatactgtaatgtcaaatttcttgaattgattgaaaggattgcaaaattgaatttgatattgcaagatcatgcgagatgca 23151640  T
Q  373 ttcatgatcatgaaaccaatttgagacgcatttaggatcat 413  Q
    ||||||||||||||||| || | ||||||||| | ||||||    
T  23151641 ttcatgatcatgaaaccgatgtaagacgcattcatgatcat 23151681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 13490372 - 13490482
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||| |||||||||||||| |   |||||||||||||||||||||| ||| ||||| ||||| || | |||| |||||||     
T  13490372 ttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagatgattttcataacaaagcaaattctattttag 13490471  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  13490472 ttgaaaatggg 13490482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 18889054 - 18889124
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||| |||||||||    
T  18889054 tcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataatttt 18889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 23962832 - 23962939
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||| ||| ||||  ||||||||||||||    ||||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  23962832 ttgttcctaataacgtgcttcattaatattaaaaatatcaacgatatttattatccaagaaattgagataattttcataacaaagcaaattctattttag 23962931  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  23962932 ttgaaaat 23962939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 2676947 - 2677021
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||||||| ||||  |||||||||||||| |  |||||||||||||||||||||  ||||||||||    
T  2676947 ttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataatttt 2677021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 20891416 - 20891318
Alignment:
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||||||||||||| |||||||||||||| ||||| |||||||| |||| || | ||||| |||||||||| | ||| | ||||||||||||| |||||    
T  20891416 ttgaaaatgggcctattagagaaattaatcttaattttgtctttcaaagattcccaaaaaataaattatattaatatagaaatgtcaactttcttgaat 20891318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 23319775 - 23319701
Alignment:
Q  239 agaaattaattttaatcttgtcttttaaaggtttcaaaaaa-ttaaattatataattatggtaatgtcaactttc 312  Q
    |||||||||| ||||| |||||||| || |||||||||||| ||||||||||| | ||| |||||||||||||||    
T  23319775 agaaattaatcttaattttgtctttcaagggtttcaaaaaaattaaattatatcaatatagtaatgtcaactttc 23319701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 397
Target Start/End: Original strand, 29150502 - 29150599
Alignment:
Q  300 aatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgag 397  Q
    ||||||||||||| |||||  |||  || |||| || |||| || |||||||||||| || ||||| |||||||||||||| ||||||||||| ||||    
T  29150502 aatgtcaactttcttgaattgattgaaaagattgcataattgaagttgataatgcaatatcatgtgtgacgcattcatgattatgaaaccaatatgag 29150599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 514
Target Start/End: Complemental strand, 8806076 - 8806027
Alignment:
Q  465 tgagacgcgtttagtaatgtaaacttttttggtgttattattcttaggtg 514  Q
    |||||||| ||||||||||| ||||||||| ||||||||| |||||||||    
T  8806076 tgagacgcatttagtaatgtcaactttttttgtgttattactcttaggtg 8806027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 16686794 - 16686726
Alignment:
Q  129 taataatgtgattcacgaatattaaaaa-tattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||  |||| ||||||||||| ||||  ||||||||||||||| |||||||||||| |||||    
T  16686794 taataatgtgtctcactaatattaaaaaatattagtgatatttattatccgagaaattgggatgatttt 16686726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 14651818 - 14651716
Alignment:
Q  163 tgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatcttgtc 260  Q
    |||||||| |||||||  ||||||| | ||| || ||||| |||| ||| |||||||| |||||||||||||| ||||| |||||||| ||||| ||| |    
T  14651818 tgatatttgttatccagaaaattggaagaatcttcataacaaaacgaataatattttagttgaaaatgggcctattagaaaaattaatcttaatattgcc 14651719  T
Q  261 ttt 263  Q
    |||    
T  14651718 ttt 14651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 40583628 - 40583677
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatattta 171  Q
    |||||||||||||||||  |||| ||||||||| |||||| |||||||||    
T  40583628 ttgttcctaataatgtgtgtcactaatattaaagatattggtgatattta 40583677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 8e-78; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 125 - 414
Target Start/End: Complemental strand, 30191288 - 30190997
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttga 224  Q
    |||||||||||||| ||||| ||||||||| |||||  | ||||||||||||||| |||||| |||||||||||||| |||  |||||||||||| ||||    
T  30191288 ttcctaataatgtgtttcactaatattaaatatattagtcatatttattatccaaaaaattgagataattttataacaaaagaaattatattttagttga 30191189  T
Q  225 aaatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaa-ttaaattatataattatggtaatgtcaactttcgtgaataaat 322  Q
    |||| |||||  ||||||||||||| ||||| |||||||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||||| |||||  ||    
T  30191188 aaataggcctactagagaaattaatcttaatgttgtctttcaaatgttccaaaaaaattaaattatataattatagtaatgtcaactttcttgaattgat 30191089  T
Q  323 tataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatg 414  Q
    || ||||||| ||||||| ||||||||||||| |||| ||| ||||||||||||||||||||||||  || |||||||||||||||||||||    
T  30191088 taaaaggattgcaaaattgaatttgataatgctaaatcatgcgagacgcattcatgatcatgaaactgatgtgagacgcatttaggatcatg 30190997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 122 - 389
Target Start/End: Original strand, 29713788 - 29714053
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||| |||||||||||  |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||     
T  29713788 ttgttactaataatgtgcctcactaatattaaaaatattggtgatatttattatctaagaaattgggataattttcataacaaaacaaattatattttag 29713887  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataa 320  Q
    ||||||||| ||||     ||||||||| ||||||||||||||  | |||| ||||||| |||||||||| | ||| |||||||||| |||| |||||      
T  29713888 ttgaaaatgagcct---acgaaattaatcttaatcttgtctttctatggttccaaaaaaataaattatatcaatattgtaatgtcaaatttcttgaattg 29713984  T
Q  321 attataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaacc 389  Q
    |||  ||||||| ||||||| ||||| ||| ||||| || |||||||||||||||||||||||||||||    
T  29713985 attgaaaggattgcaaaattgaatttaatattgcaagatcatgtgagacgcattcatgatcatgaaacc 29714053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 122 - 406
Target Start/End: Complemental strand, 10993194 - 10992911
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||| ||||  ||||||     
T  10993194 ttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatccaagaaatttggataattttcataacaaaacaaatttcattttag 10993095  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttt-taaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||| ||||     ||||||||||||| |||||||||| ||    |  ||||||| |||||||||| | ||| ||||||||||||||| |||||     
T  10993094 ttgaaaatgagcct---acgaaattaattttattcttgtctttctacccttcccaaaaaaataaattatatcaatattgtaatgtcaactttcttgaatt 10992998  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcattta 406  Q
     |||  ||||||| ||||||| ||||||||| ||||| || ||| |||||||||||| |||||||||||| || ||| |||||||||    
T  10992997 gattgaaaggattgcaaaattgaatttgatattgcaagatcatgcgagacgcattcaagatcatgaaaccgatgtgaaacgcattta 10992911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 125 - 378
Target Start/End: Original strand, 47184950 - 47185205
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    |||||||||||||  ||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||| |||    
T  47184950 ttcctaataatgttcttcactaatattacaaatattggtgatatttattatccaataaattgggataattttcataacaaaacaaattatattttagttg 47185049  T
Q  224 aaaatgg-gcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaat 322  Q
    |||||||  ||  ||||||||||||| |||||||||||||| ||||||| |||||||  |||||| || | |||  |||||||||||||| |||||  ||    
T  47185050 aaaatggacccactagagaaattaatcttaatcttgtctttcaaaggttccaaaaaaacaaattacatcaatataataatgtcaactttcttgaattgat 47185149  T
Q  323 tataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatg 378  Q
    |  || |||| || | || ||||||||| | |||||| ||||||||| ||||||||    
T  47185150 tgaaatgattgcatagttgaatttgatagtacaaaatcatgtgagacacattcatg 47185205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 122 - 378
Target Start/End: Original strand, 1424679 - 1424933
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    |||||||||||||||||  |||| ||||||| |  ||||  |  |||||||||||||||||||||||||||||||||||| |||  ||| |||||||| |    
T  1424679 ttgttcctaataatgtgcctcactaatattata--tattagtcgtatttattatccaagaaattgggataattttataacaaaaaaaat-atattttagt 1424775  T
Q  222 tgaaaatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataa 320  Q
    ||||||| |||||  ||||||||||||| ||||| |||||| | ||||||| ||||||||||||||||||  |||| |||||||||||||||  ||||      
T  1424776 tgaaaataggcctactagagaaattaatcttaatgttgtctatcaaaggttccaaaaaattaaattatatcgttatagtaatgtcaactttctagaattg 1424875  T
Q  321 attataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatg 378  Q
    || | ||||||| ||||||| ||||||||||||| |||| ||| || |||||||||||    
T  1424876 ataaaaaggattgcaaaattgaatttgataatgctaaatcatgcgatacgcattcatg 1424933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 141 - 417
Target Start/End: Original strand, 12893051 - 12893330
Alignment:
Q  141 tcacgaatattaaaaatattgctgatatttattatccaagaaattgggataa-ttttataaccaaactaattatattttacttgaaaatgggcct-ttag 238  Q
    |||| ||||||||| |||||| |||| ||||||||||||||||||| ||||| ||||||||  ||||  ||| ||||||| |||||||||| |||  |||    
T  12893051 tcactaatattaaatatattggtgatgtttattatccaagaaattgagataatttttataagaaaacatattctattttagttgaaaatggacctactag 12893150  T
Q  239 agaaattaattttaatcttgtcttttaaaggtttc-aaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaa 337  Q
    ||||||||||||||||||| ||||| |||  || | |||||| |||||||||| |  || ||||||||||||||| |||||  |||| ||||||| || |    
T  12893151 agaaattaattttaatcttatctttcaaatattccaaaaaaaataaattatatcaacatagtaatgtcaactttcttgaattgattaaaaggattgcata 12893250  T
Q  338 attaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    ||| ||||||||||||||| ||  ||  | ||||||||||||| |||||||| || |||||| ||||| |||||||||||    
T  12893251 attgaatttgataatgcaagatcttgcaaaacgcattcatgattatgaaaccgatgtgagacacatttgggatcatgtgg 12893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 121 - 399
Target Start/End: Complemental strand, 44663447 - 44663183
Alignment:
Q  121 cttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatatttta 219  Q
    ||||||||||||||||||  |||| ||||||||| |||||| ||||||||||||||||||||||||  |||||||| | ||| |||| ||||||||||||    
T  44663447 cttgttcctaataatgtgcctcactaatattaaatatattggtgatatttattatccaagaaattgaaataattttcaaaacaaaacaaattatatttta 44663348  T
Q  220 cttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
     ||||||||| ||||  |   |||||| ||||||||||||||||  |||||| |||||||  |||      ||||      ||||||| |||| |||||     
T  44663347 gttgaaaatgagcctaca---aaattatttttaatcttgtctttctaaggttacaaaaaaaaaaa------aatt------atgtcaaatttcttgaatt 44663263  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagac 399  Q
     |||  ||||||| ||||||||||||||||| ||||| || ||| |||||| |||||| ||||||||||| || ||||||    
T  44663262 gattgaaaggattgcaaaattaaatttgatattgcaagatcatgcgagacgtattcattatcatgaaaccgatgtgagac 44663183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 122 - 307
Target Start/End: Original strand, 1698401 - 1698588
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||| ||||||||||| ||||| |||||||||||||| | |||||||||||||||||||||||| |||||||||  |||| |||| |||| ||||| |     
T  1698401 ttgtttctaataatgtgcttcactaatattaaaaatatcgatgatatttattatccaagaaattgagataattttcctaacaaaacaaattctatttaag 1698500  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaa 307  Q
    |||||||| ||  |  |||| |||||||| |||||||||||||| |||| || ||| ||| |||||||||| | ||| ||||||||||    
T  1698501 ttgaaaataggtttactagataaattaatcttaatcttgtctttgaaagattccaagaaaataaattatatcaatatagtaatgtcaa 1698588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 11830428 - 11830316
Alignment:
Q  304 tcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcat 403  Q
    ||||||||| |||||  |||| ||||||| ||||||| ||||||||||||| ||||  |||||||| ||||||||||||||||||  || ||||||||||    
T  11830428 tcaactttcttgaattgattaaaaggattgcaaaattgaatttgataatgctaaatcttgtgagacacattcatgatcatgaaactgatgtgagacgcat 11830329  T
Q  404 ttaggatcatgtg 416  Q
    |||||||||||||    
T  11830328 ttaggatcatgtg 11830316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 10994271 - 10994164
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||| | |||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||     
T  10994271 ttgttcctaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcataacaaagcaaattatattttag 10994172  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  10994171 ttgaaaat 10994164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 141 - 318
Target Start/End: Complemental strand, 11640095 - 11639916
Alignment:
Q  141 tcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttag 238  Q
    |||| |||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||| |||  |||| ||||||| |||||||||| |||  | |    
T  11640095 tcactaatattaaaaatatcgatgatatttattattcaagaaattgggataattttcataacaaaataaattttattttagttgaaaatggacctacttg 11639996  T
Q  239 agaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||||||||  ||||| | |||||| |||| || ||||||| |||||||||| | ||  |||||||||| |||| |||||    
T  11639995 agaaattaaccttaatatagtctttcaaagattccaaaaaaataaattatatcaatacagtaatgtcaattttcttgaat 11639916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 146 - 297
Target Start/End: Complemental strand, 16876971 - 16876821
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaat-gggcctttagagaaat 244  Q
    ||||||||| |||||| | |||||||||||||||||||||  || ||||||||||| |||| ||| |||||||| ||||||||  | |   |||||||||    
T  16876971 aatattaaatatattggtcatatttattatccaagaaatt--gagaattttataacaaaacaaataatattttagttgaaaataagtcaactagagaaat 16876874  T
Q  245 taattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatg 297  Q
    |||| ||||| |||||||| ||| ||| |||||||||||||||||| ||||||    
T  16876873 taatcttaatgttgtctttaaaatgttgcaaaaaattaaattatatcattatg 16876821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 17147208 - 17147296
Alignment:
Q  130 aataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatatttt 218  Q
    |||||||||  |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |||  |||||||||||    
T  17147208 aataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattggaataatttcataacaaaataaattatatttt 17147296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 19157075 - 19157182
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||  |||||||||||||| |  |||||||||||||||||||||  |||||||||| ||||| |||| |||| |||||||     
T  19157075 ttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataattttcataacaaaacaaattctattttag 19157174  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  19157175 ttgaaaat 19157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 23045015 - 23044880
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    ||||||||||||||  | || ||||||||||| ||   ||||||||||||||||  ||||||||| |||||| ||||| |||| |||||||||||| |||    
T  23045015 ttcctaataatgtgtcttactaatattaaaaagatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattatattttagttg 23044916  T
Q  224 aaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    |||||||||||  | ||||||||||| |||||||||    
T  23044915 aaaatgggcctactggagaaattaatcttaatcttg 23044880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 27941638 - 27941531
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||| ||||| ||||  |||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  27941638 ttgttcctaattatgtgcttcattaatattaaaaatatcgaagatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 27941539  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  27941538 ttgaaaat 27941531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 31885078 - 31884940
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatt-ttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||| | ||||| |||  ||||||||||||     
T  31885078 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggaaaattctcataacaaaataaattatattttag 31884979  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    |||||||||||| |  ||||||||||||| |||||||||    
T  31884978 ttgaaaatgggcatactagagaaattaatcttaatcttg 31884940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 148 - 280
Target Start/End: Original strand, 53472130 - 53472263
Alignment:
Q  148 tattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaatt 245  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||||| |||| |||||||||||| ||||||||| ||||  || | |||||    
T  53472130 tattaaaaa-attggtgaaatttattatccaagaaattgagataattttaataacaaaacaaattatattttagttgaaaatgagcctactacataaatt 53472228  T
Q  246 aattttaatcttgtcttttaaaggtttcaaaaaat 280  Q
    ||| |||||| ||| ||| ||||||| ||||||||    
T  53472229 aatcttaatcatgtatttcaaaggttccaaaaaat 53472263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 25071628 - 25071732
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    |||||||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||| ||||||||| |||||  | | |||| ||||||| |||    
T  25071628 ttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacagagcaaattctattttagttg 25071727  T
Q  224 aaaat 228  Q
    |||||    
T  25071728 aaaat 25071732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 296
Target Start/End: Original strand, 40145448 - 40145621
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    ||||| |||||||||||  |||| || |||||| | |||| | |||||||||||||||||| ||||   ||||||||||| |||| |||||||||||| |    
T  40145448 ttgtttctaataatgtgcctcactaacattaaatacattgttcatatttattatccaagaatttgg--aaattttataacaaaacaaattatattttagt 40145545  T
Q  222 tgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattat 296  Q
    | |||||  | ||  |||| |||||||| ||||| |||| ||||||| ||| |||| ||||||||||||| |||||    
T  40145546 tcaaaataagtctaatagaaaaattaatcttaatgttgttttttaaatgttccaaagaattaaattatatcattat 40145621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 53077086 - 53076983
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||  ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||  |||| || | |||| ||||||| ||||    
T  53077086 tcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttga 53076987  T
Q  225 aaat 228  Q
    ||||    
T  53076986 aaat 53076983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 377
Target Start/End: Complemental strand, 3918234 - 3917989
Alignment:
Q  141 tcacgaatattaaaaatattgctgatatttattatccaagaaa-ttgggataatttt-ataaccaaactaattatattttacttgaaaatgggccttta- 237  Q
    |||| |||||||||||| ||| |||||||||| |||||| ||| ||||||||||| | ||||| |||| |||| ||||||| ||||||||  || |  |     
T  3918234 tcactaatattaaaaatgttggtgatatttatcatccaaaaaagttgggataattctcataacaaaacaaattctattttagttgaaaatatgcttacaa 3918135  T
Q  238 gagaaattaattttaatcttgtcttttaaaggtttcaaaaaa------ttaaattatataattatggtaatgtcaactttcgtgaataaattataaggat 331  Q
    || ||||| || ||||| |||||||| |||| || |||||||      ||||||||||| | ||| ||||||||||||||| |||||  |||  ||| ||    
T  3918134 gataaatttatcttaatattgtctttcaaagattccaaaaaaaaaaaattaaattatatcaatatagtaatgtcaactttcttgaattgattgaaagaat 3918035  T
Q  332 tacaaaattaaatttgataatgcaaaattatgtgagacgcattcat 377  Q
    |  | |||| ||||||||||||||| || ||| |||||||||||||    
T  3918034 tgaataattgaatttgataatgcaagatcatgcgagacgcattcat 3917989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 163 - 279
Target Start/End: Original strand, 4127547 - 4127664
Alignment:
Q  163 tgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatcttgtct 261  Q
    |||||||||||||||||||||||| ||||||||| | | ||||| || ||| ||||| ||||||||  |  |  || |||||||||| ||||||||||||    
T  4127547 tgatatttattatccaagaaattgagataattttcttaacaaacaaagtattttttagttgaaaattagattgctacagaaattaatcttaatcttgtct 4127646  T
Q  262 tttaaaggtttcaaaaaa 279  Q
    || |||||||||||||||    
T  4127647 ttcaaaggtttcaaaaaa 4127664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 15760841 - 15760950
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| |||||| ||| ||||| ||| |||||||||| |  ||||||||||||||||||||||||||||||||| |||||  | | |||| |||||||     
T  15760841 ttgttcttaataacgtgcttcactaattttaaaaatatcgacgatatttattatccaagaaattgggataattttcataacatagcaaattttattttag 15760940  T
Q  221 ttgaaaatgg 230  Q
    ||||||||||    
T  15760941 ttgaaaatgg 15760950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 52448125 - 52448199
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||| |||||||||| ||||| |||||||||||||| |  |||||||||||||||||||||||  ||||||||    
T  52448125 ttgttcttaataatgtgtttcactaatattaaaaatatcgacgatatttattatccaagaaattgatataatttt 52448199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 268
Target Start/End: Complemental strand, 6024863 - 6024740
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttacttgaaaatgggcct-ttagagaaa 243  Q
    ||||||||||||||   ||||||||||||||||  ||||||||| ||| || ||||| |||| ||| |||||||| | ||||||||||||  |||| |||    
T  6024863 aatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataatattttagtagaaaatgggcctactagaaaaa 6024764  T
Q  244 ttaattttaatcttgtcttttaaag 268  Q
    ||||| ||||||||| |||||||||    
T  6024763 ttaatcttaatcttg-cttttaaag 6024740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 24927972 - 24927913
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaaga 181  Q
    |||||| |||||||||| ||||| |||||||||||||| |  ||||||||||||||||||    
T  24927972 ttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaaga 24927913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 535
Target Start/End: Original strand, 47185419 - 47185468
Alignment:
Q  488 cttttttggtgttattattcttaggtgt--aaattgcagtctacttcaca 535  Q
    ||||| ||||||||||||||||||||||  ||||| ||||||||||||||    
T  47185419 cttttctggtgttattattcttaggtgtcaaaatttcagtctacttcaca 47185468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 46947640 - 46947681
Alignment:
Q  347 gataatgcaaaattatgtgagacgcattcatgatcatgaaac 388  Q
    |||||||||| || |||||||||||||||||||||| |||||    
T  46947640 gataatgcaagatcatgtgagacgcattcatgatcaagaaac 46947681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 122 - 404
Target Start/End: Complemental strand, 11648875 - 11648592
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||| |||||||||||| |    
T  11648875 ttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatcaaagaaattgagataattttataacaaaacaaattatattttagt 11648776  T
Q  222 tgaaaatgggc-ctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataa 320  Q
    ||||||||| | | |||||||||||||| | |||||||||||| ||||||| |||| ||||||||||||| |||||  ||| || ||||||| |||||      
T  11648775 tgaaaatggactcattagagaaattaatctcaatcttgtctttcaaaggttccaaataattaaattatatcattatactaaggttaactttcttgaattg 11648676  T
Q  321 attataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatt 404  Q
    |||| || |||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| || |||||||||||    
T  11648675 attaaaatgattgcaaaattgaatttgataatgcaaaatcatgcgagacacattcatgatcatgaaaccgatgtgagacgcatt 11648592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 125 - 317
Target Start/End: Complemental strand, 9382344 - 9382150
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||| |||| ||  ||||||||||||||| ||||| |||| |||||||||||| |||    
T  9382344 ttcctaataatgtgcttcactaatattaaaaatattggtgatatttactatctaatgaattgggataattttcataacaaaacaaattatattttagttg 9382245  T
Q  224 aaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaa 317  Q
    ||||||| ||| ||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||| || | ||| ||||||||||||||| ||||    
T  9382244 aaaatggacctattagaaaaattaattttaatcttttctttcaaaggttccaaaaaattaaattacatcaatatagtaatgtcaactttcttgaa 9382150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 146 - 404
Target Start/End: Complemental strand, 24190443 - 24190187
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataa-ttttataaccaaactaattatattttacttgaaaatgggcctttagagaaat 244  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| | ||     ||| |    
T  24190443 aatattaaaaatattgatgatatttattatccaagaaattgggataatttttataacaaaacaaattatattttagttgaaaatgagtct---acgaagt 24190347  T
Q  245 taattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaat 344  Q
    |||| ||||| ||||||||  | |||||||||||| |||||||||| | ||| ||||||||||||||  |||||  |||  ||||||| ||||||| |||    
T  24190346 taatcttaattttgtctttctatggtttcaaaaaaataaattatatcaatattgtaatgtcaacttttttgaatggattgaaaggattgcaaaattgaat 24190247  T
Q  345 ttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatt 404  Q
     ||||| ||||| || ||  |||||||||||| ||||||||| || || |||||| ||||    
T  24190246 atgatattgcaagatcatacgagacgcattcaagatcatgaatccgatgtgagacacatt 24190187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 122 - 388
Target Start/End: Original strand, 9137516 - 9137780
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattg-ggataatttt-ataaccaaactaattatatttta 219  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||    
T  9137516 ttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgtggataattttcataacaaaacaaattatatttta 9137615  T
Q  220 cttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
     ||||||||| ||||    |   |||||| ||||||||||||||  ||||||  |||||| | |||||||| | |||  |||||||||  ||| |||||     
T  9137616 gttgaaaatgagcct----atgtattaatcttaatcttgtctttctaaggttcaaaaaaaattaattatatcaatattataatgtcaaaattcttgaatt 9137711  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac 388  Q
     |||  ||||||| ||||||| ||||| ||| || || || ||| ||||||||||||||||||||||||    
T  9137712 gattgaaaggatttcaaaattgaatttaatattgtaagatcatgcgagacgcattcatgatcatgaaac 9137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 146 - 318
Target Start/End: Complemental strand, 28374661 - 28374489
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatgggcct-ttagagaaat 244  Q
    |||||||||||||||| ||||||||||||| ||||||||| | |||||||||||||||||  |||||||||||| ||||||||| |  |  |||||||||    
T  28374661 aatattaaaaatattg-tgatatttattattcaagaaatttgaataattttataaccaaataaattatattttagttgaaaatgagtttactagagaaat 28374563  T
Q  245 taattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||| |||||||||| ||||||| |||  ||||||||||||||||| | ||| ||||| ||||||||| |||||    
T  28374562 taatcttaatcttgttttttaaatgttcaaaaaaattaaattatatcaatatagtaatttcaactttcttgaat 28374489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 146 - 288
Target Start/End: Complemental strand, 23232322 - 23232178
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaact-aattatattttacttgaaaatgggcct-ttagagaaa 243  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||| |||||||||||| | |||||||||||| ||||||||| ||||  |  |||||    
T  23232322 aatattaaaaatattggtgatatttattattgaagaaattaggataactttataaccaaaataaattatattttaattgaaaatgagcctactgaagaaa 23232223  T
Q  244 ttaattttaatcttgtcttttaaaggtttcaaaaaattaaattat 288  Q
    |||||||||||||| ||||| ||| ||| ||||||||||||||||    
T  23232222 ttaattttaatcttttctttcaaatgttccaaaaaattaaattat 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 32073246 - 32073413
Alignment:
Q  128 ctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttacttgaaa 226  Q
    |||||||||||  |||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||  ||| |||| |||||||||||| ||||||    
T  32073246 ctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgtgataatctttgcaacaaaacgaattatattttagttgaaa 32073345  T
Q  227 atgggc---ctttagagaaattaattttaatcttgtcttttaaaggtttcaaaa-aattaaattatat 290  Q
    |||| |     |||||||||||||| ||||||||||| || ||||||| ||||| || ||||||||||    
T  32073346 atggacacatattagagaaattaatcttaatcttgtcgttcaaaggttccaaaataaataaattatat 32073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 1981578 - 1981685
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  1981578 ttgttcctaataatgtgcttcattaatattaaaaatattgacgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 1981677  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  1981678 ttgaaaat 1981685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 45117448 - 45117555
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||| | |||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||     
T  45117448 ttgttcctaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcataacaaagcaaattatattttag 45117547  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  45117548 ttgaaaat 45117555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 4432194 - 4432086
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||| ||||||||||||||||   |||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  4432194 ttgttcctaataatgtacttcactaatattaaaaatattgacaatatttattatccaagaaattgggataattttcataacaaagcaaattttattttag 4432095  T
Q  221 ttgaaaatg 229  Q
    |||||||||    
T  4432094 ttgaaaatg 4432086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 3762679 - 3762786
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| ||||||||||||||    ||||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  3762679 ttgttcctaataatgtgtttcactaatattaaaaatatctacgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 3762778  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  3762779 ttgaaaat 3762786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 31597508 - 31597611
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| || | |||| ||||||| ||||    
T  31597508 tcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttga 31597607  T
Q  225 aaat 228  Q
    ||||    
T  31597608 aaat 31597611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 7973103 - 7972993
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||| ||||||||||| ||||| |||||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  7973103 ttgtttctaataatgtgcttcactaatattaaaaatatcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattttag 7973004  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  7973003 ttgaaaatggg 7972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 28509233 - 28509370
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||| ||| |||||| ||||| |||| ||||||||||||     
T  28509233 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattaggagaattttcataacaaaacaaattatattttag 28509332  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatctt 257  Q
    ||||||||||||||  |||| |||||||| ||||||||    
T  28509333 ttgaaaatgggcctactagaaaaattaatcttaatctt 28509370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 16729719 - 16729823
Alignment:
Q  129 taataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaa 227  Q
    |||||||||| ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||  |||| || | |||| ||||||| |||||||    
T  16729719 taataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcttaacaaagcaaattctattttagttgaaaa 16729818  T
Q  228 tgggc 232  Q
    |||||    
T  16729819 tgggc 16729823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 334 - 430
Target Start/End: Complemental strand, 23232175 - 23232079
Alignment:
Q  334 caaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgggtctattgttctc 430  Q
    ||||||| |||||||||||||| ||| |||||| || ||||||||||||| ||||| || ||||||||||||||||||||||||  ||||| |||||    
T  23232175 caaaattgaatttgataatgcagaatcatgtgaaacacattcatgatcataaaaccgatgtgagacgcatttaggatcatgtggccctattcttctc 23232079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 39906229 - 39906339
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataa-ttttataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||| |  | |||||||||||||| ||||||| |||| ||||||||| || | |||| |||||||     
T  39906229 ttgttcctaataatgtgcttcactaatattaaaaatatcgacgttatttattatccaataaattggaataatttttataacaaagcaaattctattttag 39906328  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  39906329 ttgaaaatggg 39906339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 40971424 - 40971534
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| |||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||| ||||||||| || || || | |||| |||||||     
T  40971424 ttgttcttaataatgtgtttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagcaaattctattttat 40971523  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  40971524 ttgaaaatggg 40971534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 6927668 - 6927561
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||||| ||||| |||| ||||||||||||     
T  6927668 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattatattttag 6927569  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  6927568 ttgaaaat 6927561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 7263754 - 7263680
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||| |||||||||| ||| | |||||||||||||| |  ||||||||||||||||||||||| |||||||||    
T  7263754 ttgttcttaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgagataatttt 7263680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 2879315 - 2879196
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttacttgaaaatgggcct-ttagagaaa 243  Q
    ||||||||||||||   ||||||||||||||||  ||||||||| ||| || ||||| |||| ||| |||||||| | ||||||||||||  |||| |||    
T  2879315 aatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataatattttagtagaaaatgggcctactagaaaaa 2879216  T
Q  244 ttaattttaatcttgtcttt 263  Q
    ||||| ||||||||| ||||    
T  2879215 ttaatcttaatcttgccttt 2879196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 24682597 - 24682704
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || |||||||| ||||||  |||||||||||||| |  ||||||||| ||| || ||||| |||| ||||||||||||     
T  24682597 ttgttcctaataatgtgtcttactaatattaagaatatttgtgatatttattatctagaaaattgggaaaatattcataacgaaacaaattatattttag 24682696  T
Q  221 ttgaaaat 228  Q
    | ||||||    
T  24682697 tcgaaaat 24682704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 2807811 - 2807702
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    |||||| ||||||||||  | || |||||||||||||||  ||||| ||||||||||  |||||| || ||| || | ||| |||| ||||||||||||     
T  2807811 ttgttcataataatgtgtcttactaatattaaaaatatttgtgataattattatccagaaaattgtgagaatcttcacaacgaaacaaattatattttag 2807712  T
Q  221 ttgaaaatgg 230  Q
    ||||||||||    
T  2807711 ttgaaaatgg 2807702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 416
Target Start/End: Original strand, 24682815 - 24682904
Alignment:
Q  328 ggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac-caatttgagacgcatttaggatcatgtg 416  Q
    ||||| || |||| ||||||||||||||| || |||  |||| |||||||||||||||||| | || ||| | |||||||||||||||||    
T  24682815 ggattgcagaattgaatttgataatgcaagatgatgcaagacacattcatgatcatgaaacacgatgtgacatgcatttaggatcatgtg 24682904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 417
Target Start/End: Complemental strand, 961243 - 961163
Alignment:
Q  337 aattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    |||| ||||||||||| ||| | |||||| ||||||||  ||||||||||||| || ||||| |||| ||||| |||||||    
T  961243 aattgaatttgataatacaagaatatgtgggacgcatttgtgatcatgaaaccgatgtgagatgcatgtaggaccatgtgg 961163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 11994758 - 11994691
Alignment:
Q  197 ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatcttgtcttt 263  Q
    ||||| |||| ||| ||||||||||||||||||||||| ||||| |||||||| ||||| ||| ||||    
T  11994758 ataacaaaacgaataatattttacttgaaaatgggcctattagaaaaattaatcttaatattgccttt 11994691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 532
Target Start/End: Complemental strand, 11648148 - 11648101
Alignment:
Q  487 acttttttggtgttattattcttaggtg--taaattgcagtctacttc 532  Q
    ||||||||||||||||||||||||||||   ||||| |||||||||||    
T  11648148 acttttttggtgttattattcttaggtgctaaaatttcagtctacttc 11648101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 4e-67; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 122 - 417
Target Start/End: Complemental strand, 19091305 - 19091009
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||  |||||||||||||||| |||||||||||||| |||||||| | |||||||| ||||| |||| ||||||||||||     
T  19091305 ttgttcctaataatgtgcctcaataatattaaaaatattggtgatatttattatctaagaaatttgtataattttcataacaaaacaaattatattttag 19091206  T
Q  221 ttgaaaatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||||||||  ||||||||||||| |||||||| ||||| |||||||||||||||| ||||||||| | ||| |||||||||| |||| |||||     
T  19091205 ttgaaaatgggcctactagagaaattaatcttaatcttatctttcaaaggtttcaaaaaat-aaattatatcaatatagtaatgtcaaatttcatgaatt 19091107  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
     |||  |||||||  |||||| ||||||||||||||| || ||| ||| |||||||| | |||||||||| ||  |||||||||||||||||||||||    
T  19091106 gattgaaaggattgaaaaattgaatttgataatgcaagatcatgcgagtcgcattcacgttcatgaaaccgatgcgagacgcatttaggatcatgtgg 19091009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 129 - 417
Target Start/End: Complemental strand, 13597989 - 13597700
Alignment:
Q  129 taataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaat 228  Q
    ||||||||||  || | |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||||    
T  13597989 taataatgtgcctcgctaatattaaaaatattggtcatatttattatccaagaaaatgggataattttataacaaaacaaattatattttagttgaaaat 13597890  T
Q  229 gggcctttagag-aaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataa 327  Q
    |  |||    || |||||||| ||||||||||| |||||||| | ||||||||| |||||||| ||||| ||||| ||| ||||  | |||  |||| ||    
T  13597889 gaacctactaagcaaattaatattaatcttgtcatttaaaggatccaaaaaatttaattatatgattatagtaatttcatcttttttaaattgattaaaa 13597790  T
Q  328 ggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    ||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||  || |||||||||||||||| |||||||    
T  13597789 ggattgcaaaattaaatttgataatgcaaaatcatgcgagacacattcatgatcatgaaactgatgtgagacgcatttaggaacatgtgg 13597700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 30386836 - 30387033
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    |||||||||||||||||  |||| |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| |    
T  30386836 ttgttcctaataatgtgtctcactaatattaaaaatatcggtgatatttattatccaagaaattaggataattttataacaaaacaaattatattttagt 30386935  T
Q  222 tgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    | ||||||||| |  |||| |||||||| |||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||| |||||    
T  30386936 taaaaatgggcttactagataaattaatcttaatcttgtcttttaaaggttccaaaaaattaaattatatcaatatagtaatgtcaactttcttgaat 30387033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 243 - 439
Target Start/End: Complemental strand, 31549162 - 31548966
Alignment:
Q  243 attaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaa 342  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||| ||||| ||||||||||||||  |||||  |||| || |||| ||||||| |    
T  31549162 attaattttaatcttgtttttcaaaggttccaaaaaattaaattatatcattatagtaatgtcaacttttttgaattgattaaaaagattgcaaaattga 31549063  T
Q  343 atttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgggtctattgttctcgggtgctaa 439  Q
    ||||||||||||| ||| ||| || || ||||| ||||||||||||| || | |||||||||||||||||||||   ||||||||||||||||||||    
T  31549062 atttgataatgcacaatcatgcgaaacacattcgtgatcatgaaaccgatgtaagacgcatttaggatcatgtgtccctattgttctcgggtgctaa 31548966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 125 - 375
Target Start/End: Original strand, 14904009 - 14904261
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    |||||||||||||| ||||| |||||||||||||||  |||||||||||||||||  |||| |||||||||| || || |||| |||||||||||| |||    
T  14904009 ttcctaataatgtgcttcactaatattaaaaatattcgtgatatttattatccaatgaattaggataattttcatgacaaaacaaattatattttagttg 14904108  T
Q  224 aaaatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaat 322  Q
    ||||| | |||  |||| ||||||||||||||||||||||| ||||||| ||||||| ||||||| || | ||| ||||||||||||||| |||||  ||    
T  14904109 aaaatagacctactagaaaaattaattttaatcttgtctttcaaaggttacaaaaaaataaattacatcaatatagtaatgtcaactttcttgaattgat 14904208  T
Q  323 tataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattc 375  Q
    |  ||||||| ||   || ||||||||||||||| || ||| ||||| |||||    
T  14904209 tgaaaggattgcatggttgaatttgataatgcaagatcatgcgagacacattc 14904261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 122 - 378
Target Start/End: Original strand, 25621421 - 25621678
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    ||||||||| | ||||| ||||| |||||||| ||||||  ||||| ||||||||||| |||||| || | ||| ||| | |||| |||||||||||| |    
T  25621421 ttgttcctacttatgtgcttcactaatattaacaatattagtgatacttattatccaataaattgagacattttcatagcaaaacaaattatattttagt 25621520  T
Q  222 tgaaaatgggccttta-gagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataa 320  Q
    ||||||||| |||  | || |||||||| |||||||||||||||||||||||||||||| ||||||||||||  || ||||||||||||||| |||||      
T  25621521 tgaaaatggacctacaagataaattaatcttaatcttgtcttttaaaggtttcaaaaaaataaattatataaaaatagtaatgtcaactttcttgaattg 25621620  T
Q  321 attataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatg 378  Q
    |||  ||| ||| || | || ||||||||||||||| || ||| ||||| ||||||||    
T  25621621 attgaaagaattgcatagttgaatttgataatgcaagatcatgcgagacacattcatg 25621678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 38566321 - 38566131
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||     
T  38566321 ttgttcctaataatgtgcgtcactaatattaaaaatattggtgatatttattatccaagaaattgggataattttcataacaaaacaaattatattttag 38566222  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||||| || ||||  || ||||||||| ||||||||||||||  |||||||||||||   ||||||||| | ||| |||||||||| |||| |||||    
T  38566221 ttgaaa-tgagcct--ag-gaaattaatcttaatcttgtctttctaaggtttcaaaaa---aaattatatcaatattgtaatgtcaaatttcttgaat 38566131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 122 - 417
Target Start/End: Original strand, 6882980 - 6883278
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaa--ttatatttt 218  Q
    |||||| ||||||||||  |||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||| |||  ||  |||||||||    
T  6882980 ttgttcttaataatgtgtctcacaaatattaaaaatattggtgatacttattatccaagaaattgagataattttcataacaaaaaaaaaattatatttt 6883079  T
Q  219 acttgaaaatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaa 317  Q
    | |||||||   ||||  | ||||||||||| |||||||||| ||||||||||| |||||||| |||||| ||   ||| ||||||||||||||| ||||    
T  6883080 agttgaaaacatgcctacttgagaaattaatcttaatcttgttttttaaaggttccaaaaaat-aaattacatcgatatagtaatgtcaactttcttgaa 6883178  T
Q  318 taaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    |  |||  |||||||  | |||| |||||||| ||| || || | ||||||| ||||| |||||||||||||||| ||| ||  ||||  ||||||||||    
T  6883179 ttgattgaaaggattctagaattgaatttgattatggaagatcacgtgagacacattcttgatcatgaaaccaatgtgaaacatatttgagatcatgtgg 6883278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 10022892 - 10023090
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| ||||| ||||||||||  ||||||||||||||||||||||| ||||||||| ||||| |||| || |||||||||     
T  10022892 ttgttcctaataatgtgcctcactaatataaaaaatattggggatatttattatccaagaaattgagataattttcataacaaaacaaaatatattttag 10022991  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||||| |||   |  ||||||||||||| |||||| |||||||||||||||||||||||  |||||||||   |||  |||||||||||||| |||||    
T  10022992 ttgaaagtggttttactagagaaattaatcttaatcatgtcttttaaaggtttcaaaaaaacaaattatatctatataataatgtcaactttcttgaat 10023090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 122 - 398
Target Start/End: Complemental strand, 11199407 - 11199129
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||  |||||||||||||| | ||||||||||||| |||||||||| ||| ||||| | | | |||| |||| |||||||     
T  11199407 ttgttcctaataatgtgcctcattaatattaaaaatatcgatgatatttattatgcaagaaattgagatgattttcaaagcaaaacaaattctattttag 11199308  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    |||||||||||| |  ||||||||||||| |||||||||| ||| |||| |||||||||| ||||| |||| | ||| |||||||||| |||| || ||     
T  11199307 ttgaaaatgggcatactagagaaattaatcttaatcttgtttttcaaagatttcaaaaaaataaatcatatcaatatagtaatgtcaattttcttgtatt 11199208  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgaga 398  Q
     |||  |||||||  | |||| ||||||||||| ||| || |||||| || || |||| || |||||||| || |||||    
T  11199207 gattgaaaggattgtagaattgaatttgataattcaagatcatgtgaaacacactcatcattatgaaaccgatgtgaga 11199129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 122 - 301
Target Start/End: Original strand, 9057382 - 9057561
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    ||||| |||||||||||  |||| || |||||| |||||| | |||||||||||||||||||||| ||||||||||| || |||| |||||||||||| |    
T  9057382 ttgtttctaataatgtgcctcactaaaattaaatatattggtcatatttattatccaagaaattgagataattttat-acaaaacaaattatattttaat 9057480  T
Q  222 tgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaa 301  Q
    |||| ||  |  |  ||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||| ||||||||||    
T  9057481 tgaatataagtttactagagaaattaatcttaatattgtctttcaaaggttccaaaaaattaaattatatcattatggtaa 9057561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 33054755 - 33054862
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||  ||||||||| ||||| |||| ||||||||||||     
T  33054755 ttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattatgataattttcataacaaaacaaattatattttag 33054854  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  33054855 ttgaaaat 33054862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 7880481 - 7880344
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||||| ||||| |||| ||||||||||||     
T  7880481 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattatattttag 7880382  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatctt 257  Q
    ||||||||||||||  ||||||||||||| ||||||||    
T  7880381 ttgaaaatgggcctactagagaaattaatcttaatctt 7880344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 122 - 388
Target Start/End: Complemental strand, 38423058 - 38422792
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||  ||||||||||| |||||||||||||||||||||||| || ||| || ||||| |||| ||| ||||||||     
T  38423058 ttgttcctaataatgtgcctcactaattataaaaatattgatgatatttattatccaagaaattgagagaatcttcataacaaaacaaatgatattttag 38422959  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||| || |  | ||||||| ||| | |||||| || |||| ||| | ||||||| |||||||||| | ||| ||| |||||| |||| || ||     
T  38422958 ttgaaaatgagcatacttgagaaataaatctcaatcttttc-tttagaggatccaaaaaa-taaattatatcaatatagtagtgtcaattttcttggatt 38422861  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac 388  Q
     |||  ||||||   | |||| ||||||||||||||| || ||||||||| ||||||||||| ||||||    
T  38422860 gattgaaaggatcgtagaattgaatttgataatgcaagatcatgtgagacacattcatgatcgtgaaac 38422792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 122 - 388
Target Start/End: Complemental strand, 41302569 - 41302303
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| ||||||||||  |||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||     
T  41302569 ttgttcgtaataatgtgcctcactaatattacaaatattgttgatatttattatccaaaaaattgggataattttcataacaaaacaaattatattttag 41302470  T
Q  221 tt-gaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtc-aactttcgtgaat 318  Q
    ||  |||||| ||||     |||||| || ||||||||||||||  ||| || ||||||| |||||||||| | ||| | |||||| || |||  |||||    
T  41302469 ttcaaaaatgagcct---acgaaattgatcttaatcttgtctttctaagattccaaaaaaataaattatatcaatatcgcaatgtcaaattttattgaat 41302373  T
Q  319 aaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac 388  Q
      |||  |||||||  |||||| ||||| ||| | ||| || ||  ||||| ||||||||||||||||||    
T  41302372 tgattgaaaggattgtaaaattgaatttaatattacaagatcatacgagacacattcatgatcatgaaac 41302303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 122 - 399
Target Start/End: Original strand, 24484458 - 24484734
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattt-tataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || |||||||||||||||  ||||||||||||||||||||||||  |||||||  ||||| |||| ||||||||||||     
T  24484458 ttgttcctaataatgtgcctaactaatattaaaaatatttgtgatatttattatccaagaaattgaaataatttacataacaaaacaaattatattttag 24484557  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaat---taaattatataattatggtaatgtcaactttcgtgaa 317  Q
    ||||||||| | |   |   |||||||| ||||||||||||||    ||||  |||||||   |||||||||| | ||| |||||||||| |||| ||||    
T  24484558 ttgaaaatgaggc---aacaaaattaatcttaatcttgtctttctgtggtt--aaaaaattactaaattatatcaatattgtaatgtcaaatttcttgaa 24484652  T
Q  318 taaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagac 399  Q
    |   ||  ||| ||| ||||||| ||||||||| ||||| || | | ||||||||||||| || |||||||| || ||||||    
T  24484653 ttggttgaaagcattgcaaaattgaatttgatattgcaagatcaagcgagacgcattcataataatgaaaccgatgtgagac 24484734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 41422997 - 41422923
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  41422997 ttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaagaaactgggataatttt 41422923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 41826086 - 41825976
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| |||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||| ||||||||| || || |||| |||| |||||||     
T  41826086 ttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaaacaaattctattttat 41825987  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  41825986 ttgaaaatggg 41825976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 258
Target Start/End: Original strand, 29303152 - 29303287
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatt-ttataaccaaactaattatattttacttg 223  Q
    ||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||| | | ||| |||| |||||||||||| |||    
T  29303152 ttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctaagaacaaaacaaattatattttagttg 29303251  T
Q  224 aaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    |||||||||||  ||||||||||||| |||||||||    
T  29303252 aaaatgggcctactagagaaattaatcttaatcttg 29303287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 2554038 - 2554148
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| |||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||| ||||||||| || || || | |||| |||||||     
T  2554038 ttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcattacaaagcaaattctattttat 2554137  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  2554138 ttgaaaatggg 2554148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 19678001 - 19678139
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatt-ttataaccaaactaattatattttac 220  Q
    ||||| |||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||| | ||||| |||| ||||||||||||     
T  19678001 ttgtttctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattatattttag 19678100  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    ||||||||||| ||  ||||||||||||| |||||||||    
T  19678101 ttgaaaatgggtctactagagaaattaatcttaatcttg 19678139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 22576106 - 22575996
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||| ||  |||| |||||||||||||| |  |||||||||||||||| |||||||||||||||| ||||| || | |||| |||||||     
T  22576106 ttgttcctaataatttgcctcactaatattaaaaatatcgacgatatttattatccaaaaaattgggataattttcataacaaagcaaattctattttag 22576007  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  22576006 ttgaaaatggg 22575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 27861943 - 27861833
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||| |||||||||||||| |   ||||||||||||||||||||||| |||||||| ||||| || | |||| |||||||     
T  27861943 ttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattggaataattttcataacaaagcaaattctattttag 27861844  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  27861843 ttgaaaatggg 27861833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 44314165 - 44314058
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||| ||||| ||||  |||||||||||||| |  ||||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  44314165 ttgttcctaattatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacaaagcaaattctattttag 44314066  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  44314065 ttgaaaat 44314058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 44322344 - 44322237
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||| ||||| ||||  |||||||||||||| |  ||||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  44322344 ttgttcctaattatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacaaagcaaattctattttag 44322245  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  44322244 ttgaaaat 44322237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 45277613 - 45277506
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||||| ||||| |||| ||||||||||||     
T  45277613 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattatattttag 45277514  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  45277513 ttgaaaat 45277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 19685779 - 19685849
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||| ||||| ||||||||| |||| |  |||||||||||||||||||||||||||||||||    
T  19685779 tcctaataatgtgcttcactaatattaaacatatcgacgatatttattatccaagaaattgggataatttt 19685849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 329 - 414
Target Start/End: Complemental strand, 43673191 - 43673105
Alignment:
Q  329 gattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac-caatttgagacgcatttaggatcatg 414  Q
    |||||||||||| ||||||||||||||| || |||| |||| ||||| |||||||||||| |||| |||||| |||||| |||||||    
T  43673191 gattacaaaattgaatttgataatgcaagatcatgtaagacacattcttgatcatgaaacacaatgtgagacacatttacgatcatg 43673105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 2565594 - 2565737
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    ||||||||||||||||   | || ||||||||||||||   ||||||||||||||||  ||||||||| ||| || ||||| |||| ||| ||||||||     
T  2565594 ttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataatattttag 2565693  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttt 263  Q
    | ||||||||||||  |||| |||||||| ||||| ||| ||||    
T  2565694 tagaaaatgggcctactagaaaaattaatcttaattttgccttt 2565737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 18781280 - 18781161
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttacttgaaaatgggcct-ttagagaaa 243  Q
    ||||||||||||||   ||||||||||||||||  ||||||||| ||| || ||||| |||| ||| |||||||| | ||||||||||||  |||| |||    
T  18781280 aatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataatattttagtagaaaatgggcctactagaaaaa 18781181  T
Q  244 ttaattttaatcttgtcttt 263  Q
    ||||| ||||||||| ||||    
T  18781180 ttaatcttaatcttgccttt 18781161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 33015315 - 33015208
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||| ||||||| ||| ||||  |||||||||||||| |  |||||||||||||||| |||| ||||||||||| ||||| || | |||| |||||||     
T  33015315 ttgtttctaataaagtgcttcattaatattaaaaatatcgacgatatttattatccaataaatggggataattttcataacaaagcaaattctattttag 33015216  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  33015215 ttgaaaat 33015208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 6221368 - 6221442
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||||||| ||||  ||||||||||||||    |||||||||||||||||||||  ||||||||||    
T  6221368 ttgttcctaataatgtgcttcattaatattaaaaatatctacgatatttattatccaagaaatgaggataatttt 6221442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 41422921 - 41422808
Alignment:
Q  172 ttatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggt 270  Q
    |||||||||||||||| |||||||| ||||| |||  |||||||||||| ||||||||| |||| |   |||||||||  ||||||||| |||  |||||    
T  41422921 ttatccaagaaattggaataattttcataacaaaataaattatattttagttgaaaatgagcctat---gaaattaatcataatcttgtatttctaaggt 41422825  T
Q  271 ttcaaaaaattaaatta 287  Q
    | ||||||| |||||||    
T  41422824 tccaaaaaaataaatta 41422808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 31549207 - 31549160
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatt 169  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||||    
T  31549207 ttgttcctaataatgtgcctcactaatattaaaaatattggtgatatt 31549160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 90410 - 90308
Alignment:
Q  163 tgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatcttgtc 260  Q
    |||||||| |||||||  ||||||| | ||| || ||||| |||| ||| |||||||| |||||||||||||| ||||| |||||||| ||||| ||| |    
T  90410 tgatatttgttatccagaaaattggaagaatcttcataacaaaacgaataatattttagttgaaaatgggcctattagaaaaattaatcttaatattgcc 90311  T
Q  261 ttt 263  Q
    |||    
T  90310 ttt 90308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 25416117 - 25416047
Alignment:
Q  188 gataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatct 256  Q
    ||||||||| ||||| || | |||||||||||| |||||||||| ||| |||||||||||||| |||||||    
T  25416117 gataattttgataacaaagcaaattatattttagttgaaaatggacctattagagaaattaatcttaatct 25416047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 532
Target Start/End: Complemental strand, 31548920 - 31548851
Alignment:
Q  465 tgagacgcgtttagtaatgtaaacttttttggtgttattattcttaggtg--taaattgcagtctacttc 532  Q
    |||||||  ||||||||||| ||||||||| |||||||||||||| ||||   ||||| |||||||||||    
T  31548920 tgagacgaatttagtaatgtcaactttttttgtgttattattctttggtggtaaaatttcagtctacttc 31548851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 25416159 - 25416114
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgata 167  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||    
T  25416159 ttgttcctaataatgtgtctcactaatattaaaaatattggtgata 25416114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 127 - 410
Target Start/End: Complemental strand, 41509310 - 41509027
Alignment:
Q  127 cctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaa 226  Q
    ||||||||||||  |||| |||||||||||||||| | |||||||||||||||||||||| || ||||||||||| |||| |||||||||||| ||||||    
T  41509310 cctaataatgtgtctcactaatattaaaaatattggtaatatttattatccaagaaattgagacaattttataactaaacaaattatattttagttgaaa 41509211  T
Q  227 atgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattat 325  Q
    ||  |||| |||||||||||||| |||||  | | ||| ||||||| |||||||||||||||||| || || ||||||||||||||| |||||  ||||     
T  41509210 atctgcctattagagaaattaatcttaatggtctttttcaaaggttccaaaaaattaaattatatcataatagtaatgtcaactttcttgaat-tattaa 41509112  T
Q  326 aaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggat 410  Q
    || |||||||||||| |||||||||||| ||||| ||| |||||   |||| |||||||||||| || |||||||||||||||||    
T  41509111 aatgattacaaaattgaatttgataatggaaaatcatgcgagacatgttcacgatcatgaaaccgatatgagacgcatttaggat 41509027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 10142125 - 10142323
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||||    
T  10142125 ttgtttctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattgggataattttcataacaaaacaaattatattttac 10142224  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    ||||||||||| ||  ||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| || | ||| ||||||||||||||| |||||    
T  10142225 ttgaaaatgggtctactagagaaattaatcttaatcttatcttttaaaggttgcaaaaaaataaattacatcaatatagtaatgtcaactttcttgaat 10142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 141 - 416
Target Start/End: Complemental strand, 10373474 - 10373196
Alignment:
Q  141 tcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatgggcctt-taga 239  Q
    |||| |||||||||||||||| | ||||| ||||| |||||||||| |||||||||||||  |||| |||||||||||| |||||||||| |||  ||||    
T  10373474 tcactaatattaaaaatattggtcatattcattatacaagaaattgagataattttataataaaacaaattatattttagttgaaaatggacctactaga 10373375  T
Q  240 gaaattaattttaatcttgtcttttaaaggtttcaaaaaa-ttaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaa 338  Q
     |||||||||||||||||||| ||||||| || ||||||| ||||||||||| |||||  |||||||||||||| |||||  |||  ||||||| |||||    
T  10373374 aaaattaattttaatcttgtcatttaaagcttccaaaaaaattaaattatatcattataataatgtcaactttcttgaattgatttaaaggattgcaaaa 10373275  T
Q  339 ttaaatttgataatgcaaaattatgtgagacgcattcatgatc-atgaaaccaatttgagacgcatttaggatcatgtg 416  Q
    || ||||| |||||||||||| ||| |||||| ||||||||||  ||||||  || ||||| ||||||||||| |||||    
T  10373274 ttgaatttaataatgcaaaatcatgcgagacgtattcatgatcgttgaaactgatatgagatgcatttaggataatgtg 10373196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 122 - 404
Target Start/End: Complemental strand, 1843280 - 1843000
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| ||||||||||||||||  |||||| |||||| ||||||||||||||||||| ||||| |||| |||||||||||      
T  1843280 ttgttcctaataatgtgcctcactaatattaaaaatattggagatattcattatctaagaaattgggataattttcataacaaaacaaattatatttttg 1843181  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataa 320  Q
    ||||||||| |||| |   ||||||||| ||||||||||||||  |||||| ||||||| |||||||||||| ||| ||||||||||||||| |||||      
T  1843180 ttgaaaatgagcctat---gaaattaatcttaatcttgtctttctaaggttccaaaaaaataaattatataaatattgtaatgtcaactttcttgaattg 1843084  T
Q  321 attataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatt 404  Q
    |||  || || | ||||||| ||| ||||| ||||| || ||| |||||||||||| |||||||||| | || |||||| ||||    
T  1843083 attgaaaagactgcaaaattgaatatgatattgcaagatcatgcgagacgcattcaagatcatgaaatcgatgtgagacacatt 1843000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 122 - 398
Target Start/End: Original strand, 52458998 - 52459276
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||| |||| |||| |||||||     
T  52458998 ttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggatatttttcataacaaaacaaattctattttag 52459097  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||||||||   |||||||||||  |||||||||||||| |||| || ||||||| |||||||||| | ||  ||||||||||||||| ||| |     
T  52459098 ttgaaaatgggcctaccagagaaattaaccttaatcttgtctttcaaagattccaaaaaaataaattatatcaatacagtaatgtcaactttcttgactt 52459197  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgaga 398  Q
     ||   ||||||| || |||| ||||||||||||||| || |||||| || |||| || || ||||||||||| |||||    
T  52459198 tatagaaaggattgcagaattgaatttgataatgcaagatcatgtgaaacacatttatcattatgaaaccaatgtgaga 52459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 122 - 398
Target Start/End: Original strand, 52460255 - 52460533
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||| |||| |||| |||||||     
T  52460255 ttgttcctaataatgtgtctcactaatattaaaaatatcgatgatatttattatccaagaaattgggatatttttcataacaaaacaaattctattttag 52460354  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||||||||   |||||||||||  |||||||||||||| |||| || ||||||| |||||||||| | ||  ||||||||||||||| ||| |     
T  52460355 ttgaaaatgggcctaccagagaaattaaccttaatcttgtctttcaaagattccaaaaaaataaattatatcaatacagtaatgtcaactttcttgactt 52460454  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgaga 398  Q
     ||   ||||||| || |||| ||||||||||||||| || |||||| || |||| || || ||||||||||| |||||    
T  52460455 tatagaaaggattgcagaattgaatttgataatgcaagatcatgtgaaacacatttatcattatgaaaccaatgtgaga 52460533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 126 - 404
Target Start/End: Complemental strand, 9921969 - 9921694
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    |||||||||||||  |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||  |||| |||||||||||| ||||    
T  9921969 tcctaataatgtgtctcactaatattaaaaatattgatgatatttattatccaagaaattgggataattttcgtaataaaacaaattatattttagttga 9921870  T
Q  225 aaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaatta 324  Q
    ||||| |||| |   ||||||||| ||||||||||||||  |||||||||||| | |||||||||| | ||| ||||||| ||||||  |||||  |||     
T  9921869 aaatgagcctat---gaaattaatcttaatcttgtctttctaaggtttcaaaataataaattatatcaatattgtaatgtaaacttt-ttgaattgattt 9921774  T
Q  325 taaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatt 404  Q
     ||||||| ||||||| ||| ||||| ||||| || ||| |||||  ||||| |||||||||||| || |||||||||||    
T  9921773 aaaggatttcaaaattgaatatgatattgcaagatcatgcgagacatattcaagatcatgaaaccgatgtgagacgcatt 9921694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 21319994 - 21320192
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaa-tattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  ||||  |||| ||||| || || |||||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||     
T  21319994 ttgttcctaataatgtgtctcactgatataaaaaaataatggtgatatttattaaccaataaattaggataattttataacaaaacaaattatattttag 21320093  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||||||||||| |  |||| |||||||| |||||||| | ||| ||||||| |||||||||||||||||  | ||| ||||||||||||||| |||||    
T  21320094 ttgaaaatgggcttactagataaattaatcttaatcttatttttcaaaggttccaaaaaattaaattataccaatatagtaatgtcaactttcttgaat 21320192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 122 - 301
Target Start/End: Complemental strand, 29283132 - 29282952
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    ||||| |||||||||||  |||| ||||||||| |||||| | |||||||||||||||||||||| |||||||||||||| |||  |||||||||||| |    
T  29283132 ttgtttctaataatgtgcctcactaatattaaatatattggtaatatttattatccaagaaattgagataattttataacaaaataaattatattttaat 29283033  T
Q  222 tgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaa 301  Q
    |||| ||  |  |  ||||||||||||| ||||| |||| ||| ||||||| |||||||||||||||||| ||||||||||    
T  29283032 tgaatataagtttactagagaaattaatcttaatattgtttttcaaaggttccaaaaaattaaattatatcattatggtaa 29282952  T

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Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 131 - 279
Target Start/End: Complemental strand, 42512344 - 42512194
Alignment:
Q  131 ataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatg 229  Q
    ||||| || ||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||| |||||||||    
T  42512344 ataatttgcttcactaatattaaaaatattggggatatttattatccaataaattgggataattttcataacaaaacaaattatattttagttgaaaatg 42512245  T
Q  230 ggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaa 279  Q
      |||  || |||||||||| |||||||||||||| |||||||||||||||    
T  42512244 aacctactaaagaaattaatcttaatcttgtctttcaaaggtttcaaaaaa 42512194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 122 - 263
Target Start/End: Original strand, 13957232 - 13957375
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| ||||| |||||||||  ||||||||||||||||| ||||||||||||||||  |||| |||| ||||||||||||     
T  13957232 ttgttcctaataatgtgcttcactaatatgaaaaatattagtgatatttattatccaataaattgggataattttcgtaacaaaacaaattatattttag 13957331  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttt 263  Q
    |||||||| | |||  |||||||| |||| ||||||||||||||    
T  13957332 ttgaaaatagacctactagagaaactaatcttaatcttgtcttt 13957375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 377
Target Start/End: Complemental strand, 24611430 - 24611216
Alignment:
Q  165 atatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcctt-tagagaaattaattttaatcttgtctt 262  Q
    |||||||||||||||||||||| ||||||||| ||||| |||| |||| ||||||| |||||||| |||||  |||| |||||||  |||||||||||||    
T  24611430 atatttattatccaagaaattgagataattttcataacaaaacaaattctattttagttgaaaattggcctactagaaaaattaaccttaatcttgtctt 24611331  T
Q  263 ttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattat 362  Q
    | |||| || ||||||| |||||| ||| | ||| ||| ||||||||||| |||||  |||  | ||||| || |||| |||||||||||| || || ||    
T  24611330 tcaaagattccaaaaaaataaattttattaatatagtattgtcaactttcttgaattgattgaagggattgcagaattgaatttgataatggaagatcat 24611231  T
Q  363 gtgagacgcattcat 377  Q
    |||| || |||||||    
T  24611230 gtgacacacattcat 24611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 10095144 - 10095037
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  10095144 ttgttcctaataatgtgcttcattaatattaaaaatattgacgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttaa 10095045  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  10095044 ttgaaaat 10095037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 39480373 - 39480263
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  39480373 ttgttcctaataatgtgcttcactaatattaaaaatatcgacgatattttttatccaagaaattgggataattttcataacaaagcaaattctattttag 39480274  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  39480273 ttgaaaatggg 39480263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 6261703 - 6261593
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||| |||| ||| |||||||||||||||| ||||| || | |||| |||||||     
T  6261703 ttgttcctaataatgtgcttcactaatattaaaaatattgatgatattttttattcaataaattgggataattttcataacaaagcaaattctattttag 6261604  T
Q  221 ttgaaaatggg 231  Q
    || ||||||||    
T  6261603 ttaaaaatggg 6261593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 7413865 - 7413791
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||||||| ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  7413865 ttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataatttt 7413791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 7459946 - 7459872
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||||||| ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  7459946 ttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataatttt 7459872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 3665584 - 3665451
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||| |||||| ||  |||| |||||||||| ||| | ||||||||||||| |||||||||| ||||||||| ||||| |||| |||| |||||||     
T  3665584 ttgttccaaataatatgtctcactaatattaaaa-tatcgatgatatttattattcaagaaattgagataattttcataacaaaacaaattctattttag 3665486  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaat 254  Q
    ||||||||| |||| |||||||||||||| |||||    
T  3665485 ttgaaaatgagcctattagagaaattaatcttaat 3665451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 28143577 - 28143439
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatt-ttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||| | ||||| |||| ||||||||||||     
T  28143577 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattatattttag 28143478  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    ||||||||||  ||  ||||||||||||| |||||||||    
T  28143477 ttgaaaatggatctactagagaaattaatcttaatcttg 28143439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 51337648 - 51337762
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaa 243  Q
    ||||||||||||||   ||||||||||||||||| ||||||||| |||||| ||||| |||| |||||||||||| ||||||||||||||    ||||||    
T  51337648 aatattaaaaatatatgtgatatttattatccaaaaaattgggagaattttcataacaaaacaaattatattttagttgaaaatgggcctaccggagaaa 51337747  T
Q  244 ttaattttaatcttg 258  Q
    ||||| |||||||||    
T  51337748 ttaatcttaatcttg 51337762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 36213718 - 36213824
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttatt-atccaagaaattgggataattttataaccaaactaattatattttacttg 223  Q
    |||||||||||||| ||||| |||||||||| |||||  ||||||| || ||| |||||||||||||||||| ||||| |||| |||| ||||||| |||    
T  36213718 ttcctaataatgtgcttcactaatattaaaa-tattgacgatatttttttatctaagaaattgggataatttaataacaaaacaaattctattttagttg 36213816  T
Q  224 aaaatggg 231  Q
    ||||||||    
T  36213817 aaaatggg 36213824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 9900159 - 9900071
Alignment:
Q  147 atattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct 234  Q
    ||||||||||||||| |||||||||  ||| ||||||||||||||||||| ||||  |||| |||||||||||| ||||||||| ||||    
T  9900159 atattaaaaatattggtgatatttaccatctaagaaattgggataattttcataatgaaacgaattatattttagttgaaaatgagcct 9900071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 23935896 - 23935828
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat 193  Q
    ||||||||||||||  |||| |||||||| ||||||| ||||||||||||||||||||||||| |||||    
T  23935896 ttcctaataatgtgcctcactaatattaataatattggtgatatttattatccaagaaattggaataat 23935828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 311
Target Start/End: Original strand, 25201039 - 25201183
Alignment:
Q  169 ttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggccttt-agagaaattaattttaatcttgtcttttaa 266  Q
    |||||||||||||||||||||||||||| ||||| |||| ||  |||||||| || ||||| | ||    | |||| ||||| |||||||||||||| ||    
T  25201039 ttattatccaagaaattgggataattttcataacaaaacaaaagatattttagttaaaaatagaccaaccatagaatttaatcttaatcttgtctttcaa 25201138  T
Q  267 aggtttcaaaaaattaaattatataattatggtaatgtcaacttt 311  Q
    | ||| ||||||| |||||||||| | ||| ||||||||||||||    
T  25201139 aagttccaaaaaaataaattatatcaatatagtaatgtcaacttt 25201183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 14192445 - 14192302
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    ||||||||||||||||   | || ||||||||||||||   ||||||||||||||||  ||||||||| ||| || ||||| |||| ||| ||||||||     
T  14192445 ttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaatcttcataacaaaacaaataatattttag 14192346  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttt 263  Q
    | ||||||||||||  |||| |||||||| ||||||||| ||||    
T  14192345 tagaaaatgggcctactagaaaaattaatcttaatcttgccttt 14192302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 342 - 417
Target Start/End: Original strand, 25201197 - 25201272
Alignment:
Q  342 aatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    ||||||||||||||  || |||||||||||||||||||||||||||   || ||||||| ||||||||||||||||    
T  25201197 aatttgataatgcatgatcatgtgagacgcattcatgatcatgaaaatgatgtgagacgtatttaggatcatgtgg 25201272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 274 - 356
Target Start/End: Complemental strand, 3665406 - 3665324
Alignment:
Q  274 aaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaa 356  Q
    |||||| |||||||||| | ||| ||||||||||||||| |||||  |||  ||||||| ||||||| |||||||||||||||    
T  3665406 aaaaaaataaattatatcaatatagtaatgtcaactttcttgaattgattgaaaggattgcaaaattgaatttgataatgcaa 3665324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 326 - 404
Target Start/End: Complemental strand, 9896460 - 9896383
Alignment:
Q  326 aaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatt 404  Q
    ||||||| ||||||| ||||||||| ||||| || ||| |||||||||||||| |||||||||| || |||||||||||    
T  9896460 aaggattgcaaaattgaatttgatattgcaagat-atgcgagacgcattcatgttcatgaaaccgatgtgagacgcatt 9896383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 6830723 - 6830670
Alignment:
Q  335 aaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac 388  Q
    |||||| ||||||||||||||| || |||||||||||||| | |||||||||||    
T  6830723 aaaattgaatttgataatgcaagatcatgtgagacgcatttaggatcatgaaac 6830670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 24612098 - 24612043
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatcc 177  Q
    ||||||||||||||||   |||| |||||||||||||| | |||||||||||||||    
T  24612098 ttgttcctaataatgtatctcactaatattaaaaatatcgatgatatttattatcc 24612043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 51890508 - 51890406
Alignment:
Q  168 tttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatcttgtctttta 265  Q
    |||||||||||| ||||||| || ||||| ||||| |||  |||||||||||| |||||||| | |||  || |||||||||| ||| |||||||||| |    
T  51890508 tttattatccaataaattggaatcattttcataacaaaataaattatattttagttgaaaatagacctactatagaaattaatcttattcttgtctttca 51890409  T
Q  266 aag 268  Q
    |||    
T  51890408 aag 51890406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 268
Target Start/End: Complemental strand, 51890782 - 51890680
Alignment:
Q  168 tttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatcttgtctttta 265  Q
    |||||||||||| ||||||| || ||||| ||||| |||  |||||||||||| |||||||| | |||  || |||||||||| ||| |||||||||| |    
T  51890782 tttattatccaataaattggaatcattttcataacaaaataaattatattttagttgaaaatagacctactatagaaattaatcttattcttgtctttca 51890683  T
Q  266 aag 268  Q
    |||    
T  51890682 aag 51890680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 126 - 388
Target Start/End: Complemental strand, 24185782 - 24185519
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaa 225  Q
    |||||||||||||  |||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  24185782 tcctaataatgtgtctcactattattaaaaatattggtgatatttattgtccaagaaattgggataattttataacaaaacaaattatattttagttgaa 24185683  T
Q  226 aatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaatta 324  Q
    |||||| ||  |||  |||||||| |||||||||||||| | | ||| |||||||||||||||||| | ||| ||||||| ||||| | ||||| | |||    
T  24185682 aatgggtctactagcaaaattaatcttaatcttgtctttcagaagttccaaaaaattaaattatatcaatatagtaatgtaaacttgcttgaattagtta 24185583  T
Q  325 taaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac 388  Q
     |||||||  |||||| ||||||||||| |||||| |||| | |||||||||||||||||||||    
T  24185582 aaaggattgtaaaattgaatttgataatacaaaatcatgtaaaacgcattcatgatcatgaaac 24185519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 146 - 417
Target Start/End: Complemental strand, 5509953 - 5509680
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcctt-tagagaaa 243  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||| ||||| |||  |||| |||||||  |||||||| ||||  |||| |||    
T  5509953 aatattaaaaatattggccatatttattatccaagaaattgggataattttcataacaaaataaattctattttagatgaaaatgtgcctactagataaa 5509854  T
Q  244 ttaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaa 343  Q
    ||||| |||||||||||||| |||| || |||||| ||||||||||| | ||| ||||||||||||||| |||||  |||| || |||| || |||| ||    
T  5509853 ttaatcttaatcttgtctttcaaagattccaaaaatttaaattatatcaatatagtaatgtcaactttcttgaattgattaaaaagattgcagaattgaa 5509754  T
Q  344 tttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||  || ||||||| ||||  ||||||||||    
T  5509753 tttgataatgcaagatcatgtgagacgcattcataatcatgaaactgatgtgagacgtatttgagatcatgtgg 5509680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 152 - 318
Target Start/End: Complemental strand, 47559642 - 47559476
Alignment:
Q  152 aaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattt 250  Q
    |||| ||||| |||||||||||||| || ||||||||||||||||||||| |||| |||||||||||| || |||||| || |  ||||||||||||| |    
T  47559642 aaaagtattggtgatatttattatcaaaaaaattgggataattttataacaaaacaaattatattttagttaaaaatgtgcttactagagaaattaatct 47559543  T
Q  251 taatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||| |||||||| ||| |||||||||||||||||||||| | ||| ||||||||||||||| |||||    
T  47559542 taatattgtctttcaaa-gtttcaaaaaattaaattatatcaatatagtaatgtcaactttcttgaat 47559476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 122 - 377
Target Start/End: Complemental strand, 5209802 - 5209545
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||| ||||| |  ||||| | ||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||     
T  5209802 ttgttcctgataattttcttcactactattaaacatattggtgatatttattatccaataaattgggataattttcataacaaaacaaattatattttag 5209703  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||   |||  || |||||||||| |||||||||| ||| ||||||||||||||| || |||| || | ||| ||||||||||||||| |||||     
T  5209702 ttgaaaatatacctactaaagaaattaatcttaatcttgtttttcaaaggtttcaaaaaaatatattacatcaatatagtaatgtcaactttcttgaatt 5209603  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcat 377  Q
     |||  ||||||| ||   |  ||||||||||||||| || ||| ||||| |||||||    
T  5209602 gattgaaaggattgcatggtcgaatttgataatgcaagatcatgcgagacacattcat 5209545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 122 - 378
Target Start/End: Original strand, 12027769 - 12028027
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||||| || || |||||  ||| ||||| ||||| |||| ||||| ||||||     
T  12027769 ttgttcctaataatgtgcttcactaatattaaaaatattggtgatatttattttcgaataaattttgatgattttcataacaaaacaaattagattttag 12027868  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    |||||||||| ||| |||||||||||||| ||||| |||||||| ||||| ||||||||| ||||||  ||   ||| |||||| || ||||| | |||     
T  12027869 ttgaaaatggacctattagagaaattaatcttaatattgtctttcaaagg-ttcaaaaaaataaattgcatcgatattgtaatgccagctttcttcaatt 12027967  T
Q  320 aatt-ataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatg 378  Q
     ||| | ||| ||| || | |||||||||||||||||| |||||| ||||| ||||||||    
T  12027968 gattgaaaagaattgcatagttaaatttgataatgcaagattatgcgagacacattcatg 12028027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 47397649 - 47397450
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||| | ||||||||||||||||||||||| |||||||||| ||||   ||| |||||||| |||     
T  47397649 ttgttcctaataatgtgcatcactaatattaaaaatatcgatgatatttattatccaagaaattcggataattttcataatggaac-aattatatcttag 47397551  T
Q  221 ttgaaaatgggcct-ttaga-gaaattaattttaatcttgtcttttaaaggtttc-aaaaaattaaattatataattatggtaatgtcaactttcgtgaa 317  Q
    |||||||||| ||| | |||  |||||||| |||||||||||||| ||||||| | |||||| |||||||||| | ||| ||||||||||||||| ||||    
T  47397550 ttgaaaatggacctatgagataaaattaatcttaatcttgtctttcaaaggttccaaaaaaaataaattatatcaatatagtaatgtcaactttcttgaa 47397451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 49229459 - 49229351
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||||     
T  49229459 ttgttcttaataatgtgtttcactaatattaaaaatattgatgatatttattatccaagaaattgggataattttcataacaaaataaattatattttag 49229360  T
Q  221 ttgaaaatg 229  Q
    |||||||||    
T  49229359 ttgaaaatg 49229351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 36296675 - 36296788
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||     
T  36296675 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattatattttag 36296774  T
Q  221 ttgaaaatgggcct 234  Q
    ||||||||||||||    
T  36296775 ttgaaaatgggcct 36296788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 25095147 - 25095255
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  25095147 ttgttcctaataatgtgcttcactaatattaaaaatattgacggtatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 25095246  T
Q  221 ttgaaaatg 229  Q
    |||||||||    
T  25095247 ttgaaaatg 25095255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 129 - 290
Target Start/End: Original strand, 9023202 - 9023365
Alignment:
Q  129 taataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaa 227  Q
    ||||||||||  |||| |||||||||||||| | |||||||||||||||||  |||||||||| |||| ||||| |||| |||| ||||||| |||||||    
T  9023202 taataatgtgcctcactaatattaaaaatatcgatgatatttattatccaaataattgggatagttttaataacaaaacaaattctattttagttgaaaa 9023301  T
Q  228 tgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatat 290  Q
    || | ||  ||||||||||||    ||||||||||||||||| || ||||||| ||||||||||    
T  9023302 tgagtctactagagaaattaaccaaaatcttgtcttttaaagattccaaaaaaataaattatat 9023365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 23664230 - 23664120
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||| |||   |||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  23664230 ttgttcctaataatgtgtttcactaatattaaaaatgttgaccatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 23664131  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  23664130 ttgaaaatggg 23664120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 42722210 - 42722323
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || |||||||||||||    ||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||     
T  42722210 ttgttcctaataatgtgtcttactaatattaaaaatacatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattatattttag 42722309  T
Q  221 ttgaaaatgggcct 234  Q
    ||||||||||||||    
T  42722310 ttgaaaatgggcct 42722323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 17967446 - 17967339
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||  |||| || | |||| |||||||     
T  17967446 ttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctattttag 17967347  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  17967346 ttgaaaat 17967339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 48596474 - 48596367
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||  |||||||||||||| |  |||||||||||||||||||||| |||||||||| ||||| || | |||| |||||||     
T  48596474 ttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattaggataattttcataacaaagcaaattctattttag 48596375  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  48596374 ttgaaaat 48596367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 28945941 - 28945803
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatt-ttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||| | ||||| |||| ||||||||||||     
T  28945941 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattatattttag 28945842  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    ||||||||||  ||  ||||||||||||| |||||||||    
T  28945841 ttgaaaatggatctactagagaaattaatcttaatcttg 28945803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 5049441 - 5049544
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||  ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||  |||| || | |||| ||||||| ||||    
T  5049441 tcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttga 5049540  T
Q  225 aaat 228  Q
    ||||    
T  5049541 aaat 5049544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 21906365 - 21906468
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||| ||||| |||||||||||||| |   ||||||||||||||||||||||||||||||||  |||| || | |||| ||||||| ||||    
T  21906365 tcctaataatgtgcttcactaatattaaaaatatcgacaatatttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttga 21906464  T
Q  225 aaat 228  Q
    ||||    
T  21906465 aaat 21906468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 22070485 - 22070592
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||| |  |||||||||||||||| |||||| ||||||||| |||||  | | |||| |||||||     
T  22070485 ttgttcctaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaaaaaattgagataattttcataacagagcaaattctattttag 22070584  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  22070585 ttgaaaat 22070592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 34307564 - 34307461
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||| ||||| |||||||||||||| |  |||||||||||| ||||||||||||||||||||  |||| || | |||| ||||||| ||||    
T  34307564 tcctaataatgtgcttcactaatattaaaaatatcgacgatatttattattcaagaaattgggataattttcgtaacaaagcaaattctattttagttga 34307465  T
Q  225 aaat 228  Q
    ||||    
T  34307464 aaat 34307461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 48999389 - 48999459
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||| ||||| ||||||||| |||| |  |||||||||||||||||||||||||||||||||    
T  48999389 tcctaataatgtgcttcactaatattaaacatatcgacgatatttattatccaagaaattgggataatttt 48999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 48646143 - 48646232
Alignment:
Q  129 taataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattt 217  Q
    ||||||||||  ||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||| |||| ||||||||||    
T  48646143 taataatgtgcctcactgatattaaaaatattggtgatatttattatccaataaattgggataattttcaaaacaaaacaaattatattt 48646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 27430908 - 27430805
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||  ||||| |||| ||||||||| |  |||||||||||||||||||||||||||||||||  |||| || | |||| ||||||| ||||    
T  27430908 tcctaataatgtacttcactaatactaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttga 27430809  T
Q  225 aaat 228  Q
    ||||    
T  27430808 aaat 27430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 12784090 - 12783996
Alignment:
Q  123 tgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattt 217  Q
    ||||| |||| |||||  |||| |||||||||||||||| |  |||||||||||||| |||||| |||||||||||| | |||| ||||||||||    
T  12784090 tgttcttaattatgtgcctcactaatattaaaaatattggtagtatttattatccaaaaaattgcgataattttatagcaaaacaaattatattt 12783996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 44310437 - 44310511
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||||||||||||||  |||| |||||| ||||||||| ||||||| |||||||| ||||||| |||||||||    
T  44310437 ttgttcctaataatgtgcctcactaatattgaaaatattggtgatattaattatccatgaaattgagataatttt 44310511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 26221657 - 26221766
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    ||||||||||||||||   | || ||||||||||||||   ||||||||||||||||| ||||||||| ||| || ||||| |||| ||| ||||||||     
T  26221657 ttgttcctaataatgtatcttactaatattaaaaatatatgtgatatttattatccaaaaaattgggagaatcttcataacaaaacaaataatattttag 26221756  T
Q  221 ttgaaaatgg 230  Q
    | ||||||||    
T  26221757 tagaaaatgg 26221766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 298 - 398
Target Start/End: Original strand, 44310547 - 44310647
Alignment:
Q  298 gtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgag 397  Q
    ||||||||||||||| |||||  |||  ||| ||| || |||| ||||||||||||||| || |||||| || ||||||| || || ||||| || ||||    
T  44310547 gtaatgtcaactttcttgaattgattgaaagaattgcataattgaatttgataatgcaagatcatgtgaaacacattcatcattataaaaccgatgtgag 44310646  T
Q  398 a 398  Q
    |    
T  44310647 a 44310647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 2e-60; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 126 - 387
Target Start/End: Original strand, 40934035 - 40934297
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaa 225  Q
    |||||||||||||  |||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||| |||| |||||| ||||| |||||    
T  40934035 tcctaataatgtgtctcactaatattaaaaatattgatcatatttattatccaagaaatttggataattttataacaaaacaaattatgttttagttgaa 40934134  T
Q  226 aatgggcctt-tagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaatta 324  Q
    | ||||  |  | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||| | |||  ||||    
T  40934135 attgggtatactggagaaattaatcttaatcttgtctttcaaaggttacaaaaaatgaaattatatcattatagtaatgtcaactttcttcaattgatta 40934234  T
Q  325 taaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaa 387  Q
     ||  ||| |||||||  ||||||||||||||||||||| |||| ||||| ||||||||||||    
T  40934235 aaaaaatttcaaaattggatttgataatgcaaaattatgcgagatgcatttatgatcatgaaa 40934297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 122 - 417
Target Start/End: Original strand, 21863581 - 21863877
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||   ||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||| ||||| || | ||||||||||||     
T  21863581 ttgttcctaataatgtgccccactaatattaaaaatattggtgatatttattattcaagaaattgagataattttcataacaaagcaaattatattttag 21863680  T
Q  221 ttgaaaatgggcc-tttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    |||||||||| ||   ||||||||||||| |||||| |||| || |||| || ||||||| |||||||||| | ||  ||||||||||||||  |||||     
T  21863681 ttgaaaatggaccaagtagagaaattaatcttaatcatgtccttcaaagattccaaaaaa-taaattatattaataaagtaatgtcaacttttttgaatt 21863779  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
     |||  || |||| ||||||| ||||||||||| ||| || ||| ||||| ||||| ||| ||||||| | || |||||||||||| | |||||||||    
T  21863780 gattgaaatgattgcaaaattgaatttgataatccaagatcatgcgagacacattcttgaccatgaaatcgatgtgagacgcatttggtatcatgtgg 21863877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 125 - 286
Target Start/End: Complemental strand, 39039010 - 39038847
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    ||||| ||||||||  |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||  |||| |||| |||||||||||| ||     
T  39039010 ttcctcataatgtgcctcactaatattaaaaatattggtgatatttattgtccaagaaattgggataattttcgtaacaaaacaaattatattttagtta 39038911  T
Q  224 aaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaatt 286  Q
    |||||||||||  |||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  39038910 aaaatgggcctactagataaattaatcttaatcttgtctgttaaaggtttcaaaaaattaaatt 39038847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 146 - 410
Target Start/End: Original strand, 9420461 - 9420727
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcctt-tagagaaa 243  Q
    |||||| ||||||||| ||| ||||||||||||||||||| |||| ||||| ||||| |||  |||| ||||||| ||||||||| |  |  ||||||||    
T  9420461 aatatttaaaatattgttgaaatttattatccaagaaattaggattattttcataacaaaataaattttattttagttgaaaatgagtttcctagagaaa 9420560  T
Q  244 ttaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaa 343  Q
     |||| ||||||||||||||||||| || ||||||| |||||||||| | | | ||||||||||||||| |||||  |||| || |||| || |||| ||    
T  9420561 ataatcttaatcttgtcttttaaagattccaaaaaaataaattatatcaatgtagtaatgtcaactttcttgaattgattaaaaagattgcagaattgaa 9420660  T
Q  344 tttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggat 410  Q
    ||| ||||||||| || ||| |||| |||||||||||||||||||| || ||||  |||||| ||||    
T  9420661 tttaataatgcaagatcatgcgagaggcattcatgatcatgaaaccgatatgaggtgcatttgggat 9420727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 148 - 318
Target Start/End: Complemental strand, 28460338 - 28460165
Alignment:
Q  148 tattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatgggcct-ttagagaaatta 246  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||| |||| |||| ||| |||||||| |||||||||||| |  |||| ||||||    
T  28460338 tattaaaaatattggtgatatttattatccaagaagtttggataattttttaacaaaacaaatgatattttagttgaaaatgggcttactagaaaaatta 28460239  T
Q  247 attttaatcttgtcttttaaaggtttc--aaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    |||||||| |||||||||||||||| |  ||||||||||||||||| | ||| | ||||||||||||| |||||    
T  28460238 attttaatattgtcttttaaaggttccaaaaaaaattaaattatatcaatatagcaatgtcaactttcttgaat 28460165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 122 - 413
Target Start/End: Original strand, 5770859 - 5771141
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||||||||||||||||||||||||||    |||||  |||  |||||||||||| |    
T  5770859 ttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgggata----tataa--aaataaattatattttagt 5770952  T
Q  222 tgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaa 321  Q
    |||||||| ||||     ||||||||| ||||||||||||||  ||| || ||||| | |||||||||| | ||| |||||||||| |||| |||||  |    
T  5770953 tgaaaatgagcct---acgaaattaatattaatcttgtctttctaagtttccaaaagagtaaattatatcaatattgtaatgtcaaatttcttgaattga 5771049  T
Q  322 ttataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcat 413  Q
    ||  ||||||| ||||| | |||||  || ||||| || ||| || | |||||||||||||||||||  || ||||| ||||| | ||||||    
T  5771050 ttgaaaggattgcaaaaatgaatttagtattgcaagatcatgcgacatgcattcatgatcatgaaactgatgtgagatgcattcatgatcat 5771141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 122 - 289
Target Start/End: Complemental strand, 43179546 - 43179378
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttact 221  Q
    ||||||||||||||||   |||| |||||| |||||| || ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |    
T  43179546 ttgttcctaataatgtacctcactaatattgaaaatactggtgatatttattatccaagaaattgggataattttataacaaaacaaattatattttagt 43179447  T
Q  222 tgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattata 289  Q
    | |||||| | || ||| | |||||||| |||||||| ||||| |||||||   |||||||||||||||    
T  43179446 taaaaatgagtctattaaaaaaattaatcttaatcttatctttcaaaggttctcaaaaattaaattata 43179378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 146 - 417
Target Start/End: Complemental strand, 45446165 - 45445899
Alignment:
Q  146 aatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttacttgaaaatgggcctt-tagagaaa 243  Q
    |||||||||||||||| | ||||| || |||||||||||||  ||||| |||||||  |||| |||||||||||| |||||||| |||||  ||||||||    
T  45446165 aatattaaaaatattgatcatatt-atcatccaagaaattgaaataatatttataagaaaacaaattatattttagttgaaaattggcctactagagaaa 45446067  T
Q  244 ttaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaa 343  Q
    |||||||||||||| ||||| ||||||| |||||||  ||||||||| | ||| ||||||| | |||||  |||| ||||| || ||||  | |||| ||    
T  45446066 ttaattttaatcttttctttcaaaggttccaaaaaa-aaaattatatcaatatagtaatgttagctttctcgaattaattaaaaagattgtagaattgaa 45445968  T
Q  344 tttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    ||||||||||||| || ||| ||||||      ||||||||||||| || ||||||| ||||  ||||||||||    
T  45445967 tttgataatgcaagatcatgcgagacg-----gtgatcatgaaaccgatgtgagacgtatttgagatcatgtgg 45445899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 123 - 287
Target Start/End: Complemental strand, 8604718 - 8604552
Alignment:
Q  123 tgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggata-attttataaccaaactaattatattttact 221  Q
    |||||||||||||||| ||||| |||||||| ||||||| | ||| ||||||||||| ||| ||||| |  ||||||||| |||  |||||||||||| |    
T  8604718 tgttcctaataatgtgcttcactaatattaataatattggtcataattattatccaataaactgggaaattttttataactaaataaattatattttatt 8604619  T
Q  222 tgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaatta 287  Q
    ||||||| | |||  |||| || ||||| |||||||||||||| ||||||| |||||||||||||||    
T  8604618 tgaaaattgacctactagataagttaatcttaatcttgtctttcaaaggttccaaaaaattaaatta 8604552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 24442049 - 24441941
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| |  || |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||      
T  24442049 ttgttcctaataatgtgctcaactaatattaaaaatattggtgatatttattatccaataaattgggataattttaataacaaaacaaattatatttttg 24441950  T
Q  221 ttgaaaatg 229  Q
    |||||||||    
T  24441949 ttgaaaatg 24441941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 48636675 - 48636788
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || |||||||||||||    ||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||     
T  48636675 ttgttcctaataatgtgtcttactaatattaaaaatacatgtgatatttattatccaaaaaattgggagaattttcataaccaaacaaattatattttag 48636774  T
Q  221 ttgaaaatgggcct 234  Q
    ||||||||||||||    
T  48636775 ttgaaaatgggcct 48636788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 29637007 - 29636904
Alignment:
Q  128 ctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaa 226  Q
    |||||||||||  | || |||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||| |||| |||||||||||| ||||||    
T  29637007 ctaataatgtgtctgactaatattaaaaatattgatgatatttattatccaataaattgggataattttcaaaacaaaacaaattatattttagttgaaa 29636908  T
Q  227 atgg 230  Q
    ||||    
T  29636907 atgg 29636904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 297
Target Start/End: Complemental strand, 35118348 - 35118193
Alignment:
Q  141 tcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaattatattttacttgaaaatgggcctt-taga 239  Q
    |||| ||||||||| |||||| | ||||||||||||||| |||||| ||  |||||||||| |||| |||||||||||| ||||||||  ||||  || |    
T  35118348 tcactaatattaaatatattggtcatatttattatccaataaattgaga--attttataacaaaacaaattatattttagttgaaaataagcctactaaa 35118251  T
Q  240 gaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatg 297  Q
     |||||||| | ||| |||||||| ||||||| |||||||||||| ||||| ||||||    
T  35118250 aaaattaatctgaatgttgtctttcaaaggttccaaaaaattaaactatatcattatg 35118193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 41822254 - 41822148
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    ||||||||||||||  |||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||  ||||||||| || ||     
T  41822254 ttcctaataatgtgcctcactaatattaaaaatattgatgatatttattatccaagaaatttggataattttcataacaaaataaattatattatagtta 41822155  T
Q  224 aaaatgg 230  Q
    |||||||    
T  41822154 aaaatgg 41822148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 133 - 378
Target Start/End: Complemental strand, 8114024 - 8113779
Alignment:
Q  133 aatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatggg 231  Q
    |||||| ||||  |||||||||||||||| ||||||||||||||||| || ||||| ||||||| |||||  ||| |||||||||||| ||||||||       
T  8114024 aatgtgtttcattaatattaaaaatattggtgatatttattatccaataagttggggtaattttcataac--aacaaattatattttagttgaaaataaa 8113927  T
Q  232 cct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataagga 330  Q
    |||  || ||| |||||| ||||| || ||||| |||||||  |||||| ||||||| || | ||| |||||||||| ||||  ||||  |||  |||||    
T  8113926 cctactacagatattaatcttaatattttctttcaaaggttctaaaaaaataaattacattaatatagtaatgtcaattttctcgaattgattgaaagga 8113827  T
Q  331 ttacaaaattaaatttgataatgcaaaattatgtgagacgcattcatg 378  Q
    || || | || |||||||||||| || || ||| ||||| ||||||||    
T  8113826 ttgcatagttgaatttgataatggaagatcatgcgagacacattcatg 8113779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 6189525 - 6189387
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatt-ttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||| |  |||| |||| ||||||||||||     
T  6189525 ttgttcctaataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattctcttaacaaaacaaattatattttag 6189426  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    |||||||||||| |  ||||||||||||| |||||||||    
T  6189425 ttgaaaatgggcatactagagaaattaatcttaatcttg 6189387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 20394900 - 20394796
Alignment:
Q  129 taataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaa 227  Q
    |||||||||| ||||| |||||||||||||| |  |||||||||||| |||||||||||||||||||| ||||| || | |||| ||||||| || ||||    
T  20394900 taataatgtgcttcactaatattaaaaatatcgacgatatttattattcaagaaattgggataattttcataacaaagcaaattctattttagttcaaaa 20394801  T
Q  228 tgggc 232  Q
    |||||    
T  20394800 tgggc 20394796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 8069580 - 8069691
Alignment:
Q  149 attaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaatta 246  Q
    |||||||||||   ||||||||||||||||  ||||||||| |||| | ||||| |||| |||||||||||| ||||||||||||||  |||||||||||    
T  8069580 attaaaaatatatgtgatatttattatccagaaaattgggagaattctcataacaaaacaaattatattttagttgaaaatgggcctactagagaaatta 8069679  T
Q  247 attttaatcttg 258  Q
    || |||||||||    
T  8069680 atcttaatcttg 8069691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 8389421 - 8389314
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||  |||||||||||||| |  |||||||||||||||||||||  |||||||||| ||||| || | |||| |||||||     
T  8389421 ttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataattttcataacaaagcaaattctattttag 8389322  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  8389321 ttgaaaat 8389314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 31072642 - 31072539
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttga 224  Q
    ||||||||||||  ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||  |||| || | |||| ||||||| ||||    
T  31072642 tcctaataatgtacttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcgtaacaaagcaaattctattttagttga 31072543  T
Q  225 aaat 228  Q
    ||||    
T  31072542 aaat 31072539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 4539848 - 4539922
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||| |||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||| |||||||||    
T  4539848 ttgttcataataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataatttt 4539922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 268
Target Start/End: Original strand, 44733619 - 44733764
Alignment:
Q  123 tgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttact 221  Q
    |||| |||||||||||  |||| |||||| ||||||| | ||||||||||||||||||||| || ||||||||| ||||| |||  |||| || |||| |    
T  44733619 tgtttctaataatgtgtgtcactaatattgaaaatatcgatgatatttattatccaagaaa-tgagataattttcataacaaaataaattctaatttagt 44733717  T
Q  222 tgaaaatgggcctttagagaaattaattttaatcttgtcttttaaag 268  Q
    |||||||| ||||    ||||||||| ||||||||||||||| ||||    
T  44733718 tgaaaatgagcctactaagaaattaactttaatcttgtctttcaaag 44733764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 48238433 - 48238570
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || || |||||||||||   ||||||||||||||||  ||||||| | |||||| ||||| |||| ||||||||||||     
T  48238433 ttgttcctaataatgtgtcttactaa-attaaaaatatatgtgatatttattatccagaaaattggaagaattttcataacaaaacaaattatattttag 48238531  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    ||||||||||||||  ||||||||| ||| |||||||||    
T  48238532 ttgaaaatgggcctactagagaaataaatcttaatcttg 48238570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 13754097 - 13754171
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||| |||||||||| ||||| ||||||||||||||    ||||||||||||||||||||||| |||||||||    
T  13754097 ttgttcttaataatgtgcttcactaatattaaaaatatcaacgatatttattatccaagaaattgagataatttt 13754171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 18667350 - 18667424
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||| |||||||||| ||||| |||||||||||||| |   |||||||||||||||||||||| |||||||||    
T  18667350 ttgttcttaataatgtgcttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataatttt 18667424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 35478099 - 35478025
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||| |||||||||| ||| | |||||||||||||| |  ||||||||||||||||||||||| |||||||||    
T  35478099 ttgttcttaataatgtgcttcgctaatattaaaaatatcgacgatatttattatccaagaaattgagataatttt 35478025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 23381092 - 23381160
Alignment:
Q  128 ctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||||| ||  |||| |||||||||||||| | |||||||||| |||||| ||||||||||||||||    
T  23381092 ctaataatatgtctcactaatattaaaaatatcggtgatatttatcatccaaaaaattgggataatttt 23381160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 135639 - 135746
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttacttg 223  Q
    |||||||||| |||  | || |||||||||||||||  | ||||||||||||||  ||||||||| ||| || | ||| |||| |||||||||||| |||    
T  135639 ttcctaataaggtgtcttactaatattaaaaatatttgtaatatttattatccagaaaattgggagaatcttcacaactaaacaaattatattttaattg 135738  T
Q  224 aaaatggg 231  Q
    ||||||||    
T  135739 aaaatggg 135746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 287
Target Start/End: Complemental strand, 3124354 - 3124209
Alignment:
Q  147 atattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatatt---ttacttgaaaatgggcct-ttagaga 241  Q
    ||||||||||||| | |||||||||||||||| ||||||| |||| |||| ||||| |||| |||| ||||   ||| | ||||||| || |  |||| |    
T  3124354 atattaaaaatatcgatgatatttattatccaggaaattgagatatttttcataacaaaacaaattttattttattattggaaaatgagcatactagata 3124255  T
Q  242 aattaattttaatcttgtcttttaaaggtttcaaaaaattaaatta 287  Q
    ||||||| |||||||||| ||| |||| || ||||||| |||||||    
T  3124254 aattaatattaatcttgtttttcaaagattccaaaaaaataaatta 3124209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 39038829 - 39038750
Alignment:
Q  337 aattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtg 416  Q
    |||| ||||||||||||||| || ||| |||||  |||| ||||||||||||  || |||||| ||||||||||||||||    
T  39038829 aattgaatttgataatgcaagatcatgcgagacatattcttgatcatgaaactgatgtgagacacatttaggatcatgtg 39038750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 1623572 - 1623621
Alignment:
Q  147 atattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||| |   ||||||||||||||||||||||||||||||||    
T  1623572 atattaaaaatatcgacaatatttattatccaagaaattgggataatttt 1623621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 19312021 - 19311919
Alignment:
Q  163 tgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcct-ttagagaaattaattttaatcttgtc 260  Q
    |||||||| |||||||  ||||||| | ||| || ||||| |||| ||| |||||||| |||||||||||||| ||||| |||||||| ||||| ||| |    
T  19312021 tgatatttgttatccagaaaattggaagaatcttcataacaaaacgaataatattttagttgaaaatgggcctattagaaaaattaatcttaatattgcc 19311922  T
Q  261 ttt 263  Q
    |||    
T  19311921 ttt 19311919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 15991930 - 15991966
Alignment:
Q  151 taaaaatattgctgatatttattatccaagaaattgg 187  Q
    ||||||||||  |||||||||||||||||||||||||    
T  15991930 taaaaatatttatgatatttattatccaagaaattgg 15991966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 36628441 - 36628505
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattg 186  Q
    ||||| ||||| |||||  |||| |||  ||||||||||| | ||||||||||||||||||||||    
T  36628441 ttgttactaatcatgtgtctcactaattataaaaatattggtaatatttattatccaagaaattg 36628505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 122 - 417
Target Start/End: Complemental strand, 18721 - 18424
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattggga-taattttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||||| ||||||||||||||||| |||||| || || ||||||||| |||| |||| |||||||     
T  18721 ttgttcctaataatgtgcctcactaatattaaaaatattggtgatatttattatccaataaattgagattatttttataacaaaacaaattttattttag 18622  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||| ||||  |||| || ||||| ||||||| |||||| |||| || ||||||| |||||||||| | ||| |||||||||| |||| |||||     
T  18621 ttgaaaatgagcctactagaaaacttaatcttaatctagtctttcaaagattccaaaaaaataaattatatcaatattgtaatgtcaaatttcttgaatt 18522  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
     |||  | ||||| || | || |||||||||||| || || ||| |||||  |||||| || |||||| | || |||||||||||| |||||||||||    
T  18521 gattcaatggattgcatatttgaatttgataatgaaagatcatgcgagacatattcataattatgaaatcgatgtgagacgcatttgggatcatgtgg 18424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 125 - 378
Target Start/End: Complemental strand, 11680976 - 11680721
Alignment:
Q  125 ttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttg 223  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| |||| |||||||||||| |||    
T  11680976 ttcctaataatgtgcttcactaatattaaaaatattggtgatatttattatccaataaattggaataattttcataacaaaacaaattatattttagttg 11680877  T
Q  224 aaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaat 322  Q
    ||||||  |||  |||| |||||||| |||||||| ||||| |||||||||||| || ||||| | || | |||  |||||||||||||| |||||  ||    
T  11680876 aaaatgaacctactagaaaaattaatcttaatcttatctttcaaaggtttcaaacaaataaatcacatcaatataataatgtcaactttcttgaattgat 11680777  T
Q  323 tataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatg 378  Q
    |  ||||||| || | || ||||||||||||||| || |||  |||| ||||||||    
T  11680776 tgaaaggattgcatagttgaatttgataatgcaagatcatgctagacacattcatg 11680721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 19107918 - 19108112
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattttataaccaaactaat-tatattttac 220  Q
    |||||||| |||||||   |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||  || ||||  ||| |||||||||     
T  19107918 ttgttcctgataatgttcctcactaatattaaaaatattggtgatatttattatccaaaaaattgggataattttcaaaacaaaaaaatatatattttag 19108017  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    ||||||||| || |     ||||||||| |||||||| |||||  |||||||||||||| |||||||| | | ||| ||||||||||||||| |||||    
T  19108018 ttgaaaatgagcat---ccgaaattaatcttaatcttctctttgtaaggtttcaaaaaaataaattatttcaatattgtaatgtcaactttcttgaat 19108112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 149 - 356
Target Start/End: Complemental strand, 3229292 - 3229087
Alignment:
Q  149 attaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcctttagagaaattaa 247  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||| ||||| |||| |||||| |  || ||||||||  ||||     ||||||||    
T  3229292 attaaaaatattggtgatatttattatccaagaaatgtggataattttcataacaaaacaaattatttcctagttgaaaattagcct---acgaaattaa 3229196  T
Q  248 ttttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttg 347  Q
    | |||||| |||||||  |||||| ||||||| |||||||||| | ||| |||||||||| |||| ||||| ||||  ||||||| ||||||| ||||||    
T  3229195 tcttaatcgtgtctttctaaggttccaaaaaaataaattatatcaatattgtaatgtcaaatttcttgaattaattgaaaggattgcaaaattgaatttg 3229096  T
Q  348 ataatgcaa 356  Q
    ||| |||||    
T  3229095 atattgcaa 3229087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 31129727 - 31129920
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| ||||||||||  |||| | |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||| ||||| ||||||     
T  31129727 ttgttcttaataatgtgcctcactagtattaaaaatattgatgatatttattatcaaagaaattgggataattttcataacaaaac-aattacattttag 31129825  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaat 318  Q
    ||||||||| | || |   ||||||||| |||||||| | |||   ||||||||||||| |||||||||| | ||| || ||| |||||||| |||||    
T  31129826 ttgaaaatgagtctat---gaaattaatcttaatcttatatttctcaggtttcaaaaaaataaattatattaatattgtgatgacaactttcttgaat 31129920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 1422937 - 1423044
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||| |||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| || | |||| |||||||     
T  1422937 ttgttcctgataacgtgtttcactaatattaaaaatattgatgatatttattatccaagaaattgggataattttcataacaaagcaaattctattttag 1423036  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  1423037 ttgaaaat 1423044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 122 - 356
Target Start/End: Original strand, 26817340 - 26817575
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||| |||||||||||  | || ||||||| |||||| | ||||||||||||||||||||||||||||| |||| |||||  ||| |||| |||||||     
T  26817340 ttgtttctaataatgtgcctaactaatattacaaatatcgatgatatttattatccaagaaattgggatatttttcataac--aacaaattctattttag 26817437  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaa-attatataattatggtaatgtcaactttcgtgaat 318  Q
    |||||||| ||| |  ||||||||||||| |||||||||||||| |||| || |||||||  ||  || ||| | ||| ||||||| ||||||| |||||    
T  26817438 ttgaaaataggcatactagagaaattaatcttaatcttgtctttcaaagattccaaaaaacaaattttttatcaatatagtaatgttaactttcttgaat 26817537  T
Q  319 aaattataaggattacaaaattaaatttgataatgcaa 356  Q
      |||  || |||| || |||| |||||||||||||||    
T  26817538 tgattgaaatgattgcagaattgaatttgataatgcaa 26817575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 33516748 - 33516611
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| ||||||||||  | || ||||||||||||||   ||||||||||||||||  ||||||||| |||||| ||||| |||| ||||||||||||     
T  33516748 ttgttcataataatgtgtcttactaatattaaaaatatatgtgatatttattatccagaaaattgggagaattttcataacaaaacaaattatattttag 33516649  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatctt 257  Q
    ||||||||||||||  ||||||||||||| ||||||||    
T  33516648 ttgaaaatgggcctactagagaaattaatcttaatctt 33516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 18675335 - 18675445
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||| ||| ||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||| ||||| || | |||| |||||||     
T  18675335 ttgttcctaataacgtgtttcactaatattaaaaatattgtcgatatttattatccaagaaattaggataattttcataacaaagcaaattctattttag 18675434  T
Q  221 ttgaaaatggg 231  Q
    || ||||||||    
T  18675435 ttaaaaatggg 18675445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 1131765 - 1131868
Alignment:
Q  131 ataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatg 229  Q
    |||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||  || | |||| ||||||| |||||||||    
T  1131765 ataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgggataattttcataataaagcaaattctattttagttgaaaatg 1131864  T
Q  230 ggcc 233  Q
    ||||    
T  1131865 ggcc 1131868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 241 - 413
Target Start/End: Original strand, 22524816 - 22524988
Alignment:
Q  241 aaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaatt 340  Q
    |||| ||| ||||||||||||||| |||||| ||||||| |||||||||| ||||| || ||| |||||||| |||||  |||  || ||||  ||||||    
T  22524816 aaatgaatcttaatcttgtctttttaaggttccaaaaaaataaattatatcattattgtgatgacaactttcttgaattgattgaaaagattgtaaaatt 22524915  T
Q  341 aaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcat 413  Q
     | ||  | | |||||| |||| |||||| ||||||||||||||||||| || |||||| |||| | ||||||    
T  22524916 gacttcaacattgcaaatttatatgagacacattcatgatcatgaaaccgatgtgagacacattcatgatcat 22524988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 15060148 - 15060255
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||| ||||||||||  ||||  ||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||| |||| |||| |||||||     
T  15060148 ttgttcataataatgtgtctcactgatattaaaaatatcgatgatatttattatccaagaaattgagataattttcataacaaaacaaattctattttag 15060247  T
Q  221 ttgaaaat 228  Q
    || |||||    
T  15060248 ttaaaaat 15060255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 22012238 - 22012131
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||| ||||| ||||  |||||||||||||| |  ||||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  22012238 ttgttcctaattatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaattgagataattttcataacaaagcaaattctattttag 22012139  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  22012138 ttgaaaat 22012131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 34043526 - 34043633
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||  |||||||||||||| |  ||||||||||||||||||||| ||||||||||| ||||| || | |||| |||||||     
T  34043526 ttgttcctaataatgttcttcattaatattaaaaatatcgacgatatttattatccaagaaatggggataattttcataacaaagcaaattctattttag 34043625  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  34043626 ttgaaaat 34043633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 20990419 - 20990493
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||||| |||||||||| ||||| |||||||||||||| |  ||||||||||||||||||||||| |||||||||    
T  20990419 ttgttcttaataatgtgcttcactaatattaaaaatatcgacgatatttattatccaagaaattgagataatttt 20990493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 1603352 - 1603426
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||||||| ||||  |||||||||||||| |  |||||||||||||||||||||  ||||||||||    
T  1603352 ttgttcctaataatgtgcttcattaatattaaaaatatcgacgatatttattatccaagaaatgaggataatttt 1603426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 4065711 - 4065601
Alignment:
Q  120 ccttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatatttt 218  Q
    |||||||| ||||||| || ||||| |||  ||||||||||| ||||||||||||||||||||||||| | | | || ||||| |||| ||| |||||||    
T  4065711 ccttgttcataataatttgcttcactaattataaaaatattggtgatatttattatccaagaaattggaagactcttcataacaaaacaaatgatatttt 4065612  T
Q  219 acttgaaaatg 229  Q
    | |||||||||    
T  4065611 agttgaaaatg 4065601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 21442661 - 21442726
Alignment:
Q  164 gatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaat 228  Q
    ||||||||||||||||||||||||||||||||| ||||| || | |||| ||||||| ||||||||    
T  21442661 gatatttattatccaagaaattgggataattttcataacaaagcaaattctattttagttgaaaat 21442726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 26212966 - 26212911
Alignment:
Q  141 tcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    |||| |||||||||||||| | ||||||||||||||||||||||  ||||||||||    
T  26212966 tcactaatattaaaaatatcgatgatatttattatccaagaaatcaggataatttt 26212911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 15603824 - 15603786
Alignment:
Q  476 tagtaatgtaaacttttttggtgttattattcttaggtg 514  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15603824 tagtaatgtaaagttttttggtgttattattcttaggtg 15603786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 551
Target Start/End: Original strand, 1831209 - 1831273
Alignment:
Q  489 ttttttggtgttattattcttaggtgt--aaattgcagtctacttcacagatattattgttctct 551  Q
    ||||||||||||||||||||||| ||   ||||| ||||||||||| ||||| ||||||||||||    
T  1831209 ttttttggtgttattattcttagatgctaaaatttcagtctacttcgcagatgttattgttctct 1831273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 4090916 - 4090808
Alignment:
Q  120 ccttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatatttt 218  Q
    |||| ||| ||||||||||  |||| |||  ||||||||||| | |||||||||||||||||||||| || ||| || ||||| |||| ||  |||||||    
T  4090916 ccttattcttaataatgtgtctcacaaattataaaaatattgataatatttattatccaagaaattgcgagaatcttcataacaaaacaaacgatatttt 4090817  T
Q  219 acttgaaaa 227  Q
    | |||||||    
T  4090816 agttgaaaa 4090808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 12269381 - 12269487
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || |||||||||||||||  |||||||||||||| || ||||| ||| ||| || | ||| |||| ||||||||||||     
T  12269381 ttgttcctaataatgtgtcttactaatattaaaaatatt-ttgatatttattatctaaaaaattaggagaatcttcacaacaaaacaaattatattttag 12269479  T
Q  221 ttgaaaat 228  Q
    || |||||    
T  12269480 ttaaaaat 12269487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 22524749 - 22524782
Alignment:
Q  163 tgatatttattatccaagaaattgggataatttt 196  Q
    |||||||||||||||||||||||||||| |||||    
T  22524749 tgatatttattatccaagaaattgggatgatttt 22524782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 515
Target Start/End: Complemental strand, 11680508 - 11680480
Alignment:
Q  487 acttttttggtgttattattcttaggtgt 515  Q
    |||||||||||||||||||||||||||||    
T  11680508 acttttttggtgttattattcttaggtgt 11680480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 122 - 417
Target Start/End: Original strand, 1295 - 1592
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||||  ||||||||||||||||| |||||| ||| ||||| ||||| |||| |||| |||||||     
T  1295 ttgttcctaataatgtgcctcactaatattaaaaatatttgtgatatttattatccaataaattgagattattttcataacaaaacaaattctattttag 1394  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    ||||||||| ||||  |||| || ||||| ||||||| |||||| |||| || ||||| | |||||||||| | ||| |||||||||| |||| |||||     
T  1395 ttgaaaatgagcctactagaaaacttaatcttaatctagtctttcaaagattccaaaataataaattatatcaatattgtaatgtcaaatttcttgaatt 1494  T
Q  320 aattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
     |||  | ||||| || | || | ||| ||||||||| || ||| |||||| |||||| || || ||||| || |||||||||||| |||||||||||    
T  1495 gattcaatggattgcatatttgactttaataatgcaagatcatgcgagacgtattcataattataaaaccgatgtgagacgcatttgggatcatgtgg 1592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 122 - 356
Target Start/End: Original strand, 25100 - 25336
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataat-tttataaccaaactaattatattttac 220  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||||||||||||||||||||| |||||| || || || || | ||||| ||||||     
T  25100 ttgttcctaataatgtgtctcactaatattaaaaatattggtgatatttattatccaagaaattgagataatattcatgacaaaccaaattaaattttag 25199  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaata 319  Q
    |||||||| ||| | |||||||| |||||  ||||||||||||| ||||||| || |||| |||||||||| | |||  |||||||||||||| ||||      
T  25200 ttgaaaattggcatattagagaagttaatcctaatcttgtctttcaaaggttccataaaaataaattatatcaatatattaatgtcaactttcttgaaat 25299  T
Q  320 aattataaggattacaaaattaaatttgataatgcaa 356  Q
     |||  ||||||| || |||| |||||||||| ||||    
T  25300 gattgaaaggattgcataattgaatttgataaagcaa 25336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 122 - 284
Target Start/End: Complemental strand, 2551 - 2387
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattt-tataaccaaactaattatattttac 220  Q
    ||||||||||||||||| ||||| |||||||||||||||  ||||||||||||| ||| |||||| ||||||||  ||||| |||| ||||||||||||     
T  2551 ttgttcctaataatgtgtttcactaatattaaaaatattagtgatatttattattcaataaattgagataatttgcataacaaaacaaattatattttag 2452  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaa 284  Q
    |||||||||  ||| ||| |||||||||| |||||||||||||| |||| || ||||||| ||||    
T  2451 ttgaaaatgaacctattatagaaattaatcttaatcttgtctttcaaagtttccaaaaaaataaa 2387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 122 - 402
Target Start/End: Original strand, 40798 - 41076
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataattt-tataaccaaactaattatattttac 220  Q
    |||||||||||||||||  | || |||||||||||||||  ||||||||||||||||||||||||  |||||||  ||||| |||| ||||||||||||     
T  40798 ttgttcctaataatgtgcctaactaatattaaaaatatttgtgatatttattatccaagaaattgaaataatttacataacaaaacaaattatattttag 40897  T
Q  221 ttgaaaatgggcctttagagaaattaattttaatcttgtcttttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataa 320  Q
    ||||||||| | ||  |   |||||||| ||||||||||||||  | ||||  |||| | |||||||||| | ||| |||||||||| |||| |||||      
T  40898 ttgaaaatgaggctaca---aaattaatcttaatcttgtctttctatggttaaaaaatactaaattatatcaatattgtaatgtcaaatttcttgaattg 40994  T
Q  321 attataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaaccaatttgagacgca 402  Q
     ||  ||| ||| ||||||| ||||||||| ||||| || | |  ||||||||| || || |||||||| || |||||||||    
T  40995 gttgaaagcattgcaaaattgaatttgatattgcaagatcaagcaagacgcatttataataatgaaaccgatgtgagacgca 41076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 169 - 417
Target Start/End: Complemental strand, 98425 - 98176
Alignment:
Q  169 ttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggcctt-tagagaaattaattttaatcttgtcttttaa 266  Q
    ||||||| |||||||||| ||| ||||| ||||  |||  |||| ||||||| ||||||||| || |  ||||||||||||| |||||||||||||| ||    
T  98425 ttattattcaagaaattgagattattttcataataaaataaattctattttagttgaaaatgagcatgctagagaaattaatcttaatcttgtctttcaa 98326  T
Q  267 aggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattatgtga 366  Q
    || || ||||||| |||||||||| | |||  ||||||||| |||| |||||  ||   ||||||| |||| || ||||||||||||||| || ||| ||    
T  98325 agattccaaaaaaataaattatatcaatatattaatgtcaaatttcttgaattgatcgaaaggattgcaaatttgaatttgataatgcaagatcatgcga 98226  T
Q  367 gacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    | | ||||||| || |||||||| || |||||||||||| |||||||||||    
T  98225 g-cacattcataattatgaaaccgatgtgagacgcatttgggatcatgtgg 98176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 119471 - 119420
Alignment:
Q  120 ccttgttcctaataatgtgattcacgaatattaaaaatattgctgatattta 171  Q
    |||||||||||||||||||  || | |||||||||||||||| |||||||||    
T  119471 ccttgttcctaataatgtgcctcgctaatattaaaaatattggtgatattta 119420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 169 - 417
Target Start/End: Original strand, 873 - 1127
Alignment:
Q  169 ttattatccaagaaattgggataatttt-ataaccaaactaattatattttacttgaaaatgggccttta-gagaaattaattttaatctt----gtctt 262  Q
    ||||||||| |||||||| ||| ||||| ||||| |||| |||| ||||||| ||||||||| ||||    ||||||||||| ||||| |     |||||    
T  873 ttattatcctagaaattgagattattttcataacaaaacaaattctattttagttgaaaatgagcctacctgagaaattaatcttaatatatatagtctt 972  T
Q  263 ttaaaggtttcaaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattat 362  Q
    | |||| || ||||||| |||||||||| | ||| |||||||||| |||| |||||  |||  || |||| |||| || ||||||||||| ||| || ||    
T  973 tcaaagattccaaaaaaataaattatatcaatatagtaatgtcaaatttcttgaattgattgaaatgattgcaaatttgaatttgataatacaagatcat 1072  T
Q  363 gtgagacgcattcatgatcatgaaaccaatttgagacgcatttaggatcatgtgg 417  Q
    | ||||||||||||| || |||||||| || || ||||||||| |||||||||||    
T  1073 gcgagacgcattcataattatgaaaccgatgtgggacgcatttgggatcatgtgg 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 3425 - 3287
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    |||||||||||||| ||  | || ||||||||||||||   |||||||||||||| || ||||||||| |||||| ||||| |||| ||||||||||||     
T  3425 ttgttcctaataatatgtcttactaatattaaaaatatatgtgatatttattatctaaaaaattgggagaattttcataacaaaacaaattatattttag 3326  T
Q  221 ttgaaaatgggcct-ttagagaaattaattttaatcttg 258  Q
    |||||||| |||||  ||||||||||||  |||||||||    
T  3325 ttgaaaattggcctactagagaaattaaacttaatcttg 3287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 6e-20; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 87755 - 87645
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||| |||||||||||||| |   |||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  87755 ttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacgaagcaaattctattttag 87656  T
Q  221 ttgaaaatggg 231  Q
    |||||||||||    
T  87655 ttgaaaatggg 87645  T

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Target: scaffold0016; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 88229 - 88122
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||| |||||||||||||| |   |||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  88229 ttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacaaagcaaattctattttag 88130  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  88129 ttgaaaat 88122  T

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Target: scaffold0016; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 88705 - 88598
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||| |||||||||||||| |   |||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  88705 ttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacaaagcaaattctattttag 88606  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  88605 ttgaaaat 88598  T

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Target: scaffold0016; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 89181 - 89074
Alignment:
Q  122 ttgttcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt-ataaccaaactaattatattttac 220  Q
    ||||||||||||||||  ||||| |||||||||||||| |   |||||||||||||||||||||| ||||||||| ||||| || | |||| |||||||     
T  89181 ttgttcctaataatgtacttcactaatattaaaaatatcgacaatatttattatccaagaaattgagataattttcataacaaagcaaattctattttag 89082  T
Q  221 ttgaaaat 228  Q
    ||||||||    
T  89081 ttgaaaat 89074  T

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Target: scaffold0093 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 50914 - 50984
Alignment:
Q  126 tcctaataatgtgattcacgaatattaaaaatattgctgatatttattatccaagaaattgggataatttt 196  Q
    ||||||||||||  ||||   ||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  50914 tcctaataatgtacttcattgatattaaaaatatcgacgatatttattatccaagaaattgggataatttt 50984  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 21402 - 21299
Alignment:
Q  274 aaaaaattaaattatataattatggtaatgtcaactttcgtgaataaattataaggattacaaaattaaatttgataatgcaaaattatgtgagacgcat 373  Q
    ||||||||||||||||| | |||  |||||| ||||||| |||||  |||  ||| |||  | |||| ||||||||||||||| || ||| |||||||||    
T  21402 aaaaaattaaattatatcaatatattaatgtgaactttcttgaattgattgaaagaattgaataattgaatttgataatgcaagatcatgcgagacgcat 21303  T
Q  374 tcat 377  Q
    ||||    
T  21302 tcat 21299  T

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Target: scaffold0552 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 10224 - 10171
Alignment:
Q  335 aaaattaaatttgataatgcaaaattatgtgagacgcattcatgatcatgaaac 388  Q
    |||||| ||||||||||||||| || |||||||||||||| | |||||| ||||    
T  10224 aaaattgaatttgataatgcaagatcatgtgagacgcatttaggatcataaaac 10171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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