View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20001_low_9 (Length: 496)

Name: NF20001_low_9
Description: NF20001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20001_low_9
NF20001_low_9
[»] chr8 (42 HSPs)
chr8 (9-239)||(16066357-16066584)
chr8 (30-239)||(22104555-22104768)
chr8 (9-234)||(4582433-4582663)
chr8 (9-164)||(22104402-22104561)
chr8 (9-164)||(19392939-19393098)
chr8 (66-235)||(4237492-4237661)
chr8 (66-235)||(4242231-4242400)
chr8 (95-213)||(19391268-19391386)
chr8 (66-233)||(31449018-31449185)
chr8 (56-227)||(37772468-37772640)
chr8 (295-362)||(4582306-4582373)
chr8 (295-366)||(22104825-22104896)
chr8 (20-100)||(19392875-19392955)
chr8 (42-187)||(25733382-25733529)
chr8 (372-462)||(37589302-37589392)
chr8 (366-486)||(19961323-19961443)
chr8 (42-187)||(23915239-23915386)
chr8 (101-227)||(42972911-42973036)
chr8 (66-167)||(43301905-43302006)
chr8 (366-486)||(23827463-23827583)
chr8 (299-358)||(16066238-16066297)
chr8 (80-187)||(25367186-25367293)
chr8 (66-164)||(34817928-34818026)
chr8 (10-89)||(23915229-23915308)
chr8 (66-187)||(8330564-8330683)
chr8 (18-76)||(21411768-21411826)
chr8 (18-76)||(21806260-21806318)
chr8 (30-76)||(43301976-43302022)
chr8 (158-235)||(8330537-8330615)
chr8 (101-187)||(14036271-14036357)
chr8 (18-76)||(18861870-18861928)
chr8 (18-71)||(21384489-21384542)
chr8 (18-71)||(21387909-21387962)
chr8 (18-62)||(21827253-21827297)
chr8 (295-331)||(25361759-25361795)
chr8 (30-89)||(8330640-8330699)
chr8 (30-89)||(34817983-34818042)
chr8 (366-424)||(22730171-22730229)
chr8 (30-63)||(4237644-4237677)
chr8 (30-63)||(4242383-4242416)
chr8 (340-368)||(12843946-12843974)
chr8 (339-367)||(25642948-25642976)
[»] scaffold0004 (2 HSPs)
scaffold0004 (9-239)||(199917-200147)
scaffold0004 (295-366)||(200204-200275)
[»] chr2 (46 HSPs)
chr2 (9-239)||(377427-377657)
chr2 (9-235)||(24292601-24292829)
chr2 (20-234)||(34070287-34070503)
chr2 (9-235)||(7559482-7559708)
chr2 (30-229)||(42249086-42249287)
chr2 (12-235)||(25375628-25375849)
chr2 (27-234)||(24285924-24286135)
chr2 (18-164)||(24286104-24286252)
chr2 (9-164)||(6856924-6857081)
chr2 (30-173)||(6857075-6857220)
chr2 (9-164)||(34070146-34070303)
chr2 (30-165)||(26903012-26903149)
chr2 (42-235)||(17452738-17452933)
chr2 (80-227)||(28855917-28856064)
chr2 (80-234)||(10159868-10160025)
chr2 (295-362)||(24285798-24285865)
chr2 (295-362)||(24292475-24292542)
chr2 (111-225)||(17327849-17327963)
chr2 (101-219)||(22845192-22845310)
chr2 (66-164)||(26897391-26897491)
chr2 (366-486)||(5013852-5013972)
chr2 (80-164)||(26902932-26903018)
chr2 (295-362)||(42249351-42249418)
chr2 (42-185)||(9785895-9786040)
chr2 (66-164)||(42248991-42249092)
chr2 (301-362)||(34070507-34070567)
chr2 (295-358)||(26903230-26903293)
chr2 (366-486)||(1512468-1512588)
chr2 (80-187)||(6297093-6297200)
chr2 (295-362)||(6857319-6857386)
chr2 (133-234)||(30658985-30659086)
chr2 (10-89)||(9785885-9785964)
chr2 (106-227)||(13290744-13290863)
chr2 (101-215)||(30635587-30635701)
chr2 (9-59)||(22845138-22845188)
chr2 (30-76)||(26897485-26897531)
chr2 (9-63)||(42248954-42249008)
chr2 (81-173)||(30629604-30629698)
chr2 (18-76)||(1284259-1284317)
chr2 (158-235)||(6297066-6297144)
chr2 (9-63)||(26897354-26897408)
chr2 (18-76)||(30344216-30344274)
chr2 (144-210)||(3238614-3238680)
chr2 (30-76)||(30658929-30658975)
chr2 (178-235)||(30629727-30629784)
chr2 (178-227)||(35602519-35602567)
[»] scaffold0357 (4 HSPs)
scaffold0357 (9-239)||(3482-3714)
scaffold0357 (295-366)||(12943-13014)
scaffold0357 (295-366)||(3354-3425)
scaffold0357 (174-235)||(13074-13135)
[»] chr7 (82 HSPs)
chr7 (30-239)||(19097135-19097346)
chr7 (9-239)||(8954399-8954634)
chr7 (9-235)||(36477697-36477926)
chr7 (27-235)||(853034-853246)
chr7 (27-235)||(1211038-1211250)
chr7 (9-227)||(11017228-11017440)
chr7 (30-235)||(838497-838688)
chr7 (30-235)||(1203677-1203868)
chr7 (30-235)||(845653-845844)
chr7 (9-164)||(19096982-19097141)
chr7 (66-235)||(47102303-47102472)
chr7 (42-164)||(845838-845964)
chr7 (42-164)||(853215-853341)
chr7 (42-164)||(1211219-1211345)
chr7 (81-224)||(9650122-9650265)
chr7 (42-187)||(16580976-16581123)
chr7 (80-219)||(19641087-19641227)
chr7 (295-366)||(8954272-8954343)
chr7 (48-219)||(9008889-9009061)
chr7 (25-187)||(14927836-14927999)
chr7 (42-183)||(14259744-14259887)
chr7 (295-366)||(845522-845593)
chr7 (295-366)||(852903-852974)
chr7 (295-366)||(1210907-1210978)
chr7 (295-367)||(19097402-19097474)
chr7 (25-187)||(15351302-15351465)
chr7 (9-98)||(29727070-29727158)
chr7 (295-358)||(838374-838437)
chr7 (295-358)||(1203554-1203617)
chr7 (66-164)||(838682-838784)
chr7 (66-164)||(1203862-1203964)
chr7 (67-183)||(16459585-16459701)
chr7 (81-213)||(47552057-47552191)
chr7 (44-183)||(32302587-32302728)
chr7 (66-187)||(27257011-27257132)
chr7 (366-486)||(45115524-45115644)
chr7 (9-89)||(15351380-15351460)
chr7 (366-486)||(26168538-26168658)
chr7 (81-235)||(10488467-10488622)
chr7 (66-147)||(8076825-8076906)
chr7 (18-76)||(18426672-18426730)
chr7 (18-76)||(20485332-20485390)
chr7 (18-76)||(20488693-20488751)
chr7 (158-235)||(27257081-27257159)
chr7 (136-219)||(1044064-1044147)
chr7 (30-89)||(8076809-8076868)
chr7 (136-235)||(11289178-11289277)
chr7 (132-234)||(13346510-13346613)
chr7 (30-89)||(27256995-27257054)
chr7 (295-334)||(27257239-27257278)
chr7 (295-334)||(40864434-40864473)
chr7 (136-218)||(15573903-15573985)
chr7 (93-187)||(40864581-40864674)
chr7 (81-187)||(40997976-40998081)
chr7 (117-187)||(43520243-43520313)
chr7 (30-63)||(11289354-11289387)
chr7 (13-70)||(16459678-16459735)
chr7 (93-165)||(23866651-23866723)
chr7 (25-89)||(32302590-32302654)
chr7 (18-62)||(45169236-45169280)
chr7 (136-234)||(10499267-10499366)
chr7 (136-234)||(10504296-10504395)
chr7 (112-235)||(11247373-11247496)
chr7 (136-219)||(15566163-15566246)
chr7 (9-64)||(47552770-47552825)
chr7 (197-235)||(10488277-10488315)
chr7 (19-61)||(10488602-10488644)
chr7 (9-63)||(10499401-10499455)
chr7 (9-63)||(10504430-10504484)
chr7 (158-235)||(40864554-40864631)
chr7 (25-63)||(47342355-47342393)
chr7 (30-63)||(11247702-11247735)
chr7 (340-369)||(23443597-23443626)
chr7 (33-62)||(40998060-40998089)
chr7 (30-62)||(1044042-1044074)
chr7 (30-78)||(11288925-11288973)
chr7 (25-61)||(11289292-11289328)
chr7 (30-78)||(11296726-11296774)
chr7 (111-234)||(13343577-13343700)
chr7 (340-368)||(15820469-15820497)
chr7 (340-368)||(37285965-37285993)
chr7 (298-334)||(47102560-47102596)
[»] scaffold1910 (2 HSPs)
scaffold1910 (9-239)||(593-803)
scaffold1910 (295-493)||(859-1057)
[»] chr6 (40 HSPs)
chr6 (9-234)||(14073862-14074089)
chr6 (42-239)||(18387670-18387866)
chr6 (368-489)||(25971326-25971447)
chr6 (66-235)||(26981471-26981642)
chr6 (368-489)||(25975766-25975887)
chr6 (66-235)||(27073853-27074024)
chr6 (9-164)||(16625143-16625302)
chr6 (95-235)||(6111913-6112054)
chr6 (295-367)||(18387922-18387994)
chr6 (42-187)||(2077559-2077706)
chr6 (295-362)||(14074149-14074216)
chr6 (295-366)||(26981702-26981773)
chr6 (295-366)||(27074084-27074155)
chr6 (66-183)||(19772259-19772376)
chr6 (42-166)||(15704132-15704258)
chr6 (80-187)||(16625326-16625433)
chr6 (9-76)||(26981322-26981389)
chr6 (67-164)||(27073742-27073843)
chr6 (368-486)||(2280640-2280758)
chr6 (101-211)||(2759365-2759475)
chr6 (42-164)||(26981333-26981461)
chr6 (95-219)||(15645476-15645600)
chr6 (9-64)||(2759469-2759524)
chr6 (10-89)||(15704189-15704268)
chr6 (18-76)||(16761128-16761186)
chr6 (18-76)||(22807096-22807154)
chr6 (101-217)||(2759551-2759662)
chr6 (112-235)||(15641103-15641226)
chr6 (18-76)||(14322701-14322759)
chr6 (9-63)||(15990977-15991030)
chr6 (18-76)||(22949968-22950026)
chr6 (18-76)||(22953924-22953982)
chr6 (18-76)||(23872412-23872470)
chr6 (18-76)||(23876368-23876426)
chr6 (18-76)||(27324352-27324410)
chr6 (180-235)||(2862688-2862743)
chr6 (295-334)||(6111767-6111806)
chr6 (20-61)||(15641049-15641090)
chr6 (30-63)||(26981455-26981488)
chr6 (341-369)||(15666305-15666333)
[»] chr5 (46 HSPs)
chr5 (9-235)||(8770980-8771206)
chr5 (30-229)||(41099408-41099609)
chr5 (30-235)||(21827083-21827292)
chr5 (368-489)||(38095797-38095918)
chr5 (30-219)||(23976733-23976922)
chr5 (9-164)||(26869522-26869681)
chr5 (9-164)||(41099257-41099414)
chr5 (66-235)||(36936662-36936831)
chr5 (66-235)||(36941416-36941585)
chr5 (56-235)||(13300641-13300821)
chr5 (66-234)||(557469-557637)
chr5 (80-234)||(562255-562409)
chr5 (80-234)||(12044284-12044438)
chr5 (66-235)||(42002207-42002376)
chr5 (295-366)||(21827352-21827423)
chr5 (295-366)||(26869324-26869395)
chr5 (81-235)||(15395006-15395162)
chr5 (42-207)||(1429355-1429522)
chr5 (81-234)||(3666660-3666815)
chr5 (80-235)||(32460700-32460850)
chr5 (295-358)||(41099673-41099736)
chr5 (56-227)||(31732299-31732476)
chr5 (427-493)||(37609653-37609719)
chr5 (66-187)||(21323219-21323340)
chr5 (66-187)||(41997438-41997559)
chr5 (42-164)||(21826961-21827089)
chr5 (9-76)||(21826950-21827017)
chr5 (30-85)||(26869473-26869528)
chr5 (366-431)||(16679048-16679113)
chr5 (134-196)||(2451758-2451820)
chr5 (18-76)||(10755485-10755543)
chr5 (158-235)||(21323192-21323270)
chr5 (30-76)||(41997422-41997468)
chr5 (325-366)||(15394827-15394868)
chr5 (134-205)||(24435361-24435433)
chr5 (295-334)||(13300521-13300560)
chr5 (295-334)||(21323072-21323111)
chr5 (25-63)||(3666644-3666682)
chr5 (9-63)||(36949521-36949575)
chr5 (31-63)||(15395140-15395172)
chr5 (295-334)||(2451972-2452011)
chr5 (35-89)||(21323297-21323351)
chr5 (30-63)||(557453-557486)
chr5 (30-63)||(36936814-36936847)
chr5 (30-63)||(36941568-36941601)
chr5 (30-63)||(42002191-42002224)
[»] chr1 (55 HSPs)
chr1 (20-235)||(52100236-52100453)
chr1 (30-229)||(21498529-21498730)
chr1 (20-239)||(26199230-26199453)
chr1 (9-235)||(22428333-22428563)
chr1 (9-234)||(16836436-16836652)
chr1 (9-234)||(2367770-2367998)
chr1 (9-234)||(2384384-2384613)
chr1 (9-164)||(21498378-21498535)
chr1 (368-489)||(37891821-37891942)
chr1 (66-235)||(19725058-19725227)
chr1 (66-235)||(19727138-19727307)
chr1 (366-493)||(23089559-23089686)
chr1 (52-235)||(41097110-41097294)
chr1 (39-164)||(52100437-52100564)
chr1 (66-235)||(3094863-3095032)
chr1 (80-235)||(40232544-40232699)
chr1 (102-234)||(1067228-1067360)
chr1 (9-155)||(14804231-14804381)
chr1 (295-366)||(14813573-14813644)
chr1 (81-227)||(13894083-13894232)
chr1 (295-363)||(2368060-2368128)
chr1 (295-363)||(2384254-2384322)
chr1 (295-362)||(21498794-21498861)
chr1 (295-362)||(52100119-52100186)
chr1 (295-366)||(22428203-22428274)
chr1 (113-225)||(8267034-8267146)
chr1 (366-490)||(29245145-29245269)
chr1 (366-486)||(50708570-50708690)
chr1 (9-100)||(14819699-14819790)
chr1 (42-164)||(26199096-26199224)
chr1 (66-219)||(17213613-17213764)
chr1 (366-486)||(13926582-13926702)
chr1 (295-366)||(16836305-16836376)
chr1 (42-235)||(23284990-23285186)
chr1 (83-187)||(26319423-26319528)
chr1 (87-187)||(39036751-39036851)
chr1 (366-486)||(48650713-48650833)
chr1 (80-187)||(39036890-39036997)
chr1 (189-239)||(14813467-14813517)
chr1 (117-235)||(8273308-8273427)
chr1 (9-58)||(19725215-19725264)
chr1 (295-334)||(19724959-19724998)
chr1 (111-226)||(27308089-27308204)
chr1 (295-334)||(40232424-40232463)
chr1 (18-76)||(1924354-1924412)
chr1 (25-63)||(13894067-13894105)
chr1 (18-76)||(20923368-20923426)
chr1 (18-76)||(39243314-39243372)
chr1 (18-76)||(39246869-39246927)
chr1 (18-76)||(41387266-41387324)
chr1 (295-334)||(13894269-13894308)
chr1 (9-63)||(19727101-19727155)
chr1 (30-63)||(3094847-3094880)
chr1 (155-187)||(23254398-23254430)
chr1 (19-63)||(23285143-23285187)
[»] scaffold0327 (5 HSPs)
scaffold0327 (30-239)||(8734-8945)
scaffold0327 (9-164)||(19430-19589)
scaffold0327 (295-366)||(8607-8678)
scaffold0327 (80-164)||(8939-9027)
scaffold0327 (30-63)||(19403-19436)
[»] scaffold0015 (10 HSPs)
scaffold0015 (30-234)||(192757-192963)
scaffold0015 (9-164)||(193477-193634)
scaffold0015 (20-164)||(193087-193233)
scaffold0015 (30-164)||(192957-193093)
scaffold0015 (30-164)||(193347-193483)
scaffold0015 (30-164)||(193217-193353)
scaffold0015 (30-130)||(187716-187818)
scaffold0015 (295-362)||(192630-192697)
scaffold0015 (80-164)||(187812-187898)
scaffold0015 (9-63)||(187895-187949)
[»] chr4 (61 HSPs)
chr4 (30-239)||(14867938-14868150)
chr4 (9-239)||(26034915-26035147)
chr4 (9-234)||(9190687-9190916)
chr4 (27-239)||(14891352-14891569)
chr4 (9-164)||(14868276-14868435)
chr4 (9-164)||(14898824-14898983)
chr4 (66-227)||(39320336-39320496)
chr4 (52-235)||(3997217-3997401)
chr4 (372-493)||(36895942-36896063)
chr4 (30-164)||(14868144-14868282)
chr4 (30-164)||(14898580-14898718)
chr4 (56-235)||(7902263-7902443)
chr4 (9-150)||(14877499-14877644)
chr4 (66-224)||(13521147-13521305)
chr4 (42-187)||(15225903-15226050)
chr4 (9-100)||(9184960-9185051)
chr4 (296-366)||(9184717-9184787)
chr4 (27-164)||(14898468-14898611)
chr4 (27-164)||(14898712-14898855)
chr4 (297-366)||(26035206-26035276)
chr4 (30-100)||(14898404-14898474)
chr4 (295-364)||(14891228-14891296)
chr4 (66-187)||(34561198-34561319)
chr4 (366-486)||(29359487-29359607)
chr4 (66-187)||(31297696-31297814)
chr4 (295-366)||(14867811-14867882)
chr4 (296-366)||(9190556-9190626)
chr4 (132-235)||(9184847-9184950)
chr4 (9-89)||(15225892-15225972)
chr4 (366-486)||(21382345-21382465)
chr4 (366-486)||(28389098-28389218)
chr4 (85-164)||(14891538-14891621)
chr4 (366-486)||(16908760-16908880)
chr4 (10-89)||(15011094-15011173)
chr4 (111-166)||(15804978-15805033)
chr4 (66-235)||(41817569-41817729)
chr4 (81-187)||(3310013-3310121)
chr4 (42-124)||(15011079-15011163)
chr4 (18-76)||(10713685-10713743)
chr4 (18-76)||(10927455-10927513)
chr4 (18-76)||(12488543-12488601)
chr4 (158-235)||(34561268-34561346)
chr4 (135-224)||(1150517-1150606)
chr4 (30-102)||(31297758-31297830)
chr4 (295-334)||(3992804-3992843)
chr4 (18-76)||(14953355-14953413)
chr4 (18-76)||(25690730-25690788)
chr4 (81-125)||(12383561-12383605)
chr4 (295-334)||(34561427-34561466)
chr4 (30-69)||(41817553-41817592)
chr4 (295-334)||(41817809-41817848)
chr4 (93-148)||(42314838-42314893)
chr4 (33-63)||(1150640-1150670)
chr4 (169-235)||(15799286-15799351)
chr4 (30-63)||(3310002-3310035)
chr4 (30-63)||(13521288-13521321)
chr4 (339-368)||(15580520-15580549)
chr4 (30-63)||(34561182-34561215)
chr4 (30-63)||(47575420-47575453)
chr4 (155-219)||(3310067-3310131)
chr4 (27-104)||(14898420-14898499)
[»] scaffold0132 (2 HSPs)
scaffold0132 (9-235)||(24433-24663)
scaffold0132 (295-366)||(24301-24372)
[»] scaffold0863 (2 HSPs)
scaffold0863 (30-234)||(2-208)
scaffold0863 (299-362)||(272-335)
[»] scaffold0044 (8 HSPs)
scaffold0044 (30-234)||(81416-81622)
scaffold0044 (30-234)||(65168-65374)
scaffold0044 (9-164)||(64887-65044)
scaffold0044 (30-164)||(65038-65174)
scaffold0044 (295-362)||(65434-65501)
scaffold0044 (295-362)||(81682-81749)
scaffold0044 (66-164)||(81322-81422)
scaffold0044 (9-63)||(81285-81339)
[»] chr3 (62 HSPs)
chr3 (30-235)||(8223813-8224020)
chr3 (30-232)||(18349787-18349991)
chr3 (30-234)||(8197330-8197536)
chr3 (9-234)||(51923061-51923288)
chr3 (30-234)||(30106-30312)
chr3 (27-239)||(14424864-14425082)
chr3 (9-164)||(8223662-8223819)
chr3 (9-164)||(18349985-18350142)
chr3 (18-164)||(29964-30112)
chr3 (368-489)||(18255938-18256059)
chr3 (9-164)||(14425051-14425210)
chr3 (9-164)||(8197179-8197336)
chr3 (52-235)||(10585342-10585526)
chr3 (66-235)||(3034417-3034586)
chr3 (66-235)||(8888704-8888873)
chr3 (66-234)||(8070453-8070621)
chr3 (80-235)||(3693407-3693562)
chr3 (66-234)||(8883944-8884112)
chr3 (295-362)||(30372-30439)
chr3 (295-362)||(18349658-18349725)
chr3 (133-234)||(6595581-6595682)
chr3 (66-183)||(18699061-18699178)
chr3 (83-194)||(16048784-16048896)
chr3 (366-490)||(52419078-52419202)
chr3 (295-362)||(51923349-51923416)
chr3 (295-352)||(8197594-8197651)
chr3 (80-187)||(3673375-3673482)
chr3 (80-187)||(53358893-53359000)
chr3 (93-235)||(12898900-12899042)
chr3 (66-164)||(45903767-45903865)
chr3 (111-187)||(631782-631858)
chr3 (83-194)||(16043291-16043403)
chr3 (366-486)||(38656207-38656327)
chr3 (83-205)||(16055966-16056089)
chr3 (366-486)||(31486932-31487052)
chr3 (366-490)||(36947440-36947564)
chr3 (10-89)||(22758458-22758537)
chr3 (9-63)||(11997288-11997342)
chr3 (42-124)||(22758443-22758527)
chr3 (295-338)||(8224079-8224122)
chr3 (9-63)||(6595697-6595751)
chr3 (18-76)||(16749211-16749269)
chr3 (366-456)||(18198441-18198531)
chr3 (18-76)||(19776630-19776688)
chr3 (18-76)||(4106626-4106684)
chr3 (18-76)||(4110478-4110536)
chr3 (18-76)||(15965791-15965849)
chr3 (18-76)||(15969715-15969773)
chr3 (18-76)||(15973639-15973697)
chr3 (18-76)||(37438851-37438909)
chr3 (18-62)||(8488696-8488740)
chr3 (18-62)||(9706896-9706940)
chr3 (30-89)||(45903822-45903881)
chr3 (111-178)||(53502362-53502429)
chr3 (368-410)||(9372585-9372627)
chr3 (30-63)||(3034401-3034434)
chr3 (30-63)||(8070437-8070470)
chr3 (30-63)||(8883928-8883961)
chr3 (30-63)||(8888688-8888721)
chr3 (341-370)||(13111827-13111856)
chr3 (298-330)||(6595464-6595496)
chr3 (9-101)||(16048730-16048822)
[»] scaffold0019 (3 HSPs)
scaffold0019 (9-164)||(30411-30570)
scaffold0019 (80-187)||(24278-24385)
scaffold0019 (30-89)||(24248-24307)
[»] scaffold0061 (1 HSPs)
scaffold0061 (30-235)||(49115-49320)
[»] scaffold0017 (1 HSPs)
scaffold0017 (30-235)||(149314-149519)
[»] scaffold0060 (3 HSPs)
scaffold0060 (56-235)||(47125-47305)
scaffold0060 (56-235)||(52069-52249)
scaffold0060 (295-334)||(51947-51986)
[»] scaffold0045 (3 HSPs)
scaffold0045 (35-187)||(83663-83817)
scaffold0045 (30-63)||(83680-83713)
scaffold0045 (298-334)||(83929-83965)
[»] scaffold0182 (1 HSPs)
scaffold0182 (56-235)||(9031-9212)
[»] scaffold0155 (3 HSPs)
scaffold0155 (297-367)||(22539-22609)
scaffold0155 (180-235)||(22422-22477)
scaffold0155 (9-58)||(22379-22428)
[»] scaffold0009 (1 HSPs)
scaffold0009 (106-215)||(71928-72037)
[»] scaffold0018 (1 HSPs)
scaffold0018 (42-183)||(22054-22197)
[»] scaffold0575 (2 HSPs)
scaffold0575 (66-187)||(5081-5202)
scaffold0575 (10-187)||(1973-2130)
[»] scaffold0011 (2 HSPs)
scaffold0011 (66-183)||(127176-127293)
scaffold0011 (10-63)||(127140-127193)
[»] scaffold0292 (1 HSPs)
scaffold0292 (42-183)||(7914-8057)
[»] scaffold0232 (2 HSPs)
scaffold0232 (80-187)||(22679-22786)
scaffold0232 (25-63)||(22644-22682)
[»] scaffold0205 (2 HSPs)
scaffold0205 (66-187)||(26836-26957)
scaffold0205 (30-63)||(26820-26853)
[»] scaffold0628 (3 HSPs)
scaffold0628 (42-183)||(7135-7278)
scaffold0628 (10-71)||(7125-7186)
scaffold0628 (296-329)||(7457-7490)
[»] scaffold0035 (1 HSPs)
scaffold0035 (42-187)||(6717-6864)
[»] scaffold0211 (2 HSPs)
scaffold0211 (81-234)||(22956-23111)
scaffold0211 (111-187)||(27555-27631)
[»] scaffold0070 (6 HSPs)
scaffold0070 (80-187)||(59213-59320)
scaffold0070 (80-187)||(63415-63522)
scaffold0070 (158-235)||(59269-59347)
scaffold0070 (158-235)||(63471-63549)
scaffold0070 (296-334)||(59429-59467)
scaffold0070 (296-334)||(63631-63669)
[»] scaffold0020 (3 HSPs)
scaffold0020 (80-187)||(440-547)
scaffold0020 (295-329)||(298-332)
scaffold0020 (158-235)||(413-491)
[»] scaffold0041 (4 HSPs)
scaffold0041 (66-187)||(34903-35024)
scaffold0041 (158-235)||(34876-34954)
scaffold0041 (295-334)||(34756-34795)
scaffold0041 (30-89)||(34981-35040)
[»] scaffold0389 (1 HSPs)
scaffold0389 (299-362)||(518-579)
[»] scaffold0097 (1 HSPs)
scaffold0097 (366-486)||(52201-52321)
[»] scaffold0141 (1 HSPs)
scaffold0141 (18-76)||(13303-13361)
[»] scaffold0431 (1 HSPs)
scaffold0431 (18-76)||(14768-14826)
[»] scaffold0157 (1 HSPs)
scaffold0157 (18-76)||(31876-31934)
[»] scaffold0144 (1 HSPs)
scaffold0144 (18-76)||(7622-7680)
[»] scaffold0572 (1 HSPs)
scaffold0572 (18-62)||(10281-10325)
[»] scaffold0229 (1 HSPs)
scaffold0229 (18-76)||(10717-10775)
[»] scaffold0124 (1 HSPs)
scaffold0124 (18-76)||(21278-21335)
[»] scaffold0008 (1 HSPs)
scaffold0008 (9-63)||(256571-256625)
[»] scaffold0484 (1 HSPs)
scaffold0484 (298-331)||(7938-7971)
[»] scaffold0253 (2 HSPs)
scaffold0253 (341-370)||(10335-10364)
scaffold0253 (341-370)||(19760-19789)
[»] scaffold0206 (1 HSPs)
scaffold0206 (340-368)||(9133-9161)
[»] scaffold0183 (1 HSPs)
scaffold0183 (341-369)||(20676-20704)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 16066584 - 16066357
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16066584 aaaatatcccaattgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatatgttattcagtacataaatatattattgtgt 16066485  T
Q  109 atcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 208  Q
    ||||||||||   |||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16066484 atcaaaatat---tcagatcaaacactaaaatatattagattgcctaccaaaatattttggattgtgctccaaaatattctagattacgttctaaaatat 16066388  T
Q  209 tttagcaaaacatggggacaaagaaaagcac 239  Q
    |||||||||||||||||||||||||||||||    
T  16066387 tttagcaaaacatggggacaaagaaaagcac 16066357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 22104555 - 22104768
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatat--ttcag 125  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||  || ||    
T  22104555 aaaatatatcatattgagtagaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatatttaag 22104654  T
Q  126 gtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatgggg 225  Q
     |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |    
T  22104655 atcaaacactaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggag 22104754  T
Q  226 acaaagaaaagcac 239  Q
    ||||||||||||||    
T  22104755 acaaagaaaagcac 22104768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 4582663 - 4582433
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatata-ttatgcagtacataaatttgt--tattcagtacataaatatat--tat 103  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||||||||||| |||| |||||||||||| |||  ||||||||||||||||||||  |||    
T  4582663 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatataattattcagtacataaatatgtattattcagtacataaatatatattat 4582564  T
Q  104 tgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaa 203  Q
    || ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| | ||| ||    
T  4582563 tgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatattttagattgtgttccaaaatattctagattgcattccaa 4582464  T
Q  204 aatattttagcaaaacatggggacaaagaaa 234  Q
    |||| ||||||||||| ||||||| ||||||    
T  4582463 aataatttagcaaaacttggggaccaagaaa 4582433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 22104402 - 22104561
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||     
T  22104402 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 22104501  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  22104502 gtatcaaaatatatatttcagatcaaacactaaaatatattagattgcctaccaaaatat 22104561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 19393098 - 19392939
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||     
T  19393098 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 19392999  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| |||||||||||||||||||  ||||||||||||    
T  19392998 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgtctaccaaaatat 19392939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 4237661 - 4237492
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  4237661 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 4237562  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  4237561 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 4237492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 4242400 - 4242231
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  4242400 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 4242301  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  4242300 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 4242231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 19391386 - 19391268
Alignment:
Q  95 atatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagatt 194  Q
    ||||| ||||| ||||||||||||||||||| |||  ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||    
T  19391386 atatactattgagtatcaaaatatatttcagatcatgcactaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagatt 19391287  T
Q  195 acgttctaaaatattttag 213  Q
     ||||||||||||||||||    
T  19391286 gcgttctaaaatattttag 19391268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 31449185 - 31449018
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||||||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  31449185 agtacaaaaatatattattcagtacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 31449086  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaa 233  Q
    |  ||||||||||| ||||||| |||||| ||||| ||| |||||||| ||||| ||||||| |||||    
T  31449085 tcagattgtgttcctaaatattctagattgcgttccaaattattttagtaaaacttggggactaagaa 31449018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 227
Target Start/End: Original strand, 37772468 - 37772640
Alignment:
Q  56 tatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    |||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| |||  || |||||||||||||||| | ||    
T  37772468 tatattattcaatacatgaatatattattgactacagaaatatattattgactatcaaaatatatttcagatcatgcattaaaatatattagattgctta 37772567  T
Q  156 ccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggac 227  Q
    |||||||||||  |||||| |||||||||||| || ||| ||||| |||||| |||||||| ||| |||||||    
T  37772568 ccaaaatatttcagattgtattccaaaatattctaaattgcgttccaaaatatttttagcagaacttggggac 37772640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 4582373 - 4582306
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4582373 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttgggtcaaaaattggggtat 4582306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 22104825 - 22104896
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  22104825 ctagtgcttacttcgttcacacaattatgtacctccattatataatcttgggtcaaaaattggggtatgaca 22104896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 19392955 - 19392875
Alignment:
Q  20 attgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat 100  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  19392955 attgtctaccaaaatatattatattgagcacaaaaatatattattcagtacataaatatgttattcagtacataaatatat 19392875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 25733529 - 25733382
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| ||||   |||||||||||| ||||||||||||  ||||||||||||||||||   ||  ||||||||    
T  25733529 attgagtactaaaatatattatattaagtacaaaaatacattattcagtacaaaaatatattattaagtatcaaaatatatttcaaagcatgcactaaaa 25733430  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  25733429 tatattagattgcctaccaaaatatttcagattgtgttgcaaaatatt 25733382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 372 - 462
Target Start/End: Complemental strand, 37589392 - 37589302
Alignment:
Q  372 gaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtacc 462  Q
    |||||| |||||||| ||||||||||||| || ||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||    
T  37589392 gaataaacacctttttacctatattagattcagatattacctctgcctcgagcacaaatttacccatctttataataatcaatcttgtacc 37589302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 19961443 - 19961323
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| ||||| |||||||| ||| ||||||||  | | |||||||||||||| | ||| |||||||| ||| |||| ||||||||    
T  19961443 accttggaataaacaccttctcaccgatattagaaccagatattacccgtccttcgagcacaaattttctcatctttgtaatgatcaatctcgtaccgtt 19961344  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  19961343 acataagcccaaactttgatc 19961323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 23915239 - 23915386
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||  ||||||||||||||||||    |   |||||||    
T  23915239 attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatattattaagtatcaaaatatatttcaaagtatgtactaaaa 23915338  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  23915339 tatattagattgcctaccaaaatatttcagattgtgttgcaaaatatt 23915386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 42972911 - 42973036
Alignment:
Q  101 tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttc 200  Q
    |||| |||||||||||||||||| | |  | ||||||||||||||| | | |||| |||||||||||  |||||||||||||||||| |||||| |||||    
T  42972911 tattatgtatcaaaatatatttctgattgagcactaaaatatattatactgcctaacaaaatattttt-attgtgttccaaaatattttagattgcgttc 42973009  T
Q  201 taaaatattttagcaaaacatggggac 227  Q
     ||||||||||| |||||| |||||||    
T  42973010 caaaatattttaccaaaacttggggac 42973036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 43302006 - 43301905
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||||||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| ||||| ||||    
T  43302006 agtacaaaaatatattattcagtacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttccaaattatt 43301907  T
Q  166 tt 167  Q
    ||    
T  43301906 tt 43301905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 23827583 - 23827463
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||| | |||||| ||||| |||||||| ||  ||||||||  | | |||||||||||||| || || |||||||| ||| |||| ||||||||    
T  23827583 accttggaatcaacaccttctcaccgatattagaacctgatattacccgtccttcgagcacaaattttcctatctttgtaatgatcaatctcgtaccgtt 23827484  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  23827483 acataagcccaaactttgatc 23827463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 16066297 - 16066238
Alignment:
Q  299 tgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggg 358  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  16066297 tgcttactttgttcgcacaattatgtacccccattatataatcttaggtccaaaattggg 16066238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 25367293 - 25367186
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| |||   |||||||||  ||||||| | | | |||||||| | ||||| |||||    
T  25367293 ttattcagtacaaaaatatattattgagtatcaaaatatatttcagatcatgtactaaaataatttagattgcgttctaaaatattctagattgcgttcc 25367194  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  25367193 aaaatatt 25367186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 34818026 - 34817928
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||| |||   |||||||||| ||||||| | | |||||||||    
T  34818026 agtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcagatcatgtactaaaatattttagattgcgttccaaaatat 34817928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 23915229 - 23915308
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| |||| | ||||| ||||    
T  23915229 aaatatctcaattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaatatattattaagta 23915308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 8330683 - 8330564
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||||  | ||||||| |||   |||||||||| ||||||| | | ||||||||||    
T  8330683 agtacaaaaatatattattcagtacaaaaatatattattgagtatcaaa--acatttcagatcatgtactaaaatattttagattgcgttccaaaatatt 8330586  T
Q  166 ttggattgtgttccaaaatatt 187  Q
     | ||||| |||||||||||||    
T  8330585 cttgattgcgttccaaaatatt 8330564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 21411768 - 21411826
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  21411768 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 21411826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 21806260 - 21806318
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  21806260 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 21806318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 43302022 - 43301976
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  43302022 aaaatatatcatattgagtacaaaaatatattattcagtacataaat 43301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 8330615 - 8330537
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||| ||||| ||||||||||||| | |||| ||||| |||||| ||||| |||||| ||||||| |||||||    
T  8330615 aaaatattttagattgcgttccaaaatattcttgattgcgttccaaaatatttttatcaaaacttggggactaagaaaa 8330537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 14036271 - 14036357
Alignment:
Q  101 tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||| ||| |||| |||||||||| ||||  || ||||||||||||||| | || ||||||||||  ||||| |||||||||||||    
T  14036271 tattgagtaccaaagtatatttcagatcaagtaccaaaatatattagattgcatatcaaaatatttcagattgcgttccaaaatatt 14036357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 18861928 - 18861870
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  18861928 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 18861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 21384489 - 21384542
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtaca 71  Q
    |||||| |||| |||||||||||||||  ||||||||||||||||| |||||||    
T  21384489 caattgagtaccaaaatatattatattaggtacaaaaatatattattcagtaca 21384542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 21387909 - 21387962
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtaca 71  Q
    |||||| |||| |||||||||||||||  ||||||||||||||||| |||||||    
T  21387909 caattgagtaccaaaatatattatattaggtacaaaaatatattattcagtaca 21387962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21827297 - 21827253
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatatta 62  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  21827297 caattgagtaccaaaatatattatattaagtacaaaaatatatta 21827253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 25361795 - 25361759
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtaccccca 331  Q
    ||||||||||||||||||||| |||||||||||||||    
T  25361795 ctagtgcttacttcgttcacataattatgtaccccca 25361759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 8330699 - 8330640
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    |||||||||  ||||||||||||||||||||||| ||||||| |||| | ||||| ||||    
T  8330699 aaaatatatcttattgagtacaaaaatatattattcagtacaaaaatatattattgagta 8330640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 34818042 - 34817983
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    |||||||||  ||||||||||||||||||||||| ||||||| |||| | ||||| ||||    
T  34818042 aaaatatatcttattgagtacaaaaatatattattcagtacagaaatatattattgagta 34817983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 424
Target Start/End: Original strand, 22730171 - 22730229
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagc 424  Q
    |||||||||||| |||||| ||||| |||||||| ||| ||||||||| | ||||||||    
T  22730171 accttggaataaacaccttctcaccgatattagaaccagatattacctgtccctcgagc 22730229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 4237677 - 4237644
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  4237677 aaaatatatcatattgagtacaaaaatatattat 4237644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 4242416 - 4242383
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  4242416 aaaatatatcatattgagtacaaaaatatattat 4242383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 12843974 - 12843946
Alignment:
Q  340 tcttaggtcaaaaattggggtatgacacc 368  Q
    |||||||||||||||||||||||||||||    
T  12843974 tcttaggtcaaaaattggggtatgacacc 12843946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 367
Target Start/End: Complemental strand, 25642976 - 25642948
Alignment:
Q  339 atcttaggtcaaaaattggggtatgacac 367  Q
    |||||||||||||||||||||||||||||    
T  25642976 atcttaggtcaaaaattggggtatgacac 25642948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 191; Significance: 1e-103; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 199917 - 200147
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  199917 aaaatatcctaattgagtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatatgttattcagtacataaatatattattgtgt 200016  T
Q  109 atcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 208  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| |||||| |||||||||||||    
T  200017 atcaaaatatatttcaggtcaaatactaaaatatattagattgcctaccaaaatatttcggattgtgtttcaaaatattctagattgcgttctaaaatat 200116  T
Q  209 tttagcaaaacatggggacaaagaaaagcac 239  Q
    | |||||||||||||||||||||||||||||    
T  200117 tctagcaaaacatggggacaaagaaaagcac 200147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 200204 - 200275
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  200204 ctagtgcttacttcattcacacaattatgtacccccatcatataatcttaggtcaaaaattggggtatgaca 200275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 2e-96; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 377657 - 377427
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  377657 aaaatatctcaattgagtactaaagtatattatattgagtacaaaaatatattatgcagtacataaatatgttattcagtacataaatatattattgtgt 377558  T
Q  109 atcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 208  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||  ||||||||||||    
T  377557 atcaaaatatatttcatatcaaacactaaaatatattagattgcctatcaaaatattttggattgtgtttcaaaatattctagattgtgttctaaaatat 377458  T
Q  209 tttagcaaaacatggggacaaagaaaagcac 239  Q
    | |||||||||||||||||||||||||||||    
T  377457 tctagcaaaacatggggacaaagaaaagcac 377427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 24292829 - 24292601
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgt 106  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||  |||||     
T  24292829 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgtcattcagtacataaatatatattattga 24292730  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaat 206  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||| |||||||||||    
T  24292729 gtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatattttcgattgtattccaaaatattctagattgcgttctaaaat 24292630  T
Q  207 attttagcaaaacatggggacaaagaaaa 235  Q
    | ||||||||||| ||||||| |||||||    
T  24292629 aatttagcaaaacttggggaccaagaaaa 24292601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 34070287 - 34070503
Alignment:
Q  20 attgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaata 117  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||| |||||||||||    
T  34070287 attgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaata 34070386  T
Q  118 tatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaa 217  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  34070387 tatttcagctcaagcactaaaatatattagattgcctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaa 34070486  T
Q  218 acatggggacaaagaaa 234  Q
    || ||||||| ||||||    
T  34070487 acttggggaccaagaaa 34070503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 7559708 - 7559482
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    |||||||  ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| || ||    
T  7559708 aaaatatttcaattgtgtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatacattactgagt 7559609  T
Q  109 atcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 208  Q
    |||||||||||||| || || | |||||||||| |||||||| |||||||||||||||  ||||||||||||||||||| ||| || |||||||||||||    
T  7559608 atcaaaatatattttagatctagcactaaaatacattagattgcctaccaaaatatttcagattgtgttccaaaatattttagtttgcgttctaaaatat 7559509  T
Q  209 tttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||||| |||||||||||||||    
T  7559508 tttagcaaaacttggggacaaagaaaa 7559482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 42249086 - 42249287
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||  ||||||| ||||||||||||||||||| |    
T  42249086 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttatttagtacataaatatatattattgagtatcaaaatatatttcagat 42249185  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| || ||||||||| ||||||||||| |||||||    
T  42249186 caagcactaaaatatattagattacctaccaaaatattttagattgtgttccaaaatattctagattgcgatctaaaataatttagcaaaacttggggac 42249285  T
Q  228 aa 229  Q
    ||    
T  42249286 aa 42249287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 12 - 235
Target Start/End: Original strand, 25375628 - 25375849
Alignment:
Q  12 atatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatc 111  Q
    ||||| || ||| |||| ||||| ||||||||||||||| |||||| ||||| ||||||||||||||| |||||| ||||| |||||||||||| |||||    
T  25375628 atatctcagttgagtaccaaaatctattatattgagtaccaaaatacattattcagtacataaatttgatattcaatacattaatatattattgagtatc 25375727  T
Q  112 aaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt 211  Q
    ||  |||||||||| | |||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||    
T  25375728 aa--tatatttcagataaaacactaaaatatattaaattgcctaccaaaatatttcagattgtgttccaaaatattatagattgcattctaaaatatttt 25375825  T
Q  212 agcaaaacatggggacaaagaaaa 235  Q
    || ||||| |||||| ||||||||    
T  25375826 agtaaaacttggggagaaagaaaa 25375849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 24286135 - 24285924
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatattt 122  Q
    |||||||||||||| ||||  ||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||  ||||| |||| |||||||||||    
T  24286135 actaaaatatattagattgcctaccaaaatatatcatattgagtacaaaaatattttattcagtacataaatatatattattgagtattaaaatatattt 24286036  T
Q  123 caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatg 222  Q
    ||| |||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||  |||||| |||||||||||| | ||||||||| ||    
T  24286035 cagatcaagcactaaaatatattagattgcctaccaaaatattttagattgtattccaaaatatgctagattgcgttctaaaataatgtagcaaaacttg 24285936  T
Q  223 gggacaaagaaa 234  Q
    ||||| ||||||    
T  24285935 gggaccaagaaa 24285924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 24286252 - 24286104
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaaa 115  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||  ||||||||| |||||||||    
T  24286252 caattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgtcattcagtacataaatatatattattgagtatcaaaa 24286153  T
Q  116 tatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  24286152 tatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 24286104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 6856924 - 6857081
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    |||||||| |||||| |||||||||||||| | ||| |||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||     
T  6856924 aaaatatctcaattgagtactaaaatatatcacattaagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 6857023  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    | ||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||||    
T  6857024 gcatcaaaatatatttcagatcaagcacgaaaatatattagattgcctaccaaaatat 6857081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 6857075 - 6857220
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||| |||||||||| |||||||| |    
T  6857075 aaaatatatcatatttagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatgtatttcagat 6857174  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattg 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| |||||    
T  6857175 caagcactaaaatatattagattgcctaccaaaatattttagattg 6857220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 34070146 - 34070303
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    ||||||| |||||||| ||| ||||||||| |||||||||| |||||||||||||  ||||||||||| |||||||||||||||||  |||||||||||     
T  34070146 aaaatatgccaattgtctaccaaaatatatcatattgagtaaaaaaatatattatttagtacataaatatgttattcagtacataaatatatattattga 34070245  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||    
T  34070246 gtatcaaaatatatttcagatcaagcactaaaatatattagattgtctaccaaaatat 34070303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 26903012 - 26903149
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||  |||||||||||||||||| |    
T  26903012 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgaatatcaaaatatatttcagat 26903111  T
Q  128 caaacactaaaatatattagatttcctaccaaaatatt 165  Q
    ||| ||||||||||||||||||| | ||||||||||||    
T  26903112 caagcactaaaatatattagattgcttaccaaaatatt 26903149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 42 - 235
Target Start/End: Complemental strand, 17452933 - 17452738
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||| | |||| | ||||||||||||||||||||||||||  ||||||||||||||||||  ||  ||| ||||    
T  17452933 attgagtaccaaaatatattatattgagtagaaaaatatattattcagtacataaatatattattgactatcaaaatatatttcagaccatgcacaaaaa 17452834  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||||| |||||||||||||||   |||||||||||||||||| |||||| ||||||||||||||| |||||||| | ||||| |||||||    
T  17452833 tatattagattgcctaccaaaatatttcaaattgtgttccaaaatattctagattgcgttctaaaatatttcagcaaaacttagggaccaagaaaa 17452738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 28855917 - 28856064
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||| |||   |||||||||||||||||| |||||||||||||||   ||||| ||||    
T  28855917 ttattcagtgcataaatatattattgagtatcaaaatatatttcagatcatgtactaaaatatattagattacctaccaaaatatttcatattgtattcc 28856016  T
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    |||||||| |||||| ||||| |||||||||||||||||| |||||||    
T  28856017 aaaatattctagattgcgttccaaaatattttagcaaaacttggggac 28856064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 10160025 - 10159868
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctacca---aaatattttggattgtgt 176  Q
    |||||||||||| |||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| ||    ||||||||  ||||||||    
T  10160025 ttattcagtacagaaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttccccccaaatatttcagattgtgt 10159926  T
Q  177 tccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    ||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| ||||||    
T  10159925 tccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaa 10159868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 24285865 - 24285798
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24285865 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 24285798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 24292542 - 24292475
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24292542 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 24292475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 17327849 - 17327963
Alignment:
Q  111 caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattt 210  Q
    |||||||||||| || |||| ||||||||||||||||||| | |||||||||||||  |||| |||||||||||||| |||||| ||||| |||||||||    
T  17327849 caaaatatattttagatcaagcactaaaatatattagattgcataccaaaatatttcagattctgttccaaaatattttagattgcgttcaaaaatattt 17327948  T
Q  211 tagcaaaacatgggg 225  Q
    ||| ||||| |||||    
T  17327949 tagtaaaacttgggg 17327963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 22845192 - 22845310
Alignment:
Q  101 tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttc 200  Q
    |||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||| ||||| |||  ||||||||||||||||||| || |||  |||     
T  22845192 tattatgtaccaaaatatatttcagatcaaactctaaaatatattagatttcctactaaaatttttcagattgtgttccaaaatattctacattgtgttt 22845291  T
Q  201 taaaatattttagcaaaac 219  Q
     ||||||||||||||||||    
T  22845292 caaaatattttagcaaaac 22845310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 26897391 - 26897491
Alignment:
Q  66 agtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaata 163  Q
    |||||| |||| | |||||||||||||||||||  ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  26897391 agtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaata 26897490  T
Q  164 t 164  Q
    |    
T  26897491 t 26897491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 366 - 486
Target Start/End: Original strand, 5013852 - 5013972
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| ||||| |||||||| ||| ||||||||  | | |||||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  5013852 accttggaataaacaccttctcaccgatattagaaccagatattacccgtccttcgagcacaaattttcccatctttgtaattatcaatctcgtaccgtt 5013951  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  5013952 acataagcccaaactttgatc 5013972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 26902932 - 26903018
Alignment:
Q  80 ttattcagtacataaatat--attattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  26902932 ttattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 26903018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 42249351 - 42249418
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42249351 ctagcgcttacttcgttcacacaattatgtacccccattgtataatcttaggtcaaaaattggggtat 42249418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 9785895 - 9786040
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| ||||   |||||||||||| ||||||||||||  ||||||||||||||||||   ||  ||||||||    
T  9785895 attgagtactaaaatatattatattaagtacaaaaatacattattcagtacagaaatatattattaagtatcaaaatatatttcaaagcatgcactaaaa 9785994  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaata 185  Q
    ||||||||||| | |||||||||||||  ||||||||| |||||||    
T  9785995 tatattagattgcataccaaaatatttcagattgtgttgcaaaata 9786040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 42248991 - 42249092
Alignment:
Q  66 agtacataaatttgttattca-gtacataaatat--attattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaat 162  Q
    |||||| |||| | ||||||| ||||||||||||  ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  42248991 agtacaaaaatatattattcaagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaat 42249090  T
Q  163 at 164  Q
    ||    
T  42249091 at 42249092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 34070507 - 34070567
Alignment:
Q  301 cttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34070507 cttacttcgttcacacaattatgtacccc-attatataatcttaggtcaaaaattggggtat 34070567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 26903230 - 26903293
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggg 358  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  26903230 ctagtgcttacttcgttcacacacttatgtacccctattatatattcttaggtcaaaaattggg 26903293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 1512588 - 1512468
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| |||   |||||||| ||| ||||||||  | | || ||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  1512588 accttggaataaacaccttctcaatgatattagaaccagatattacccgtccttcaagcacaaattttcccatctttgtaatgatcaatctcgtaccgtt 1512489  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  1512488 acataagcccaaactttgatc 1512468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 6297200 - 6297093
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||||| |||| ||||||||||| | ||||||||||||||||||| |||   |||||||||| ||||||| | | |||||||||| | ||||| |||||    
T  6297200 ttattcaatacagaaatatattatcgagtatcaaaatatatttcagatcatgtactaaaatattttagattgcgttccaaaatattctagattgcgttcc 6297101  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  6297100 aaaatatt 6297093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 6857319 - 6857386
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    |||||||||||||  |||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  6857319 ctagtgcttacttaattcacacaattatgcacccccattatatagtcttaggtaaaaaattggggtat 6857386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 30658985 - 30659086
Alignment:
Q  133 actaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaaga 232  Q
    |||||||||||||||||| ||| || ||||||||  ||||    |||||||||||||||||| ||||| ||| |||||||||||||| ||||||| ||||    
T  30658985 actaaaatatattagattgccttcccaaatatttcagattaaaatccaaaatattatagattgcgttccaaattattttagcaaaacttggggactaaga 30659084  T
Q  233 aa 234  Q
    ||    
T  30659085 aa 30659086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 9785885 - 9785964
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||| ||||| ||||||| |||| | ||||| ||||    
T  9785885 aaatatctcaattgagtactaaaatatattatattaagtacaaaaatacattattcagtacagaaatatattattaagta 9785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 13290863 - 13290744
Alignment:
Q  106 tgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaa 205  Q
    |||| ||||||||||||||| ||||  || |||||||||||  || | |||||||||||||  |||||||| | ||||||||  ||||||  ||| ||||    
T  13290863 tgtaccaaaatatatttcagatcaagtaccaaaatatatta--ttacataccaaaatatttcagattgtgtactaaaatatttcagattatattccaaaa 13290766  T
Q  206 tattttagcaaaacatggggac 227  Q
    |||||| |||||||||||||||    
T  13290765 tattttggcaaaacatggggac 13290744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 30635587 - 30635701
Alignment:
Q  101 tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttc 200  Q
    |||| |||| |||| |||||||||| |||| || |||||||  ||||||| | ||| |||||||||  |||||||||| |||||||| |||||| | |||    
T  30635587 tattatgtaccaaattatatttcagatcaagcagtaaaatacgttagattgcgtactaaaatatttcagattgtgttctaaaatattctagattgctttc 30635686  T
Q  201 taaaatattttagca 215  Q
     ||||||||||||||    
T  30635687 aaaaatattttagca 30635701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 22845138 - 22845188
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatata 59  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  22845138 aaaatatctcaattgagtaccaaaatatattatattgagtacaaaaatata 22845188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 26897485 - 26897531
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  26897485 aaaatatatcatattgagtacaaaaatatattattcagtacataaat 26897531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 42248954 - 42249008
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  42248954 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatatattat 42249008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 30629604 - 30629698
Alignment:
Q  81 tattcagtacataaatatattat--tgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattg 173  Q
    |||| |||||| |||||||||||  | |||| |||||||||||| || ||||  || |||||||| |||||| | ||||||||||||||||||||    
T  30629604 tattgagtacaaaaatatattatattatgtaccaaaatatattttagatcaactacaaaaatatagtagattgcataccaaaatattttggattg 30629698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 1284259 - 1284317
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||| ||| ||||||| ||||    
T  1284259 caattgagtaccaaaatatattatattaagtacaaaaatatactattcagtacaaaaat 1284317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 6297144 - 6297066
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt-agcaaaacatggggacaaagaaaa 235  Q
    |||||||||| ||||| ||||||||||||| |||||| ||||| |||||||||| || ||||| |||| || |||||||    
T  6297144 aaaatattttagattgcgttccaaaatattctagattgcgttccaaaatattttcagtaaaacttgggaactaagaaaa 6297066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 26897354 - 26897408
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||| |||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  26897354 aaaatatgccaattatctaccaaaatatatcatattgagtacaaaaatatattat 26897408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 30344274 - 30344216
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  30344274 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 30344216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 3238680 - 3238614
Alignment:
Q  144 ttagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattt 210  Q
    ||||||| | |||||||||||||  |||||||| ||||||||||  |||||| |||| |||||||||    
T  3238680 ttagattgcgtaccaaaatatttatgattgtgtaccaaaatatttcagattatgttccaaaatattt 3238614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 30658929 - 30658975
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    ||||||||| |||||||||| ||||||||||||| ||||||| ||||    
T  30658929 aaaatatatcatattgagtataaaaatatattattcagtacagaaat 30658975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 30629727 - 30629784
Alignment:
Q  178 ccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||||  |||||||| || |||||||||||||||||  ||||||| |||||||    
T  30629727 ccaaaatatttcagattacgatccaaaatattttagcaaaatttggggactaagaaaa 30629784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 35602519 - 35602567
Alignment:
Q  178 ccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||||    
T  35602519 ccaaaatattatagattgcgttccaaa-tattttagcaaaacttggggac 35602567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 162; Significance: 3e-86; HSPs: 4)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 3714 - 3482
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgt 106  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  |||||     
T  3714 aaaatatgccaattgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 3615  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaat 206  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| |||||| |||||||| ||    
T  3614 gtatcaaaatatatttcagatcaaacactaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgcgttctaagat 3515  T
Q  207 attttagcaaaacatggggacaaagaaaagcac 239  Q
    ||||||||||||||||| |||||||||||||||    
T  3514 attttagcaaaacatggagacaaagaaaagcac 3482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 13014 - 12943
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  13014 ctagtgcttactttgttcacacaattatgtacccccattatatgatcttaggtaaaaaattggggtatgaca 12943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 3425 - 3354
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  3425 ctagtgcttacctcgttcacataattatgtactcccattatataatcttaggtcaaaaattagggtatgaca 3354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 13135 - 13074
Alignment:
Q  174 tgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||| | || |||||| |||||||||||||||||||||||||||| |||||||||||    
T  13135 tgttccaaattnttctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaa 13074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 3e-83; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 19097135 - 19097346
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||  ||||||||||||||||||| |    
T  19097135 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattcagtatcaaaatatatttcagat 19097234  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||    
T  19097235 caaacactaaaatatattagattgcctatcaaaatattttggattgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagac 19097334  T
Q  228 aaagaaaagcac 239  Q
    ||||||||||||    
T  19097335 aaagaaaagcac 19097346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 8954634 - 8954399
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgt 106  Q
    |||||||  |||||| |||| ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||  |||||     
T  8954634 aaaatatgtcaattgagtaccaaaatatatcatattgagtacaaaaatatattatttagtacataaatatgttattcagtacataaatatatattattga 8954535  T
Q  107 gtatcaaaatatat--ttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaa 204  Q
    ||||||||||||||  ||||| |||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  ||||||||    
T  8954534 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgtgttctaaa 8954435  T
Q  205 atattttag-caaaacatggggacaaagaaaagcac 239  Q
    ||||||||| |||||||||| |||||||||||||||    
T  8954434 atattttagccaaaacatggagacaaagaaaagcac 8954399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 36477697 - 36477926
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||  ||||||| |||||||||||||||||||||||    
T  36477697 aaaatatcacaattgtgtaccaaaatatatcatattgagtacaaaaatatattatgcaatacacaaacatgttatttagtacataaatatattattgtgt 36477796  T
Q  109 atc---aaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaa 205  Q
    |||   |||||||||||||| |||| ||||||||||||||||||| | | |||||||||||| ||||||||||||||||||| |||||| |||||||||     
T  36477797 atcaaaaaaatatatttcagatcaagcactaaaatatattagattgcatgccaaaatattttagattgtgttccaaaatattctagattgcgttctaaag 36477896  T
Q  206 tattttagcaaaacatggggacaaagaaaa 235  Q
    || ||||||||||| |||||  ||||||||    
T  36477897 taatttagcaaaacttgggggaaaagaaaa 36477926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 27 - 235
Target Start/End: Complemental strand, 853246 - 853034
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatatta--tgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatattt 122  Q
    |||||||||||||| ||||  ||| ||||||||| |  |  |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||||    
T  853246 actaaaatatattagattgcctaccaaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatattt 853147  T
Q  123 caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatg 222  Q
    ||| |||| || |||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  853146 cagatcaagcattaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgtgttctaaaatattttagcaaaacatg 853047  T
Q  223 gggacaaagaaaa 235  Q
    | || ||||||||    
T  853046 gagataaagaaaa 853034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 27 - 235
Target Start/End: Complemental strand, 1211250 - 1211038
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatatta--tgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatattt 122  Q
    |||||||||||||| ||||  ||| ||||||||| |  |  |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||||    
T  1211250 actaaaatatattagattgcctaccaaaatatatcaaattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatattt 1211151  T
Q  123 caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatg 222  Q
    ||| |||| || |||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  1211150 cagatcaagcattaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgtgttctaaaatattttagcaaaacatg 1211051  T
Q  223 gggacaaagaaaa 235  Q
    | || ||||||||    
T  1211050 gagataaagaaaa 1211038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 11017440 - 11017228
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattat--tgt 106  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||||||||      | ||| |||   |||| |||||| |||||||||||  | |    
T  11017440 aaaatatctcaattgagtactaaaatatattatattgagtaccaaaatatatta------aaatatatta--tattgagtacaaaaatatattatattat 11017349  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaat 206  Q
    ||| ||||||||||||||  |||| ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||||||||||| |||||    
T  11017348 gtaccaaaatatatttcatatcaagcactaaaatatattagattgcctaccaaaatatttcagattgtgttccaaaatattctagattacgttccaaaat 11017249  T
Q  207 attttagcaaaacatggggac 227  Q
    ||||||||||||| |||||||    
T  11017248 attttagcaaaacttggggac 11017228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 838688 - 838497
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtca 129  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||              ||| ||||||||||| ||||||||||||||||||| |||    
T  838688 aaaatatatcaaattgagtacaaaaatatattattcagtacataaat--------------atatatatattattgagtatcaaaatatatttcagatca 838603  T
Q  130 aacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaa 229  Q
    |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  |||| |||||||||||||||||||||| |||||    
T  838602 aacattaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgtgttccaaaatattttagcaaaacatggagacaa 838503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 1203868 - 1203677
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtca 129  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||              ||| ||||||||||| ||||||||||||||||||| |||    
T  1203868 aaaatatatcaaattgagtacaaaaatatattattcagtacataaat--------------atatatatattattgagtatcaaaatatatttcagatca 1203783  T
Q  130 aacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaa 229  Q
    |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  |||| |||||||||||||||||||||| |||||    
T  1203782 aacattaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgtgttccaaaatattttagcaaaacatggagacaa 1203683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 845844 - 845653
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtca 129  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||              ||| ||||||||||| ||||||||||||||||||| |||    
T  845844 aaaatatatcaaattgagtacaaaaatatattattcagtacataaat--------------atatatatattattgagtatcaaaatatatttcagatca 845759  T
Q  130 aacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaa 229  Q
    | || |||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||| || ||    
T  845758 agcattaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgtgttctaaaatattttagcaaaacatggagataa 845659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 19096982 - 19097141
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    |||||||| |||||| |||  ||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||  |||||||||||     
T  19096982 aaaatatctcaattgagtatcaaaatatatcatattgagtacaaaaatatactattcagtacataaatatgttattcagtacataaatatatattattga 19097081  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  19097082 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 19097141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 47102303 - 47102472
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||| ||||||||||  |||   |||||||||||||||||| |||||  |||||||    
T  47102303 agtacaaaaatatattattcagtacagaaatatattattgagtatcaatatatatttcaaatcatgtactaaaatatattagattgcctactcaaatatt 47102402  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| |||||||||||||||||  ||| ||| |||||||    
T  47102403 tcagattgtgttccaaaatattctagattgcgttccaaaatattttagcaaaatttggagactaagaaaa 47102472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 845964 - 845838
Alignment:
Q  42 attgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaa--atatatttcaggtcaaacactaa 137  Q
    |||||||||||||||||||||| |||||||||||| |||||||  ||||||||||  ||||||||| ||||||||  ||||||||||| |||| ||||||    
T  845964 attgagtacaaaaatatattattcagtacataaatatgttatttggtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaa 845865  T
Q  138 aatatattagatttcctaccaaaatat 164  Q
    ||||||||||||| |||||||||||||    
T  845864 aatatattagattgcctaccaaaatat 845838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 853341 - 853215
Alignment:
Q  42 attgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaa--atatatttcaggtcaaacactaa 137  Q
    |||||||||||||||||||||| |||||||||||| |||||||  ||||||||||  ||||||||| ||||||||  ||||||||||| |||| ||||||    
T  853341 attgagtacaaaaatatattattcagtacataaatatgttatttggtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaa 853242  T
Q  138 aatatattagatttcctaccaaaatat 164  Q
    ||||||||||||| |||||||||||||    
T  853241 aatatattagattgcctaccaaaatat 853215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 1211345 - 1211219
Alignment:
Q  42 attgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaa--atatatttcaggtcaaacactaa 137  Q
    |||||||||||||||||||||| |||||||||||| |||||||  ||||||||||  ||||||||| ||||||||  ||||||||||| |||| ||||||    
T  1211345 attgagtacaaaaatatattattcagtacataaatatgttatttggtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaa 1211246  T
Q  138 aatatattagatttcctaccaaaatat 164  Q
    ||||||||||||| |||||||||||||    
T  1211245 aatatattagattgcctaccaaaatat 1211219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 9650265 - 9650122
Alignment:
Q  81 tattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcca 180  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||   |||||||| ||||||||| |||||| ||||||||   |||||||||||    
T  9650265 tattcagtacataaatatattactgagtatcaaaatatatttcagatcatgtactaaaatttattagattgcctacccaaatatttcaaattgtgttcca 9650166  T
Q  181 aaatattatagattacgttctaaaatattttagcaaaacatggg 224  Q
    ||||||| |||||| |  || |||||||||||||||||| ||||    
T  9650165 aaatattctagattgcaatccaaaatattttagcaaaacttggg 9650122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 16580976 - 16581123
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||   ||  ||||||||    
T  16580976 attgagtactaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcaaagcatgcactaaaa 16581075  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  16581076 tatattagattgcctaccaaaatatttcagattgtgttgcaaaatatt 16581123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 19641087 - 19641227
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||||||| |||||||||||||  |||||||||||||||||| |||  |||||||||||||| |||| |||||||||| ||||  ||||||||||     
T  19641087 ttattcagtacagaaatatattattgaatatcaaaatatatttcagatcatgcactaaaatatattggattgcctaccaaaacatttcagattgtgttct 19641186  T
Q  180 aaaatattatagattacgttctaaaata-ttttagcaaaac 219  Q
     ||||||| ||||||||| || |||||| ||||||||||||    
T  19641187 gaaatattctagattacgctccaaaatatttttagcaaaac 19641227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 8954343 - 8954272
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8954343 ctagtgcttacttcgttcacacaattatgtacccccattatatgatcttaggtcaaaaattggggtatgaca 8954272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 9008889 - 9009061
Alignment:
Q  48 tacaaaaatatattat--gcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatatt 145  Q
    ||||||||||||||||  | |||||| |||| | |||||||||| | |||||||||||||  |||||||||||||||| | | |  || |||||||||||    
T  9008889 tacaaaaatatattatatggagtacaaaaatatattattcagtaaagaaatatattattgactatcaaaatatatttctgattatgcattaaaatatatt 9008988  T
Q  146 agatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaac 219  Q
    ||||| | |||||||||||||| ||||||||| | ||||||||||||||  |||| ||||||||||||| ||||    
T  9008989 agattgcttaccaaaatattttagattgtgtt-ctaaatattatagattgtgttccaaaatattttagctaaac 9009061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 14927999 - 14927836
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatattt 122  Q
    |||||||||||| | | ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||| ||    
T  14927999 gtactaaaatatctca-attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatagtt 14927901  T
Q  123 caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||   ||  ||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  14927900 caaagcatgcactaaaatatattagattgcctaccaaaatatttcagattgtgttgcaaaatatt 14927836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 14259744 - 14259887
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||   ||  ||||||||    
T  14259744 attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcaaagcatgcactaaaa 14259843  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaa 183  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||    
T  14259844 tatattagattgcctaccaaaatatttcagattgtgttgcaaaa 14259887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 845593 - 845522
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  845593 ctagtgcttacttcgttcacacaactatgtacccccattatatgatcttaggtcaaaaattggggtatgaca 845522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 852974 - 852903
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  852974 ctagtgcttacttcgttcacacaactatgtacccccattatatgatcttaggtcaaaaattggggtatgaca 852903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 1210978 - 1210907
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  1210978 ctagtgcttacttcgttcacacaactatgtacccccattatatgatcttaggtcaaaaattggggtatgaca 1210907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 19097402 - 19097474
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgacac 367  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  19097402 ctagtgcttacttcgttcacacaattatgtacccccattatatgatcttaggtcaaaaattgagatatgacac 19097474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 15351465 - 15351302
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatattt 122  Q
    |||||||||||| | | ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||| ||    
T  15351465 gtactaaaatatctca-attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatagtt 15351367  T
Q  123 caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||   ||  ||||||||||||||| ||| |||| ||||||||||  ||||||||| |||||||||    
T  15351366 caaagcatgcactaaaatatattaaattgcctaacaaaatatttcagattgtgttgcaaaatatt 15351302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 29727158 - 29727070
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat 98  Q
    |||||||  |||||| |||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  29727158 aaaatatttcaattgagtaccaaaatatattatattgagtacaaaaatatattattca-tacataaatatgttattcagtacataaatat 29727070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 838437 - 838374
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggg 358  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  838437 ctagtgcttacttcgttcacacaactatgtacccccattatatgatcttaggtcaaaaattggg 838374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 1203617 - 1203554
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggg 358  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  1203617 ctagtgcttacttcgttcacacaactatgtacccccattatatgatcttaggtcaaaaattggg 1203554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 838784 - 838682
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatat--ttcaggtcaaacactaaaatatattagatttcctaccaaaa 161  Q
    |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||  ||||| |||| ||||||||||||||||||| ||||||||||    
T  838784 agtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaa 838685  T
Q  162 tat 164  Q
    |||    
T  838684 tat 838682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 1203964 - 1203862
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatat--ttcaggtcaaacactaaaatatattagatttcctaccaaaa 161  Q
    |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||  ||||| |||| ||||||||||||||||||| ||||||||||    
T  1203964 agtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaa 1203865  T
Q  162 tat 164  Q
    |||    
T  1203864 tat 1203862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 16459701 - 16459585
Alignment:
Q  67 gtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattt 166  Q
    ||||| |||| | |||||||||||  ||||||||||||| |||||||| |||||||||   ||  ||||||||||||||||||| |||||||||||||||    
T  16459701 gtacaaaaatatattattcagtactgaaatatattattgagtatcaaagtatatttcaaagcatgcactaaaatatattagattgcctaccaaaatattt 16459602  T
Q  167 tggattgtgttccaaaa 183  Q
      ||||||||| |||||    
T  16459601 cagattgtgttgcaaaa 16459585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 47552191 - 47552057
Alignment:
Q  81 tattcagtacataaatatattattgtgtat--caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttc 178  Q
    |||| |||||| |||||||||||  | |||  ||||||||||||||| |   |||| ||||||||||||||| | || |||||||||||  |||||||||    
T  47552191 tattaagtacaaaaatatattatgttatataccaaaatatatttcagattgtacaccaaaatatattagattgcatatcaaaatattttaaattgtgttc 47552092  T
Q  179 caaaatattatagattacgttctaaaatattttag 213  Q
    ||||||||| |||||||| ||| ||||||||||||    
T  47552091 caaaatattttagattactttccaaaatattttag 47552057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 32302587 - 32302728
Alignment:
Q  44 tgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaata 141  Q
    ||||||| ||||||||||||    |||||| |||| | ||||||||| || ||||||||||||| ||||||||||||||||||   ||   |||||||||    
T  32302587 tgagtaccaaaatatattatattaagtacaaaaatatattattcagtgcagaaatatattattgagtatcaaaatatatttcaaagcatgtactaaaata 32302686  T
Q  142 tattagatttcctaccaaaatattttggattgtgttccaaaa 183  Q
    ||||||||| |||||||||||||||   |||||||| |||||    
T  32302687 tattagattgcctaccaaaatatttcatattgtgttacaaaa 32302728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 27257011 - 27257132
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| |||||||||||||||||| ||||||||||||||||||| |||   |||||||||| |||||||   | | ||||||||    
T  27257011 agtacaaaaatatattattcaatacataaatatattattgagtatcaaaatatatttcagatcatgtactaaaatattttagattgggttctaaaatatt 27257110  T
Q  166 ttggattgtgttccaaaatatt 187  Q
     | ||||| |||||||||||||    
T  27257111 ctagattgcgttccaaaatatt 27257132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 45115644 - 45115524
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||| | |||||| ||||| |||||||| ||  ||||||||  | | |||||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  45115644 accttggaatcaacaccttctcaccgatattagaacctgatattacccgtccttcgagcacaaattttcccatctttgtaatgatcaatctcgtaccgtt 45115545  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||| ||| |||||||    
T  45115544 acataagcctaaactttgatc 45115524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 15351460 - 15351380
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    |||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| |||| | ||||| ||||    
T  15351460 aaaatatctcaattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagta 15351380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 26168658 - 26168538
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| || ||| ||| | |||||||| ||| ||||||||  | | |||||||| ||||| ||||| |||||||| ||| |||| ||||| ||    
T  26168658 accttggaataaacatcttctcaacgatattagaaccagatattacccgttcttcgagcacgaattttcccatctttgtaatgatcaatctcgtaccatt 26168559  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  26168558 acataagcccaaactttgatc 26168538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 10488622 - 10488467
Alignment:
Q  81 tattcagtacataaatatatt-attgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||| |||||| ||||||||| ||| |||| ||||||||||||||| ||||  || ||||||||||| ||| | |  ||||||||||   ||||||  ||    
T  10488622 tattgagtacaaaaatatatttattatgtaccaaaatatatttcagatcaagtaccaaaatatattacattgcattacaaaatatttcatattgtgcacc 10488523  T
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||| ||||  |||||  ||||||| ||||||||||||||| ||||||| |||||||    
T  10488522 aaagtatttcagattgtgttctaagatattttagcaaaacttggggactaagaaaa 10488467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 8076825 - 8076906
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattag 147  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||| ||||||||||| |||   |||||||||||||||    
T  8076825 agtacaaaaatatattattcagtacagaaatatattattgagtatcaatatatatttcagatcatgtactaaaatatattag 8076906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 18426672 - 18426730
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  18426672 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 18426730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20485332 - 20485390
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  20485332 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaat 20485390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20488693 - 20488751
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  20488693 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaat 20488751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 27257081 - 27257159
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt-agcaaaacatggggacaaagaaaa 235  Q
    |||||||||| ||||| |||| |||||||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||    
T  27257081 aaaatattttagattgggttctaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 27257159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 1044064 - 1044147
Alignment:
Q  136 aaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaac 219  Q
    ||||||||||||||| | |||||||||||||| |||||||    ||||||||  ||||| ||||| |||||||||||| |||||    
T  1044064 aaaatatattagattgcataccaaaatattttagattgtgcatgaaaatatttcagattgcgttccaaaatattttagtaaaac 1044147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 8076809 - 8076868
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||||| |||||||||||||||||||||||| ||||||| |||| | ||||| ||||    
T  8076809 aaaatatatcatattgagtacaaaaatatattattcagtacagaaatatattattgagta 8076868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 11289277 - 11289178
Alignment:
Q  136 aaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||||||||| | || ||||||||||  | |||||| |||||||  |||| |||  |||  |||||||||||||||||| ||||||| |||||||    
T  11289277 aaaatatattagattgcatatcaaaatatttcagtttgtgtaccaaaatgatatatattgtgtttcaaaatattttagcaaaacttggggactaagaaaa 11289178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 13346613 - 13346510
Alignment:
Q  132 cactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaa-tattatagattacgttctaaaatattttagcaaaacatggggacaaa 230  Q
    ||||||||||||||||||| | |||||||||||||  ||||||| ||||||| |||| || |||  |||  |||||||||||||||| | ||| ||| ||    
T  13346613 cactaaaatatattagattgcataccaaaatatttcagattgtggtccaaaattattctaaattgtgtttcaaaatattttagcaaatcttggagactaa 13346514  T
Q  231 gaaa 234  Q
    ||||    
T  13346513 gaaa 13346510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 27256995 - 27257054
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| | ||||| ||||    
T  27256995 aaaatatatcatattgagtacaaaaatatattattcaatacataaatatattattgagta 27257054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 27257239 - 27257278
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  27257239 ctagtgcttacttcgttcacataattatgtacccccatta 27257278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 40864473 - 40864434
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  40864473 ctagtgcttacttcgttcacataattatgtacccccatta 40864434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 15573903 - 15573985
Alignment:
Q  136 aaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaa 218  Q
    ||||||||||||||| |  ||||||||||||| |||||||    |||||||| || |||| |||| |||||||||||||||||    
T  15573903 aaaatatattagattgcaaaccaaaatattttcgattgtgcaaaaaaatattttatattatgttccaaaatattttagcaaaa 15573985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 40864674 - 40864581
Alignment:
Q  93 aaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||||| ||||||||||||||||||| |||   |||||||||| ||||||| | |  | ||||||| | ||||| |||||||||||||    
T  40864674 aaatatattattgagtatcaaaatatatttcagatcatgtactaaaatattttagattgcgt-tctaaatattctagattgcgttccaaaatatt 40864581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 40998081 - 40997976
Alignment:
Q  81 tattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcca 180  Q
    |||| |||||| |||||||||| || | |||||||||||||| || | ||| ||| ||||||||| |||| | |||||||||||||  ||||  ||||||    
T  40998081 tattgagtacaaaaatatattactgag-atcaaaatatattttagattaaatacttaaatatattcgattgcataccaaaatatttcagatttcgttcca 40997983  T
Q  181 aaatatt 187  Q
    |||||||    
T  40997982 aaatatt 40997976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 43520313 - 43520243
Alignment:
Q  117 atatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||| ||||| || | ||||| ||||||| |  |||||||||||| ||||||||||||||||||||    
T  43520313 atatttcagatcaaataccataatattttagattgcgaaccaaaatatttcggattgtgttccaaaatatt 43520243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 11289387 - 11289354
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||||||||||||||||||||||||||||    
T  11289387 aaaatatattatattgagtacaaaaatatattat 11289354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 16459735 - 16459678
Alignment:
Q  13 tatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtac 70  Q
    |||| |||||| |||| |||||||||||||||  ||||||||||||||||| ||||||    
T  16459735 tatctcaattgagtaccaaaatatattatattaggtacaaaaatatattattcagtac 16459678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 23866651 - 23866723
Alignment:
Q  93 aaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    ||||||||||||| |||||||||||||| |||| | |   |||||||||||||||||| |||||  |||||||    
T  23866651 aaatatattattgagtatcaaaatatatctcagattatgtactaaaatatattagattgcctactcaaatatt 23866723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 32302590 - 32302654
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    |||| ||||||||||||||| |||||||||||||||||| |||| || |||| | ||||| ||||    
T  32302590 gtaccaaaatatattatattaagtacaaaaatatattattcagtgcagaaatatattattgagta 32302654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 45169280 - 45169236
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatatta 62  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  45169280 caattgagtaccaaaatatattatattaagtacaaaaatatatta 45169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 10499366 - 10499267
Alignment:
Q  136 aaaatatattagatttcctaccaaaatattttggattgtgttccaaaa-tattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    ||||||||||||||| |  | ||||||||||  ||||||||||||||| |||| || |||  |||| |||||||||||||||| | ||| ||| ||||||    
T  10499366 aaaatatattagattgcacatcaaaatatttcagattgtgttccaaaattattctaaattgtgttccaaaatattttagcaaagcttggagactaagaaa 10499267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 10504395 - 10504296
Alignment:
Q  136 aaaatatattagatttcctaccaaaatattttggattgtgttccaaaa-tattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    ||||||||||||||| |  | ||||||||||  ||||||||||||||| |||| || |||  |||| |||||||||||||||| | ||| ||| ||||||    
T  10504395 aaaatatattagattgcacatcaaaatatttcagattgtgttccaaaattattctaaattgtgttccaaaatattttagcaaagcttggagactaagaaa 10504296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 11247373 - 11247496
Alignment:
Q  112 aaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt 211  Q
    ||||||||||||||  |||  || ||| ||||||| ||| | |||||||||||||   ||||||  |||||||| | |||| | ||||| || |||||||    
T  11247373 aaaatatatttcagagcaagtaccaaagtatattatattgcataccaaaatatttcatattgtgcaccaaaataatttagactgcgttccaagatatttt 11247472  T
Q  212 agcaaaacatggggacaaagaaaa 235  Q
    |||||||| |||| || |||||||    
T  11247473 agcaaaacttgggtactaagaaaa 11247496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 15566163 - 15566246
Alignment:
Q  136 aaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaac 219  Q
    ||||||||||||||| | |||||||||||||   ||||||  ||||||||||  ||||| | ||| ||||||||||| ||||||    
T  15566163 aaaatatattagattgcataccaaaatatttcaaattgtgcaccaaaatatttcagattgcattccaaaatattttaacaaaac 15566246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 47552825 - 47552770
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatg 64  Q
    |||||||| |||||| |||| |||||||||||||| || ||||||| |||||||||    
T  47552825 aaaatatctcaattgagtaccaaaatatattatatcgaatacaaaattatattatg 47552770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 10488315 - 10488277
Alignment:
Q  197 gttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  10488315 gttctaaaatattttagcaaaacctggggactaagaaaa 10488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 10488644 - 10488602
Alignment:
Q  19 aattgtgtactaaaatatattatattgagtacaaaaatatatt 61  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||    
T  10488644 aattgagtaccaaaatatatcatattgagtacaaaaatatatt 10488602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 10499455 - 10499401
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||||||| |||||  |||| |||||||||||| ||||||| |||||||||||||    
T  10499455 aaaatatctcaattaagtaccaaaatatattatgttgagtaaaaaaatatattat 10499401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 10504484 - 10504430
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||||||| |||||  |||| |||||||||||| ||||||| |||||||||||||    
T  10504484 aaaatatctcaattaagtaccaaaatatattatgttgagtaaaaaaatatattat 10504430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 40864631 - 40864554
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt-agcaaaacatggggacaaagaaaa 235  Q
    |||||||||| ||||| |||| ||| |||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||    
T  40864631 aaaatattttagattgcgttctaaa-tattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 40864554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 47342393 - 47342355
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  47342393 gtaccaaaatatattatattgagtgcaaaaatatattat 47342355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 11247735 - 11247702
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    |||||| |||||||||||||||||||||||||||    
T  11247735 aaaatagattatattgagtacaaaaatatattat 11247702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 369
Target Start/End: Complemental strand, 23443626 - 23443597
Alignment:
Q  340 tcttaggtcaaaaattggggtatgacacct 369  Q
    ||||||||||||||||||||||||||||||    
T  23443626 tcttaggtcaaaaattggggtatgacacct 23443597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 40998089 - 40998060
Alignment:
Q  33 atatattatattgagtacaaaaatatatta 62  Q
    ||||||||||||||||||||||||||||||    
T  40998089 atatattatattgagtacaaaaatatatta 40998060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 1044042 - 1044074
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatatta 62  Q
    ||||||||||||||||||||| |||||||||||    
T  1044042 aaaatatattatattgagtaccaaaatatatta 1044074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 11288925 - 11288973
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaattt 78  Q
    ||||||||| ||||||||||||||| ||||||||  |||||| ||||||    
T  11288925 aaaatatatcatattgagtacaaaattatattattaagtacaaaaattt 11288973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 11289328 - 11289292
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatatt 61  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  11289328 gtaccaaaatatattatattgactacaaaaatatatt 11289292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 11296726 - 11296774
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaattt 78  Q
    ||||||||| ||||||||||||||| ||||||||  |||||| ||||||    
T  11296726 aaaatatatcatattgagtacaaaattatattattgagtacaaaaattt 11296774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 13343700 - 13343577
Alignment:
Q  111 caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaa-tattatagattacgttctaaaatatt 209  Q
    ||||||||||||||| |   |||||||||||||||||| | | |||||||||||||  |||||||  |||||| |||| || |||  |||  ||||||||    
T  13343700 caaaatatatttcagattgtacactaaaatatattaga-tgcataccaaaatatttcagattgtgacccaaaattattctaaattgtgtttcaaaatatt 13343602  T
Q  210 ttagcaaaacatggggacaaagaaa 234  Q
    |||||||| | ||| ||| ||||||    
T  13343601 ttagcaaatcttggagactaagaaa 13343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 15820497 - 15820469
Alignment:
Q  340 tcttaggtcaaaaattggggtatgacacc 368  Q
    |||||||||||||||||||||||||||||    
T  15820497 tcttaggtcaaaaattggggtatgacacc 15820469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 368
Target Start/End: Complemental strand, 37285993 - 37285965
Alignment:
Q  340 tcttaggtcaaaaattggggtatgacacc 368  Q
    |||||||||||||||||||||||||||||    
T  37285993 tcttaggtcaaaaattggggtatgacacc 37285965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 47102560 - 47102596
Alignment:
Q  298 gtgcttacttcgttcacacaattatgtacccccatta 334  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  47102560 gtgcttacttcgttcacataattatgtacccctatta 47102596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 154; Significance: 2e-81; HSPs: 2)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 593 - 803
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||    
T  593 aaaatatcccaattgagtactaaaatatattatattgagtacaaaaatatattatgcagt--------------------acataaatatattattgtgt 672  T
Q  109 atcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 208  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  673 atcaaaatatatttcaggtcaaacactaaaatatattagattacttaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 772  T
Q  209 tttagcaaaacatggggacaaagaaaagcac 239  Q
    |||||||||||||||||||||||||||||||    
T  773 tttagcaaaacatggggacaaagaaaagcac 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 295 - 493
Target Start/End: Original strand, 859 - 1057
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgacaccttggaataagcaccttttcacctata 394  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| |||||||||||||||||| ||||||||||||||||    
T  859 ctagtgtttacttcgttcacacaattatgtacccccattatataaccctaggttaaaaattgggatatgacaccttggaataaacaccttttcacctata 958  T
Q  395 ttagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttacataagcccaaattttgatctatggtc 493  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||| |||| | ||||||  |||||||||||||||||||||||||||||||    
T  959 ttagatccaaatattacctctgtctagagcacaaatttacccatatttgtaaaaatcaaacttgtattgttacataagcccaaattttgatctatggtc 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 7e-78; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 14073862 - 14074089
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    |||||||| ||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  14073862 aaaatatcacaattgtgtaccaaaatataccatattgagtacaaaaatatattatgcaatacataaatatgttattcagtgcataaatatattattgtgt 14073961  T
Q  109 atcaaaatata-tttcaggtcaaacactaaaatatattagatttcctaccaaaata-ttttggattgtgttccaaaatattatagattacgttctaaaat 206  Q
    ||||||||||| |||||| |||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| | |||||||||    
T  14073962 atcaaaatatattttcagatcaagcactaaaatatattagattgcctaccaaaatatttttagattgtgttccaaaatattatagattgcattctaaaat 14074061  T
Q  207 attttagcaaaacatggggacaaagaaa 234  Q
    | ||||||||||| ||||||| ||||||    
T  14074062 aatttagcaaaacttggggaccaagaaa 14074089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 18387670 - 18387866
Alignment:
Q  42 attgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaata 141  Q
    ||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  18387670 attgagtactaaaatatattatgcagtcaataaatatgttattcagtacataaatatattattgtctatcaaaatatgtttcagatcaaacactaaaata 18387769  T
Q  142 tattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaagcac 239  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18387770 tattagattgcctaccaaaatattttggattatgttccaaaata-tcttgattacgttctaaaatatcttagcaaaacatggggacaaagaaaagcac 18387866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 368 - 489
Target Start/End: Original strand, 25971326 - 25971447
Alignment:
Q  368 cttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttac 467  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  25971326 cttggaataaacaccttttcacctatattagatccagatattacctctgcctcgagcacaaatttacccatctttgtaataatcaatcttgtaccgttac 25971425  T
Q  468 ataagcccaaattttgatctat 489  Q
    ||||||||||||||||||||||    
T  25971426 ataagcccaaattttgatctat 25971447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 26981471 - 26981642
Alignment:
Q  66 agtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaata 163  Q
    |||||| |||| | |||||||||||||||||||  ||||||| |||||||||||||||| |  |||| || |||||||||||||||| |||| |||||||    
T  26981471 agtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatattttaaatcaaccattaaaatatattagattgcctatcaaaata 26981570  T
Q  164 ttttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  26981571 tttcggattgtgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaa 26981642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 368 - 489
Target Start/End: Original strand, 25975766 - 25975887
Alignment:
Q  368 cttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttac 467  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  25975766 cttggaataaacaccttttcacctatattagatccagatattacctctgcctcgagctcaaatttacccatctttgtaataatcaatcttgtaccgttac 25975865  T
Q  468 ataagcccaaattttgatctat 489  Q
    ||||||||||||||||||||||    
T  25975866 ataagcccaaattttgatctat 25975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 27073853 - 27074024
Alignment:
Q  66 agtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaata 163  Q
    |||||| |||| | |||||||||||||||||||  ||||||| |||||||||||||||| |  |||| || |||||||||||||||| |||| |||||||    
T  27073853 agtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatattttaaatcaaccattaaaatatattagattgcctatcaaaata 27073952  T
Q  164 ttttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  27073953 tttcggattatgttccaaaatattctagattgcgttctaaaatattttagcaaaacatggagacaaagaaaa 27074024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 16625143 - 16625302
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| || ||||||||| ||||||| |||||||||  |||||||||||     
T  16625143 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcaatacataaatatgttatttagtacataaatatatattattga 16625242  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||  |||||||||||||    
T  16625243 gtatcaaaatatatatttcagatcaagcactaaaatatattagatagcctaccaaaatat 16625302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 6112054 - 6111913
Alignment:
Q  95 atatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagatt 194  Q
    ||||||||||| ||||||||||||||||| | |||  |||||||||||||||||||  ||||||||||||||  ||||||||||||||||||| ||||||    
T  6112054 atatattattgagtatcaaaatatatttcggatcatgcactaaaatatattagattgtctaccaaaatatttcagattgtgttccaaaatattctagatt 6111955  T
Q  195 acgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
     |||||  ||||| |||||||||||| ||||||| |||||||    
T  6111954 gcgttccgaaatatttttagcaaaacttggggactaagaaaa 6111913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 18387922 - 18387994
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgacac 367  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18387922 ctagtgcttacttcgttcacacaattatgtacccacattatataatcttaggtcaaaaattggggtatgacac 18387994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 2077559 - 2077706
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| ||||   |||||||||||||||||||||||||  ||||||||||||||||||   ||  ||||||||    
T  2077559 attgagtactaaaatatattatattaagtacaaaaatacattattcagtacataaatatattattaagtatcaaaatatatttcaaagcatgcactaaaa 2077658  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  2077659 tatattagattgcctaccaaaatatttcagattgtgttgcaaaatatt 2077706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 14074149 - 14074216
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14074149 ctagtgcttacttcgctcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 14074216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 26981702 - 26981773
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||    
T  26981702 ctagtgcttacttcgttcacacaattatgtacccccattatacgatcttaggtcaaaagttggggtatgaca 26981773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 27074084 - 27074155
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  27074084 ctagtgcttacttcgttcacacaattatgtacccccattatacgatgttaggtcaaaaattggggtatgaca 27074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 19772376 - 19772259
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    ||||| ||||| | |||||||| ||||||||||||||||| |||||||||||||||||    ||  ||||||||||||||||||| |||| |||||||||    
T  19772376 agtacttaaatatattattcagcacataaatatattattgagtatcaaaatatatttctaagcatgcactaaaatatattagattgcctatcaaaatatt 19772277  T
Q  166 ttggattgtgttccaaaa 183  Q
    |  ||||||||| |||||    
T  19772276 tcagattgtgttgcaaaa 19772259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 15704258 - 15704132
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    | |||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||   ||  ||| ||||    
T  15704258 attgagtaccaaaatatattatattaaatacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcaaagcatccaccaaaa 15704159  T
Q  140 tatattagatttcctaccaaaatattt 166  Q
    ||||||||||| |||||||||||||||    
T  15704158 tatattagattgcctaccaaaatattt 15704132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 16625326 - 16625433
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||   ||  ||||||||||||||| ||| |||| ||||||||||  ||||||||| |    
T  16625326 ttatttagtacataaatatattattgagtatcaaaatatagttcaaagcatgcactaaaatatattatattgcctatcaaaatatttcagattgtgttgc 16625425  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  16625426 aaaatatt 16625433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 26981322 - 26981389
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  26981322 aaaatatctcaattgagtactaaaatatatcatattgagtacaaaaatatattattcaggacataaat 26981389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 27073742 - 27073843
Alignment:
Q  67 gtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatat--atttcaggtcaaacactaaaatatattagatttcctaccaaaat 162  Q
    ||||| |||| | |||||||||||||||||||  ||||||| ||||||||||||  ||||||| |||| |||||||||||| |||||| |||||||||||    
T  27073742 gtacaaaaatatattattcagtacataaatatgtattattgagtatcaaaatatatatttcagatcaagcactaaaatatactagattgcctaccaaaat 27073841  T
Q  163 at 164  Q
    ||    
T  27073842 at 27073843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 368 - 486
Target Start/End: Complemental strand, 2280758 - 2280640
Alignment:
Q  368 cttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttac 467  Q
    |||||||| | |||||| ||||| |||||||| ||  ||||||||  | | |||||||||||||| || || |||||||| ||| |||| ||||||||||    
T  2280758 cttggaatcaacaccttctcaccgatattagaacctgatattacccgtccttcgagcacaaattttcctatctttgtaatgatcaatctcgtaccgttac 2280659  T
Q  468 ataagcccaaattttgatc 486  Q
    ||||||||||| |||||||    
T  2280658 ataagcccaaactttgatc 2280640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 211
Target Start/End: Complemental strand, 2759475 - 2759365
Alignment:
Q  101 tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttc 200  Q
    |||| |||| |||||||||| |||| ||||| | |||| || ||||||||   |||||||||||||  |||||| ||||||||||||||||||| |||||    
T  2759475 tattatgtaccaaaatatatatcagatcaaaaattaaagtacattagattggataccaaaatatttcagattgttttccaaaatattatagattgcgttc 2759376  T
Q  201 taaaatatttt 211  Q
     ||||||||||    
T  2759375 aaaaatatttt 2759365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 26981333 - 26981461
Alignment:
Q  42 attgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatat--atttcaggtcaaacact 135  Q
    ||||||||| |||||||||  |||  |||||| |||| | |||||||| ||||||||||  ||||||| ||||||||||||  ||||||| |||| ||||    
T  26981333 attgagtactaaaatatatcatattgagtacaaaaatatattattcaggacataaatatgtattattgagtatcaaaatatatatttcagatcaagcact 26981432  T
Q  136 aaaatatattagatttcctaccaaaatat 164  Q
    |||||||| |||| | |||||||||||||    
T  26981433 aaaatatactagaatgcctaccaaaatat 26981461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 15645476 - 15645600
Alignment:
Q  95 atatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagatt 194  Q
    ||||||| || ||||  |||||||||||||| | ||  |||||| ||||||||| | | |||||||||||||| |||||||  ||||||||||  | |||    
T  15645476 atatattgttatgtacaaaaatatatttcagataaagtactaaagtatattagactgcataccaaaatattttagattgtgcaccaaaatatttcatatt 15645575  T
Q  195 acgttctaaaatattttagcaaaac 219  Q
     ||||| ||||||| ||||||||||    
T  15645576 gcgttccaaaatatcttagcaaaac 15645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 2759524 - 2759469
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatg 64  Q
    |||||||| |||||| |||| |||||||||||||||||||| ||||||||||||||    
T  2759524 aaaatatctcaattgagtaccaaaatatattatattgagtaaaaaaatatattatg 2759469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 15704268 - 15704189
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||| |||||| |||| ||||||||||||||| | |||||||||||||||| ||||||| |||| | ||||| ||||    
T  15704268 aaatatctcaattgagtaccaaaatatattatattaaatacaaaaatatattattcagtacagaaatatattattgagta 15704189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 16761128 - 16761186
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  16761128 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 16761186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 22807096 - 22807154
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  22807096 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 22807154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 217
Target Start/End: Complemental strand, 2759662 - 2759551
Alignment:
Q  101 tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttc 200  Q
    |||| |||| |||||||||| |||| ||||| ||||||||| ||||||||   ||     ||||||  |||||| ||||||||||||||||||| | |||    
T  2759662 tattatgtaccaaaatatatatcagatcaaaaactaaaatacattagattgaata-----atatttcagattgttttccaaaatattatagattgccttc 2759568  T
Q  201 taaaatattttagcaaa 217  Q
     ||||||||||||||||    
T  2759567 aaaaatattttagcaaa 2759551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 15641103 - 15641226
Alignment:
Q  112 aaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt 211  Q
    |||||||||||||| | ||  || |||||||||| |||| | |||||||||||||     ||||  ||||||||||  | ||||||||| ||||||||||    
T  15641103 aaaatatatttcagataaagtaccaaaatatattcgattgcataccaaaatatttcaatatgtgcaccaaaatatttcatattacgttccaaaatatttt 15641202  T
Q  212 agcaaaacatggggacaaagaaaa 235  Q
    |||||||| ||||||  |||||||    
T  15641203 agcaaaacttggggagtaagaaaa 15641226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 14322759 - 14322701
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||  |||||| ||||    
T  14322759 caattgagtaccaaaatatattatattaagtacaaaaatatattatctagtacaaaaat 14322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 15991030 - 15990977
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||||||| |||||| ||| ||||||||||||||||||||| |||||||||||||    
T  15991030 aaaatatctcaattgagtaataaaatatattatattgagta-aaaaatatattat 15990977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 22949968 - 22950026
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  22949968 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 22950026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 22953924 - 22953982
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  22953924 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 22953982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 23872412 - 23872470
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  23872412 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 23872470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 23876368 - 23876426
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  23876368 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 23876426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 27324410 - 27324352
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||| ||||||||||||| ||||||| ||||    
T  27324410 caattgagtaccaaaatatattatattaagtaaaaaaatatattattcagtacagaaat 27324352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 2862743 - 2862688
Alignment:
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||  ||||| |||||||||||||||||||||||| || |||| |||||||    
T  2862743 aaaatatttcagattgcgttctaaaatattttagcaaaacttgaggactaagaaaa 2862688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 6111806 - 6111767
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  6111806 ctagtgcttacttcgttcacttaattatgtacccccatta 6111767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 15641049 - 15641090
Alignment:
Q  20 attgtgtactaaaatatattatattgagtacaaaaatatatt 61  Q
    |||| |||| |||||||||||||||| |||||||||||||||    
T  15641049 attgagtacaaaaatatattatattgtgtacaaaaatatatt 15641090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 26981455 - 26981488
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||||| ||||||||||||||||||||||    
T  26981455 aaaatatattaaattgagtacaaaaatatattat 26981488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 15666305 - 15666333
Alignment:
Q  341 cttaggtcaaaaattggggtatgacacct 369  Q
    |||||||||||||||||||||||||||||    
T  15666305 cttaggtcaaaaattggggtatgacacct 15666333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 8770980 - 8771206
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    |||||||  ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||    
T  8770980 aaaatatttcaattgtgtacaaaaatatatcatattaagtacaaaaatatattattcagtacataaatatgttattcagtacataaatacattattgagt 8771079  T
Q  109 atcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 208  Q
    |||||||||||||| || |||| |||||||||| |||||||| |||||||||||||||  ||||||||||||||||||| ||| || |||||||||||||    
T  8771080 atcaaaatatattttagatcaagcactaaaatacattagattgcctaccaaaatatttcagattgtgttccaaaatattttagtttgcgttctaaaatat 8771179  T
Q  209 tttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||||| |||||||||||||||    
T  8771180 tttagcaaaacttggggacaaagaaaa 8771206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 41099408 - 41099609
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||| |    
T  41099408 aaaatatatcatattgagtacaaaaatatattattcaatacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 41099507  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  41099508 caaacactaaaatatattagattgcctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 41099607  T
Q  228 aa 229  Q
    ||    
T  41099608 aa 41099609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 30 - 235
Target Start/End: Original strand, 21827083 - 21827292
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatat--atttcag 125  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||  |||||||    
T  21827083 aaaatatattatattgagtacaaaaatatattatccagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatatttcag 21827182  T
Q  126 gtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatgggg 225  Q
     |||| || |||||||||||||||| |||| |||||||||| |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| |    
T  21827183 atcaagcagtaaaatatattagattgcctatcaaaatatttcggattgtgctccaaaatattctagattgcgttctaaaatattttagcaaaacatggag 21827282  T
Q  226 acaaagaaaa 235  Q
    ||| ||||||    
T  21827283 acagagaaaa 21827292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 368 - 489
Target Start/End: Original strand, 38095797 - 38095918
Alignment:
Q  368 cttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttac 467  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  38095797 cttggaataaacaccttttcacctatattagatccagatattacctctgcctcgagcacaaatttacccatctttgtaataatcaatcttgtaccgttac 38095896  T
Q  468 ataagcccaaattttgatctat 489  Q
    ||||||||||||||||||||||    
T  38095897 ataagcccaaattttgatctat 38095918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 23976922 - 23976733
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtca 129  Q
    ||||||||| |||||||||||||||||||||||| || ||||| ||| | ||||| |||||| ||||||||||||   |||||||||||||||||| |||    
T  23976922 aaaatatatcatattgagtacaaaaatatattattcaatacatgaatatattattgagtacaaaaatatattattaattatcaaaatatatttcagatca 23976823  T
Q  130 aacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaac 219  Q
      || |||||||||||||||| |||||||||||||||  ||||||||||||||||||| || ||| | ||| ||||||||||||||||||    
T  23976822 tgcagtaaaatatattagattacctaccaaaatatttcagattgtgttccaaaatattctaaattgcattccaaaatattttagcaaaac 23976733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 26869681 - 26869522
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||     
T  26869681 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 26869582  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  26869581 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 26869522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 41099257 - 41099414
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    |||||||  ||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||  |||||||||||     
T  41099257 aaaatatgtcaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttatccagtacataaatatatattattga 41099356  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||    
T  41099357 gtatcaaaatatatttcagatcaagtactaaaatatattagattgcctaccaaaatat 41099414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 36936831 - 36936662
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  36936831 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 36936732  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  36936731 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 36936662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 36941585 - 36941416
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  36941585 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 36941486  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  36941485 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 36941416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 13300821 - 13300641
Alignment:
Q  56 tatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    |||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| |||  ||||||||||||||||||| | ||    
T  13300821 tatattattcaatacatgaatatattattgactacaaaaatatattattgactatcaaaatatatttcagatcatgcactaaaatatattagattgctta 13300722  T
Q  156 ccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||||  |||||| |||||||||||| |||||| ||||| |||||| |||||||||||| ||||||| |||||||    
T  13300721 ccaaaatatttcagattgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 13300641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 557469 - 557637
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||| |||||||||||||| || |||||||||||||||| ||  ||   |||||||||||||||||| ||| || |||||||    
T  557469 agtacaaaaatatattattcagcacataaatatattactgagtatcaaaatatattttagagcatgtactaaaatatattagattgccttcccaaatatt 557568  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| ||||||    
T  557569 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaa 557637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 562255 - 562409
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||| |||||||||||||| || |||||||||||||||| ||  ||   |||||||||||||||||| ||| || ||||||||  |||||||||||    
T  562255 ttattcagcacataaatatattactgagtatcaaaatatattttagagcatgtactaaaatatattagattgccttcccaaatatttcagattgtgttcc 562354  T
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    |||||||| |||||| ||||| ||| |||||||||||||| ||||||| ||||||    
T  562355 aaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaa 562409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 12044438 - 12044284
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||||| |||| |||||||||| || ||||||||||||||||||| |||   |||||||||||||||||| ||| || ||||||||  |||| ||||||    
T  12044438 ttattcaatacagaaatatattactgagtatcaaaatatatttcagatcatgtactaaaatatattagattacctgcccaaatatttcagattatgttcc 12044339  T
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    |||||||| |||||| ||||| ||||||||||| |||||| ||||||| ||||||    
T  12044338 aaaatattctagattgcgttccaaaatattttaacaaaacttggggactaagaaa 12044284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 42002207 - 42002376
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||||||||||||||||||| || |||||||||||||||| || |||   ||||||||||||||||||  || || |||||||    
T  42002207 agtacaaaaatatattattcagtacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgtcttcccaaatatt 42002306  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||| ||||| ||||| | |||||||    
T  42002307 tcagattgtgttccaaaatattctagattgcgttccaaattattttagtaaaacttgggggctaagaaaa 42002376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 21827352 - 21827423
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21827352 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 21827423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 26869395 - 26869324
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26869395 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 26869324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 15395162 - 15395006
Alignment:
Q  81 tattcagtacataaatatattattgtgtat--caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttc 178  Q
    |||| |||||| |||||||||||| | | |  |||||||||||| || |||| |||||||||||||||||||   |||||||||||||  || |||||||    
T  15395162 tattgagtacaaaaatatattattttatttaccaaaatatattttagatcaagcactaaaatatattagattgtttaccaaaatatttcagactgtgttc 15395063  T
Q  179 caaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||| ||||||  ||||||||||||||||||||||| ||||||| |||||||    
T  15395062 caaaatattctagattgtgttctaaaatattttagcaaaacttggggactaagaaaa 15395006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 42 - 207
Target Start/End: Complemental strand, 1429522 - 1429355
Alignment:
Q  42 attgagtacaaaaatatattatgcag--tacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||   |  |||| |||| | ||||||| |||||||||||||||||| ||||||||||||||||||| | |  | |||| |    
T  1429522 attgagtaccaaaatatattatattgaatacaaaaatatattattcaatacataaatatattattgagtatcaaaatatatttcagataatgctctaaga 1429423  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata 207  Q
    ||||||||||| |||||||||||||||  |||| |||||||||||||| |||||| ||||| ||||||    
T  1429422 tatattagattccctaccaaaatatttcagattttgttccaaaatattctagattgcgttccaaaata 1429355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 81 - 234
Target Start/End: Original strand, 3666660 - 3666815
Alignment:
Q  81 tattcagtacataaatatattat--tgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttc 178  Q
    |||| |||||| |||||||||||  | |||| |||||||||||| || ||||  |||||||||||||||||| |||||| ||||||||  ||||||||||    
T  3666660 tattgagtacaaaaatatattatattatgtaccaaaatatattttagatcaagtactaaaatatattagattgcctacccaaatatttcagattgtgttc 3666759  T
Q  179 caaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    ||||||||| | |||| ||||| |||||||||||||||||| | ||||| ||||||    
T  3666760 caaaatattttcgattgcgttccaaaatattttagcaaaacttagggactaagaaa 3666815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 32460850 - 32460700
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||||| |||| ||||| ||||||| |||||||||||||||||| ||     | |||||||||||||||| |||||| ||||||||  |||||||||||    
T  32460850 ttattcaatacagaaataaattattgagtatcaaaatatatttcatgt-----attaaaatatattagattgcctacccaaatatttcagattgtgttcc 32460756  T
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |||||||| |||||| || || |||||||||||| ||||  ||||||| |||||||    
T  32460755 aaaatattctagattgcgctccaaaatattttaggaaaatttggggactaagaaaa 32460700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 41099673 - 41099736
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggg 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41099673 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggg 41099736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 227
Target Start/End: Original strand, 31732299 - 31732476
Alignment:
Q  56 tatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    |||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| |||  || |||||||||||||||| | ||    
T  31732299 tatattattcaatacatgaatatattattgactacagaaatatattattgactatcaaaatatatttcagatcatgcattaaaatatattagattgctta 31732398  T
Q  156 ccaaaatattt-----tggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggac 227  Q
    |||||||||||     || ||||| |||||||||||| |||||| ||||| |||||| |||||||||||| |||||||    
T  31732399 ccaaaatatttcagattgtattgtattccaaaatattgtagattgcgttccaaaatatttttagcaaaacttggggac 31732476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 427 - 493
Target Start/End: Complemental strand, 37609719 - 37609653
Alignment:
Q  427 aaatttacccatatttgtaataatcgatcttgtaccgttacataagcccaaattttgatctatggtc 493  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37609719 aaatttacccatctttgtaataatcaatcttgtaccgttacataagcccaaattttgatctatggtc 37609653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 21323340 - 21323219
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||  | |   |||||||||| ||||||| | | ||||||||||    
T  21323340 agtacaaaaatatattattcagtacataaatatattattgagtatcaaaatatatttcaaattatgtactaaaatattttagattgcgttccaaaatatt 21323241  T
Q  166 ttggattgtgttccaaaatatt 187  Q
     | ||||| |||||||||||||    
T  21323240 ctagattgcgttccaaaatatt 21323219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 41997438 - 41997559
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||||||||||||||||||| || |||||||||||||||| || |||   ||||||||||||||||||  || || |||||||    
T  41997438 agtacaaaaatatattattcagtacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgtcttcccaaatatt 41997537  T
Q  166 ttggattgtgttccaaaatatt 187  Q
    |  |||||||||||||| ||||    
T  41997538 tcagattgtgttccaaattatt 41997559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 21826961 - 21827089
Alignment:
Q  42 attgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatat--ttcaggtcaaacact 135  Q
    ||||||||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||  || || |||| ||||    
T  21826961 attgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatattttagatcaagcact 21827060  T
Q  136 aaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||| |||||||||||||    
T  21827061 aaaatatattagattgcctaccaaaatat 21827089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 21826950 - 21827017
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  21826950 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaat 21827017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 26869528 - 26869473
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattc 85  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  26869528 aaaatatatcatattgagtacaaaaatatattatccagtacataaatatgttattc 26869473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 431
Target Start/End: Original strand, 16679048 - 16679113
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatt 431  Q
    ||||| |||||| ||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||    
T  16679048 accttagaataaacaccttttcacttattttagatccagatattacctctgcctcgagcacaaatt 16679113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 2451758 - 2451820
Alignment:
Q  134 ctaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattac 196  Q
    ||||||||||||||||| ||||||||||||||    ||||||||| |||||||||||||||||    
T  2451758 ctaaaatatattagattgcctaccaaaatattacatattgtgttctaaaatattatagattac 2451820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 10755485 - 10755543
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  10755485 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 10755543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 21323270 - 21323192
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||| ||||| ||||||||||||| |||||| ||||| |||||| |||||||||||  ||||||| |||||||    
T  21323270 aaaatattttagattgcgttccaaaatattctagattgcgttccaaaatatttttagcaaaatttggggactaagaaaa 21323192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 41997422 - 41997468
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  41997422 aaaatatatcatattgagtacaaaaatatattattcagtacataaat 41997468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 366
Target Start/End: Complemental strand, 15394868 - 15394827
Alignment:
Q  325 acccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  15394868 acccccactatataatcttaggtcaaaaattggggtatgaca 15394827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 24435433 - 24435361
Alignment:
Q  134 ctaaaatatattagatttcctacca-aaatattttggattgtgttccaaaatattatagattacgttctaaaa 205  Q
    ||||||||||||||||| ||||| | ||||||||  ||||||||||||||||||| |||||| ||||| ||||    
T  24435433 ctaaaatatattagattgcctactagaaatatttcagattgtgttccaaaatattctagattgcgttccaaaa 24435361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 13300560 - 13300521
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  13300560 ctagtgcttacttcgttcacataattatgtacccccatta 13300521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 21323111 - 21323072
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  21323111 ctagtgcttacttcgttcacataattatgtacccccatta 21323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 3666644 - 3666682
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  3666644 gtacaaaaatatattatattgagtacaaaaatatattat 3666682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 36949521 - 36949575
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||  ||||| |||| |||||||||| |||||||||||||||||||||||    
T  36949521 aaaatatcttaattgagtaccaaaatatattttattgagtacaaaaatatattat 36949575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 15395172 - 15395140
Alignment:
Q  31 aaatatattatattgagtacaaaaatatattat 63  Q
    |||||||||||||||||||||||||||||||||    
T  15395172 aaatatattatattgagtacaaaaatatattat 15395140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 2451972 - 2452011
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  2451972 ctagtgcttacttcgttcacataattatgtacccctatta 2452011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 21323351 - 21323297
Alignment:
Q  35 atattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    |||||||||  |||||||||||||||||| |||||||||||| | ||||| ||||    
T  21323351 atattatatctagtacaaaaatatattattcagtacataaatatattattgagta 21323297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 557453 - 557486
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  557453 aaaatatatcatattgagtacaaaaatatattat 557486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 36936847 - 36936814
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  36936847 aaaatatatcatattgagtacaaaaatatattat 36936814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 36941601 - 36941568
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  36941601 aaaatatatcatattgagtacaaaaatatattat 36941568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 42002191 - 42002224
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  42002191 aaaatatatcatattgagtacaaaaatatattat 42002224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 3e-77; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 52100453 - 52100236
Alignment:
Q  20 attgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaata 117  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  52100453 attgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaata 52100354  T
Q  118 tatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaa 217  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  52100353 tatttcagatcaagcactaaaatatattagattttctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaa 52100254  T
Q  218 acatggggacaaagaaaa 235  Q
    || ||||||| |||||||    
T  52100253 acttggggaccaagaaaa 52100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 21498529 - 21498730
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||| |    
T  21498529 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 21498628  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  21498629 caagcactaaaatatattagattgcctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 21498728  T
Q  228 aa 229  Q
    ||    
T  21498729 aa 21498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 26199230 - 26199453
Alignment:
Q  20 attgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaata 117  Q
    |||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  26199230 attgagtacaaaaatatatcatattgagtacaaaaatatattatccagtacataaatatgttattcagtacataaatatatattattgagtatcaaaata 26199329  T
Q  118 t--atttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagca 215  Q
    |  ||||||| |||| || |||||||||||||||| |||| |||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  26199330 tatatttcagatcaagcagtaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattttagattgcgttctaaaatattttagca 26199429  T
Q  216 aaacatggggacaaagaaaagcac 239  Q
    |||||||| |||| ||||||||||    
T  26199430 aaacatggagacagagaaaagcac 26199453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 22428563 - 22428333
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgt 106  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||  |||||     
T  22428563 aaaatatcccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatcttattcagtacataaatatatattattga 22428464  T
Q  107 gtatcaaaatatat--ttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaa 204  Q
    ||||||||||||||  ||||| |||| || |||||||||||||||| |||| |||||||||| |||||||||||||||||||| |||||| |||| ||||    
T  22428463 gtatcaaaatatatatttcagatcaagcagtaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgcgttataaa 22428364  T
Q  205 atattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||||||||||| | |||||||||||    
T  22428363 atattttagcaaaacatcgagacaaagaaaa 22428333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 16836652 - 16836436
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgt 108  Q
    |||||||| |||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |    
T  16836652 aaaatatctcaattgagtaccaaaatatattatattgagtagaaaaatatattattcagtacataaatatgttattcagtacataaatatattattggtt 16836553  T
Q  109 atcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatat 208  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||||         |||||||||| |||||||| |||||| |||||||||||||    
T  16836552 atcaaaatatatttcagatcaaacactagaatatattagattgcctaccaa---------gattgtgttctaaaatattctagattgcgttctaaaatat 16836462  T
Q  209 tttagcaaaacatggggacaaagaaa 234  Q
    ||||||||||| ||||||||||||||    
T  16836461 tttagcaaaacttggggacaaagaaa 16836436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 2367770 - 2367998
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||  ||||||| |||     
T  2367770 aaaatatgccaattgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacatgaatatgttattcagtacataaatatatattcttga 2367869  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatag-attacgttctaaaa 205  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||| ||||||||| |||||| |||||||||||| ||| ||| ||||||||||    
T  2367870 gtatcaaaatatatttcagatcaagcactaaaatatattagattgcctacccaaatattttagattgtattccaaaatattctagaattgcgttctaaaa 2367969  T
Q  206 tattttagcaaaacatggggacaaagaaa 234  Q
    || ||||||||||| | ||||| ||||||    
T  2367970 taatttagcaaaactttgggaccaagaaa 2367998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 2384613 - 2384384
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgt 106  Q
    |||||||  ||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||  | |||     
T  2384613 aaaatatgtcaattgtttaccaaaatatatcatattgagtacaaaaatatattattcagtacatgaatatgttattcagtacataaatatatattcttga 2384514  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaa--tatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaa 204  Q
    ||||||||||||||||||| |||| ||| ||||  ||||||||||| |||||||||||||||| |||||| |||||||||||||||| || |||||||||    
T  2384513 gtatcaaaatatatttcagatcaagcacgaaaaaatatattagattgcctaccaaaatattttagattgtattccaaaatattatagtttgcgttctaaa 2384414  T
Q  205 atattttagcaaaacatggggacaaagaaa 234  Q
    ||| ||||||||||| | ||||| ||||||    
T  2384413 ataatttagcaaaactttgggaccaagaaa 2384384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 21498378 - 21498535
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||  |||||||||||     
T  21498378 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttatccagtacataaatatatattattga 21498477  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  21498478 gtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 21498535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 368 - 489
Target Start/End: Original strand, 37891821 - 37891942
Alignment:
Q  368 cttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttac 467  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  37891821 cttggaataaacaccttttcacctatattagatccagatattacctctgcctcgagcacaaatttacccatctttgtaataatcaatcttgtaccgttac 37891920  T
Q  468 ataagcccaaattttgatctat 489  Q
    ||||||||||||||||||||||    
T  37891921 ataagcccaaattttgatctat 37891942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 19725227 - 19725058
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||| |||||||||| |||||||| || |||||||||||    
T  19725227 agtacaaaaatatgttattcagtacataaatacattattgagtatcaaaatatattttagatcaagcactaaaatacattagattgccaaccaaaatatt 19725128  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||| ||| |||| |||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  19725127 tcagattgagtttcaaattattctagattgcgttctaaaatattttagcaaaacttggggacaaagaaaa 19725058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 19727138 - 19727307
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||||||||| ||||||| |||||||||||||||| || | ||||||||||||| |||||||| || |||||||||||    
T  19727138 agtacaaaaatatattattcagtacataaatacattattgagtatcaaaatatattttagattaaacactaaaatacattagattgccaaccaaaatatt 19727237  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||    
T  19727238 tcagattgtgtttcaaaatattttagattacgttctaaaatattttagcaaaacttgggaaaaaagaaaa 19727307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 366 - 493
Target Start/End: Original strand, 23089559 - 23089686
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||||| ||||||||| |||    
T  23089559 accttggaataaacacattttcacctatattagatccagatattacctctgcttcgagcacaaatttacccatctttgtaataatcaatcttgtactgtt 23089658  T
Q  466 acataagcccaaattttgatctatggtc 493  Q
    ||||||||||||||||||||||||||||    
T  23089659 acataagcccaaattttgatctatggtc 23089686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 52 - 235
Target Start/End: Complemental strand, 41097294 - 41097110
Alignment:
Q  52 aaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagattt 151  Q
    |||||||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| |||  |||||||||||||||||||     
T  41097294 aaaatatattattcaatacatgaatatattattgactacaaaaatatattattgactatcaaaatatatttcagatcatgcactaaaatatattagattg 41097195  T
Q  152 cctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||||||||  |||||| ||| |||||||| |||||| ||||| |||||| |||||||||||| ||||||| |||||||    
T  41097194 cctaccaaaatatttcagattgtattcgaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 41097110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 52100564 - 52100437
Alignment:
Q  39 tatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggtcaaacacta 136  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  52100564 tatattgagtacaaaaatatattattcagtacataaatatgttatttagtacataaatatatattattgagtatcaaaatatatttcagatcaagcacta 52100465  T
Q  137 aaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||  ||||||||||||    
T  52100464 aaatatattagattgtctaccaaaatat 52100437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 3094863 - 3095032
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  3094863 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 3094962  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  3094963 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 3095032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 40232699 - 40232544
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||| || ||| |||||||||||||  |||||||||||||||||  |||  ||||||||||||||||||| |||||||||||||||  |||||||||||    
T  40232699 ttattgaggacaaaaatatattattgactatcaaaatatatttcatatcacgcactaaaatatattagattgcctaccaaaatatttcagattgtgttcc 40232600  T
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |||||||| |||||| ||||  |||||||||||||| ||| ||||||| |||||||    
T  40232599 aaaatattctagattgcgtttcaaaatattttagcataacttggggactaagaaaa 40232544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 1067228 - 1067360
Alignment:
Q  102 attgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttct 201  Q
    |||| ||| |||||||||||| || ||||| ||||||||||||||||||  ||||||||||||||  ||||||||||||||||||| |||||| ||||||    
T  1067228 attgagtaccaaaatatattttagatcaaagactaaaatatattagattgtctaccaaaatatttcagattgtgttccaaaatattctagattgcgttct 1067327  T
Q  202 aaaatattttagcaaaacatggggacaaagaaa 234  Q
    |||||||||||||||||| ||| ||| ||||||    
T  1067328 aaaatattttagcaaaacttggagactaagaaa 1067360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 14804231 - 14804381
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    |||||||  |||||| |||| ||||||| | |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||  |||||||||||     
T  14804231 aaaatatttcaattgagtaccaaaatatttcatattgagtacaaaaatatattattcagtccataaatatgttattcagtacataaatatatattattga 14804330  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| ||||    
T  14804331 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgccta 14804381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 14813573 - 14813644
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14813573 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 14813644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 81 - 227
Target Start/End: Original strand, 13894083 - 13894232
Alignment:
Q  81 tattcagtacataaatatattat--tgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtg-tt 177  Q
    |||| |||||| |||||||||||  | |||| ||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||   |||||| ||    
T  13894083 tattgagtacaaaaatatattatattatgtaccaaaatatatttcagatcaagcactaaaatataatagattgcctaccaaaatatttcaaattgtgttt 13894182  T
Q  178 ccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    |||||||||| |||||| ||||| |||||||||||||||||| |||||||    
T  13894183 ccaaaatattttagattgcgttccaaaatattttagcaaaacttggggac 13894232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 2368060 - 2368128
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatg 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2368060 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatg 2368128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 2384322 - 2384254
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatg 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2384322 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatg 2384254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 21498794 - 21498861
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21498794 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 21498861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 52100186 - 52100119
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52100186 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 52100119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 22428274 - 22428203
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22428274 ctagtgcttacttagttcacacaattatgtacccccattatataatattaggtcaaaaattggggtatgaca 22428203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 8267146 - 8267034
Alignment:
Q  113 aaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttta 212  Q
    ||||||||||| | |||  |||| ||||||||||||||  ||||||||||||||  ||||||||||||||||||| |||||| ||||| |||||||||||    
T  8267146 aaatatatttccgatcatgcacttaaatatattagattgtctaccaaaatatttcagattgtgttccaaaatattctagattgcgttccaaaatatttta 8267047  T
Q  213 gcaaaacatgggg 225  Q
    ||||||| |||||    
T  8267046 gcaaaacttgggg 8267034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 490
Target Start/End: Complemental strand, 29245269 - 29245145
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| ||||| |||||||| ||| ||||||||  | | ||||||| |||||| | ||| |||||||| ||| |||| ||||||||    
T  29245269 accttggaataaacaccttctcaccgatattagaaccagatattacccgttcttcgagcaaaaattttctcatctttgtaatgatcaatctcgtaccgtt 29245170  T
Q  466 acataagcccaaattttgatctatg 490  Q
    ||||||||||||| |||||||||||    
T  29245169 acataagcccaaaatttgatctatg 29245145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 50708690 - 50708570
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| ||||| |||||||| ||| ||||||||  | | |||||||||||||| | ||| |||||||| ||| |||| ||||||||    
T  50708690 accttggaataaacaccttctcaccgatattagaaccagatattacccgtccttcgagcacaaattttcacatctttgtaatgatcaatctcgtaccgtt 50708591  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  50708590 acataagcccaaactttgatc 50708570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 14819699 - 14819790
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat 100  Q
    |||||||| |||||| |||| ||||||||| |||||||||| ||||||||||||| | || ||||||| |||||||||||||||||||||||    
T  14819699 aaaatatctcaattgagtaccaaaatatatcatattgagtataaaaatatattattcggtccataaatatgttattcagtacataaatatat 14819790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 26199096 - 26199224
Alignment:
Q  42 attgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatat--atttcaggtcaaacact 135  Q
    ||||||||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||  ||| | ||||||||||||  ||||||| |||||||||    
T  26199096 attgagtaccaaaatatatcatattgagtacagaaatatattattcagtacataaatatatattatcgagtatcaaaatatatatttcagatcaaacact 26199195  T
Q  136 aaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||| |||||||||||||    
T  26199196 aaaatatattagattgcctaccaaaatat 26199224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 17213764 - 17213613
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||| |||||| |||||||| |||| |||| |||||||  |  || |||  ||||||||||||||||||| |||| |||||||||    
T  17213764 agtacaaaaatatattatttagtacaaaaatatatcattgagtattaaaatat--tcaagatcatgcactaaaatatattagattgcctatcaaaatatt 17213667  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaac 219  Q
    |  |||||| |||||||| ||| |||||| ||||| ||||||||||||||||||    
T  17213666 tcagattgtattccaaaaaattctagattgcgttccaaaatattttagcaaaac 17213613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 486
Target Start/End: Original strand, 13926582 - 13926702
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| ||||| |||||||| ||| ||||||||  | | |||||||||||||| ||||| |||||||| ||| ||||  |||| ||    
T  13926582 accttggaataaacaccttctcaccgatattagaaccagatattacccgtccttcgagcacaaattttcccatctttgtaatgatcaatctcctaccatt 13926681  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  13926682 acataagcccaaactttgatc 13926702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 16836376 - 16836305
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    |||||||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||||    
T  16836376 ctagtgcttatttcgttcacacaattatgtagccccactacataatcttaggtcaaaaattggagtatgaca 16836305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 42 - 235
Target Start/End: Complemental strand, 23285186 - 23284990
Alignment:
Q  42 attgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| |||||||||  |||  |||||| |||| | ||||| ||| || ||||||| ||||| |||| ||||||||||||||  ||   || ||||    
T  23285186 attgagtaccaaaatatatcatattgagtacaaaaatattttattgagtgcaaaaatatactattgagtattaaaatatatttcagaccacgtaccaaaa 23285087  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttta-gcaaaacatggggacaaagaaaa 235  Q
    ||||||| ||| | ||| |||||||||  |||||||  ||||||||||  ||||| ||||| ||||||||||| ||||||| | ||||| |||||||    
T  23285086 tatattatattgcatacaaaaatatttcagattgtgcaccaaaatatttcagattgcgttccaaaatattttaggcaaaacttagggactaagaaaa 23284990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 187
Target Start/End: Complemental strand, 26319528 - 26319423
Alignment:
Q  83 ttcagtacataaatatattattgtgtatcaaaatatattt-caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaa 181  Q
    ||||||||| |||||||||||||  ||  ||||||||||| ||| |||  | ||||||||||||| ||| ||||| |||||||||| |||||||||||||    
T  26319528 ttcagtacagaaatatattattgactactaaaatatattttcagatcatgctctaaaatatattatattgcctactaaaatattttagattgtgttccaa 26319429  T
Q  182 aatatt 187  Q
    ||||||    
T  26319428 aatatt 26319423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 39036851 - 39036751
Alignment:
Q  87 gtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatat 186  Q
    ||||| |||||||| |||| || |||||||||||||||| |||   |||||||||||||||||| | |||||||||||||  ||||  ||||||||||||    
T  39036851 gtacaaaaatatatgattgagtgtcaaaatatatttcagatcatgtactaaaatatattagattgcataccaaaatatttcagattaagttccaaaatat 39036752  T
Q  187 t 187  Q
    |    
T  39036751 t 39036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 48650833 - 48650713
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||| ||||| ||| || ||||| ||||| || ||| |||||| |  | | |||||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  48650833 accttgtaataaacactttctcaccgatatttgaaccatatattatccgtccttcgagcacaaattttcccatctttgtaatgatcaatctcgtaccgtt 48650734  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  48650733 acataagcccaaactttgatc 48650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 39036997 - 39036890
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||| |||||| ||||||||||||| || |||||||||||||||| |||    | ||||||||||||| | | |||||||||||||| |||||||  ||    
T  39036997 ttattgagtacaaaaatatattattgagtgtcaaaatatatttcagatcacgtgccaaaatatattagactgcataccaaaatattttagattgtgcacc 39036898  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  39036897 aaaatatt 39036890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 14813467 - 14813517
Alignment:
Q  189 tagattacgttctaaaatattttagcaaaacatggggacaaagaaaagcac 239  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  14813467 tagattgcgttctaaaatattttagcaaaacatggagacaaagaaaagcac 14813517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 8273427 - 8273308
Alignment:
Q  117 atatttcaggtcaaac-actaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagca 215  Q
    ||||||||| |||||  |||||||||||||||||| | |||||||||||||  || ||| |||||||||||| || | | ||||  |||||||||||| |    
T  8273427 atatttcagatcaaagtactaaaatatattagattgcataccaaaatatttcagaatgtattccaaaatattctataatgcgtttcaaaatattttagta 8273328  T
Q  216 aaacatggggacaaagaaaa 235  Q
    |||| || |||| |||||||    
T  8273327 aaacttgaggactaagaaaa 8273308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 19725264 - 19725215
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatat 58  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  19725264 aaaatatctcaattgtgtaccaaaatatatcatattgagtacaaaaatat 19725215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 19724998 - 19724959
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  19724998 ctagtgcttacttcgttcacacaattatgtaccctcatta 19724959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 226
Target Start/End: Complemental strand, 27308204 - 27308089
Alignment:
Q  111 caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattt 210  Q
    ||||||||||||||||||||  || ||||||||||||| | | |||||||||||||   |||   | |||||||||| || ||| ||||| |||||||||    
T  27308204 caaaatatatttcaggtcaagaaccaaaatatattagactgcataccaaaatatttcatatttcataccaaaatattttatattgcgttccaaaatattt 27308105  T
Q  211 tagcaaaacatgggga 226  Q
    || |||| | ||||||    
T  27308104 tatcaaagcttgggga 27308089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 40232463 - 40232424
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  40232463 ctagtgcttacttcgttcacataattatgtacccccatta 40232424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 1924412 - 1924354
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  1924412 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 1924354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 13894067 - 13894105
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  13894067 gtaccaaaatatattatattgagtacaaaaatatattat 13894105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 20923426 - 20923368
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  20923426 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 20923368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 39243372 - 39243314
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  39243372 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 39243314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 39246927 - 39246869
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  39246927 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 39246869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 41387324 - 41387266
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  41387324 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 41387266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 13894269 - 13894308
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  13894269 ctagtgcttacttcgttcacataattatgtaccccgatta 13894308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 19727101 - 19727155
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||| ||| |||||||||   ||||||||| ||||||||||||||||||||||||    
T  19727101 aaaacatctcaattgtgtttcaaaatatatcatattgagtacaaaaatatattat 19727155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 3094847 - 3094880
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  3094847 aaaatatatcatattgagtacaaaaatatattat 3094880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 23254430 - 23254398
Alignment:
Q  155 accaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||||| |||||||||||||||||||    
T  23254430 accaaaatattttcgattgtgttccaaaatatt 23254398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 23285187 - 23285143
Alignment:
Q  19 aattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||| |||| ||||||||| ||||||||||||||||||| ||||    
T  23285187 aattgagtaccaaaatatatcatattgagtacaaaaatattttat 23285143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 145; Significance: 4e-76; HSPs: 5)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 8945 - 8734
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||| |    
T  8945 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 8846  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| ||||||||||||||||||| |||| ||||| |||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||    
T  8845 caagcactaaaatatattagattgcctatcaaaaaatttcggattatgttccaaaatattttagattgcgttctaaaatattttagcaaaacatggagac 8746  T
Q  228 aaagaaaagcac 239  Q
    ||||||||||||    
T  8745 aaagaaaagcac 8734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 19589 - 19430
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||     
T  19589 aaaatatctcaattgagtactaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 19490  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  19489 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 19430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 8678 - 8607
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8678 ctagtgcttacttcgttcacacaattatgtacccccattatatgatcttaggtcaaaaattggggtatgaca 8607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 9027 - 8939
Alignment:
Q  80 ttattcagtacataaatatat--tattgtgtatcaaaatatat--ttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||||||||||||||||||  ||||| ||||||||||||||  ||||| |||| ||||||||||||||||||| |||||||||||||    
T  9027 ttattcagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 8939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 19436 - 19403
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  19436 aaaatatatcatattgagtacaaaaatatattat 19403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 144; Significance: 2e-75; HSPs: 10)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 30 - 234
Target Start/End: Complemental strand, 192963 - 192757
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||| |    
T  192963 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 192864  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  192863 caagcactaaaatatattagattgcctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 192764  T
Q  228 aaagaaa 234  Q
     ||||||    
T  192763 caagaaa 192757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 193634 - 193477
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    |||||||  ||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||     
T  193634 aaaatatgtcaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 193535  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  193534 gtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 193477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 193233 - 193087
Alignment:
Q  20 attgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaaata 117  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||| |||||||||||    
T  193233 attgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaata 193134  T
Q  118 tatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||    
T  193133 tatttcagatcaagcactaaaatatattagattgcctaccaaaatat 193087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 193093 - 192957
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||| |    
T  193093 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 192994  T
Q  128 caaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  192993 caagcactaaaatatattagattgcctaccaaaatat 192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 193483 - 193347
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||| |    
T  193483 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 193384  T
Q  128 caaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  193383 caagcactaaaatatattagattgcctaccaaaatat 193347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 193353 - 193217
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||| ||||||| ||||||||||| |    
T  193353 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaatatatatttcagat 193254  T
Q  128 caaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||| |||||||||||||||||||  ||||||||||||    
T  193253 caagcactaaaatatattagattgtctaccaaaatat 193217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 187818 - 187716
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||| |    
T  187818 aaaatatatcatattgagtacaaaaatatattatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 187719  T
Q  128 caa 130  Q
    |||    
T  187718 caa 187716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 192697 - 192630
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  192697 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 192630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 187898 - 187812
Alignment:
Q  80 ttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  187898 ttattcagtacataaatatatattattgagtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 187812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 187949 - 187895
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||| ||||||||    
T  187949 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaactatattat 187895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 3e-74; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 14868150 - 14867938
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||| || |    
T  14868150 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttaagat 14868051  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttct-aaaatattttagcaaaacatgggga 226  Q
    ||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||| || ||    
T  14868050 caagcactaaaatatattagattgcctatcaaaatattttggattgtgttccaaaatattctagattgcgttctaaaaatattttagcaaaacaaggaga 14867951  T
Q  227 caaagaaaagcac 239  Q
    |||||||||||||    
T  14867950 caaagaaaagcac 14867938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 26034915 - 26035147
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgt 106  Q
    |||||||  ||||||| ||| ||||||||| |||||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||  |||||||     
T  26034915 aaaatatgtcaattgtctaccaaaatatatcatattgagtataaaaatatattattcagtacataaatatgttattcggtacataaatatatattattga 26035014  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaat 206  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| |||| |||| ||||| |||||||||||||||||||| |||||| | |||||||||    
T  26035015 gtatcaaaatatatttcagatcaagtactaaaatatattagattgcctatcaaagtatttcggattgtgttccaaaatattctagattgcattctaaaat 26035114  T
Q  207 attttagcaaaacatggggacaaagaaaagcac 239  Q
    ||||||||||||||||| |||||||||||||||    
T  26035115 attttagcaaaacatggagacaaagaaaagcac 26035147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 9190916 - 9190687
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgt 106  Q
    |||||||| |||||| |||| ||||| ||| ||||||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||  |||||     
T  9190916 aaaatatctcaattgagtaccaaaatgtatcatattgagtacgaaaatatattattcagtacataaatatgttattcagtatataaatatatattattga 9190817  T
Q  107 gtatcaaaatata--tttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaa 204  Q
    |||||||||||||  |||||| |||| ||||||||||||||||||| ||||  |||||||||| ||||||||| |||| |||| |||||| |||||||||    
T  9190816 gtatcaaaatatacatttcagatcaagcactaaaatatattagattgcctattaaaatattttagattgtgtttcaaagtattctagattgcgttctaaa 9190717  T
Q  205 atattttagcaaaacatggggacaaagaaa 234  Q
    ||| |||  |||||| ||||||| ||||||    
T  9190716 ataattttacaaaacttggggaccaagaaa 9190687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 14891569 - 14891352
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatattt 122  Q
    |||||||||||||| ||||  ||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||||    
T  14891569 actaaaatatattagattgcctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatattt 14891470  T
Q  123 caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttct-aaaatattttagcaaaacat 221  Q
     || |||| ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  14891469 aagatcaagcactaaaatatattagattgcctatcaaaatatttcggattgtgttccaaaatattctagattgcgttctaaaaatattttagcaaaacat 14891370  T
Q  222 ggggacaaagaaaagcac 239  Q
    || || ||| ||||||||    
T  14891369 ggagataaacaaaagcac 14891352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 14868435 - 14868276
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||     
T  14868435 aaaatatgccaattgtctacaaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 14868336  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| |||| ||||||||    
T  14868335 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctatcaaaatat 14868276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 14898983 - 14898824
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    ||||||| |||| ||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||     
T  14898983 aaaatatgccaactgtctacaaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 14898884  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| | |||||||||||    
T  14898883 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcttaccaaaatat 14898824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 39320336 - 39320496
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||| |||||| |||||||| ||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||    
T  39320336 agtacaaaaatatattattcagtaaataaat-tattattgagtatcaaaatatatttcagatcatgcactaaaatatattagattgcctgccaaaatatt 39320434  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    |  ||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||    
T  39320435 tcagattgtgttccaaaatattctagattacgttccaaaatattttagcaaaatttggggac 39320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 52 - 235
Target Start/End: Complemental strand, 3997401 - 3997217
Alignment:
Q  52 aaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagattt 151  Q
    |||||||||||| || ||||| ||| | ||||| | |||  |||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||||    
T  3997401 aaaatatattattcaatacatgaatatattattgactacggaaatatattattgactatcaaaatatatttcagatcatacactaaaatatattagattt 3997302  T
Q  152 cctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||||||||  |||||| |||||||||||| |||||| | ||| |||||| |||||||||||| ||||||| |||||||    
T  3997301 cctaccaaaatatttcagattgtattccaaaatattctagattgctttccaaaatatttttagcaaaacttggggactaagaaaa 3997217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 372 - 493
Target Start/End: Original strand, 36895942 - 36896063
Alignment:
Q  372 gaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttacataa 471  Q
    |||||| ||||||||||||||||||||||| | ||||||||||| | |||||||||||||||||||| |||||||||||| ||||||||  |||||||||    
T  36895942 gaataaacaccttttcacctatattagatctagatattacctctgcttcgagcacaaatttacccatctttgtaataatcaatcttgtattgttacataa 36896041  T
Q  472 gcccaaattttgatctatggtc 493  Q
    ||||||||||||||||||||||    
T  36896042 gcccaaattttgatctatggtc 36896063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 14868282 - 14868144
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaa--atatatttcag 125  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||  ||||||||| ||||||||  |||||||||||    
T  14868282 aaaatatatcatattgagtacaaaaatatattatttagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatatttcag 14868183  T
Q  126 gtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
     |||| ||||||||||||||||||| |||||||||||||    
T  14868182 atcaagcactaaaatatattagattgcctaccaaaatat 14868144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 14898718 - 14898580
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaa--atatatttcag 125  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||| ||||||||  |||||||||||    
T  14898718 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatatttcag 14898619  T
Q  126 gtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
     |||| ||||||||||||||||||| | |||||||||||    
T  14898618 atcaagcactaaaatatattagattgcttaccaaaatat 14898580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 7902443 - 7902263
Alignment:
Q  56 tatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    |||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| |||  ||||||||||||||||||| | ||    
T  7902443 tatattattcaatacatgaatatattattgactacagaaatatattattgactatcaaaatatatttcagatcatgcactaaaatatattagattgctta 7902344  T
Q  156 ccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||||  |||||| |||||||||||| |||||| ||||| |||||| |||||||||||| ||||||| |||||||    
T  7902343 ccaaaatatttcagattgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 7902263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 14877499 - 14877644
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    ||||||| |||| ||| ||| ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||  |||||||||||     
T  14877499 aaaatatgccaactgtctacaaaaatatatcatattgagtacaaaaatatattatttagtacataaatatgttattcagtacataaatatatattattga 14877598  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatt 150  Q
    ||||||||  ||||||||||| |||| |||||||||||||||||||    
T  14877599 gtatcaaaatatatatttcagatcaagcactaaaatatattagatt 14877644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 13521305 - 13521147
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || ||||||||||||||||||| |||   |||||||| ||||||||| |||||| |||||||    
T  13521305 agtacaaaaatatattattcattacataaatatattactgagtatcaaaatatatttcagatcatgtactaaaatttattagattgcctacccaaatatt 13521206  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggg 224  Q
    |   |||||||||||||||||| |||||| |  || |||||||||||||||||| ||||    
T  13521205 tcaaattgtgttccaaaatattctagattgcaatccaaaatattttagcaaaacttggg 13521147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 15225903 - 15226050
Alignment:
Q  42 attgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||||||| ||||||||||||| ||||   ||  ||||||||    
T  15225903 attgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatattattgagtatcaaaatatagttcaaagcatgcactaaaa 15226002  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||| |||| ||||||||||  ||||||||| |||||||||    
T  15226003 tatattagattgcctatcaaaatatttcagattgtgttgcaaaatatt 15226050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 9185051 - 9184960
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat 100  Q
    |||||||| |||||| |||| ||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  9185051 aaaatatctcaattgagtaccaaaatatatcatattgagtacgaaaatatattattcagtacataaatatgttattcagtacataaatatat 9184960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 9184787 - 9184717
Alignment:
Q  296 tagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  9184787 tagtgcttacttcgttcacacaaatatgtacccccattatatgatcttaggtcaaaaattggggtatgaca 9184717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 14898611 - 14898468
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatat-- 120  Q
    |||||||||||||| ||||  ||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||      
T  14898611 actaaaatatattagattgcttaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatat 14898512  T
Q  121 ttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  14898511 ttcagatcaaacactaaaatatattagattgcctaccaaaatat 14898468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 14898855 - 14898712
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatat-- 120  Q
    |||||||||||||| ||||  ||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||      
T  14898855 actaaaatatattagattgcttaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatat 14898756  T
Q  121 ttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  14898755 ttcagatcaaacactaaaatatattagattgcctaccaaaatat 14898712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 26035206 - 26035276
Alignment:
Q  297 agtgcttacttcgttcacacaattatgtacccccattatataatctt-aggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26035206 agtgcttacttcgttcacacaattatgtacccccattatataatcttaaggtcaaaaattggggtatgaca 26035276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 14898474 - 14898404
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat 100  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  14898474 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatat 14898404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 14891296 - 14891228
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatga 364  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  14891296 ctagtgcttacttcgttcacacaattatgta-ccccattatataatcttaggtccaaaattggggtatga 14891228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 34561198 - 34561319
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| |||||||||||||||||| ||||||||||||||||||| |||   |||||||||| ||||||| | | | ||||||||    
T  34561198 agtacaaaaatatattattcaatacataaatatattattgagtatcaaaatatatttcagatcatgtactaaaatattttagattgcgttctaaaatatt 34561297  T
Q  166 ttggattgtgttccaaaatatt 187  Q
    || ||||| |||||||||||||    
T  34561298 ttagattgcgttccaaaatatt 34561319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 486
Target Start/End: Original strand, 29359487 - 29359607
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| ||| || ||||| |||||||| ||| ||||||||  | | |||||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  29359487 accttggaataaacactttctcaccgatattagaaccagatattacccgtccttcgagcacaaattttcccatctttgtaatgatcaatctcgtaccgtt 29359586  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  29359587 acataagcccaaactttgatc 29359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 31297814 - 31297696
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatt--tcaggtcaaacactaaaatatattagatttcctaccaaaata 163  Q
    |||||| |||| | |||||||||||||||||||||||||| |||||||||||||||  ||| ||     |||||||||||||||||| | |||| |||||    
T  31297814 agtacaaaaatatattattcagtacataaatatattattgagtatcaaaatatattaatcatgt-----actaaaatatattagattgcttacccaaata 31297720  T
Q  164 ttttggattgtgttccaaaatatt 187  Q
    |||| |||||||||||||||||||    
T  31297719 ttttagattgtgttccaaaatatt 31297696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 14867882 - 14867811
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||    
T  14867882 ctagtgcttactttgttcacacagttatgtacacccattatataatcttaggtcaaaaattgaggtatgaca 14867811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 9190626 - 9190556
Alignment:
Q  296 tagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  9190626 tagtgcttacttcgttcacacaaatatgtacccccattatatgatctaacgtcaaaaattggggtatgaca 9190556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 9184950 - 9184847
Alignment:
Q  132 cactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaag 231  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||| |||| |||| |||||| |||||||||||| |||  |||||  ||||||| |||    
T  9184950 cactaaaatatattagattgcctatcaaaatattttagattgtgtttcaaagtattctagattgcgttctaaaataattttacaaaatttggggaccaag 9184851  T
Q  232 aaaa 235  Q
    ||||    
T  9184850 aaaa 9184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 15225892 - 15225972
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| | ||||| ||||    
T  15225892 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatattattgagta 15225972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 21382465 - 21382345
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||| ||||| |||||| ||||| ||||| || ||| |||||| |  | | |||||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  21382465 accttgaaataaacaccttctcaccgatatttgaaccatatattatccgtccttcgagcacaaattttcccatctttgtaatgatcaatctcgtaccgtt 21382366  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  21382365 acataagcccaaactttgatc 21382345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 28389218 - 28389098
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||| | |||||| ||||| |||||||| ||  ||||||||  | | |||||||||||||| || || |||||||| ||| |||| ||||||||    
T  28389218 accttggaatcaacaccttctcaccgatattagaacctgatattacccgtccttcgagcacaaattttcctatctttgtaatgatcaatctcgtaccgtt 28389119  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  28389118 acataagcccaaactttgatc 28389098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 14891621 - 14891538
Alignment:
Q  85 cagtacataaatatat--tattgtgtatcaaaatatat--ttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||  ||||| ||||||||||||||  ||||| |||| ||||||||||||||||||| |||||||||||||    
T  14891621 cagtacataaatatatattattgagtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 14891538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 16908880 - 16908760
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||| ||| | |||||| ||||| |||||||| ||  ||||||||  | | |||||||||||||| || || |||||||| ||| |||| ||||||||    
T  16908880 accttgaaatcaacaccttctcaccgatattagaacctgatattacccgtccttcgagcacaaattttcctatctttgtaatgatcaatctcgtaccgtt 16908781  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  16908780 acataagcccaaactttgatc 16908760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 15011173 - 15011094
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| |||| | ||||| ||||    
T  15011173 aaatatctcaattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagta 15011094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 15805033 - 15804978
Alignment:
Q  111 caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattt 166  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  15805033 caaaatatatttcaggtcaaacgctaaaatatattagattgcataccaaaatattt 15804978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 41817569 - 41817729
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||| | ||||||||||| | ||||||||||||||||||| |||  |||||          |||| ||||||||||||||    
T  41817569 agtacaaaaatatattattcagtaaagaaatatattatcgagtatcaaaatatatttcagatcatgcacta----------gattgcctaccaaaatatt 41817658  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatat-tttagcaaaacatggggacaaagaaaa 235  Q
    |  |||| |||||||||||||| ||||||  |||| ||||||| ||||||||||| | ||||| |||||||    
T  41817659 tcagattatgttccaaaatattctagattgtgttccaaaatatatttagcaaaacttagggactaagaaaa 41817729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 3310013 - 3310121
Alignment:
Q  81 tattcagtacataaatatattat--tgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttc 178  Q
    |||| |||||| |||||||||||  | |||| |||| |||||||||| | |||||| |||||||||||||||   | |||||||||||| ||||| ||||    
T  3310013 tattgagtacaaaaatatattatattatgtaccaaactatatttcagattaaacaccaaaatatattagattgtatgccaaaatattttagattgggttc 3310112  T
Q  179 caaaatatt 187  Q
    |||||||||    
T  3310113 caaaatatt 3310121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 15011163 - 15011079
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttca 124  Q
    ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||    
T  15011163 attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttca 15011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 10713685 - 10713743
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  10713685 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 10713743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 10927455 - 10927513
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  10927455 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 10927513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 12488543 - 12488601
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  12488543 caattgagtacaaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 12488601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 34561268 - 34561346
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt-agcaaaacatggggacaaagaaaa 235  Q
    |||||||||| ||||| |||| |||||||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||    
T  34561268 aaaatattttagattgcgttctaaaatattttagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 34561346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 1150606 - 1150517
Alignment:
Q  135 taaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggg 224  Q
    |||||||||||||||||| |||||||||||||  |||| ||   |||||||||  | || |||||| |||||||||||||||||| ||||    
T  1150606 taaaatatattagatttcataccaaaatatttcagattatgcatcaaaatatttcaaataacgttccaaaatattttagcaaaacttggg 1150517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 31297830 - 31297758
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatatta 102  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||| | ||||| ||||   ||||||||||    
T  31297830 aaaatatatcacattgagtacaaaaatatattattcagtacataaatatattattgagtatcaaaatatatta 31297758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 3992843 - 3992804
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3992843 ctagtgcttacttcgttcacataattatgtacccccatta 3992804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 14953413 - 14953355
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  14953413 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 14953355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 25690730 - 25690788
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  25690730 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 25690788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 12383605 - 12383561
Alignment:
Q  81 tattcagtacataaatatattattgtgtatcaaaatatatttcag 125  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||    
T  12383605 tattgagtacaaaaatatattattgagtatcaaaatatatttcag 12383561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 34561427 - 34561466
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  34561427 ctagtgcttacttcattcacataattatgtacccccatta 34561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 41817553 - 41817592
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagta 69  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  41817553 aaaatatatcatattgagtacaaaaatatattattcagta 41817592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 41817809 - 41817848
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  41817809 ctagtgcttacttcgttcacataattatgtacccctatta 41817848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 42314893 - 42314838
Alignment:
Q  93 aaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattaga 148  Q
    ||||||||||||| ||||||||||||||||||| |||   || |||||||||||||    
T  42314893 aaatatattattgagtatcaaaatatatttcagatcacgtaccaaaatatattaga 42314838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 1150670 - 1150640
Alignment:
Q  33 atatattatattgagtacaaaaatatattat 63  Q
    |||||||||||||||||||||||||||||||    
T  1150670 atatattatattgagtacaaaaatatattat 1150640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 15799351 - 15799286
Alignment:
Q  169 gattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    ||||||||| |||||| || |||||| ||||| |||||||||||||||||  ||||||| |||||||    
T  15799351 gattgtgtttcaaaatgttctagattgcgttcaaaaatattttagcaaaa-ttggggactaagaaaa 15799286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 3310002 - 3310035
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  3310002 aaaatatatcatattgagtacaaaaatatattat 3310035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 13521321 - 13521288
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  13521321 aaaatatatcatattgagtacaaaaatatattat 13521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 368
Target Start/End: Original strand, 15580520 - 15580549
Alignment:
Q  339 atcttaggtcaaaaattggggtatgacacc 368  Q
    ||||||||||||||||||||||||||||||    
T  15580520 atcttaggtcaaaaattggggtatgacacc 15580549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 34561182 - 34561215
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  34561182 aaaatatatcatattgagtacaaaaatatattat 34561215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 47575420 - 47575453
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  47575420 aaaatatatcatattgagtacaaaaatatattat 47575453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 3310067 - 3310131
Alignment:
Q  155 accaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaac 219  Q
    |||||||||| || |||||| | |||||||||| ||||||  |||| ||||||||||| ||||||    
T  3310067 accaaaatatattagattgtatgccaaaatattttagattgggttccaaaatattttaacaaaac 3310131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 14898499 - 14898420
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatattatt 104  Q
    |||||||||||||| ||||  ||| |||||||||  |||  |||||| |||| | ||||||||||||||||||| |||||    
T  14898499 actaaaatatattagattgcctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttatt 14898420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 24663 - 24433
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgt 106  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  |||||     
T  24663 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 24564  T
Q  107 gtatcaaaatata--tttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaa 204  Q
    |||||||||||||  |||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| |||||| |||||||||    
T  24563 gtatcaaaatatacatttcagatcaagcactaaaatatattagattgcctaccaaaatattttagattgtgttccaaagtattctagattgcgttctaaa 24464  T
Q  205 atattttagcaaaacatggggacaaagaaaa 235  Q
    ||| ||||||||||| ||||||| |||||||    
T  24463 ataatttagcaaaacctggggaccaagaaaa 24433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 24372 - 24301
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgaca 366  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24372 ctagtgcttacttcgttcacacaattatgtacccccattatatgatcttaggtcaaaaattggggtatgaca 24301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 2 - 208
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||| |    
T  2 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 101  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| || ||||    
T  102 caagcactaaaatatattagattgcctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttgaggac 201  T
Q  228 aaagaaa 234  Q
     ||||||    
T  202 caagaaa 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 272 - 335
Alignment:
Q  299 tgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  272 tgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 140; Significance: 4e-73; HSPs: 8)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 81416 - 81622
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||| |    
T  81416 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 81515  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  81516 caagcactaaaatatattagattgcctaccaaaatattttagattgtgttacaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 81615  T
Q  228 aaagaaa 234  Q
     ||||||    
T  81616 caagaaa 81622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 65168 - 65374
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||| |    
T  65168 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaatatatttcagat 65267  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| |||| ||| |||||||||| |||||||| ||||||| ||||||||| ||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  65268 caagcacttaaaaatattagattgcctaccaacatattttagattgtgttacaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 65367  T
Q  228 aaagaaa 234  Q
     ||||||    
T  65368 caagaaa 65374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 64887 - 65044
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    ||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||| |||     
T  64887 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattgttga 64986  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  64987 gtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 65044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 65038 - 65174
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||| ||| ||||||||||||||||||| |    
T  65038 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattgttgagtatcaaaatatatttcagat 65137  T
Q  128 caaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  65138 caagcactaaaatatattagattgcctaccaaaatat 65174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 65434 - 65501
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  65434 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 65501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 81682 - 81749
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  81682 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcacaaattggggtat 81749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 81322 - 81422
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaata 163  Q
    |||||| |||| | |||||||||||||||||||||  | ||| | ||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||    
T  81322 agtacaaaaatatattattcagtacataaatatatattgttgagcatcaaaatatatttcagatcaagcactaaaatatattagattgcctacgaaaata 81421  T
Q  164 t 164  Q
    |    
T  81422 t 81422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 81285 - 81339
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  81285 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatatattat 81339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 2e-71; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 30 - 235
Target Start/End: Original strand, 8223813 - 8224020
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  |||||||  |||||||||||||||||| |    
T  8223813 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgaatatcaaaatatatttcagat 8223912  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  8223913 caagcactaaaatatattagattgcttaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 8224012  T
Q  228 aaagaaaa 235  Q
     |||||||    
T  8224013 caagaaaa 8224020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 30 - 232
Target Start/End: Complemental strand, 18349991 - 18349787
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||  ||||| ||||||||||||||||||| |    
T  18349991 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatcttattcagtacataaatatatattattgagtatcaaaatatatttcagat 18349892  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  18349891 caagcactaaaatatattagattgtctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 18349792  T
Q  228 aaaga 232  Q
     ||||    
T  18349791 caaga 18349787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 8197330 - 8197536
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||  |||||||||||||||||| |    
T  8197330 aaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatttatattattgaatatcaaaatatatttcagat 8197429  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    ||| |||||||||||||||||||   |||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  8197430 caagcactaaaatatattagattgtttaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaacttggggac 8197529  T
Q  228 aaagaaa 234  Q
     ||||||    
T  8197530 caagaaa 8197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 51923061 - 51923288
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgt 106  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||  ||||||||||| | |||||||||| ||||||||  |||||||     
T  51923061 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatatattattgagtacataaatattttattcagtatataaatatatattattga 51923160  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaat 206  Q
    ||||||||||||||||||| |||| ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||   |||||||||    
T  51923161 gtatcaaaatatatttcagatcaagcactaaaatatattagactgcctaccaaaatattttagattgtgttccaaaatattatagattgtattctaaaat 51923260  T
Q  207 attttagcaaaacatggggacaaagaaa 234  Q
    | ||||||||||| ||||| | ||||||    
T  51923261 aatttagcaaaacttgggggccaagaaa 51923288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 30106 - 30312
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatat--attattgtgtatcaaaatatatttcaggt 127  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||  ||||||| |||||||||||||||| || |    
T  30106 aaaatatatcatattgagtacaaaaatatattattcagtacatgaatatgttattcagtacataaatatatattattgagtatcaaaatatattttagat 30205  T
Q  128 caaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggac 227  Q
    |||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||| | |||||    
T  30206 caagaactaaaatatattagattgcctaccaaaatattttagattgtgttccaaaatattctagattgcgttctaaaataatttagcaaaactttgggac 30305  T
Q  228 aaagaaa 234  Q
     ||||||    
T  30306 caagaaa 30312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 14425082 - 14424864
Alignment:
Q  27 actaaaatatattatattgagtacaaaaatatat--tatgcagtacataaatttgttattcagtacataaatatat--tattgtgtatcaaaatatat-- 120  Q
    |||||||||||||| ||||  ||| |||||||||  |||  |||||| |||| | |||||||||||||||||||||  ||||| ||||||||||||||      
T  14425082 actaaaatatattagattgcctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatatattattgagtatcaaaatatatat 14424983  T
Q  121 ttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaaca 220  Q
    || || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  14424982 ttaagatcaaacactaaaatatattagatttcctatcaaaatatttcggattgtgttccaaaatattctagattgcgttctaaaatattttagcaaaaca 14424883  T
Q  221 tggggacaaagaaaagcac 239  Q
    ||| |||||||||||||||    
T  14424882 tggagacaaagaaaagcac 14424864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 8223662 - 8223819
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    ||||||| |||||| | ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||     
T  8223662 aaaatatgccaattatctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 8223761  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  8223762 gtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 8223819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 18350142 - 18349985
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    ||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||  |||||||||     
T  18350142 aaaatatgccaattgtctaccaaaatatatcatattgagtacaaaaatatattatttagtacataaatatgttattcagtacataaatatatattattga 18350043  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  18350042 gtatcaaaatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 18349985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 29964 - 30112
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgtgtatcaaaa 115  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||| |||||||||    
T  29964 caattgtctaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattgagtatcaaaa 30063  T
Q  116 tatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  30064 tatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 30112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 368 - 489
Target Start/End: Complemental strand, 18256059 - 18255938
Alignment:
Q  368 cttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgttac 467  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  18256059 cttggaataaacaccttttcacctatattagatccagatattacctctgcctcgagcacaaatttacccatctttgtaataatcaatcttgtaccgttac 18255960  T
Q  468 ataagcccaaattttgatctat 489  Q
    ||||||||||||||||||||||    
T  18255959 ataagcccaaattttgatctat 18255938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 14425210 - 14425051
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaat--atattattgt 106  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||||||||     
T  14425210 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 14425111  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  14425110 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 14425051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 8197179 - 8197336
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaa--tatattattgt 106  Q
    ||||||| |||||| | ||| ||||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||  ||||||||||     
T  8197179 aaaatatgccaattatctaccaaaatatatcatattgagtacaaaaatatattattcagtgcataaatatgttattcagtacataaatttatattattga 8197278  T
Q  107 gtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||| |||| ||||||||    
T  8197279 gtatcaaaatatatttcagatcaagcactaaaatttattagattgcctatcaaaatat 8197336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 52 - 235
Target Start/End: Complemental strand, 10585526 - 10585342
Alignment:
Q  52 aaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagattt 151  Q
    |||||||||||| || ||||| ||| | ||||| | ||||||||||||||||||  |||||||||||||||||| |||  |||||||||||||||||||     
T  10585526 aaaatatattattcaatacatgaatatattattgactacataaatatattattgactatcaaaatatatttcagatcatgcactaaaatatattagattg 10585427  T
Q  152 cctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    | |||||||||||||  |||||| |||||||||||| |||||| ||||| |||||| |||||||||||| ||||||| |||||||    
T  10585426 cttaccaaaatatttcagattgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 10585342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 3034417 - 3034586
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  3034417 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 3034516  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  3034517 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 3034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 8888704 - 8888873
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  8888704 agtacaaaaatatattattcaatacataaatatattaatgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 8888803  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  8888804 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 8888873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 8070453 - 8070621
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  8070453 agtacaaaaatatattattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 8070552  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    |  ||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||||| ||||||    
T  8070553 tcagattgtgttccaaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaa 8070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 3693407 - 3693562
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || ||||||||  |||||||||||    
T  3693407 ttattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatttcagattgtgttcc 3693506  T
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |||||||| |||||| ||||| ||| |||||||||||||| ||||||| |||||||    
T  3693507 aaaatattctagattgcgttccaaattattttagcaaaacttggggactaagaaaa 3693562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 8883944 - 8884112
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || |||||||    
T  8883944 agtacaaaaatatattattcaatacataaatatattaatgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatt 8884043  T
Q  166 ttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
    |  |||| |||||||||||||| |||||| ||||| |||  ||||||||||||| ||||||| ||||||    
T  8884044 tcagattttgttccaaaatattctagattgcgttccaaatcattttagcaaaacttggggactaagaaa 8884112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 30372 - 30439
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30372 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 30439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 18349725 - 18349658
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18349725 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 18349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 6595682 - 6595581
Alignment:
Q  133 actaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaatattttagcaaaacatggggacaaaga 232  Q
    |||||||||||||||||| |||||| ||||||||   |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||    
T  6595682 actaaaatatattagattgcctacccaaatatttcatattgtgttccaaaatattttagattgcgttctaaaatattttagcaaaacttggggactaaga 6595583  T
Q  233 aa 234  Q
    ||    
T  6595582 aa 6595581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 18699178 - 18699061
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||   ||  ||||||||||||||||||| ||||||||||||||    
T  18699178 agtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcctaccaaaatatt 18699079  T
Q  166 ttggattgtgttccaaaa 183  Q
    |  ||||||||| |||||    
T  18699078 tcagattgtgttgcaaaa 18699061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 16048784 - 16048896
Alignment:
Q  83 ttcagtacataaatatattattgtgtatcaaaatatattt-caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaa 181  Q
    |||||||||||||||||||||||  ||  ||||||||||| ||| ||| || ||||||||||||||||| ||||| |||||||||| ||||||||| |||    
T  16048784 ttcagtacataaatatattattgactactaaaatatattttcagatcatactctaaaatatattagattacctacaaaaatattttagattgtgtttcaa 16048883  T
Q  182 aatattatagatt 194  Q
    |||||| ||||||    
T  16048884 aatattctagatt 16048896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 366 - 490
Target Start/End: Original strand, 52419078 - 52419202
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| ||| | |||||| | ||| ||||||||  | | |||||||||||||| | |||||||||||| ||| |||| ||||||||    
T  52419078 accttggaataaacaccttctcaacgatattacaaccagatattacccgtccttcgagcacaaattttctcatatttgtaatgatcaatctagtaccgtt 52419177  T
Q  466 acataagcccaaattttgatctatg 490  Q
    ||||||||||||| |||||||||||    
T  52419178 acataagcccaaactttgatctatg 52419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 51923349 - 51923416
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  51923349 ctagtgcttacttcgttcacacaattatctacccccattgtataatctttggtcaaaaattggggtat 51923416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 8197594 - 8197651
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaa 352  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8197594 ctagtgcttacttcgttcacacacttatgtacccccattatataatcttaggtcaaaa 8197651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 3673375 - 3673482
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||||| ||||||||||||||| || |||||||||||||||| || |||   |||||||||||||||||| ||| || ||||||||  |||||||||||    
T  3673375 ttattcaatacataaatatattactgagtatcaaaatatattttagatcatgtactaaaatatattagattgccttcccaaatatttcagattgtgttcc 3673474  T
Q  180 aaaatatt 187  Q
    ||| ||||    
T  3673475 aaattatt 3673482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 53358893 - 53359000
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    ||||| ||||||| ||||||||||||  |||||||||||||||||| |||   |||||||||||||| |||  ||||||||||||||   ||||||||||    
T  53358893 ttatttagtacattaatatattattgattatcaaaatatatttcagatcatttactaaaatatattacattgactaccaaaatatttcatattgtgttcc 53358992  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  53358993 aaaatatt 53359000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 12899042 - 12898900
Alignment:
Q  93 aaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattataga 192  Q
    ||||||||||||| |||||||||||||||||   | |  |||| ||||||||| |||| | |||||||||||||  | ||||||| | ||||||| ||||    
T  12899042 aaatatattattgagtatcaaaatatatttcttattatgcactgaaatatatttgattgcataccaaaatatttcaggttgtgtttcgaaatattctaga 12898943  T
Q  193 ttacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    || ||||| |||||||||||||||||  | ||||| |||||||    
T  12898942 ttgcgttccaaaatattttagcaaaatttagggactaagaaaa 12898900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 45903865 - 45903767
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||  |||   |||||||||| ||||||| | | |||||||||    
T  45903865 agtacaaaaatttattattcagtacataaatatattattgagtatcaaaatatatttcaaatcatgtactaaaatattttagattgcgttccaaaatat 45903767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 631782 - 631858
Alignment:
Q  111 caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    |||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||  |||||| ||||||||||||    
T  631782 caaaatatatttcagaccaatcactaaaatatattagattgcctaccaaaatatttcagattgtattccaaaatatt 631858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 16043291 - 16043403
Alignment:
Q  83 ttcagtacataaatatattattgtgtatcaaaatatattt-caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaa 181  Q
    |||||||||||||||||||||||  ||  ||||||||||| ||| ||| || ||||||||||||||||| ||||  |||||||||| |||| |||| |||    
T  16043291 ttcagtacataaatatattattgactactaaaatatattttcagatcataccctaaaatatattagattacctatgaaaatattttagattatgtttcaa 16043390  T
Q  182 aatattatagatt 194  Q
    |||||| ||||||    
T  16043391 aatattctagatt 16043403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 486
Target Start/End: Original strand, 38656207 - 38656327
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| |||   |||||||| ||| ||||||||  | | ||||||| |||||| ||||| |||||||| ||| |||| ||||||||    
T  38656207 accttggaataaacaccttctcaatgatattagaaccagatattacccgtccttcgagcataaattttcccatctttgtaatgatcaatctcgtaccgtt 38656306  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  38656307 acataagcccaaactttgatc 38656327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 16055966 - 16056089
Alignment:
Q  83 ttcagtacataaatatattattgtgtatcaaaatatattt-caggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaa 181  Q
    |||| |||| |||||||||||||  ||  ||||||||||| ||| ||| || |||| |||||||||||| ||||| |||||||||| |||||||||||||    
T  16055966 ttcattacagaaatatattattgactacaaaaatatattttcagatcatactctaatatatattagattacctactaaaatattttagattgtgttccaa 16056065  T
Q  182 aatattatagattacgttctaaaa 205  Q
    |||||  |||||| ||||| ||||    
T  16056066 aatatcctagattgcgttccaaaa 16056089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 486
Target Start/End: Complemental strand, 31487052 - 31486932
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||| ||||| |||||| ||||| ||||| || ||| |||||| |  | | |||||||||||| | ||||| |||||||| ||| |||| ||||||||    
T  31487052 accttgaaataaacaccttctcaccgatatttgaaccatatattatccgtccttcgagcacaaatgttcccatctttgtaatgatcaatctcgtaccgtt 31486953  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  31486952 acataagcccaaactttgatc 31486932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 490
Target Start/End: Original strand, 36947440 - 36947564
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||| ||||||| |||||| ||||| |||||||| ||| |||||||   | | |  ||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  36947440 acctcggaataaacaccttctcaccgatattagaaccagatattacacgtcctttcagcacaaattttcccatctttgtaatgatcaatctcgtaccgtt 36947539  T
Q  466 acataagcccaaattttgatctatg 490  Q
    | ||||||||||| |||||||||||    
T  36947540 aaataagcccaaactttgatctatg 36947564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 22758537 - 22758458
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| |||| | ||||| ||||    
T  22758537 aaatatctcaattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagta 22758458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 11997342 - 11997288
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  11997342 aaaatatctcaattgtgtacgaaaatatatcatattgagtacaaaaatatattat 11997288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 22758527 - 22758443
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttca 124  Q
    ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||    
T  22758527 attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttca 22758443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 8224079 - 8224122
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccattatata 338  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  8224079 ctagtgcttacttcgttcacacacttatgtacccccattatata 8224122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 6595751 - 6595697
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  6595751 aaaatatcttaattgagtacaaaaatatattatattgagtacaaaaatatattat 6595697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 16749269 - 16749211
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  16749269 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 16749211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 456
Target Start/End: Complemental strand, 18198531 - 18198441
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatct 456  Q
    |||||||||||| |||||||||||| ||||||||  || ||||||||  | | |||||||||||||| ||||| |||||||| ||| ||||    
T  18198531 accttggaataaacaccttttcaccgatattagaatcagatattacccgtccttcgagcacaaattttcccatctttgtaatgatcaatct 18198441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 19776630 - 19776688
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  19776630 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 19776688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 4106684 - 4106626
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  4106684 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 4106626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 4110536 - 4110478
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  4110536 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 4110478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 15965791 - 15965849
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  15965791 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 15965849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 15969715 - 15969773
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  15969715 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 15969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 15973639 - 15973697
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  15973639 caattgagtaccaaaatatatcatattaagtacaaaaatatattattcagtacaaaaat 15973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 37438909 - 37438851
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||| ||| ||||    
T  37438909 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagcacaaaaat 37438851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8488740 - 8488696
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatatta 62  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  8488740 caattgagtaccaaaatatattatattaagtacaaaaatatatta 8488696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 9706940 - 9706896
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatatta 62  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  9706940 caattgagtaccaaaatatattatattaagtacaaaaatatatta 9706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 45903881 - 45903822
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    |||||||||  |||||||||||||||| |||||| |||||||||||| | ||||| ||||    
T  45903881 aaaatatatcttattgagtacaaaaatttattattcagtacataaatatattattgagta 45903822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 53502429 - 53502362
Alignment:
Q  111 caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttc 178  Q
    ||||||||||||||| ||||  || |||||||||||||||   |||||||||||||  ||||||||||    
T  53502429 caaaatatatttcagatcaagtaccaaaatatattagattatataccaaaatatttcagattgtgttc 53502362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 410
Target Start/End: Original strand, 9372585 - 9372627
Alignment:
Q  368 cttggaataagcaccttttcacctatattagatccaaatatta 410  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||    
T  9372585 cttggaataaacactttttcacctatattagatccagatatta 9372627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 3034401 - 3034434
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  3034401 aaaatatatcatattgagtacaaaaatatattat 3034434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 8070437 - 8070470
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  8070437 aaaatatatcatattgagtacaaaaatatattat 8070470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 8883928 - 8883961
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  8883928 aaaatatatcatattgagtacaaaaatatattat 8883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 8888688 - 8888721
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  8888688 aaaatatatcatattgagtacaaaaatatattat 8888721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 370
Target Start/End: Original strand, 13111827 - 13111856
Alignment:
Q  341 cttaggtcaaaaattggggtatgacacctt 370  Q
    ||||||||||||||||||||||||||||||    
T  13111827 cttaggtcaaaaattggggtatgacacctt 13111856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 330
Target Start/End: Complemental strand, 6595496 - 6595464
Alignment:
Q  298 gtgcttacttcgttcacacaattatgtaccccc 330  Q
    |||||||||||||||||| ||||||||||||||    
T  6595496 gtgcttacttcgttcacataattatgtaccccc 6595464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 16048730 - 16048822
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatatt 101  Q
    ||||||||  ||||| |||| ||||||| ||||||| || |||| |||||||| | |||||||||||| | ||||| | |||  |||||||||    
T  16048730 aaaatatcttaattgagtaccaaaatatgttatattaagaacaataatatatttttcagtacataaatatattattgactactaaaatatatt 16048822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 98; Significance: 5e-48; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 30411 - 30570
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataa--atatattattgt 106  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||     
T  30411 aaaatatctcaattgagtaccaaaatatatcatattgagtacaaaaatatattattcagtacataaatatgttattcagtacataaatatatattattga 30510  T
Q  107 gtatcaaa--atatatttcaggtcaaacactaaaatatattagatttcctaccaaaatat 164  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  30511 gtatcaaaatatatatttcagatcaagcactaaaatatattagattgcctaccaaaatat 30570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 24278 - 24385
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||    |  |||||||||||||||||||  | | ||||||||||  ||||||||| |    
T  24278 ttattcagtacagaaatatattattgagtatcaaaatatagttcaaagtatgcactaaaatatattagattgtcaatcaaaatatttcagattgtgttgc 24377  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  24378 aaaatatt 24385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 24248 - 24307
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||||| |||||||||||||||||| ||||| ||||||| |||| | ||||| ||||    
T  24248 aaaatatatcatattgagtacaaaaataaattattcagtacagaaatatattattgagta 24307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 49320 - 49115
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtca 129  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||| | ||||| | |||| |||||||||||||  ||||||||||| |||||| |||    
T  49320 aaaatatattctattgagtacaaaa-tatattattcactacataaatatattattgactacagaaatatattattgactatcaaaatatgtttcagatca 49222  T
Q  130 aacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggaca 228  Q
      ||||||||||||||||||| |||||||||||||||  |||||| |||||||||||| |||||| ||||| |||||| |||||||||||| ||| |||     
T  49221 tgcactaaaatatattagattgcctaccaaaatatttcagattgtattccaaaatattctagattgcgttccaaaatacttttagcaaaacttggagact 49122  T
Q  229 aagaaaa 235  Q
    |||||||    
T  49121 aagaaaa 49115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 30 - 235
Target Start/End: Original strand, 149314 - 149519
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtca 129  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||| | ||||| | |||| |||||||||||||  ||||||||||| |||||| |||    
T  149314 aaaatatattctattgagtacaaaa-tatattattcactacataaatatattattgactacagaaatatattattgactatcaaaatatgtttcagatca 149412  T
Q  130 aacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggaca 228  Q
      ||||||||||||||||||| |||||||||||||||  |||||| |||||||||||| |||||| ||||| |||||| |||||||||||| ||| |||     
T  149413 tgcactaaaatatattagattgcctaccaaaatatttcagattgtattccaaaatattctagattgcgttccaaaatacttttagcaaaacttggagact 149512  T
Q  229 aagaaaa 235  Q
    |||||||    
T  149513 aagaaaa 149519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 85; Significance: 3e-40; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 47305 - 47125
Alignment:
Q  56 tatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    |||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| |||  ||||||||||||||||||| | ||    
T  47305 tatattattcaatacatgaatatattattgactacagaaatatattattgactatcaaaatatatttcagatcatgcactaaaatatattagattgctta 47206  T
Q  156 ccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||||  |||||| |||||||||||| |||||| |||||||||||| |||||||||||| ||||||| |||||||    
T  47205 ccaaaatatttcagattgtattccaaaatattctagattgcgttctaaaatatttttagcaaaacttggggactaagaaaa 47125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 52249 - 52069
Alignment:
Q  56 tatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    |||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| |||  ||||||||||||||||||| | ||    
T  52249 tatattattcaatacatgaatatattattgactacagaaatatattattgactatcaaaatatatttcagatcatgcactaaaatatattagattgctta 52150  T
Q  156 ccaaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||||  |||||| |||||||||||| |||||| ||||| |||||| |||||||||||| ||||||| |||||||    
T  52149 ccaaaatatttcagattgtattccaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 52069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 51986 - 51947
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  51986 ctagtgcttacttcgttcacataattatgtacccccatta 51947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 76; Significance: 6e-35; HSPs: 3)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 35 - 187
Target Start/End: Original strand, 83663 - 83817
Alignment:
Q  35 atattatattgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaac 132  Q
    |||||| ||||||||  ||||||||||||    |||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||| |||       
T  83663 atattagattgagtatcaaaatatattatattgagtacaaaaatatattattcagtacataaatatattattgagtatcaaaatatatttcagatcatgt 83762  T
Q  133 actaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    |||||||||||||||||| |||||||||||||||  ||||| |||||||||||||    
T  83763 actaaaatatattagattgcctaccaaaatatttcagattgcgttccaaaatatt 83817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 83680 - 83713
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||||||||||||||||||||||||||||    
T  83680 aaaatatattatattgagtacaaaaatatattat 83713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 83929 - 83965
Alignment:
Q  298 gtgcttacttcgttcacacaattatgtacccccatta 334  Q
    |||||||||||||||||  ||||||||||||||||||    
T  83929 gtgcttacttcgttcacttaattatgtacccccatta 83965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 235
Target Start/End: Complemental strand, 9212 - 9031
Alignment:
Q  56 tatattatgcagtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttccta 155  Q
    |||||||| || ||||| ||| | ||||| | |||| |||||||||||||  |||||||||||||||||| | |  ||||||||||||||||||| | ||    
T  9212 tatattattcaatacatgaatatattattgactacagaaatatattattgactatcaaaatatatttcagattatgcactaaaatatattagattgctta 9113  T
Q  156 ccaaaatattttggattgtgttcc-aaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||||  |||||| |||| |||||||| |||||| ||||| |||||| |||||||||||| ||||||| |||||||    
T  9112 ccaaaatatttcagattgtattccaaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 9031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 22539 - 22609
Alignment:
Q  297 agtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtatgacac 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22539 agtgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattgaggtatgacac 22609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 22422 - 22477
Alignment:
Q  180 aaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaaa 235  Q
    |||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||    
T  22422 aaaatattctagattgcgttctaaaatattttagcaaaaaatggagacaaagaaaa 22477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 22379 - 22428
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatat 58  Q
    |||||||  ||||||| ||||||||||||| |||||||||||||||||||    
T  22379 aaaatatgtcaattgtctactaaaatatatcatattgagtacaaaaatat 22428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 71928 - 72037
Alignment:
Q  106 tgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatattatagattacgttctaaaa 205  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||| | ||| |||||||||  |||||||||||||||||||||||||| ||||  ||||    
T  71928 tgtaccaaaatatatttcagatcaagcactaaaatatattagattgcatactaaaatatttcagattgtgttccaaaatattatagattgcgtttaaaaa 72027  T
Q  206 tattttagca 215  Q
    ||||||||||    
T  72028 tattttagca 72037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 22054 - 22197
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||   ||  ||||||||    
T  22054 attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcaaagcatgcactaaaa 22153  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaa 183  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||    
T  22154 tatattagattgcctaccaaaatatttcagattgtgttgcaaaa 22197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 5202 - 5081
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||   ||  || |||||||||||||||| ||||||||||||||    
T  5202 agtacaaaaatatattattcagtacaaaaatatattattgagtatcaaaatatatttcaaagcatgcaataaaatatattagattgcctaccaaaatatt 5103  T
Q  166 ttggattgtgttccaaaatatt 187  Q
    |  ||||||||| |||||||||    
T  5102 tcagattgtgttgcaaaatatt 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 10 - 187
Target Start/End: Complemental strand, 2130 - 1973
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagtacataaatatattattgtgta 109  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||                    |||||||| ||||||||||||| |||    
T  2130 aaatatctcaattgagtactaaaatatattatattaagtacaaaaatatattat--------------------tcagtacaaaaatatattattgagta 2051  T
Q  110 tcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    |||||||||||||||    |  ||||||||||||||||||| |||| ||||||||||  ||||||||| |||||||||    
T  2050 tcaaaatatatttcaatggatgcactaaaatatattagattgcctatcaaaatatttcagattgtgttgcaaaatatt 1973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 127176 - 127293
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||||||||   ||  ||||||||||||||||||| ||||||||||||||    
T  127176 agtacaaaaatatattattcagtacagaaatatattattgagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcctaccaaaatatt 127275  T
Q  166 ttggattgtgttccaaaa 183  Q
    |  ||||||||| |||||    
T  127276 tcagattgtgttgcaaaa 127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 127140 - 127193
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||| |||||| || | ||||||||||||||| ||||||||||||||||||    
T  127140 aaatatctcaattgagtgccaaaatatattatattaagtacaaaaatatattat 127193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 7914 - 8057
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| |||| | || ||||||||| ||||||||||||| ||||||||||||||||||   ||  ||||||||    
T  7914 attgagtaccaaaatatattatattaagtacaaaaatatattcttcagtacaaaaatatattattgagtatcaaaatatatttcaaagcatgcactaaaa 8013  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaa 183  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||    
T  8014 tatattagattgcctaccaaaatatttcagattgtgttgcaaaa 8057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 22679 - 22786
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||   ||  ||||||||||||||||||| |||||||||||||||  ||||||||| |    
T  22679 ttattcagtacaaaaatatattattaagtatcaaaatatatttcaaagcatgcactaaaatatattagattgcctaccaaaatatttcagattgtgttgc 22778  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  22779 aaaatatt 22786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 22644 - 22682
Alignment:
Q  25 gtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  22644 gtactaaaatatattatattaagtacaaaaataaattat 22682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 26836 - 26957
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | |||||||||||| ||||||||||||| ||||||||||||| ||||   ||  ||||||||||||||||||| |||| |||||||||    
T  26836 agtacaaaaatatattattcagtacaaaaatatattattgagtatcaaaatatagttcaaagcatgcactaaaatatattagattgcctatcaaaatatt 26935  T
Q  166 ttggattgtgttccaaaatatt 187  Q
    |  ||||||||| |||||||||    
T  26936 tcagattgtgttgcaaaatatt 26957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 26820 - 26853
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattat 63  Q
    ||||||||| ||||||||||||||||||||||||    
T  26820 aaaatatatcatattgagtacaaaaatatattat 26853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 183
Target Start/End: Original strand, 7135 - 7278
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| |||| | |||||||||||| ||| ||||||||| ||||||||||||||||||   ||  ||||||||    
T  7135 attgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaagatattattgagtatcaaaatatatttcaaagcatgcactaaaa 7234  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaa 183  Q
    ||||||||||| |||| ||||||||||  ||||||||| |||||    
T  7235 tatattagattgcctatcaaaatatttcagattgtgttgcaaaa 7278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 7125 - 7186
Alignment:
Q  10 aaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtaca 71  Q
    ||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| |||||||    
T  7125 aaatatctcaattgagtaccaaaatatattatattaagtacaaaaatatattattcagtaca 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 7457 - 7490
Alignment:
Q  296 tagtgcttacttcgttcacacaattatgtacccc 329  Q
    |||||||||||||||||||| |||||||||||||    
T  7457 tagtgcttacttcgttcacataattatgtacccc 7490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 187
Target Start/End: Complemental strand, 6864 - 6717
Alignment:
Q  42 attgagtacaaaaatatattatgc--agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaa 139  Q
    ||||||||| ||||||||||||    |||||| ||||   |||||||||||| ||||||||||||  ||||||||||||||||||   ||  ||||||||    
T  6864 attgagtactaaaatatattatattaagtacaaaaatacattattcagtacagaaatatattattaagtatcaaaatatatttcaaagcatgcactaaaa 6765  T
Q  140 tatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||| | |||||||||||||  ||||||||| |||||||||    
T  6764 tatattagattgcttaccaaaatatttcagattgtgttgcaaaatatt 6717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 23111 - 22956
Alignment:
Q  81 tattcagtacataaatatat--tattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttc 178  Q
    |||| |||||| ||||||||  ||||  ||| ||||||||||||||| ||||  || |||||||||||||||   |||||||||||||  |||||||  |    
T  23111 tattgagtacaaaaatatatcatattcagtaccaaaatatatttcagatcaagtaccaaaatatattagattatataccaaaatatttcagattgtgcac 23012  T
Q  179 caaaatattatagattacgttctaaaatattttagcaaaacatggggacaaagaaa 234  Q
     ||||||||  ||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  23011 taaaatatttcagattgcgttctaaaatattttagtaaaacttggggactaagaaa 22956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 27631 - 27555
Alignment:
Q  111 caaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttccaaaatatt 187  Q
    ||||||||||||||| ||||  |||||||||||||||||| | || ||||||||||  |||||||  ||||||||||    
T  27631 caaaatatatttcagatcaagtactaaaatatattagattgcataacaaaatatttcagattgtgcaccaaaatatt 27555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 52; Significance: 1e-20; HSPs: 6)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 59213 - 59320
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| |||   |||||||||  ||||||| | | |||||||||| | ||||| |||||    
T  59213 ttattcagtacaaaaatatattattgagtatcaaaatatatttcagatcatgtactaaaataatttagattgcgttccaaaatattctagattgcgttcc 59312  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  59313 aaaatatt 59320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 63415 - 63522
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| |||   |||||||||  ||||||| | | |||||||||| | ||||| |||||    
T  63415 ttattcagtacaaaaatatattattgagtatcaaaatatatttcagatcatgtactaaaataatttagattgcgttccaaaatattctagattgcgttcc 63514  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  63515 aaaatatt 63522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 59269 - 59347
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt-agcaaaacatggggacaaagaaaa 235  Q
    |||||| ||| ||||| ||||||||||||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||    
T  59269 aaaataatttagattgcgttccaaaatattctagattgcgttccaaaatattttcagcaaaacttggggactaagaaaa 59347  T

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Target: scaffold0070; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 63471 - 63549
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt-agcaaaacatggggacaaagaaaa 235  Q
    |||||| ||| ||||| ||||||||||||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||    
T  63471 aaaataatttagattgcgttccaaaatattctagattgcgttccaaaatattttcagcaaaacttggggactaagaaaa 63549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 59429 - 59467
Alignment:
Q  296 tagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  59429 tagtgcttacttcattcacataattatgtacccccatta 59467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 63631 - 63669
Alignment:
Q  296 tagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  63631 tagtgcttacttcattcacataattatgtacccccatta 63669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 547 - 440
Alignment:
Q  80 ttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatattttggattgtgttcc 179  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||| |||   |||||||||| ||||||| | | |||||||||| |  |||| |||||    
T  547 ttattcagtacaaaaatatattattgagtatcaaaatatatttcagatcatgtactaaaatattttagattgcattccaaaatattctatattgcgttcc 448  T
Q  180 aaaatatt 187  Q
    ||||||||    
T  447 aaaatatt 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 329
Target Start/End: Complemental strand, 332 - 298
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccc 329  Q
    ||||||||||||||||||||| |||||||||||||    
T  332 ctagtgcttacttcgttcacataattatgtacccc 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 491 - 413
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaata-ttttagcaaaacatggggacaaagaaaa 235  Q
    |||||||||| |||||  |||||||||||| || ||| ||||| |||||| |||||||||||| | ||||| |||||||    
T  491 aaaatattttagattgcattccaaaatattctatattgcgttccaaaatatttttagcaaaacttagggactaagaaaa 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 35024 - 34903
Alignment:
Q  66 agtacataaatttgttattcagtacataaatatattattgtgtatcaaaatatatttcaggtcaaacactaaaatatattagatttcctaccaaaatatt 165  Q
    |||||| |||| | ||||| |||||| ||||||||||||| ||||||||||||||||||| |||   |||||||||| ||||||| | | | ||||||||    
T  35024 agtacaaaaatatattatttagtacaaaaatatattattgagtatcaaaatatatttcagatcatgtactaaaatattttagattgcgttctaaaatatt 34925  T
Q  166 ttggattgtgttccaaaatatt 187  Q
     | ||||| |||||||||||||    
T  34924 ctagattgcgttccaaaatatt 34903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 34954 - 34876
Alignment:
Q  158 aaaatattttggattgtgttccaaaatattatagattacgttctaaaatatttt-agcaaaacatggggacaaagaaaa 235  Q
    |||||||||| ||||| |||| |||||||| |||||| ||||| |||||||||| |||||||| ||||||| |||||||    
T  34954 aaaatattttagattgcgttctaaaatattctagattgcgttccaaaatatttttagcaaaacttggggactaagaaaa 34876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 34795 - 34756
Alignment:
Q  295 ctagtgcttacttcgttcacacaattatgtacccccatta 334  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  34795 ctagtgcttacttcgttcacataattatgtacccccatta 34756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 35040 - 34981
Alignment:
Q  30 aaaatatattatattgagtacaaaaatatattatgcagtacataaatttgttattcagta 89  Q
    ||||||||| ||||||||||||||||||||||||  |||||| |||| | ||||| ||||    
T  35040 aaaatatatcatattgagtacaaaaatatattatttagtacaaaaatatattattgagta 34981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 579 - 518
Alignment:
Q  299 tgcttacttcgttcacacaattatgtacccccattatataatcttaggtcaaaaattggggtat 362  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  579 tgcttacttcgttcacacaattatgtacccg--ttatataatcttaggtcaaaaattggggtat 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 486
Target Start/End: Original strand, 52201 - 52321
Alignment:
Q  366 accttggaataagcaccttttcacctatattagatccaaatattacctctacctcgagcacaaatttacccatatttgtaataatcgatcttgtaccgtt 465  Q
    |||||||||||| |||||| ||||  ||||| || ||| |||||| |  | | |||||||||||||| ||||| |||||||| ||| |||| ||||||||    
T  52201 accttggaataaacaccttctcactgatatttgaaccatatattatccgtccttcgagcacaaattttcccatctttgtaatgatcaatctcgtaccgtt 52300  T
Q  466 acataagcccaaattttgatc 486  Q
    ||||||||||||| |||||||    
T  52301 acataagcccaaactttgatc 52321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 13361 - 13303
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  13361 caattgagtactaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 13303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 14826 - 14768
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  14826 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacagaaat 14768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 31934 - 31876
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  31934 caattgagtacaaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 31876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 7622 - 7680
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  7622 caattgagtaccaaaatatattatattaagtacaaaaatatattattcagtacaaaaat 7680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 10325 - 10281
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatatta 62  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  10325 caattgagtaccaaaatatattatattaagtacaaaaatatatta 10281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 10775 - 10717
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| | ||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  10775 caattgagtaccataatatatcatattaagtacaaaaatatattattcagtacaaaaat 10717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 21335 - 21278
Alignment:
Q  18 caattgtgtactaaaatatattatattgagtacaaaaatatattatgcagtacataaat 76  Q
    |||||| |||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||    
T  21335 caattgagtaccaaaatatattatattaagtac-aaaatatattattcagtacaaaaat 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 256571 - 256625
Alignment:
Q  9 aaaatatcccaattgtgtactaaaatatattatattgagtacaaaaatatattat 63  Q
    |||||||  |||||| || | ||||||||||||||||||||||||||| ||||||    
T  256571 aaaatatttcaattgagtgcgaaaatatattatattgagtacaaaaatgtattat 256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 7938 - 7971
Alignment:
Q  298 gtgcttacttcgttcacacaattatgtaccccca 331  Q
    |||||||||||||||||| |||||||||||||||    
T  7938 gtgcttacttcgttcacataattatgtaccccca 7971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 370
Target Start/End: Complemental strand, 10364 - 10335
Alignment:
Q  341 cttaggtcaaaaattggggtatgacacctt 370  Q
    ||||||||||||||||||||||||||||||    
T  10364 cttaggtcaaaaattggggtatgacacctt 10335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 370
Target Start/End: Complemental strand, 19789 - 19760
Alignment:
Q  341 cttaggtcaaaaattggggtatgacacctt 370  Q
    ||||||||||||||||||||||||||||||    
T  19789 cttaggtcaaaaattggggtatgacacctt 19760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 9133 - 9161
Alignment:
Q  340 tcttaggtcaaaaattggggtatgacacc 368  Q
    |||||||||||||||||||||||||||||    
T  9133 tcttaggtcaaaaattggggtatgacacc 9161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 369
Target Start/End: Complemental strand, 20704 - 20676
Alignment:
Q  341 cttaggtcaaaaattggggtatgacacct 369  Q
    |||||||||||||||||||||||||||||    
T  20704 cttaggtcaaaaattggggtatgacacct 20676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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