View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20003_low_2 (Length: 789)

Name: NF20003_low_2
Description: NF20003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20003_low_2
NF20003_low_2
[»] chr6 (53 HSPs)
chr6 (1-733)||(22702948-22703680)
chr6 (174-733)||(21401709-21402254)
chr6 (167-733)||(29490812-29491385)
chr6 (174-504)||(21396653-21396983)
chr6 (174-575)||(34375873-34376270)
chr6 (167-575)||(24191126-24191531)
chr6 (167-575)||(24192223-24192628)
chr6 (185-563)||(34142041-34142418)
chr6 (185-563)||(34154657-34155034)
chr6 (185-575)||(31981528-31981904)
chr6 (185-575)||(2817901-2818277)
chr6 (458-733)||(22697772-22698044)
chr6 (174-386)||(22698172-22698386)
chr6 (586-733)||(2817401-2817548)
chr6 (586-733)||(34142781-34142928)
chr6 (586-733)||(34155397-34155544)
chr6 (210-323)||(19478138-19478251)
chr6 (210-320)||(13605087-13605197)
chr6 (586-733)||(6727777-6727924)
chr6 (586-733)||(34376464-34376611)
chr6 (586-733)||(24190654-24190802)
chr6 (586-733)||(31983475-31983622)
chr6 (327-447)||(6728285-6728394)
chr6 (209-321)||(10642698-10642811)
chr6 (210-313)||(3901902-3902006)
chr6 (220-317)||(12182998-12183096)
chr6 (220-316)||(5600971-5601068)
chr6 (180-253)||(6728397-6728472)
chr6 (210-320)||(17281558-17281669)
chr6 (210-323)||(31476007-31476120)
chr6 (210-323)||(31495833-31495946)
chr6 (210-323)||(31501219-31501332)
chr6 (737-783)||(22699738-22699784)
chr6 (210-323)||(29325525-29325639)
chr6 (220-315)||(11570749-11570845)
chr6 (220-323)||(31515723-31515826)
chr6 (210-313)||(5740792-5740896)
chr6 (220-315)||(12406353-12406449)
chr6 (240-315)||(17964559-17964635)
chr6 (220-315)||(24589164-24589260)
chr6 (220-315)||(33687603-33687699)
chr6 (522-575)||(6728193-6728246)
chr6 (220-315)||(2700106-2700202)
chr6 (220-315)||(6407860-6407956)
chr6 (220-315)||(12688970-12689066)
chr6 (220-263)||(11428042-11428085)
chr6 (220-316)||(6112972-6113068)
chr6 (220-315)||(8747781-8747877)
chr6 (220-315)||(13736678-13736774)
chr6 (220-315)||(21309030-21309126)
chr6 (241-315)||(16836156-16836231)
chr6 (212-250)||(12662673-12662711)
chr6 (210-255)||(11956762-11956807)
[»] chr4 (74 HSPs)
chr4 (167-733)||(8984987-8985553)
chr4 (167-733)||(13700457-13701023)
chr4 (167-733)||(8979867-8980433)
chr4 (167-733)||(21299415-21299981)
chr4 (174-733)||(21304535-21305094)
chr4 (167-733)||(54991433-54991989)
chr4 (167-575)||(41393192-41393584)
chr4 (167-585)||(51019117-51019521)
chr4 (180-575)||(53797589-53797970)
chr4 (439-733)||(54990392-54990686)
chr4 (169-575)||(9763771-9764167)
chr4 (185-575)||(13710634-13711010)
chr4 (185-575)||(13695124-13695503)
chr4 (185-575)||(47046060-47046438)
chr4 (458-707)||(39999363-39999609)
chr4 (458-707)||(40004321-40004567)
chr4 (458-707)||(54343497-54343743)
chr4 (458-707)||(54348651-54348897)
chr4 (503-707)||(36359664-36359868)
chr4 (458-707)||(36354436-36354682)
chr4 (167-386)||(36359239-36359460)
chr4 (174-386)||(54348309-54348523)
chr4 (167-387)||(36354121-36354343)
chr4 (174-386)||(40003979-40004193)
chr4 (174-386)||(39999021-39999235)
chr4 (174-386)||(54343155-54343369)
chr4 (586-707)||(53798329-53798450)
chr4 (586-733)||(41393858-41394005)
chr4 (212-323)||(653035-653146)
chr4 (586-707)||(51018732-51018853)
chr4 (586-733)||(9763273-9763420)
chr4 (586-733)||(13695757-13695904)
chr4 (586-733)||(13711370-13711517)
chr4 (210-323)||(10120801-10120914)
chr4 (33-159)||(12889052-12889179)
chr4 (586-733)||(4207042-4207188)
chr4 (586-706)||(47045647-47045767)
chr4 (222-323)||(8083019-8083121)
chr4 (211-320)||(24490022-24490132)
chr4 (220-315)||(37259877-37259973)
chr4 (220-315)||(31269033-31269129)
chr4 (209-317)||(34644546-34644655)
chr4 (220-315)||(5271419-5271515)
chr4 (220-315)||(13521992-13522088)
chr4 (220-315)||(31273520-31273616)
chr4 (220-315)||(33463356-33463452)
chr4 (220-315)||(37264564-37264660)
chr4 (737-783)||(13699067-13699113)
chr4 (737-783)||(21301325-21301371)
chr4 (737-783)||(36357870-36357916)
chr4 (737-783)||(40002798-40002844)
chr4 (737-783)||(54346932-54346978)
chr4 (210-294)||(39319621-39319706)
chr4 (220-315)||(31765885-31765981)
chr4 (211-340)||(5928194-5928324)
chr4 (737-783)||(8981777-8981823)
chr4 (210-315)||(10318779-10318885)
chr4 (737-783)||(13702945-13702991)
chr4 (209-321)||(17359525-17359633)
chr4 (220-315)||(8693710-8693806)
chr4 (220-315)||(16421028-16421124)
chr4 (226-317)||(30564412-30564504)
chr4 (222-315)||(31729387-31729481)
chr4 (332-377)||(54990687-54990732)
chr4 (220-315)||(2819843-2819939)
chr4 (220-315)||(12823895-12823991)
chr4 (212-287)||(34560489-34560565)
chr4 (220-315)||(55251719-55251814)
chr4 (220-314)||(42758756-42758851)
chr4 (220-321)||(3998051-3998152)
chr4 (220-315)||(33468973-33469069)
chr4 (222-315)||(19101978-19102072)
chr4 (231-316)||(31298384-31298469)
chr4 (231-315)||(8030476-8030561)
[»] chr5 (63 HSPs)
chr5 (167-733)||(17510005-17510571)
chr5 (174-733)||(42019527-42020086)
chr5 (167-707)||(17504900-17505440)
chr5 (167-707)||(41858541-41859071)
chr5 (297-707)||(43579737-43580147)
chr5 (167-514)||(41853496-41853842)
chr5 (166-575)||(36253772-36254177)
chr5 (167-575)||(1413806-1414200)
chr5 (433-733)||(42024566-42024866)
chr5 (174-575)||(26709056-26709444)
chr5 (174-575)||(26978790-26979178)
chr5 (185-575)||(24776563-24776945)
chr5 (185-575)||(24771108-24771487)
chr5 (597-707)||(41853846-41853956)
chr5 (586-706)||(1413100-1413220)
chr5 (212-323)||(13582682-13582793)
chr5 (212-323)||(14374127-14374238)
chr5 (212-323)||(24435861-24435972)
chr5 (586-707)||(36254517-36254638)
chr5 (215-323)||(7805066-7805174)
chr5 (586-733)||(24770605-24770752)
chr5 (586-702)||(26709688-26709804)
chr5 (586-702)||(26979422-26979538)
chr5 (32-167)||(36607037-36607173)
chr5 (586-676)||(24776116-24776206)
chr5 (209-315)||(28857850-28857958)
chr5 (220-315)||(37248795-37248891)
chr5 (220-315)||(26667271-26667367)
chr5 (220-315)||(26938868-26938964)
chr5 (220-315)||(29167973-29168069)
chr5 (220-378)||(36428708-36428867)
chr5 (220-315)||(556694-556790)
chr5 (220-315)||(561466-561562)
chr5 (220-315)||(7451757-7451853)
chr5 (220-315)||(12103024-12103120)
chr5 (220-315)||(36423636-36423732)
chr5 (220-315)||(36937511-36937607)
chr5 (220-315)||(36942265-36942361)
chr5 (737-783)||(17508630-17508676)
chr5 (212-321)||(21323960-21324069)
chr5 (212-321)||(31731535-31731644)
chr5 (202-315)||(31986708-31986822)
chr5 (737-783)||(41857149-41857195)
chr5 (737-783)||(42023542-42023588)
chr5 (11-107)||(27631376-27631473)
chr5 (220-319)||(13301482-13301581)
chr5 (220-315)||(32461549-32461645)
chr5 (220-315)||(39518409-39518505)
chr5 (220-315)||(39523048-39523144)
chr5 (220-315)||(42001433-42001529)
chr5 (737-783)||(24772849-24772895)
chr5 (220-315)||(6514601-6514697)
chr5 (220-315)||(10759820-10759915)
chr5 (220-315)||(12045139-12045235)
chr5 (220-315)||(12501899-12501995)
chr5 (220-315)||(41996664-41996760)
chr5 (220-315)||(3665931-3666027)
chr5 (220-315)||(12041932-12042028)
chr5 (220-315)||(12102831-12102927)
chr5 (220-313)||(40147894-40147988)
chr5 (220-315)||(6155419-6155515)
chr5 (220-311)||(25689296-25689388)
chr5 (220-261)||(20181118-20181159)
[»] scaffold0517 (2 HSPs)
scaffold0517 (167-707)||(3510-4050)
scaffold0517 (737-783)||(2120-2166)
[»] chr1 (53 HSPs)
chr1 (165-707)||(37409145-37409687)
chr1 (167-707)||(37404026-37404564)
chr1 (167-707)||(27716390-27716930)
chr1 (200-707)||(11250731-11251228)
chr1 (235-733)||(27711319-27711836)
chr1 (180-575)||(5730065-5730446)
chr1 (185-575)||(3584566-3584942)
chr1 (167-460)||(11387666-11387978)
chr1 (167-585)||(48246427-48246823)
chr1 (504-707)||(34317840-34318043)
chr1 (458-707)||(36684270-36684516)
chr1 (180-473)||(5724939-5725221)
chr1 (174-386)||(36684644-36684858)
chr1 (168-379)||(34318160-34318373)
chr1 (586-733)||(5725365-5725512)
chr1 (586-733)||(3585301-3585448)
chr1 (586-732)||(5730771-5730917)
chr1 (212-323)||(10106095-10106206)
chr1 (210-323)||(39747157-39747270)
chr1 (586-707)||(48245998-48246119)
chr1 (212-323)||(13890805-13890916)
chr1 (210-323)||(38734265-38734378)
chr1 (210-321)||(26651160-26651271)
chr1 (210-323)||(5602417-5602530)
chr1 (210-323)||(14582089-14582202)
chr1 (648-707)||(50959010-50959069)
chr1 (220-315)||(10135455-10135551)
chr1 (210-323)||(19422866-19422983)
chr1 (212-321)||(41097946-41098055)
chr1 (220-315)||(51041463-51041557)
chr1 (737-783)||(27715000-27715046)
chr1 (220-315)||(19799013-19799109)
chr1 (220-315)||(23192817-23192913)
chr1 (220-315)||(25188272-25188368)
chr1 (220-321)||(33055038-33055139)
chr1 (220-315)||(16035607-16035703)
chr1 (220-315)||(16649613-16649708)
chr1 (224-315)||(33301180-33301272)
chr1 (220-315)||(40165979-40166075)
chr1 (220-315)||(47451225-47451321)
chr1 (220-315)||(47455386-47455482)
chr1 (737-783)||(37405908-37405954)
chr1 (167-208)||(27711274-27711315)
chr1 (215-255)||(8267891-8267931)
chr1 (220-315)||(10140088-10140184)
chr1 (85-137)||(17031981-17032033)
chr1 (737-783)||(5728674-5728721)
chr1 (220-263)||(25855170-25855213)
chr1 (220-293)||(3094113-3094187)
chr1 (220-283)||(4632958-4633022)
chr1 (220-315)||(12259995-12260091)
chr1 (222-312)||(39588370-39588461)
chr1 (220-253)||(16832100-16832133)
[»] chr3 (80 HSPs)
chr3 (167-700)||(17368666-17369199)
chr3 (174-707)||(55128743-55129276)
chr3 (185-575)||(54270609-54270986)
chr3 (185-575)||(34128923-34129299)
chr3 (185-575)||(4117345-4117730)
chr3 (180-575)||(3482166-3482560)
chr3 (185-575)||(17357801-17358179)
chr3 (180-575)||(3476699-3477083)
chr3 (174-575)||(10321396-10321784)
chr3 (458-733)||(20090191-20090463)
chr3 (458-733)||(20095316-20095588)
chr3 (458-707)||(15762585-15762831)
chr3 (458-707)||(15767746-15767992)
chr3 (167-386)||(30341773-30341993)
chr3 (178-386)||(20090591-20090801)
chr3 (178-386)||(20095716-20095926)
chr3 (174-386)||(15762959-15763173)
chr3 (174-386)||(15768120-15768334)
chr3 (185-323)||(17364028-17364168)
chr3 (586-733)||(3481649-3481796)
chr3 (586-707)||(34128437-34128558)
chr3 (586-707)||(17358566-17358686)
chr3 (586-707)||(30338126-30338247)
chr3 (586-733)||(30341204-30341351)
chr3 (586-707)||(54271312-54271433)
chr3 (210-323)||(13022017-13022130)
chr3 (210-323)||(33089335-33089448)
chr3 (586-676)||(3476249-3476339)
chr3 (586-676)||(4117007-4117097)
chr3 (210-323)||(38436983-38437096)
chr3 (210-323)||(53119517-53119630)
chr3 (210-323)||(20810362-20810475)
chr3 (210-323)||(26962049-26962162)
chr3 (209-316)||(2617255-2617363)
chr3 (220-317)||(21494300-21494398)
chr3 (220-315)||(758368-758464)
chr3 (220-315)||(23666123-23666219)
chr3 (220-315)||(24038371-24038467)
chr3 (220-315)||(39775728-39775824)
chr3 (220-315)||(8069677-8069772)
chr3 (212-321)||(10586177-10586286)
chr3 (220-315)||(3672583-3672679)
chr3 (220-315)||(3692615-3692711)
chr3 (220-315)||(14438695-14438791)
chr3 (220-315)||(18467222-18467318)
chr3 (220-315)||(20520051-20520147)
chr3 (220-315)||(49971424-49971520)
chr3 (222-299)||(1688902-1688980)
chr3 (737-783)||(3478439-3478485)
chr3 (737-783)||(15764511-15764557)
chr3 (737-783)||(17362634-17362680)
chr3 (737-783)||(17367276-17367322)
chr3 (737-783)||(20092142-20092188)
chr3 (209-317)||(27605133-27605242)
chr3 (487-575)||(30338506-30338595)
chr3 (220-315)||(7571218-7571314)
chr3 (221-315)||(8883168-8883263)
chr3 (220-266)||(25726843-25726889)
chr3 (213-321)||(795399-795508)
chr3 (220-315)||(3033641-3033737)
chr3 (220-315)||(3418992-3419088)
chr3 (224-315)||(12112641-12112733)
chr3 (220-315)||(18472005-18472100)
chr3 (220-315)||(29350237-29350333)
chr3 (54-108)||(49359192-49359247)
chr3 (245-313)||(26706808-26706877)
chr3 (220-315)||(32474680-32474774)
chr3 (220-315)||(8887927-8888023)
chr3 (220-315)||(12965873-12965969)
chr3 (212-294)||(31002689-31002771)
chr3 (212-322)||(45904442-45904552)
chr3 (210-272)||(6024109-6024171)
chr3 (237-310)||(25023929-25024003)
chr3 (247-315)||(1741109-1741178)
chr3 (220-315)||(29715641-29715737)
chr3 (220-263)||(27708875-27708918)
chr3 (524-575)||(30341720-30341771)
chr3 (220-255)||(53358242-53358277)
chr3 (505-550)||(10321816-10321861)
chr3 (274-315)||(27708988-27709029)
[»] chr2 (50 HSPs)
chr2 (167-733)||(40392266-40392832)
chr2 (167-707)||(40518075-40518620)
chr2 (167-575)||(28751483-28751877)
chr2 (458-707)||(42728175-42728421)
chr2 (503-706)||(42723007-42723210)
chr2 (458-707)||(44096596-44096842)
chr2 (516-707)||(44754161-44754352)
chr2 (516-707)||(44759327-44759518)
chr2 (516-704)||(40519929-40520122)
chr2 (174-386)||(42723380-42723594)
chr2 (174-386)||(42728549-42728763)
chr2 (166-386)||(44096246-44096468)
chr2 (174-386)||(44754525-44754739)
chr2 (174-386)||(44759691-44759905)
chr2 (586-733)||(4162895-4163042)
chr2 (586-733)||(28751021-28751168)
chr2 (396-575)||(4163331-4163507)
chr2 (210-320)||(42914632-42914742)
chr2 (33-159)||(36594228-36594355)
chr2 (220-318)||(5089278-5089376)
chr2 (220-315)||(30658262-30658358)
chr2 (220-315)||(9180724-9180820)
chr2 (220-315)||(10160724-10160820)
chr2 (220-315)||(1934993-1935089)
chr2 (220-315)||(9189803-9189899)
chr2 (220-315)||(18344430-18344526)
chr2 (220-321)||(11658882-11658984)
chr2 (737-783)||(42724940-42724986)
chr2 (737-783)||(44756092-44756138)
chr2 (212-292)||(19538377-19538458)
chr2 (212-315)||(6297886-6297989)
chr2 (220-315)||(30650928-30651024)
chr2 (212-292)||(28854996-28855077)
chr2 (220-315)||(12796924-12797020)
chr2 (220-315)||(19578414-19578510)
chr2 (220-315)||(19892466-19892562)
chr2 (220-315)||(25478297-25478393)
chr2 (220-315)||(25497325-25497421)
chr2 (220-315)||(31326738-31326834)
chr2 (179-218)||(4163525-4163564)
chr2 (220-321)||(39542901-39543004)
chr2 (220-313)||(29677380-29677474)
chr2 (220-316)||(160040-160137)
chr2 (233-317)||(28945181-28945266)
chr2 (220-315)||(7737851-7737947)
chr2 (224-315)||(35601925-35602017)
chr2 (220-311)||(42926763-42926857)
chr2 (216-264)||(22844814-22844862)
chr2 (210-315)||(29907368-29907470)
chr2 (210-311)||(39542509-39542611)
[»] chr7 (63 HSPs)
chr7 (180-575)||(2234384-2234765)
chr7 (167-575)||(16539166-16539559)
chr7 (167-575)||(16626103-16626496)
chr7 (174-575)||(21080793-21081182)
chr7 (180-575)||(42571904-42572286)
chr7 (185-575)||(12934363-12934738)
chr7 (180-575)||(43892816-43893210)
chr7 (185-575)||(17495367-17495744)
chr7 (185-575)||(17557470-17557847)
chr7 (185-563)||(32212419-32212784)
chr7 (458-733)||(33238296-33238568)
chr7 (180-575)||(19309365-19309746)
chr7 (458-707)||(47994094-47994340)
chr7 (503-733)||(33243515-33243745)
chr7 (458-707)||(47999269-47999515)
chr7 (180-411)||(47177024-47177256)
chr7 (174-386)||(33237954-33238168)
chr7 (174-386)||(33243131-33243345)
chr7 (178-386)||(47998931-47999141)
chr7 (176-386)||(47993754-47993966)
chr7 (586-733)||(21080321-21080468)
chr7 (586-707)||(2233978-2234099)
chr7 (166-287)||(22857715-22857836)
chr7 (586-733)||(32211965-32212112)
chr7 (586-733)||(42572600-42572747)
chr7 (586-707)||(17496100-17496221)
chr7 (586-707)||(17556993-17557114)
chr7 (586-733)||(12935084-12935231)
chr7 (586-733)||(19308876-19309023)
chr7 (210-323)||(9973452-9973565)
chr7 (586-733)||(47176496-47176643)
chr7 (210-323)||(24528344-24528457)
chr7 (222-323)||(33226416-33226517)
chr7 (593-707)||(16538699-16538813)
chr7 (593-707)||(16626849-16626963)
chr7 (586-733)||(43893542-43893689)
chr7 (61-167)||(5888351-5888458)
chr7 (210-323)||(28292496-28292607)
chr7 (654-733)||(47544749-47544828)
chr7 (220-315)||(4579507-4579603)
chr7 (220-313)||(3357634-3357728)
chr7 (212-321)||(27256234-27256343)
chr7 (211-315)||(8076040-8076145)
chr7 (220-315)||(9650967-9651063)
chr7 (220-315)||(23246933-23247029)
chr7 (220-315)||(23866067-23866163)
chr7 (220-315)||(26341198-26341294)
chr7 (88-159)||(36935090-36935161)
chr7 (737-783)||(33241732-33241778)
chr7 (737-783)||(47997529-47997575)
chr7 (211-315)||(12254069-12254174)
chr7 (487-575)||(47176904-47176993)
chr7 (220-315)||(4930232-4930328)
chr7 (220-315)||(13314236-13314332)
chr7 (220-315)||(44423137-44423233)
chr7 (220-315)||(10388367-10388461)
chr7 (220-315)||(8268292-8268388)
chr7 (220-315)||(44510677-44510773)
chr7 (220-317)||(19640298-19640395)
chr7 (212-317)||(40865351-40865456)
chr7 (220-315)||(27238241-27238337)
chr7 (224-298)||(42627214-42627289)
chr7 (220-266)||(16372397-16372443)
[»] scaffold0594 (2 HSPs)
scaffold0594 (167-575)||(8962-9356)
scaffold0594 (586-733)||(8534-8681)
[»] scaffold0060 (3 HSPs)
scaffold0060 (165-585)||(36956-37361)
scaffold0060 (586-644)||(37654-37712)
scaffold0060 (212-321)||(47851-47960)
[»] chr8 (61 HSPs)
chr8 (174-575)||(21643835-21644222)
chr8 (167-585)||(24884660-24885064)
chr8 (185-489)||(17955626-17955919)
chr8 (185-575)||(43998984-43999360)
chr8 (174-455)||(42514245-42514515)
chr8 (458-707)||(32010820-32011066)
chr8 (458-707)||(32015994-32016240)
chr8 (478-733)||(2165394-2165650)
chr8 (167-386)||(32015645-32015866)
chr8 (301-575)||(21643395-21643652)
chr8 (586-733)||(43998546-43998693)
chr8 (586-733)||(17955134-17955281)
chr8 (586-707)||(24885324-24885445)
chr8 (210-323)||(19430004-19430117)
chr8 (210-323)||(19435506-19435619)
chr8 (210-323)||(19566153-19566266)
chr8 (210-323)||(19571655-19571768)
chr8 (220-323)||(33616719-33616822)
chr8 (408-575)||(21641520-21641684)
chr8 (408-575)||(21641895-21642059)
chr8 (408-575)||(21642270-21642434)
chr8 (408-575)||(21643020-21643184)
chr8 (586-733)||(42513848-42513995)
chr8 (408-575)||(21642645-21642809)
chr8 (210-323)||(31030518-31030631)
chr8 (33-159)||(20519763-20519890)
chr8 (33-159)||(38148632-38148759)
chr8 (586-676)||(21641184-21641273)
chr8 (167-277)||(32010483-32010595)
chr8 (210-316)||(13584340-13584454)
chr8 (220-315)||(31449866-31449962)
chr8 (220-315)||(38182237-38182333)
chr8 (220-315)||(44925923-44926019)
chr8 (737-783)||(21645574-21645620)
chr8 (737-783)||(32014255-32014301)
chr8 (220-315)||(15875668-15875764)
chr8 (220-315)||(19166633-19166729)
chr8 (220-315)||(40125885-40125981)
chr8 (332-386)||(32010605-32010659)
chr8 (220-315)||(17025934-17026030)
chr8 (220-315)||(17556426-17556522)
chr8 (220-315)||(18876367-18876462)
chr8 (220-315)||(24090626-24090722)
chr8 (220-315)||(33416546-33416642)
chr8 (504-567)||(42514182-42514245)
chr8 (220-313)||(1807471-1807565)
chr8 (218-315)||(2965627-2965725)
chr8 (220-321)||(37771711-37771812)
chr8 (220-315)||(43302718-43302815)
chr8 (220-315)||(17953873-17953969)
chr8 (220-315)||(34118465-34118561)
chr8 (220-315)||(36683578-36683674)
chr8 (220-263)||(40130739-40130782)
chr8 (222-315)||(1910969-1911063)
chr8 (220-313)||(28559656-28559750)
chr8 (220-287)||(34818726-34818794)
chr8 (215-317)||(25367991-25368093)
chr8 (220-293)||(4238337-4238411)
chr8 (220-293)||(4243076-4243150)
chr8 (98-139)||(9518434-9518476)
chr8 (220-253)||(15951584-15951617)
[»] scaffold0166 (5 HSPs)
scaffold0166 (180-575)||(13493-13877)
scaffold0166 (185-575)||(18946-19328)
scaffold0166 (586-733)||(12986-13133)
scaffold0166 (586-676)||(18500-18590)
scaffold0166 (737-783)||(15233-15279)
[»] scaffold0014 (5 HSPs)
scaffold0014 (458-707)||(31839-32085)
scaffold0014 (167-386)||(31492-31711)
scaffold0014 (458-707)||(26667-26913)
scaffold0014 (174-386)||(26325-26539)
scaffold0014 (737-783)||(30102-30148)
[»] scaffold0055 (2 HSPs)
scaffold0055 (458-707)||(3318-3564)
scaffold0055 (167-386)||(3003-3224)
[»] scaffold0052 (2 HSPs)
scaffold0052 (458-707)||(80971-81217)
scaffold0052 (167-386)||(81311-81532)
[»] scaffold0011 (2 HSPs)
scaffold0011 (222-323)||(1567-1668)
scaffold0011 (210-323)||(7036-7149)
[»] scaffold0132 (2 HSPs)
scaffold0132 (210-322)||(2765-2877)
scaffold0132 (210-322)||(10725-10837)
[»] scaffold0067 (1 HSPs)
scaffold0067 (210-315)||(33968-34074)
[»] scaffold0352 (1 HSPs)
scaffold0352 (220-315)||(7103-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (220-315)||(9887-9983)
[»] scaffold0002 (1 HSPs)
scaffold0002 (220-315)||(4073-4169)
[»] scaffold0165 (1 HSPs)
scaffold0165 (737-783)||(15542-15588)
[»] scaffold0061 (1 HSPs)
scaffold0061 (212-321)||(45776-45885)
[»] scaffold0020 (1 HSPs)
scaffold0020 (220-321)||(1220-1321)
[»] scaffold0017 (1 HSPs)
scaffold0017 (212-321)||(152902-153011)
[»] scaffold0045 (1 HSPs)
scaffold0045 (220-315)||(83065-83161)
[»] scaffold0012 (1 HSPs)
scaffold0012 (220-315)||(166086-166182)
[»] scaffold0057 (1 HSPs)
scaffold0057 (226-315)||(35639-35729)
[»] scaffold0018 (1 HSPs)
scaffold0018 (232-320)||(171711-171798)


Alignment Details
Target: chr6 (Bit Score: 652; Significance: 0; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 652; E-Value: 0
Query Start/End: Original strand, 1 - 733
Target Start/End: Complemental strand, 22703680 - 22702948
Alignment:
Q  1 cgtttctaaactaaaacctttgttctctctctaaaaccacacctcggttttcgcttttcctcaaatccaacactattcatcacgatgtagatccaaatgg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703680 cgtttctaaacaaaaacctttgttctctctctaaaaccacacctcggttttcgcttttcctcaaatccaacactattcatcacgatgtagatccaaatgg 22703581  T
Q  101 tggtggtgcgacgaggcgcagcctccgcatcacctcatctccggcgtccctcatcctattcagtagtgttgtatttgtaatttgaaaattacgacagagc 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22703580 tggtggtgcgacgaggcgcagcctccgcatcacctcacctccggcgtccctcatcctattcggtagtgttgtatttgtaatttgaaaattacgacagagc 22703481  T
Q  201 tttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgt 300  Q
    |||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703480 tttgaaactattaccggggtgagtcacgattatgtcgttttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgt 22703381  T
Q  301 ctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttc 400  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  22703380 ctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgtcagaaatcactcgagaataacacctcaatatggttttcgaaaagtttc 22703281  T
Q  401 gaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagagag 500  Q
     ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22703280 aaaaaaccactctaatatggtacgtagaccactcaataaaccaaagaaggaggaaagaaagaacggttcgtcaacacaaaccgcgggagggagaagagag 22703181  T
Q  501 gagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtg 600  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703180 gagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtg 22703081  T
Q  601 atctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtata 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703080 atctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtata 22702981  T
Q  701 ctccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||       |||||||||||||||||||    
T  22702980 ctccaagtttttttcattatacactagtgttcc 22702948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 174 - 733
Target Start/End: Original strand, 21401709 - 21402254
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21401709 tttgtaatttgaaaattacgatagagctttgaaactattaccgggatgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 21401808  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    || |||||||||||||||||||||||||||||||||               | |||||||||||||||||||||||||||||||||||||||||||||||    
T  21401809 tggaaggtagactagcaaccgcgccgtctccaggatt--------------ctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 21401894  T
Q  374 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21401895 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 21401994  T
Q  474 acataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaattta 573  Q
    ||| ||||||| ||||||||||||||||||||||||||| | |||||||||||||||| |||||| |||||| ||||||||||||| |||||||||||||    
T  21401995 acacaaaccgcaggagggagaagagaggagagaaaaccaaagaagagtattcgattcttagtttttgagtgatgaatactattcccaagctctcaattta 21402094  T
Q  574 taaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattc 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402095 taaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattc 21402194  T
Q  674 caaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||| |||||||||||       |||||||||||||||||||    
T  21402195 caaaggctccacaaactcactactatactccaagtttttttcattatacactagtgttcc 21402254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Complemental strand, 29491385 - 29490812
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29491385 tgttgtttgtgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaagtcgctttctttaagacgtttcgcggcactacc 29491286  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  29491285 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 29491186  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcga-aaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacg 465  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29491185 gaataacacctcaatatggttttcgaaaagtttcgaaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaaaaaagaacg 29491086  T
Q  466 gttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaa-gaatac----tatt--cc 558  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||||||||||  || ||    ||||        
T  29491085 gttcgtcaacacaaaccgcgggagggagaagagaggagataaaatcagagaagagtatttgattctcagttttggagtgaaccaaaactgagtatttaaa 29490986  T
Q  559 cgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatc 658  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29490985 cca-ctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatc 29490887  T
Q  659 cttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||    
T  29490886 cttgtgtttacattccaaaagctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 29490812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 174 - 504
Target Start/End: Original strand, 21396653 - 21396983
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396653 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 21396752  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  21396753 tgcaaggtagactagcaaccgcgccatctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 21396852  T
Q  374 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396853 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 21396952  T
Q  474 acataaaccgcgggagggagaagagaggaga 504  Q
    ||| |||||||||||||||||||||||||||    
T  21396953 acacaaaccgcgggagggagaagagaggaga 21396983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 174 - 575
Target Start/End: Original strand, 34375873 - 34376270
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34375873 tttgtaatttgaaaattacgacggagttttgaaactattatcggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactacctaagttg 34375972  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  34375973 tgcaacgtagattagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 34376072  T
Q  374 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 473  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||||  ||||||||||||||||    
T  34376073 acctcagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgcagaccactcgagaaaccaaagagggaggaagaaaagaacggttcgtca 34376171  T
Q  474 acataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaattt 572  Q
    ||| |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  34376172 acacaaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctattt 34376267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 167 - 575
Target Start/End: Complemental strand, 24191531 - 24191126
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctt-tgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 265  Q
    |||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24191531 tgttgtttttgtaatttgaaa-ttacgacagagcttatgaagctattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 24191433  T
Q  266 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcg 365  Q
    || |||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||| ||||    
T  24191432 ctgagttgtgcaaggtagactagtaaccgcgccgtctccaggataaaacagcccagattctaactgtaagattaaaggctgcactgccagaaatctctcg 24191333  T
Q  366 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaac 464  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||| |||    
T  24191332 agaataacacctcagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagagggaggaaagaaaaaaac 24191234  T
Q  465 ggttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagc 563  Q
    |||||||||||| |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  24191233 ggttcgtcaacacaaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagc 24191138  T
Q  564 tctcaatttata 575  Q
    |||| |||||||    
T  24191137 tctctatttata 24191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 167 - 575
Target Start/End: Complemental strand, 24192628 - 24192223
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctt-tgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 265  Q
    |||||| |||| ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192628 tgttgtttttgaaatttgaaa-ttacgacagagcttatgaagctattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 24192530  T
Q  266 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcg 365  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||| ||||    
T  24192529 ctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaagattaaaggctgcactgccagaaatctctcg 24192430  T
Q  366 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaac 464  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||| |||    
T  24192429 agaataacacctcagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagagggaggaaagaaaaaaac 24192331  T
Q  465 ggttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagc 563  Q
    |||||||||||| |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  24192330 ggttcgtcaacacaaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagc 24192235  T
Q  564 tctcaatttata 575  Q
    |||| |||||||    
T  24192234 tctctatttata 24192223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 185 - 563
Target Start/End: Original strand, 34142041 - 34142418
Alignment:
Q  185 aaaattacgacagagcttt----gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaagg 280  Q
    ||||||||||||||||| |    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  34142041 aaaattacgacagagctatatatgaaactgttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaagttgtgcaagg 34142140  T
Q  281 tagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaa 380  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  34142141 tagactagcaaccgcgccgtctccaggataaaacagcccagattcaaactgtacgattaaaggctgcactgctagaaatcgctcgagaataacacctcag 34142240  T
Q  381 tatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacggttcgtcaacataa 479  Q
    ||||| |||||||||  |||||||||||||||||||||||| || |||| |||||| |||||||||||||||| ||| ||||||||||||||||||| ||    
T  34142241 tatgg-tttcgaaaa--ttcgaaaaaccactctaatatggttcgcagacaactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacacaa 34142337  T
Q  480 accgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagc 563  Q
    |||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||    
T  34142338 acc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatccaattcccgagc 34142418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 185 - 563
Target Start/End: Original strand, 34154657 - 34155034
Alignment:
Q  185 aaaattacgacagagcttt----gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaagg 280  Q
    ||||||||||||||||| |    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  34154657 aaaattacgacagagctatatatgaaactgttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaagttgtgcaagg 34154756  T
Q  281 tagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaa 380  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  34154757 tagactagcaaccgcgccgtctccaggataaaacagcccagattcaaactgtacgattaaaggctgcactgctagaaatcgctcgagaataacacctcag 34154856  T
Q  381 tatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacggttcgtcaacataa 479  Q
    ||||| |||||||||  |||||||||||||||||||||||| || |||| |||||| |||||||||||||||| ||| ||||||||||||||||||| ||    
T  34154857 tatgg-tttcgaaaa--ttcgaaaaaccactctaatatggttcgcagacaactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacacaa 34154953  T
Q  480 accgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagc 563  Q
    |||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||    
T  34154954 acc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatccaattcccgagc 34155034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 31981528 - 31981904
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31981528 aaaattacgacagagcttcgaaa---ttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtaga 31981624  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgc--caactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc-aat 381  Q
    |||||||||||||||||||||||||||||||| |||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31981625 ctagcaaccgcgccgtctccaggataaaacaggccagattctaaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaaat 31981724  T
Q  382 atggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaac 481  Q
    |||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||   ||||||||||||||||||| ||||    
T  31981725 atg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggaggaggaaaagaacggttcgtcaacacaaac 31981813  T
Q  482 cgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |    |||||||| ||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||    
T  31981814 c----gagggagatgagaaggggagaaaaccagagaagagtattcgattctcggttttggagtgaagaataccaatcccgagctctctatttata 31981904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 2818277 - 2817901
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  2818277 aaaattacgacagagctttgaaactattaccgaggtgaatcacgaccaggtcgctttctttaagacgttttgcgttactacctaagttgtgcaaggtaga 2818178  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    |||| |||||||||||||||||||||||||||| ||||| |   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2818177 ctagaaaccgcgccgtctccaggataaaacagctcagattctttctgtacgattaaaggttgcactgccagaaatcgctcgagaataacacctcaatatg 2818078  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgc 484  Q
               ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||  ||||||||||||||||||| |||||      
T  2818077 -----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaacaaggaggaagaaaagaacggttcgtcaacacaaacc-- 2817991  T
Q  485 gggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
      |||||||| ||| ||| |||||||||||| ||||| ||||||||||  |||||||||| ||||||   |||||||||||||| |||||||    
T  2817990 --gagggagatgagaaggggagaaaaccagagaagaggattcgattcttggttttggagtaaagaatctcattcccgagctctctatttata 2817901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 458 - 733
Target Start/End: Complemental strand, 22698044 - 22697772
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22698044 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 22697948  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697947 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 22697848  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  22697847 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 22697772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 22698386 - 22698172
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  22698386 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 22698287  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  22698286 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 22698187  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  22698186 acacctcgatatggt 22698172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 2817548 - 2817401
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817548 ctactagagtgtgtgatctacccaatgtgggacattaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 2817449  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  2817448 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 2817401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 34142781 - 34142928
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34142781 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 34142880  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  34142881 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 34142928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 34155397 - 34155544
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34155397 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 34155496  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  34155497 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 34155544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 19478138 - 19478251
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||    
T  19478138 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccacgat 19478237  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  19478238 aaaacagcccagat 19478251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 13605197 - 13605087
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  13605197 attaccgggttgagtcacgactaggttgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 13605098  T
Q  310 aaaacagccca 320  Q
    |||||||||||    
T  13605097 aaaacagccca 13605087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 6727924 - 6727777
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  6727924 ctactagagtgtgtgatctacccaatgtggaacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 6727825  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  6727824 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 6727777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 34376464 - 34376611
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  34376464 ctactagagtgtgttatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 34376563  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  34376564 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 34376611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 24190802 - 24190654
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaa-ttttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 684  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||||     
T  24190802 ctactagagtgtgtgatctacccaatgtgggacataaaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcct 24190703  T
Q  685 caaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    || |   ||||||||||||||||       || ||||||||||||||||    
T  24190702 cataacaactagtatactccaagtttttgccaatatacactagtgttcc 24190654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 31983475 - 31983622
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| | |||| |    
T  31983475 ctactagagtgtgtgatctacccaatgcgggacataaaattttcaattcacactttacactaatttctacatcattgtgtttacattccaatgtctcctc 31983574  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  31983575 ataaaaactagtatactccaagtttttgccaatatacactagtgttcc 31983622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 6728394 - 6728285
Alignment:
Q  327 aactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgta 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||           |||||||||||||| |||||||||| |||||    
T  6728394 aactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcagtatg-----------gtttcgaaaaaccagtctaatatggcacgta 6728306  T
Q  427 gaccactcgataaaccaaaga 447  Q
    |||||||||| ||||||||||    
T  6728305 gaccactcgagaaaccaaaga 6728285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 10642698 - 10642811
Alignment:
Q  209 tattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccagg 307  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||| || | |||||||||||||||||| ||||||||||| |||| ||    
T  10642698 tattaccgggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcccgg 10642797  T
Q  308 ataaaacagcccag 321  Q
    |||||||| |||||    
T  10642798 ataaaacatcccag 10642811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 3901902 - 3902006
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagga 308  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||| || ||||||||||| ||||||||    
T  3901902 attaccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccagga 3902001  T
Q  309 taaaa 313  Q
    |||||    
T  3902002 taaaa 3902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 220 - 317
Target Start/End: Complemental strand, 12183096 - 12182998
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 317  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| || |||||| ||||||||||    
T  12183096 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataaaacagc 12182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 5601068 - 5600971
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 316  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  || ||||| |||||||| || ||||||||||| ||||| ||||||||||    
T  5601068 tgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctccaagataaaacag 5600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 6728472 - 6728397
Alignment:
Q  180 atttgaaaattacgacagagcttt--gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtt 253  Q
    |||| |||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6728472 atttaaaaattacgatagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 210 - 320
Target Start/End: Complemental strand, 17281669 - 17281558
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccagga 308  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||||||| ||  | ||||| ||||||||||| |||||||  || ||  ||||    
T  17281669 attaccgggttgagtcacgagcatgtcgctttctttaagacgtttcgcggcactacccgtatttgtgtaaggtagactaacaaccgcatcgcctttagga 17281570  T
Q  309 taaaacagccca 320  Q
    ||||||||||||    
T  17281569 taaaacagccca 17281558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 31476120 - 31476007
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||| ||||| |||  |||||||| |||| |||||||||  |||||| ||||||||  |||| ||||| |||||||||||||||    
T  31476120 attatcgggttgagtcacgatcaggttgctcactttaagatgtttggcggcactatttaagttatgcaaggtcaactaacaaccacgccgtctccaggat 31476021  T
Q  310 aaaacagcccagat 323  Q
    |||||||| |||||    
T  31476020 aaaacagctcagat 31476007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 31495946 - 31495833
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||| ||||| |||  |||||| | |||| |||||||||| ||| || ||||| ||| |||| ||||| |||||||||||||||    
T  31495946 attatcgggttgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggat 31495847  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  31495846 aaaacagcccagat 31495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 31501332 - 31501219
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||| ||||| |||  |||||| | |||| |||||||||| ||| || ||||| ||| |||| ||||| |||||||||||||||    
T  31501332 attatcgggttgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggat 31501233  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  31501232 aaaacagcccagat 31501219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 22699784 - 22699738
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22699784 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 22699738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 29325525 - 29325639
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagga 308  Q
    ||||||||| |||||||||| || |||||| | ||||||||||||  || ||||||||||| ||||||||||||||||| |||| | | || ||||| ||    
T  29325525 attaccgggttgagtcacgatcaagtcgctctttttaagacgttttacgacactacctaagtttgtgcaaggtagactaacaactgtgacgcctccaaga 29325624  T
Q  309 taaaacagcccagat 323  Q
    ||||| |||||||||    
T  29325625 taaaatagcccagat 29325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 11570845 - 11570749
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||| | ||||| ||||| |||||||||||||||    
T  11570845 tgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaca 11570749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 31515826 - 31515723
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccc 319  Q
    |||||||||| ||||| |||  |||||| | |||| |||||||||| ||| || ||||| ||| |||| ||||| ||||||||||||||||||||||||     
T  31515826 tgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggataaaacagcct 31515727  T
Q  320 agat 323  Q
    ||||    
T  31515726 agat 31515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 5740896 - 5740792
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagga 308  Q
    ||||||||| ||||||| ||| ||||| || ||||||||||||||| || ||||||  ||| ||||||||||| ||||| ||||||||||| | | ||||    
T  5740896 attaccgggttgagtcatgactaggtcactctctttaagacgtttcacgacactactcaagtttgtgcaaggtggactatcaaccgcgccgccactagga 5740797  T
Q  309 taaaa 313  Q
    |||||    
T  5740796 taaaa 5740792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 12406449 - 12406353
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||| ||||||||||| |||| | ||| ||||||||||||| |||||| ||| | ||||| || || |||||||||    
T  12406449 tgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgccgccttcatgataaaaca 12406353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 17964635 - 17964559
Alignment:
Q  240 ttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||||||| ||||||| || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  17964635 ttctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 17964559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 24589260 - 24589164
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||| ||| ||||| ||||||| |||||||| | ||||  || || ||||||||| ||||||| ||||| |||||||||||||||||||||    
T  24589260 tgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccacgccgtctccaggataaaaca 24589164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 33687699 - 33687603
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||| || ||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| |||||  ||||||||||||||||||||    
T  33687699 tgagttaccaccaggtcgctctctttaagacgtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccaggataaaaca 33687603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 575
Target Start/End: Complemental strand, 6728246 - 6728193
Alignment:
Q  522 attcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  6728246 attcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 6728193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 2700202 - 2700106
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||   | || |||||||||  |||||| ||||| |||||  ||||||||||||||    
T  2700202 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccacgccgcttccaggataaaaca 2700106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 6407956 - 6407860
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||| ||||||||| |||| ||||||||||| ||||||  || || |||| ||| | |||||| ||||| ||||| |||||||||||||||    
T  6407956 tgagtcacgatcaggtcgctctcttgaagacgtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccaggataaaaca 6407860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 12688970 - 12689066
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||| ||||||||| || |||||||||||||| | |  ||| || ||  |||||||||| |||||| ||||| |||||||||||||||||||||    
T  12688970 tgagtcatgaccaggtcactctctttaagacgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtctccaggataaaaca 12689066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 11428042 - 11428085
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 263  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  11428042 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 11428085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 6113068 - 6112972
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 316  Q
    |||||||||| ||||| |||||||||||||||  || || || ||||| || |||||||||||||||||  ||||| | || ||||||||||||||||    
T  6113068 tgagtcacgatcaggttgctttctttaagacgaatcacgacattacctgaaattgtgcaaggtagactaataaccgtg-cgcctccaggataaaacag 6112972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 8747781 - 8747877
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| ||||||||||||| || | ||||  || || |||||||||  || ||| ||||  ||||| |||||||||||||||    
T  8747781 tgagtcacgaccaggtcgctctctttaagacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaacgccgcctccaggataaaaca 8747877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 13736774 - 13736678
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||| | |||||||| || |||||| ||||||||| |||||| |||||  |||||||||| |||||| ||||| | | | |||||||||||||||    
T  13736774 tgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacactgcctccaggataaaaca 13736678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 21309030 - 21309126
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| ||||  ||||| |||||||||||||||  |||||| || ||  |||||||| | |||||| ||||| ||||| |||||||||||||||    
T  21309030 tgagtcactaccatatcgctctctttaagacgtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccaggataaaaca 21309126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 315
Target Start/End: Complemental strand, 16836231 - 16836156
Alignment:
Q  241 tctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||| |||||| || ||  |||| ||||| |||||| ||||| ||||| |||||||||||||||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataaaaca 16836156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 212 - 250
Target Start/End: Complemental strand, 12662711 - 12662673
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagac 250  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  12662711 taccgggttgagtcacaaccaggtcgctttctttaagac 12662673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 11956807 - 11956762
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 255  Q
    |||| |||| ||||||| |||||||||||| |||||||||||||||    
T  11956807 attatcgggttgagtcatgaccaggtcgctctctttaagacgtttc 11956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 526; Significance: 0; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Complemental strand, 8985553 - 8984987
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985553 tgttgtgtttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 8985454  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  8985453 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 8985354  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985353 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 8985254  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985253 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctct 8985154  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985153 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 8985054  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  8985053 tacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 8984987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Original strand, 13700457 - 13701023
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700457 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 13700556  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  13700557 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 13700656  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700657 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 13700756  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700757 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctct 13700856  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700857 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 13700956  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  13700957 tacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 13701023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Complemental strand, 8980433 - 8979867
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980433 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 8980334  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  8980333 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 8980234  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980233 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 8980134  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8980133 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattctcgagctct 8980034  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980033 caatttataaggaggatttctactagagtgtgtgatctacccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 8979934  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  8979933 tacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 8979867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Complemental strand, 21299981 - 21299415
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299981 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 21299882  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  21299881 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 21299782  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299781 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 21299682  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21299681 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtaaagaatactattcccgagctct 21299582  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21299581 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtt 21299482  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  21299481 tacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 21299415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 174 - 733
Target Start/End: Complemental strand, 21305094 - 21304535
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21305094 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacttttcgcggcactacctaagttg 21304995  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  21304994 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggttgcactgccagaaatcgctcgagaataac 21304895  T
Q  374 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304894 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 21304795  T
Q  474 acataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaattta 573  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304794 acacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaattta 21304695  T
Q  574 taaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattc 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304694 taaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattc 21304595  T
Q  674 caaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  21304594 caaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 21304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Original strand, 54991433 - 54991989
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991433 tgttgtttttgtaatttgaaaattacgacaaagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 54991532  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  54991533 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 54991632  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||          |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  54991633 gaataacacctcaatatggttttc----------gaaaaaccactctaatatggtacgtaaaccactcgataaaccaaagaaggagaaaagaaagaacgg 54991722  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  54991723 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttgaagtgaagaatactattcccgagcttt 54991822  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991823 caatttataaggaggatttctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 54991922  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  54991923 tacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 54991989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 167 - 575
Target Start/End: Original strand, 41393192 - 41393584
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393192 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 41393291  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  41393292 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcacagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 41393391  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||           |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||  |||||||||    
T  41393392 gaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggttcgcagaccactcgagaaaccaaagaaggaggaagaaaagaacgg 41393480  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| |||||    || ||||| ||| || |||||||||||| ||||| ||||||||||| ||||||||||||||||| | |||||||||||||    
T  41393481 ttcgtcaacacaaacc----gatggagatgag-ggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctct 41393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 167 - 585
Target Start/End: Complemental strand, 51019521 - 51019117
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51019521 tgttgaatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 51019422  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||||||||    
T  51019421 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacatcccagattctaactgtacgattaaatgctgcattgccagaaatcgctcga 51019322  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||| ||||||||           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||    
T  51019321 gaataacacttcaatatg-----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacgg 51019233  T
Q  467 ttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    |||||||||| |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||| ||    
T  51019232 ttcgtcaacacaaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtc 51019137  T
Q  566 tcaatttataaggaggattt 585  Q
    || |||||||  ||||||||    
T  51019136 tctatttatagagaggattt 51019117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 180 - 575
Target Start/End: Original strand, 53797589 - 53797970
Alignment:
Q  180 atttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaag 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53797589 attttaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaag 53797688  T
Q  280 gtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 379  Q
    |||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  53797689 gtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactgctagaaatcgctcgagaataacacctca 53797788  T
Q  380 atatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataa 479  Q
    |||||           ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||  ||||||| ||||||||||| ||    
T  53797789 atatg-----------gtttcgaaaaaccactctaatatggcacgtagaccactcaaaaaaccaaagaaggaggaagaaaagaacagttcgtcaacacaa 53797877  T
Q  480 accgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||    
T  53797878 acc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatgctaatcccgagctctctatttata 53797970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 439 - 733
Target Start/End: Complemental strand, 54990686 - 54990392
Alignment:
Q  439 aaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagtttt 538  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||    
T  54990686 aaccaaagaaggaggaaagaaagaacggttcgtcaacacaaaccgcgggagggagtagagaggagagaaaacaagagaagagtatttgattctcagtttt 54990587  T
Q  539 ggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacac 638  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54990586 ggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacac 54990487  T
Q  639 tttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||    
T  54990486 tttacactagtttctccatccttgtgttaacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacattagtgttcc 54990392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 169 - 575
Target Start/End: Complemental strand, 9764167 - 9763771
Alignment:
Q  169 ttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactaccta 268  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||| | |||||||| |||||| |||||||||||    
T  9764167 ttgtttttgtaatttgaaaattacgacggaggtttgaaactattaccagggagagtcacgaccaggtcgcctactttaagatgtttcgtggcactaccta 9764068  T
Q  269 agttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgaga 368  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||    
T  9764067 agttgtgcaaggtagactaacaaccgcaccgtctctaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgaga 9763968  T
Q  369 ataacacctcaatatggttttcgaaaagtttcg-aaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggt 467  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||       || ||||||||| ||||||||||||||||||  ||||||||||    
T  9763967 ataacacctcaatatgg-tttcgaaaagtttcgaaaaaaccactctaata-------tataccactcgagaaaccaaagaaggaggaagaaaagaacggt 9763876  T
Q  468 tcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctc 567  Q
    ||||||||| |||||||||||  ||  ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||| | ||||||||||||    
T  9763875 tcgtcaacacaaaccgcggga--gatgaga-aggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaataccaatcccgagctctc 9763779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 13710634 - 13711010
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13710634 aaaattacgacggagcttcgaaaatattaccggggtgagtcacgaccag-tcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 13710732  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13710733 ctagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcagtatg 13710832  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggaggaaagaaagaacggttcgtcaacataaaccg 483  Q
               ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||  |||||| |||||||||||| |||||     
T  13710833 -----------gtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagaggggaggaagaaaagaatggttcgtcaacacaaacc- 13710920  T
Q  484 cgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
       |||||||| ||| ||| |||||||||||| ||||| ||||||||||  ||||||||||||||||| | |||||||||||||| |||||||    
T  13710921 ---gagggagatgagaaggggagaaaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagctctctatttata 13711010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 13695124 - 13695503
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    ||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13695124 aaaattacgagggagcttcgaaaatattaccggggtgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaagttgtgcaaggtaga 13695223  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgc--caactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc-aat 381  Q
    |||||||||||||||||||||||||||||||||| |||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13695224 ctagcaaccgcgccgtctccaggataaaacagcctagattctaaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaaat 13695323  T
Q  382 atggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaac 481  Q
    |||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||   |||||| |||| ||||||| ||||    
T  13695324 atg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggaggaggaaaagaatggtttgtcaacacaaac 13695412  T
Q  482 cgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |    |||||||| ||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  13695413 c----gagggagatgagaaggggagaaaaccagagaagagtattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 13695503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 47046438 - 47046060
Alignment:
Q  185 aaaattacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtag 283  Q
    |||| |||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47046438 aaaaatacgacagagcttttggaacaattaccggggtgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaagttgtgcaaggtag 47046339  T
Q  284 actagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatat 383  Q
    |||||||||||||||||||||||||||||||||| ||||| | |||||||||||         ||||||||||||||||||||||||||||||||| |||    
T  47046338 actagcaaccgcgccgtctccaggataaaacagctcagattcaaactgtacgat---------cactgccagaaatcgctcgagaataacacctcagtat 47046248  T
Q  384 ggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacggttcgtcaacataaacc 482  Q
    || ||||||||||||||| |||||||||||||||||| ||| ||||||| ||| |||||||||| ||||| ||| ||||||||||||||||||| ||       
T  47046247 gg-tttcgaaaagtttcg-aaaaccactctaatatggcacgcagaccacccgagaaaccaaagagggagggaagaaaagaacggttcgtcaacacaa--- 47046153  T
Q  483 gcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
     |  |||||||| ||| ||| |||||||||||| ||||  ||||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  47046152 -cctgagggagatgagaaggggagaaaaccagagaagatgattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 47046060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 39999363 - 39999609
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39999363 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 39999459  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39999460 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 39999559  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  39999560 ccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 39999609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 40004321 - 40004567
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40004321 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 40004417  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40004418 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 40004517  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  40004518 ccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 40004567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 54343497 - 54343743
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54343497 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 54343593  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54343594 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 54343693  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  54343694 ccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 54343743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 54348651 - 54348897
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54348651 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 54348747  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54348748 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 54348847  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  54348848 ccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 54348897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 503 - 707
Target Start/End: Original strand, 36359664 - 36359868
Alignment:
Q  503 gagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgat 602  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  36359664 gagaaaaccagagaagagtattcgattctcagttttggagtaaagaatactattcctgagctctcaatttataaggagaatttctactagagtgtgtgat 36359763  T
Q  603 ctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatact 702  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  36359764 ctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacatttcaaaggctccacaaactcactagtatact 36359863  T
Q  703 ccaag 707  Q
    |||||    
T  36359864 ccaag 36359868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 36354436 - 36354682
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||     
T  36354436 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtaaagaatactattt 36354532  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36354533 ctgagctctcaatttataaagaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 36354632  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36354633 ccttgtgttaacattccaaaggctccacaaattcactagtatactccaag 36354682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 167 - 386
Target Start/End: Original strand, 36359239 - 36359460
Alignment:
Q  167 tgttgtatttgtaatttgaaaat-tacgacagagc-tttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||| |||||||||||||||| |||||  |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  36359239 tgttgtttttgtaatttgaaaatatacgatggagcctttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcacta 36359338  T
Q  265 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctc 364  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  36359339 cctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 36359438  T
Q  365 gagaataacacctcaatatggt 386  Q
    |||||| ||||||| |||||||    
T  36359439 gagaatgacacctcgatatggt 36359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 54348309 - 54348523
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  54348309 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 54348408  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  54348409 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 54348508  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  54348509 acacctcgatatggt 54348523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 167 - 387
Target Start/End: Original strand, 36354121 - 36354343
Alignment:
Q  167 tgttgtatttgtaatttgaaaat-tacgacagagc-tttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||| |||||||||| ||||| |||||  |||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  36354121 tgttgtttttgtaatttaaaaatatacgatggagcctttgaaactattatcgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcacta 36354220  T
Q  265 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctc 364  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  36354221 cctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 36354320  T
Q  365 gagaataacacctcaatatggtt 387  Q
    |||||| ||||||| ||||||||    
T  36354321 gagaatgacacctcgatatggtt 36354343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 40003979 - 40004193
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||   |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  40003979 tttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 40004078  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  40004079 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 40004178  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  40004179 acacctcgatatggt 40004193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 39999021 - 39999235
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||   |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  39999021 tttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 39999120  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||     
T  39999121 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctacactgccagaaatcgctcgagaatg 39999220  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  39999221 acacctcgatatggt 39999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 54343155 - 54343369
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||  | |    
T  54343155 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccgaat 54343254  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  54343255 tgtgcaaggtagactagcaaccgcgccgtctacaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 54343354  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  54343355 acacctcgatatggt 54343369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 586 - 707
Target Start/End: Original strand, 53798329 - 53798450
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53798329 ctactagagtgtgtgatctacccaatgtaggacataaaattttcaattcacactttacactagtttctccattcttgtgtttacattccaaaggctccac 53798428  T
Q  686 aaactcactagtatactccaag 707  Q
    ||||  ||||||||||||||||    
T  53798429 aaaccaactagtatactccaag 53798450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 41393858 - 41394005
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  41393858 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttttccatccttgtgtttacattccaaaggcttcac 41393957  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  41393958 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 41394005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 212 - 323
Target Start/End: Original strand, 653035 - 653146
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  653035 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaatttgtgcaaggtagactaacaaccacgccgtctccaggataa 653134  T
Q  312 aacagcccagat 323  Q
    ||||||||||||    
T  653135 aacagcccagat 653146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 586 - 707
Target Start/End: Complemental strand, 51018853 - 51018732
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  51018853 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtgtacattccaaagtctccac 51018754  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||| ||||||    
T  51018753 ataacaactagtatattccaag 51018732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 9763420 - 9763273
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  9763420 ctactagagtgtgtgatctactcaatgtgggacataaaattttcaattcatgctttacactagtttctacatccttgtgtttacattccaaagtctccac 9763321  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  9763320 ataacaactagtatactccaagtttatgccaatatacactagtgttcc 9763273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 13695757 - 13695904
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  13695757 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 13695856  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  13695857 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 13695904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 13711370 - 13711517
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  13711370 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 13711469  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  13711470 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 13711517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 10120914 - 10120801
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||||| || |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  10120914 attaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 10120815  T
Q  310 aaaacagcccagat 323  Q
    |||| |||||||||    
T  10120814 aaaatagcccagat 10120801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 33 - 159
Target Start/End: Complemental strand, 12889179 - 12889052
Alignment:
Q  33 aaaaccacacctcggttttcgcttttcctcaaatccaac-actattcatcacgatgtagatccaaatggtggtggtgcgacgaggcgcagcctccgcatc 131  Q
    ||||||||| |  ||||| | |||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  12889179 aaaaccacatcgtggtttcccctttccctcaaatccaaccactatccatcacgatgtagatccaaatggtggtggtgcgacgaggcgaggcctccgcatc 12889080  T
Q  132 acctcatctccggcgtccctcatcctat 159  Q
    |||||| |||||| ||||||||||||||    
T  12889079 acctcacctccggtgtccctcatcctat 12889052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 4207042 - 4207188
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| | |||| |    
T  4207042 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtg-ttacattccaatgtctcctc 4207140  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  4207141 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 4207188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 586 - 706
Target Start/End: Complemental strand, 47045767 - 47045647
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||| || | |||| |    
T  47045767 ctactagagtgtgtgatctatccaatgtgggacataaaattttcaattcacactttacactagtttctatttcattgtgtttacattctaatgtctcctc 47045668  T
Q  686 aaactcactagtatactccaa 706  Q
    | |   |||||||||||||||    
T  47045667 ataacaactagtatactccaa 47045647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 222 - 323
Target Start/End: Complemental strand, 8083121 - 8083019
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccca 320  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| | ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  8083121 agtcacgatcaggtcgctctctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcctccaagataaaacagccca 8083022  T
Q  321 gat 323  Q
    |||    
T  8083021 gat 8083019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 211 - 320
Target Start/End: Original strand, 24490022 - 24490132
Alignment:
Q  211 ttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||||| |||||   ||| ||||||||||||||||| ||||||||||  |||||||||    
T  24490022 ttaccgggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggat 24490121  T
Q  310 aaaacagccca 320  Q
    |||||||||||    
T  24490122 aaaacagccca 24490132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 37259973 - 37259877
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  37259973 tgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 37259877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 31269033 - 31269129
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||| || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  31269033 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 31269129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 317
Target Start/End: Original strand, 34644546 - 34644655
Alignment:
Q  209 tattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccagg 307  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||||| ||||| || |  ||||| |||||| |||| ||||||||||| || ||||    
T  34644546 tattaccgggttgagtcacgatcatgtcgctttctttaagacgtttcgcgacactatccgagtttgtgtaaggtaaactaacaaccgcgccgcctacagg 34644645  T
Q  308 ataaaacagc 317  Q
    ||||||||||    
T  34644646 ataaaacagc 34644655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 5271515 - 5271419
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  5271515 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 5271419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 13522088 - 13521992
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  13522088 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 13521992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 31273520 - 31273616
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  31273520 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 31273616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 33463452 - 33463356
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || ||||||||||||| ||| |  ||||| ||||| |||||||||||||||    
T  33463452 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaaggcagattgtcaaccccgccgcctccaggataaaaca 33463356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 37264660 - 37264564
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || || ||||||| |||||| ||||| ||||| |||||||||||||||    
T  37264660 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaaca 37264564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 13699067 - 13699113
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13699067 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 13699113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 21301371 - 21301325
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21301371 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 21301325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 36357870 - 36357916
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36357870 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 36357916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 40002798 - 40002844
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40002798 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 40002844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 54346932 - 54346978
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  54346932 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 54346978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 39319621 - 39319706
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccg 294  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||| || |||||| | |  ||||||||||||||||| ||||||    
T  39319621 attaccgggttgagtcacgatcaggtcgctttctttaagacgtttcacgacactactcgagtttgtgcaaggtagactaacaaccg 39319706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 31765885 - 31765981
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| |||||||| || |||||||||||||||| |||||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  31765885 tgagtcacaaccaggtcactctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 31765981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 211 - 340
Target Start/End: Complemental strand, 5928324 - 5928194
Alignment:
Q  211 ttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||| || |||||||||||||||||||| ||||||||| |||| | |||||| | | || |||||||||| |||||| ||||| | ||| |||||||||    
T  5928324 ttaccaggttgagtcacgaccaggtcgctctctttaagatgtttagtggcactgctcaaaattgtgcaaggcagactatcaaccacaccgcctccaggat 5928225  T
Q  310 aaaac-agcccagatgccaactgtacgattaa 340  Q
    ||||| ||||||| || ||||||| |||||||    
T  5928224 aaaacaagcccagctg-caactgttcgattaa 5928194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 8981823 - 8981777
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  8981823 catcaatggcgtaccctttcccaacaaaaataccattcttagtgatg 8981777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 10318885 - 10318779
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagga 308  Q
    ||||||||| ||||||||||||| |||||| |||||||||| |||||||    || | ||| ||||||||||||||||| ||||||||||| ||| ||||    
T  10318885 attaccgggttgagtcacgaccatgtcgctctctttaagacatttcgcgatcgtatccaagtttgtgcaaggtagactaacaaccgcgccgcctctagga 10318786  T
Q  309 taaaaca 315  Q
    || ||||    
T  10318785 tagaaca 10318779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 13702945 - 13702991
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  13702945 catcagtggcgtaccctttcccaacaaaagtaccattcttagtgatg 13702991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 17359525 - 17359633
Alignment:
Q  209 tattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagg 307  Q
    |||||||||| ||||||||||     ||||||||||||||||||||| ||||||||||  || |||| |||||||||||| |||| |||||  |||||||    
T  17359525 tattaccgggttgagtcacga-----tcgctttctttaagacgtttcccggcactacccgagtttgttcaaggtagactaacaactgcgccacctccagg 17359619  T
Q  308 ataaaacagcccag 321  Q
    || ||||| |||||    
T  17359620 attaaacaacccag 17359633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 8693710 - 8693806
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||| || || |||||||||  | |||| ||||| ||||| ||| |||||||||||    
T  8693710 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacgccgcctcaaggataaaaca 8693806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 16421028 - 16421124
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||  || || |||||||||| |||||| ||||| ||||| || ||||||||||||    
T  16421028 tgagtcacgaccaggtcgctctcattaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacaggataaaaca 16421124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 30564504 - 30564412
Alignment:
Q  226 acgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 317  Q
    ||||| |||||||| ||| |||||||||||||||||||| || || ||||||||||||||||| |||  | |||| ||| |||||||||||||    
T  30564504 acgactaggtcgctctctgtaagacgtttcgcggcactacccaaatttgtgcaaggtagactaacaattgtgccgcctcgaggataaaacagc 30564412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 31729481 - 31729387
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||| || ||||||||| |||||||||||||||| ||||||| || || |||||||||| |||| | ||| | ||||| |||||||||||||||    
T  31729481 agtcatgatcaggtcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataaaaca 31729387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 54990732 - 54990687
Alignment:
Q  332 tacgattaaaggctgcactgccagaaatcgctcgagaataacacct 377  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||    
T  54990732 tacgattaaaggctgcactaccagaaattgctcgagaataacacct 54990687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 2819843 - 2819939
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||| ||||||||||| |||||| || |||  || || ||||||||||||||||| | |||  ||||  ||||||||||||||    
T  2819843 tgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctaccatgccgcgtccaggataaaaca 2819939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 12823991 - 12823895
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||| |||||||||||| |||||||||| ||||| ||||||  || || |||||||||  | |||| ||||| ||||| |||||||||||||||    
T  12823991 tgagtcatgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccaggataaaaca 12823895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 34560489 - 34560565
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagacta 287  Q
    ||||||| |||||||||||||||||||||||||||||||   || |||||||| || || || ||||||||||||||    
T  34560489 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattatgcaaggtagacta 34560565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 55251719 - 55251814
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| | |||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||  |||||||||||||||    
T  55251719 tgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccaggataaaaca 55251814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 42758851 - 42758756
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaac 314  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||  || || |||||||||  |||||| ||||| || || |||||| |||||||    
T  42758851 tgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcctccagaataaaac 42758756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 3998152 - 3998051
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcc 318  Q
    ||||||||||||||||||||||||||||||    || |||||||| || || |||||||| |||||||| |||||| |  | ||||||||||||||| ||    
T  3998152 tgagtcacgaccaggtcgctttctttaagataaatcacggcactacccgaaattgtgcaaagtagactaacaaccgtg-tgcctccaggataaaacaacc 3998054  T
Q  319 cag 321  Q
    |||    
T  3998053 cag 3998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 33469069 - 33468973
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||| |||||| | |||||||||||||| | ||||||  || ||||||||||||| |||||  ||||| ||||  ||||| |||||||||    
T  33469069 tgagtcacgactaggtcgttctctttaagacgttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctccatgataaaaca 33468973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 19101978 - 19102072
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||| ||||| || | |||||||||||||| |||||||| | || ||||||||   |||||| ||||| || || |||||||||||||||    
T  19101978 agtcacgacgaggtcactctgtttaagacgtttcgtggcactactcaaaattgtgcaaaacagactatcaaccacgtcgcctccaggataaaaca 19102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 31298469 - 31298384
Alignment:
Q  231 caggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 316  Q
    |||||||||||||||||||||||||  | |||||| | |  ||||||||||||||||| |||| | | || ||||||||||||||||    
T  31298469 caggtcgctttctttaagacgtttcatgacactactcgagtttgtgcaaggtagactaacaactgtg-cgcctccaggataaaacag 31298384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 8030561 - 8030476
Alignment:
Q  231 caggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||| |||||||||||||| | |||||| || ||  ||||||||| ||||||| ||||  ||| | |||||||||||||||    
T  8030561 caggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccaggataaaaca 8030476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 514; Significance: 0; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Original strand, 17510005 - 17510571
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510005 tgttgtttttgtaatttgaaaattacgacagagctttgaaaccattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 17510104  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  17510105 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 17510204  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510205 gaataacacctcaatatggttttcaaaaaatttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 17510304  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510305 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctct 17510404  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510405 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 17510504  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  17510505 tacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 17510571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 174 - 733
Target Start/End: Original strand, 42019527 - 42020086
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019527 tttgtattttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 42019626  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  42019627 tgcaaggtagactagcaaccgtgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 42019726  T
Q  374 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  42019727 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtaaaccactcgataaaccaaagaaggaggaaagaaagaatggttcgtca 42019826  T
Q  474 acataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaattta 573  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019827 acacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaattta 42019926  T
Q  574 taaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattc 673  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  42019927 taaggaggatttctactagagtgtgtgatctatccgatgtgggacataaaattttcaattcacattttacattagtttctccatccttgtgtttacattc 42020026  T
Q  674 caaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  42020027 caaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 42020086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 167 - 707
Target Start/End: Original strand, 17504900 - 17505440
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17504900 tgttgtttttgtaatttgaaaattatgacagagctttgaaactattaccggggtgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacc 17504999  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  17505000 taagttgtgcaaggtagactagcaaccgcgtcgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatccctcga 17505099  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505100 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 17505199  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505200 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctct 17505299  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  17505300 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacaatagtttttccatccttgtgtt 17505399  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  17505400 tacattccaaaggctccacaaactcactagtatattccaag 17505440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 167 - 707
Target Start/End: Original strand, 41858541 - 41859071
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  41858541 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggg-tgagtcacgatcaggtcgctttctttaagacgtttcacggcactacc 41858639  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  41858640 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 41858739  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  41858740 gaataacacctcaatatggttttcgaaaagtttcaaaaaaccactctaatatggtatgtagaccactcgataaaccaaagaatgaggaaagaaagaacgg 41858839  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||       |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41858840 ttcgtcaacacaaaccgcg-------gaagagagaagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctct 41858932  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  41858933 caatttataaggagaatttctactaga--gtgtgatctacccgatgtgggacatagaattttcaattcacactttacactaatttttccatccttgtgtt 41859030  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41859031 tacattccaaaggctccacaaactcactagtatactccaag 41859071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 297 - 707
Target Start/End: Original strand, 43579737 - 43580147
Alignment:
Q  297 ccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaag 396  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43579737 ccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatagttttcgaaaag 43579836  T
Q  397 tttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaag 496  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43579837 tttcgaaaaaccactctaatatggtacgtagaccactcaataaaccaaagaaggaggaaagaaagaacggttcgtcaacacaaaccgcgggagggagaag 43579936  T
Q  497 agaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtg 596  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  43579937 agaggagagaaaatcagagaagagtattcgattctcagttttggtgtgaaaaatactattcccgagctctcaatttataaggaggatttctactagagta 43580036  T
Q  597 tgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactag 696  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580037 tgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactag 43580136  T
Q  697 tatactccaag 707  Q
    |||||||||||    
T  43580137 tatactccaag 43580147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 167 - 514
Target Start/End: Original strand, 41853496 - 41853842
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41853496 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggg-tgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacc 41853594  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||    
T  41853595 taagttgtgcaaagtagactagcaaccgcgccgtctctacgataaaacagcccagattctaactgtacgattaaaggctacactgccagaaatcgctcga 41853694  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41853695 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 41853794  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccaga 514  Q
    ||||| || | ||||||||||||||||||||||| |||||||||||||    
T  41853795 ttcgttaaaacaaaccgcgggagggagaagagagcagagaaaaccaga 41853842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 166 - 575
Target Start/End: Original strand, 36253772 - 36254177
Alignment:
Q  166 gtgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 265  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36253772 gtgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 36253871  T
Q  266 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcg 365  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  36253872 ctaagttgtgcaaggtagactagcaaccgcgccgcctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgctagaaatcgctcg 36253971  T
Q  366 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacg 465  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||  ||||||||    
T  36253972 agaataacacctcaatatgg-tttcgaaaagtttcgaaaaaccactctaatatggtacgcaaaccactcgagaaaccaaagaaggaggaagaaaagaacg 36254070  T
Q  466 gttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    ||||||||||| |||| | ||||  ||  ||| ||| |||||||| ||| ||||| ||||||||||| ||||||||||||||||| | |||||| |||||    
T  36254071 gttcgtcaacacaaactgaggga--gatgagaaagg-gagaaaactagagaagaggattcgattctcggttttggagtgaagaatcccattcccaagctc 36254167  T
Q  566 tcaatttata 575  Q
    || |||||||    
T  36254168 tctatttata 36254177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 167 - 575
Target Start/End: Complemental strand, 1414200 - 1413806
Alignment:
Q  167 tgttgtatttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 265  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1414200 tgttgtttttgtaatttgaaaaattacgacaaagctttgaaactattactggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactac 1414101  T
Q  266 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcg 365  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  1414100 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaacaactcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 1414001  T
Q  366 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacg 465  Q
    |||||||||||||||||||           ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||  ||||||||    
T  1414000 agaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggta-gcagaccactcgagaaaccaaagaaggaggaagaaaagaacg 1413913  T
Q  466 gttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagct 564  Q
    ||||||||||| |||||    |||||||| ||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||    
T  1413912 gttcgtcaacacaaacc----gagggagatgagaaggggagaaaaccagataagaggattcgattctcggttttggagtgaagaatcccattcccgagct 1413817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 433 - 733
Target Start/End: Original strand, 42024566 - 42024866
Alignment:
Q  433 tcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctc 532  Q
    |||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42024566 tcgaaaaaccaaagaaggaggaaagaaagaacgattcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctc 42024665  T
Q  533 agttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaat 632  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42024666 aattttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctatccgatgtgggacataaaattttcaat 42024765  T
Q  633 tcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttc 732  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  42024766 tcacattttacactagtttctccatccttatgtttacattccaaaggctccacaaactcactagtatacttcaagtttttttcattatacactagtgttc 42024865  T
Q  733 c 733  Q
    |    
T  42024866 c 42024866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 174 - 575
Target Start/End: Original strand, 26709056 - 26709444
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26709056 tttggaatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattg 26709155  T
Q  274 tg--caaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    ||  ||||||||||||||||||||| | |||||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||    
T  26709156 tgtgcaaggtagactagcaaccgcgtcatctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagtaatcgctcgagaata 26709255  T
Q  372 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgt 471  Q
    |||||||||||||           ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  |||||| ||||| |    
T  26709256 acacctcaatatg-----------gtttcgaaaaaccactctaatatggtac-cagaccactcgagaaaccaaagaaggaggaagaaaagaatggttcat 26709343  T
Q  472 caacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaat 570  Q
    ||||| |||||    |||||||| ||| ||| |||||||||| | ||||| |||| |||||||||||||||||||||||| | | |||||||||||| ||    
T  26709344 caacacaaacc----gagggagatgagaaggggagaaaaccaaagaagaggattcaattctcagttttggagtgaagaatgcaaatcccgagctctctat 26709439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 174 - 575
Target Start/End: Original strand, 26978790 - 26979178
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26978790 tttggaatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattg 26978889  T
Q  274 tg--caaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    ||  ||||||||||||||||||||| | |||||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||    
T  26978890 tgtgcaaggtagactagcaaccgcgtcatctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagtaatcgctcgagaata 26978989  T
Q  372 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgt 471  Q
    |||||||||||||           ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  |||||| ||||| |    
T  26978990 acacctcaatatg-----------gtttcgaaaaaccactctaatatggtac-cagaccactcgagaaaccaaagaaggaggaagaaaagaatggttcat 26979077  T
Q  472 caacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaat 570  Q
    ||||| |||||    |||||||| ||| ||| |||||||||| | ||||| |||| |||||||||||||||||||||||| | | |||||||||||| ||    
T  26979078 caacacaaacc----gagggagatgagaaggggagaaaaccaaagaagaggattcaattctcagttttggagtgaagaatgcaaatcccgagctctctat 26979173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 24776945 - 24776563
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776945 aaaattacgacagagcttcgaaaatattactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 24776846  T
Q  285 ctagcaacc---gcgccgtctccaggataaaacagcccagatgc--caactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc- 378  Q
    |||||||||   |||||||||||||||||||||||||||||| |   ||||||||||||||||| | ||||||||||||||||||||||||||||||||     
T  24776845 ctagcaaccgcggcgccgtctccaggataaaacagcccagattctaaaactgtacgattaaaggattcactgccagaaatcgctcgagaataacacctca 24776746  T
Q  379 aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacata 478  Q
    ||||||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||   ||||||||||||||||||| |    
T  24776745 aatatg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggaggaggaaaagaacggttcgtcaacaca 24776657  T
Q  479 aaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    ||||    |||||||| ||| ||| |||||||||||| ||||||||||||||||| |||||||||| |||||||| | ||| |||||||| |||||||    
T  24776656 aacc----gagggagatgagaaggggagaaaaccagagaagagtattcgattctcggttttggagtaaagaataccaatcctgagctctctatttata 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 24771487 - 24771108
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24771487 aaaattacgacagagcttcgaaaatattaccgggatgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaagttgtgcaaggtaga 24771388  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgc--caactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaata 382  Q
    ||| ||||||||||||||||||||||||||| ||||||| |   ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |    
T  24771387 ctaacaaccgcgccgtctccaggataaaacaacccagattctaaaactgtacgattaaaggctacactgctagaaatcgctcgagaataacacctcaa-a 24771289  T
Q  383 tggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaacc 482  Q
    |         |  ||||||||||||||||| |||| |||| | ||| | ||||| |||||||||||||||||   ||||||||||||||||||| |||||    
T  24771288 t---------acggtttcgaaaaaccactcaaatacggtatgcagatcgctcgagaaaccaaagaaggaggaggaaaagaacggttcgtcaacacaaacc 24771198  T
Q  483 gcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
        |||||||| ||| ||| |||||||||||| |||||| || ||||||  |||||||||| |||||||| | ||| |||||||| |||||||    
T  24771197 ----gagggagatgagaaggggagaaaaccagagaagagtgtttgattcttggttttggagtaaagaataccaatcctgagctctctatttata 24771108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 597 - 707
Target Start/End: Original strand, 41853846 - 41853956
Alignment:
Q  597 tgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactag 696  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41853846 tgtgatctacccgatgtgggacatagaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactccctag 41853945  T
Q  697 tatactccaag 707  Q
    |||||||||||    
T  41853946 tatactccaag 41853956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 586 - 706
Target Start/End: Complemental strand, 1413220 - 1413100
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1413220 ctactagagtgtgtgatctactcaatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccac 1413121  T
Q  686 aaactcactagtatactccaa 706  Q
    | |   |||||||||||||||    
T  1413120 ataacaactagtatactccaa 1413100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 13582793 - 13582682
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  13582793 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaatttgtgcaaggtagactaacaaccacgccgtctccaggataa 13582694  T
Q  312 aacagcccagat 323  Q
    ||||||||||||    
T  13582693 aacagcccagat 13582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 212 - 323
Target Start/End: Original strand, 14374127 - 14374238
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  14374127 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcagggtagactaacaaccacgccgtctccaggataa 14374226  T
Q  312 aacagcccagat 323  Q
    ||||||||||||    
T  14374227 aacagcccagat 14374238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 24435972 - 24435861
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||    
T  24435972 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaagttgtgcaaggtagactatcaaccacgccgtctccaggataa 24435873  T
Q  312 aacagcccagat 323  Q
    ||||||||||||    
T  24435872 aacagcccagat 24435861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 586 - 707
Target Start/End: Original strand, 36254517 - 36254638
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  36254517 ctactagagtgtgtgatctacccaatgtggaacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaatgtctccac 36254616  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||||||||||    
T  36254617 ataacaactagtatactccaag 36254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 7805066 - 7805174
Alignment:
Q  215 cggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaac 314  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  7805066 cgggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 7805165  T
Q  315 agcccagat 323  Q
    |||||||||    
T  7805166 agcccagat 7805174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 24770752 - 24770605
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  24770752 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 24770653  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  24770652 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 24770605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 586 - 702
Target Start/End: Original strand, 26709688 - 26709804
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    |||||| | ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  26709688 ctactacaatgtgtaatctactcaatgtgggacataaaattttcaattcacactttacactagtttctccattcttgtgtttacattccataggctccac 26709787  T
Q  686 aaactcactagtatact 702  Q
    ||||  |||||||||||    
T  26709788 aaaccaactagtatact 26709804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 586 - 702
Target Start/End: Original strand, 26979422 - 26979538
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    |||||| | ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  26979422 ctactacaatgtgtaatctactcaatgtgggacataaaattttcaattcacactttacactagtttctccattcttgtgtttacattccataggctccac 26979521  T
Q  686 aaactcactagtatact 702  Q
    ||||  |||||||||||    
T  26979522 aaaccaactagtatact 26979538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 36607037 - 36607173
Alignment:
Q  32 taaaaccacacctcggttttcgcttttcctcaaatccaac-actattcatcacgatgtagatccaaatggtggtggtgcgacgaggcgcagcctccgcat 130  Q
    ||||||||||||   || ||| |||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  36607037 taaaaccacaccgtcgtattccctttccctcaaattcaaccactattcatcacgatgtagatccaattggtggtggtgcgacgaggtgcggcctccgcat 36607136  T
Q  131 cacctcatctccggcgtccctcatcctattcagtagt 167  Q
    ||||||| || |||||||||||||||||||| |||||    
T  36607137 cacctcaccttcggcgtccctcatcctattcggtagt 36607173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 586 - 676
Target Start/End: Complemental strand, 24776206 - 24776116
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 676  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  24776206 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttatactagtttctacatcattgtgtttacattccaa 24776116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 209 - 315
Target Start/End: Original strand, 28857850 - 28857958
Alignment:
Q  209 tattaccggggtgagtcacgaccaggtcgctttc-tttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccag 306  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| | ||||| ||||| || |||    
T  28857850 tattaccgggttgagtcacgaccaagtcgctttcttttaagacgtttcgcggcactacctgagtttgtgcaaggtagaccaacaaccacgccgcctacag 28857949  T
Q  307 gataaaaca 315  Q
    |||||||||    
T  28857950 gataaaaca 28857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 37248891 - 37248795
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||| || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  37248891 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 37248795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 26667271 - 26667367
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  26667271 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26667367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 26938868 - 26938964
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  26938868 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26938964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 29168069 - 29167973
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  29168069 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 29167973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 378
Target Start/End: Original strand, 36428708 - 36428867
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaac-agc 317  Q
    |||||||||||||||||||| |||||||||||||| |||| |||  || || |||||||||| |||||| ||||| ||||| |||||||||||||| |||    
T  36428708 tgagtcacgaccaggtcgctctctttaagacgttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagc 36428807  T
Q  318 ccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc 378  Q
    |||| |  ||||||| |||||||   ||||||||    ||||||||||||||| |||||||    
T  36428808 ccagct-acaactgttcgattaactactgcactgtagaaaatcgctcgagaattacacctc 36428867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 556694 - 556790
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| | ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  556694 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 556790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 561466 - 561562
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| | ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  561466 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 561562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 7451757 - 7451853
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||| | |||||||||||||||    
T  7451757 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataaaaca 7451853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 12103024 - 12103120
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  12103024 tgagttacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 12103120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 36423636 - 36423732
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||| ||||||||||||| |||||||||||||||||||||||  || || |||||||||| |||||| ||||| ||||| |||||| ||||||||    
T  36423636 tgagtcgcgaccaggtcgctctctttaagacgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaaca 36423732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 36937607 - 36937511
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  36937607 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36937511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 36942361 - 36942265
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  36942361 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36942265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 17508630 - 17508676
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17508630 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 17508676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 21324069 - 21323960
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| ||||||| |||||||||||||||||||||||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  21324069 taccgggttgagtcatgaccaggtcgctttctttaagacaaatcacggcactatccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 21323971  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  21323970 aaacagcccag 21323960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 31731535 - 31731644
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||||||||||||||||||||||||||   ||  ||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  31731535 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcagggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 31731633  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  31731634 aaacagcccag 31731644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 31986708 - 31986822
Alignment:
Q  202 ttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgt 300  Q
    |||||| ||||| |||| ||||||||||  ||||||||||||||||||||||||||| |||||||  || || ||||||||||| || |||  ||||||     
T  31986708 ttgaaaatattatcgggttgagtcacgataaggtcgctttctttaagacgtttcgcgacactacccgagtttatgcaaggtagattaacaattgcgccgc 31986807  T
Q  301 ctccaggataaaaca 315  Q
    || ||||||||||||    
T  31986808 cttcaggataaaaca 31986822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 41857149 - 41857195
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41857149 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 41857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 42023542 - 42023588
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42023542 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 42023588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 27631376 - 27631473
Alignment:
Q  11 ctaaaacctttgttctctctctaaaaccacacctcggttttcgcttttcctcaaatccaac-actattcatcacgatgtagatccaaatggtggtggt 107  Q
    ||||||||| ||| |||||| |||||||||||    |||||| |||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  27631376 ctaaaacctctgtcctctctgtaaaaccacactattgttttccctttccctcaaatccaaccactattcatcacgatgtaaatccaaattgtggtggt 27631473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 13301581 - 13301482
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcc 318  Q
    |||||||||||||||||||||||||||||||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||||||||||    
T  13301581 tgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccaaaattgtgcaaggtagactaacaaccgtg-tgcctccaggataaaacagcc 13301483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 32461645 - 32461549
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| | ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  32461645 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 32461549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 39518409 - 39518505
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca-ctacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || ||||||| || |||||| ||||| ||||| |||||||||||||||    
T  39518409 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccaggataaaaca 39518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 39523048 - 39523144
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca-ctacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  39523048 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 39523144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 42001433 - 42001529
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || ||||| |||  |||||| ||||| ||||| |||||||||||||||    
T  42001433 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaaca 42001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 24772895 - 24772849
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24772895 catcagtggcgtaccttttcccaacaaaaataccattcttagtgatg 24772849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 6514697 - 6514601
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||| ||| || |||||||||||||||| ||||||  || || || ||||||| |||||| ||||| ||||| |||||||||||||||    
T  6514697 tgagtcacgaccaagtcactctctttaagacgtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccaggataaaaca 6514601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 10759915 - 10759820
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| | |||||||||||| | |||||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  10759915 tgagtcacgaccaggtcgctct-tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 10759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 12045235 - 12045139
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||  |||||||||||||||| ||||||  || || |||||||||  |||||| | ||| ||||| |||||||||||||||    
T  12045235 tgagtcacgaccaggtcgccctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataaaaca 12045139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 12501995 - 12501899
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||  || || ||||||||   |||||| ||||| ||||| |||||||||||||||    
T  12501995 tgagtcatgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccaggataaaaca 12501899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 41996664 - 41996760
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||  || || ||||| |||  |||||| ||||| ||||| |||||||||||||||    
T  41996664 tgagtcacgaccaggttgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaaca 41996760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 3665931 - 3666027
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||| |||||||| |||| ||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||  ||| |||||||||||    
T  3665931 tgagtcacgactaggtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctctaggataaaaca 3666027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 12042028 - 12041932
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||| | |||||||||||||||| ||||||  || ||  | ||||||| | |||| ||||| ||||| |||||||||||||||    
T  12042028 tgagtcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccaggataaaaca 12041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 12102927 - 12102831
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||| |||||||| |||||||||| ||| | ||||||  || || |||||||||| |||||| ||||| | ||||| |||||||||||||    
T  12102927 tgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccacaccgtcaccaggataaaaca 12102831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 40147894 - 40147988
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 313  Q
    ||||||| || ||||||||| ||||||||| |||||| |||||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||    
T  40147894 tgagtcatgatcaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaa 40147988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 6155515 - 6155419
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||  || || || | ||||  |||||| ||||| | ||| |||||||||||||||    
T  6155515 tgagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccaggataaaaca 6155419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 25689388 - 25689296
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    |||||||||||||  ||| ||||||||||| ||||||||||||||  | || || |||||||| ||||| |||||||| ||| || |||||||    
T  25689388 tgagtcacgaccatatcgttttctttaagatgtttcgcggcactattcaaatttatgcaaggtcgactatcaaccgcgtcgtatctaggataa 25689296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 20181159 - 20181118
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggca 261  Q
    ||||||||||||||||| || |||||||||||||||| ||||    
T  20181159 tgagtcacgaccaggtcactctctttaagacgtttcgtggca 20181118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 509; Significance: 0; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 167 - 707
Target Start/End: Original strand, 3510 - 4050
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3510 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 3609  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3610 taagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 3709  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  3710 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacatagaccactcgataaaccaaagaaggaggaaagaaaaaacgg 3809  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3810 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctct 3909  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3910 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 4009  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4010 tacattccaaaggctccacaaactcactagtatactccaag 4050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 2120 - 2166
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2120 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 507; Significance: 0; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 165 - 707
Target Start/End: Complemental strand, 37409687 - 37409145
Alignment:
Q  165 agtgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409687 agtgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 37409588  T
Q  265 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctc 364  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  37409587 cctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctc 37409488  T
Q  365 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaac 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  37409487 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacatagaccactcgataaaccaaagaaggaggaaagaaaaaac 37409388  T
Q  465 ggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagct 564  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409387 ggttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagct 37409288  T
Q  565 ctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtg 664  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409287 ctcaatttataaggaggatttatactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtg 37409188  T
Q  665 tttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37409187 tttacattccaaaggctccacaaactcactagtatactccaag 37409145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 167 - 707
Target Start/End: Complemental strand, 37404564 - 37404026
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404564 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 37404465  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  37404464 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 37404365  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37404364 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaataacgg 37404265  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37404264 ttcgtcaacacaaac--cgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgggctct 37404167  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404166 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 37404067  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37404066 tacattccaaaggctccacaaactcactagtatactccaag 37404026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 167 - 707
Target Start/End: Original strand, 27716390 - 27716930
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716390 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 27716489  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  27716490 taagttgtgcaaggtagactagcaacagcgtcgtctccaggataaaacagcccagattctaactgtacgattaaagactgcactgccagaaatcgctcga 27716589  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716590 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 27716689  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27716690 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattatcagttttggagtgaagaatactattcccgagctct 27716789  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  27716790 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaaatttcaattcacactttacactagtttctccatccttgtgct 27716889  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  27716890 tacgttccaaaggctccacaaactcactagtatactccaag 27716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 200 - 707
Target Start/End: Complemental strand, 11251228 - 11250731
Alignment:
Q  200 ctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccg 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251228 ctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccg 11251129  T
Q  300 tctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagttt 399  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||        
T  11251128 tctccaggataaaacagcccagattctaactgtacgattaaagactgcactgccagtaatcgctcgagaataacacctcaatatggttttcgaaaa---- 11251033  T
Q  400 cgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagaga 499  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11251032 ------accactctaatatgatacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacacaaaccgcgggagggagaagaga 11250939  T
Q  500 ggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgt 599  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11250938 ggagagaaaaccagagaagagtattcgattctcaattttggagtaaagaatactattcacgagctctcaatttataaggaggatttctactagagtgtgt 11250839  T
Q  600 gatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtat 699  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  11250838 gatctaaccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaagactccacaaactcactggtat 11250739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 235 - 733
Target Start/End: Original strand, 27711319 - 27711836
Alignment:
Q  235 tcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactag-------------------caaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||                   |||||||||| ||||||||||||||||    
T  27711319 tcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctcctagcaaccgcgccatctccaggataaaaca 27711418  T
Q  316 gcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaa 415  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711419 gcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaa 27711518  T
Q  416 tatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagat 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  27711519 tatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagag 27711618  T
Q  516 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgg 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711619 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgg 27711718  T
Q  616 gacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnnc 715  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  27711719 gacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagtttttttc 27711818  T
Q  716 attatacactagtgttcc 733  Q
    ||||||||||||||||||    
T  27711819 attatacactagtgttcc 27711836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 180 - 575
Target Start/End: Original strand, 5730065 - 5730446
Alignment:
Q  180 atttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaag 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  5730065 attttaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaaattgtgcaag 5730164  T
Q  280 gtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 379  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| | | ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  5730165 gtagactagcaaccgcaccgtctccaggataaaacagcacagattctatctgtacgattaaaggctacactgccaaaaatcgctcgagaataacacctca 5730264  T
Q  380 atatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataa 479  Q
    |||||           ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||    
T  5730265 atatg-----------gtttcgaaaaaccactctaatatggtacacagaccactcgagaaaccaaagaaggaggaataaaagaacggttcgtcaacacaa 5730353  T
Q  480 accgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | | |||||||||||| |||||||    
T  5730354 acc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatgcaaatcccgagctctctatttata 5730446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 3584566 - 3584942
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  3584566 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaaattgtgcaaggtaga 3584665  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  3584666 ctagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactaccataaatcgctcgacaataacacctcaatatg 3584765  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgc 484  Q
               ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||      
T  3584766 -----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaacc-- 3584852  T
Q  485 gggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
      |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | | ||| |||||||| |||||||    
T  3584853 --gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatgcaaatcctgagctctctatttata 3584942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 167 - 460
Target Start/End: Complemental strand, 11387978 - 11387666
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11387978 tgttgtttttgtaatttgaaaattacaacagagctttgaaactattatcggggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacc 11387879  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctcc-------------------aggataaaacagcccagatgccaactgtacgattaaaggctgc 347  Q
    ||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||| | |||||||||||||||||||||    
T  11387878 taagttgtgcaaggtagactagcaaccgcgccgtctcctagcaaccgcgccatctccaggataaaacagcccagattctaactgtacgattaaaggctgc 11387779  T
Q  348 actgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga 447  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11387778 actggcagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga 11387679  T
Q  448 aggaggaaagaaa 460  Q
    |||||||||||||    
T  11387678 aggaggaaagaaa 11387666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 167 - 585
Target Start/End: Complemental strand, 48246823 - 48246427
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||   |       |||||||||||||||||||||||||    
T  48246823 tgttgtttttgtaatttgaaa-ttacgatagagctttgaaactattaccggggtgagtcacgacagag-------ctttaagacgtttcgcggcactacc 48246732  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||| |||||||||||||||||    
T  48246731 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcattgccagaaatcgctcga 48246632  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||           ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  48246631 gaataacacctcaatatg-----------gtttcaaaaaaccactcttatatggtacgtagaccactcggtaaaccaaagaaggaggaagaaaagaacgg 48246543  T
Q  467 ttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    |||||||||| |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| |||||| |||||||||| | ||| ||||| ||    
T  48246542 ttcgtcaacacaaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttgtagtgaagaatcccatttccgaggtc 48246447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 504 - 707
Target Start/End: Complemental strand, 34318043 - 34317840
Alignment:
Q  504 agaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatc 603  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34318043 agaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatc 34317944  T
Q  604 tacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactc 703  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317943 tacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactc 34317844  T
Q  704 caag 707  Q
    ||||    
T  34317843 caag 34317840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 458 - 707
Target Start/End: Complemental strand, 36684516 - 36684270
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  36684516 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtcaagaatactattc 36684420  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684419 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 36684320  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684319 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 36684270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 180 - 473
Target Start/End: Original strand, 5724939 - 5725221
Alignment:
Q  180 atttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaag 279  Q
    |||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5724939 attttaaaattacgacagagctttgaaattattatcgaggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaag 5725038  T
Q  280 gtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 379  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725039 gtagactagcaaccgcgccgtctccaggataaaacagcacagattctatctgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 5725138  T
Q  380 atatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 473  Q
    |||||           ||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||||  |||||| |||||||||    
T  5725139 atatg-----------gtttcgaaaaaccactctaatatggtacgcaggccactcgagaaaccaaagaagaaggaagaaaagaatggttcgtca 5725221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 36684858 - 36684644
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||   |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  36684858 tttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 36684759  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  36684758 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 36684659  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  36684658 acacctcgatatggt 36684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 168 - 379
Target Start/End: Complemental strand, 34318373 - 34318160
Alignment:
Q  168 gttgtatttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 265  Q
    ||||| |||||||||||||||| |||||  ||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  34318373 gttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaagtcgctctctttaagacgtttcgcggcactac 34318274  T
Q  266 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcg 365  Q
    || | |||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||    
T  34318273 ctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccaaattcttactgtacgattaaaggctgcactgccagaaatcgctcg 34318174  T
Q  366 agaataacacctca 379  Q
    | ||| ||||||||    
T  34318173 aaaatgacacctca 34318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 5725365 - 5725512
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725365 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 5725464  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||  ||||||||||||||||       |||||||||||||||||||    
T  5725465 aaaccaactagtatactccaagttttttccattatacactagtgttcc 5725512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 3585301 - 3585448
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3585301 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacattttacactagtttctccatccttgtgtttacattccaaaggctccac 3585400  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||  ||||||||||||||||       || ||||||||||||||||    
T  3585401 aaaccaactagtatactccaagttttttccaatatacactagtgttcc 3585448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 586 - 732
Target Start/End: Original strand, 5730771 - 5730917
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  5730771 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggtttcac 5730870  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttc 732  Q
    ||||  |||||||||||||||        ||||||||||||||||||    
T  5730871 aaaccaactagtatactccaaattttttccattatacactagtgttc 5730917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 212 - 323
Target Start/End: Original strand, 10106095 - 10106206
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  10106095 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 10106194  T
Q  312 aacagcccagat 323  Q
    |||| |||||||    
T  10106195 aacaacccagat 10106206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 39747270 - 39747157
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  39747270 attatcgggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactagcaaccacgtcgtctccaggat 39747171  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  39747170 aaaacagcccagat 39747157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 586 - 707
Target Start/End: Complemental strand, 48246119 - 48245998
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  48246119 ctactagagtgtgtgatctacccaatgtgggacataaaaattttaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 48246020  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||||||||||    
T  48246019 ataacaactagtatactccaag 48245998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 212 - 323
Target Start/End: Original strand, 13890805 - 13890916
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||    
T  13890805 taccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactacccaagttgtgcaaggtagactaacaaccacaccgtctccaggataa 13890904  T
Q  312 aacagcccagat 323  Q
    ||||||||||||    
T  13890905 aacagcccagat 13890916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 38734265 - 38734378
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||    
T  38734265 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaggat 38734364  T
Q  310 aaaacagcccagat 323  Q
    ||||||| ||||||    
T  38734365 aaaacagtccagat 38734378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 26651271 - 26651160
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| ||||||||||||||||| || ||||||||| |||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  26651271 attatcgggttgagtcacgaccaggtcactctctttaagatgttttgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 26651172  T
Q  310 aaaacagcccag 321  Q
    ||||||||||||    
T  26651171 aaaacagcccag 26651160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 5602530 - 5602417
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||| ||||||||||| |||    
T  5602530 attaccgggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaagat 5602431  T
Q  310 aaaacagcccagat 323  Q
    ||||||| ||||||    
T  5602430 aaaacagtccagat 5602417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 14582089 - 14582202
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| ||||| |||| ||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||| ||||| | |||||||||||||    
T  14582089 attatcgggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactaccctagttgtgcaaggtagactaacaaccacaccgtctccaggat 14582188  T
Q  310 aaaacagcccagat 323  Q
    ||||||| ||||||    
T  14582189 aaaacagtccagat 14582202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 648 - 707
Target Start/End: Complemental strand, 50959069 - 50959010
Alignment:
Q  648 gtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50959069 gtttctccattcttgtgtttacattccaaaggctccacaaactcactagtatactccaag 50959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 10135455 - 10135551
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| || |||||||||| |||| | ||||| ||||| ||| |||||||||||    
T  10135455 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctctaggataaaaca 10135551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 19422983 - 19422866
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaag----gtagactagcaaccgcgccgtctcca 305  Q
    ||||| ||| |||||||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||||||    |||||||| ||||  |||| ||||||    
T  19422983 attactgggttgagtcacgatcagatcgctctctttaagacgtttcgctgcactacccaagttgtgcaaggtaggtagactaacaactacgccatctcca 19422884  T
Q  306 ggataaaacagcccagat 323  Q
    |||||||| |||||||||    
T  19422883 ggataaaatagcccagat 19422866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 41098055 - 41097946
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||||||||||||||||||||||||||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  41098055 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 41097957  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  41097956 aaacagcccag 41097946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 51041557 - 51041463
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| | |||||||||||||| |||||| || || |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  51041557 tgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 51041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 27715000 - 27715046
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27715000 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 27715046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 19799109 - 19799013
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||| ||| ||||| |||||||||||||||| ||||||| || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  19799109 tgagtcacgatcagatcgctctctttaagacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 19799013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 23192913 - 23192817
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||| ||||| |||||| ||||| ||||  |||||||||||||||    
T  23192913 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataaaaca 23192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 25188368 - 25188272
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| | ||||| |||||||| |||| ||||||||||||||| | |||| ||||||||||||||| |||||| | |||||||| |||||||||    
T  25188368 tgagtcactatcaggttgctttcttgaagaagtttcgcggcactacttgagtttgtgcaaggtagactaacaaccgtgtcgtctccaagataaaaca 25188272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 33055038 - 33055139
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcc 318  Q
    |||||||| |||| |||||||||||||||||   || ||||||||||  || ||||||||||||||||| |||||| | || ||||||||||||||||||    
T  33055038 tgagtcacaaccatgtcgctttctttaagactaatcacggcactacccgagtttgtgcaaggtagactatcaaccgtg-cgcctccaggataaaacagcc 33055136  T
Q  319 cag 321  Q
    |||    
T  33055137 cag 33055139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 16035607 - 16035703
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||  ||||||| |||||||| ||||||  || ||||||||||||  ||| || ||||| ||||| |||||||||||||||    
T  16035607 tgagtcacgaccaggtcgccctctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataaaaca 16035703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 16649708 - 16649613
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| | ||||||  || || ||||||||| ||||||| ||||| ||||| |||| ||||||||||    
T  16649708 tgagtcacgaccaggtcgctctctttaagacgttt-gtggcactgtccaaaattgtgcaagatagactatcaaccacgccgcctccgggataaaaca 16649613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 33301272 - 33301180
Alignment:
Q  224 tcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| | |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  33301272 tcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 33301180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 40165979 - 40166075
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||  ||||| ||| |||||||||||    
T  40165979 tgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaacgccgcctctaggataaaaca 40166075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 47451321 - 47451225
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc-taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  |||||| ||  || |||||||||  |||||| ||||| ||||| ||||| |||||||||    
T  47451321 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaaca 47451225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 47455482 - 47455386
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||| |  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  47455482 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 47455386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 37405954 - 37405908
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  37405954 catcagtggcgtaccctttcccaacaaaattatcattcttagtgatg 37405908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 27711274 - 27711315
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaac 208  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  27711274 tgttgtttttgtaatttgaaaattacgacagagctttgaaac 27711315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 8267931 - 8267891
Alignment:
Q  215 cggggtgagtcacgaccaggtcgctttctttaagacgtttc 255  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  8267931 cgggttgagtcacgaccaggtcgctttctttaagacgtttc 8267891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 10140088 - 10140184
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||| ||||||||| ||||||| |||||||| |||||||| | || |||||||||| |||| | ||||| ||||  ||| |||||||||||    
T  10140088 tgagtcacgatcaggtcgctctctttaacacgtttcgtggcactactcaaaattgtgcaaggcagacaatcaaccacgccacctctaggataaaaca 10140184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 17031981 - 17032033
Alignment:
Q  85 atgtagatccaaatggtggtggtgcgacgaggcgcagcctccgcatcacctca 137  Q
    |||||||||  ||||||||||||||||||||| |||||||||||| |||||||    
T  17031981 atgtagatcttaatggtggtggtgcgacgaggagcagcctccgcaccacctca 17032033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 5728674 - 5728721
Alignment:
Q  737 catcagtggcgtaccctttcccaac-aaaaataccattcttagtgatg 783  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  5728674 catcagtggcgtaccctttcccaacaaaaaatatcattcttagtgatg 5728721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 25855170 - 25855213
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 263  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  25855170 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 25855213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 3094113 - 3094187
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaacc 293  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || |||||||||| |||||| |||||    
T  3094113 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 3094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 283
Target Start/End: Complemental strand, 4633022 - 4632958
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtag 283  Q
    ||||||||||| | |||||| |||||||||||||| ||||||||| || || |||||||||||||    
T  4633022 tgagtcacgactatgtcgctctctttaagacgttttgcggcactatccgaatttgtgcaaggtag 4632958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 12259995 - 12260091
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||| |||||||| |||||| |||||||||||||||| | ||||  || || |||||||||  |||||| ||||| ||||||||  |||||||||||    
T  12259995 tgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaaccacgccgtctttaggataaaaca 12260091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 39588461 - 39588370
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaa 312  Q
    |||||||| ||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| | ||| ||||  ||||||||||||    
T  39588461 agtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccaggataaa 39588370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 16832100 - 16832133
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtt 253  Q
    |||||||||||||||||||| |||||||||||||    
T  16832100 tgagtcacgaccaggtcgctctctttaagacgtt 16832133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 506; Significance: 0; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 167 - 700
Target Start/End: Original strand, 17368666 - 17369199
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368666 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 17368765  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  17368766 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 17368865  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368866 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 17368965  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368966 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctct 17369065  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369066 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 17369165  T
Q  667 tacattccaaaggctccacaaactcactagtata 700  Q
    |||||||||||||||||||||||  |||||||||    
T  17369166 tacattccaaaggctccacaaaccaactagtata 17369199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 174 - 707
Target Start/End: Original strand, 55128743 - 55129276
Alignment:
Q  174 tttgtaatttgaaaattacgacagagc--tttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||||||||||||||  |||||||| |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  55128743 tttgtaatttgaaaattacgacagagccttttgaaacaattatcggg-tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaagt 55128841  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  55128842 tgtgtaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatttcaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 55128941  T
Q  372 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgt 471  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55128942 acacctcaacatggttttcgaaaagtttcgaaaaaccactctaatatggtatgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgt 55129041  T
Q  472 caacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatt 571  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129042 caacacaaaccgcgggagggagaagagaggagagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatt 55129141  T
Q  572 tataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacat 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  55129142 tataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat-cttgtgtttacat 55129240  T
Q  672 tccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||    
T  55129241 tccaaaggctccacaaactcactagtatactccaag 55129276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 54270609 - 54270986
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54270609 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctaagttgtgcaaggtaga 54270708  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54270709 ctagcaaccgcgccgtctccaggataaaacagttcagattcaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 54270808  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacggttcgtcaacataaaccg 483  Q
    |||||           |||||||||||||||||||||  | ||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||     
T  54270809 gtttt-----------gaaaaaccactctaatatggtttgcagaccactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacacaaacc- 54270896  T
Q  484 cgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
       |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  54270897 ---gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 54270986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 34129299 - 34128923
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34129299 aaaattacgacagagctttgaaactattaccgggctgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtaga 34129200  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  34129199 ctagcaaccgcgccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcaccaccagaaatcgctcgagaataacacctcaatatg 34129100  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgc 484  Q
               ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||| |||||      
T  34129099 -----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggatgaagaaaagaacggttcgtcaacacaaacc-- 34129013  T
Q  485 gggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
      |||||||| ||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||||| | | |||||| ||||| |||||||    
T  34129012 --gagggagatgagaaggggagaaaaccagagaagaggattcgattctcagttttggagtgaagaatgcaaatcccgacctctctatttata 34128923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 4117730 - 4117345
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    ||||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  4117730 aaaattacgacggagcttcgaaaatattactggggtgagtcacgaccaggtcgctttcgttaagacatttcgcggcactacctaagttgtgcaaggtaga 4117631  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4117630 ctagcaaccgcgctgtctccaggataaaacagcccagattcaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcagtatg 4117531  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacggttcgtcaacataaaccg 483  Q
    | |||||||||  |||||||||||||| ||||||||| | |||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||     
T  4117530 g-tttcgaaaa--ttcgaaaaaccactgtaatatggttcatagaccactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacacaaacc- 4117435  T
Q  484 cgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
       |||||||| ||| ||| |||||||||| | ||||| ||||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  4117434 ---gagggagatgagaaggggagaaaaccaaagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 4117345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 180 - 575
Target Start/End: Complemental strand, 3482560 - 3482166
Alignment:
Q  180 atttgaaaattacgacagagcttt--gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 277  Q
    |||| ||||||||||||||| |||  ||||| |||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  3482560 atttaaaaattacgacagagttttttgaaacaattatcggagtgagtcacgaccaggtcgctttctttaagacttttcgcggcattacctaatttgtgca 3482461  T
Q  278 aggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3482460 aggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 3482361  T
Q  378 caatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggaggaaagaaagaacggttcgtcaaca 476  Q
    || ||||| |||||||||||||||||||||||||||||||||| |||||||||||| || || ||||| | ||||||||  |||||||||||||||||||    
T  3482360 cagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgtagaccacttgagaatccaaatagaggaggaagaaaagaacggttcgtcaaca 3482262  T
Q  477 taaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
     |||||    |||||||| ||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  3482261 caaacc----gagggagatgagaaggggagaaaaccagataagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 3482166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 17357801 - 17358179
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtg--caaggta 282  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||    
T  17357801 aaaattacgacaaagctttgaaactattaccgaggtgagtcacgaccaggtcgatttctttaagacgtttcgcggcactacctaaattgtgtgcaaggta 17357900  T
Q  283 gactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaata 382  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17357901 gactagcaaccgcgccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaata 17358000  T
Q  383 tggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaacc 482  Q
    ||           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||| |||||    
T  17358001 tg-----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaagaagaaaagaacggttcgtcaacacaaacc 17358089  T
Q  483 gcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
        |||||||| ||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||||| | | |||||||||||| |||||||    
T  17358090 ----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcagttttggagtgaagaatgcaaatcccgagctctctatttata 17358179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 180 - 575
Target Start/End: Complemental strand, 3477083 - 3476699
Alignment:
Q  180 atttgaaaattacgacagagcttt--gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 277  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3477083 atttaaaaattacgacagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 3476984  T
Q  278 aggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3476983 aggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 3476884  T
Q  378 caatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggaggaaagaaagaacggttcgtcaaca 476  Q
    || ||||           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||  |||||| ||||||||||||    
T  3476883 cagtatg-----------gtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagaggggaggaagaaaagaatggttcgtcaaca 3476795  T
Q  477 taaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
     |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||   |||||||||||||||| | |||||||||||||| |||||||    
T  3476794 caaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattcttgtttttggagtgaagaatcccattcccgagctctctatttata 3476699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 174 - 575
Target Start/End: Original strand, 10321396 - 10321784
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||| ||||||||||||||||||||||||||||| ||||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  10321396 tttggaatttgaaaattacgacagagctttgaaattattaccaggatcagtcacgaccaggtcgctttctttaagacgtttcgcggcactacttaaattg 10321495  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggat-aaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataa 372  Q
    |||||||||||||||||||||||  |||||||| || |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10321496 tgcaaggtagactagcaaccgcgttgtctccagaataaaaacagcccagattccatctgtacgattaaaggctgcactgccagaaatcgctcgagaataa 10321595  T
Q  373 cacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtc 472  Q
    ||||||||||||           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||    
T  10321596 cacctcaatatg-----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtc 10321684  T
Q  473 aacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatt 571  Q
    |||| |||||    |||||||| ||| ||| ||||||||| || ||||| |||| |||||| ||||||||||||||||| | | |||||||||||| |||    
T  10321685 aacacaaacc----gagggagatgagaaggggagaaaacctgagaagaggattcaattctcggttttggagtgaagaatgcaaatcccgagctctctatt 10321780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 458 - 733
Target Start/End: Complemental strand, 20090463 - 20090191
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20090463 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 20090367  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20090366 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 20090267  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||  ||||||||| |||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  20090266 cctgatgtttacatgccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 20090191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 458 - 733
Target Start/End: Complemental strand, 20095588 - 20095316
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20095588 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 20095492  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20095491 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 20095392  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||  ||||||||| |||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  20095391 cctgatgtttacatgccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 20095316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 458 - 707
Target Start/End: Complemental strand, 15762831 - 15762585
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15762831 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 15762735  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15762734 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 15762635  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  15762634 ccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 15762585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 458 - 707
Target Start/End: Complemental strand, 15767992 - 15767746
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15767992 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 15767896  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15767895 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 15767796  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  15767795 ccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 15767746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 167 - 386
Target Start/End: Complemental strand, 30341993 - 30341773
Alignment:
Q  167 tgttgtatttgtaatttg-aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 265  Q
    |||||| |||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30341993 tgttgtttttggaatttggaaaattacgacagagctttgaaagtattatcggggtgagtcacgaccaggtcactttctttaagacgtttcgcggcactac 30341894  T
Q  266 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcg 365  Q
    |||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  30341893 ctaaattgtgtaaggtagactagcaaccgcaccatctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgctagaaatcgctcg 30341794  T
Q  366 agaataacacctcaatatggt 386  Q
    |||||||||||||||||||||    
T  30341793 agaataacacctcaatatggt 30341773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 178 - 386
Target Start/End: Complemental strand, 20090801 - 20090591
Alignment:
Q  178 taatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtg 275  Q
    |||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  20090801 taatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtg 20090702  T
Q  276 caaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacac 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20090701 caaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatgacac 20090602  T
Q  376 ctcaatatggt 386  Q
    ||| |||||||    
T  20090601 ctcgatatggt 20090591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 178 - 386
Target Start/End: Complemental strand, 20095926 - 20095716
Alignment:
Q  178 taatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtg 275  Q
    |||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  20095926 taatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtg 20095827  T
Q  276 caaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacac 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20095826 caaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatgacac 20095727  T
Q  376 ctcaatatggt 386  Q
    ||| |||||||    
T  20095726 ctcgatatggt 20095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 15763173 - 15762959
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||   |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |      
T  15763173 tttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaac 15763074  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  15763073 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatt 15762974  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  15762973 acacctcgatatggt 15762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 15768334 - 15768120
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||   |||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||| |      
T  15768334 tttgtaatttgaaaatatacgatgaagcttttgaaactattactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaac 15768235  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  15768234 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 15768135  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  15768134 acacctcgatatggt 15768120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 185 - 323
Target Start/End: Original strand, 17364028 - 17364168
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt--tgtgcaaggta 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  17364028 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggta 17364127  T
Q  283 gactagcaaccgcgccgtctccaggataaaacagcccagat 323  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17364128 gactagcaaccgcgccgtctccaggataaaacagcccagat 17364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 3481796 - 3481649
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481796 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 3481697  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||||||||||||||||||||       |||||||||||||||||||    
T  3481696 aaactcactagtatactccaagtttttttcattatacactagtgttcc 3481649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 586 - 707
Target Start/End: Complemental strand, 34128558 - 34128437
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34128558 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 34128459  T
Q  686 aaactcactagtatactccaag 707  Q
    |||   ||||||||||||||||    
T  34128458 aaatcaactagtatactccaag 34128437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 586 - 707
Target Start/End: Original strand, 17358566 - 17358686
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17358566 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacacta-tttctccatccttgtgtttacattccaaaggctccac 17358664  T
Q  686 aaactcactagtatactccaag 707  Q
    ||||  ||||||||| ||||||    
T  17358665 aaaccaactagtataatccaag 17358686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 586 - 707
Target Start/End: Complemental strand, 30338247 - 30338126
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30338247 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactaatttctccatccttgtgtttacattccaaaggctccac 30338148  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||||||||||    
T  30338147 ataacaactagtatactccaag 30338126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 30341351 - 30341204
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341351 ctactagagtgtgtgatctacctaatgtgggccataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 30341252  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  30341251 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 30341204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 586 - 707
Target Start/End: Original strand, 54271312 - 54271433
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54271312 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttagactagtttctccatccttgtgtttacattccaaaggctccac 54271411  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||||| ||||    
T  54271412 ataacaactagtatacttcaag 54271433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 13022017 - 13022130
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  13022017 attatcgggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 13022116  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  13022117 aaaacagcccagat 13022130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 33089448 - 33089335
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||| |||||    
T  33089448 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctagttgtgcaaggtagactaacaaccacgccgtctctaggat 33089349  T
Q  310 aaaacagcccagat 323  Q
    |||||||| |||||    
T  33089348 aaaacagctcagat 33089335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 586 - 676
Target Start/End: Complemental strand, 3476339 - 3476249
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 676  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  3476339 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaa 3476249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 586 - 676
Target Start/End: Complemental strand, 4117097 - 4117007
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 676  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  4117097 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttcttcatcattgtgtttacattccaa 4117007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 38437096 - 38436983
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||| | |||||||| ||||||||||| ||||| |||||||||||||||    
T  38437096 attaccgggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatccaagttgtgaaaggtagactaacaaccacgccgtctccaggat 38436997  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  38436996 aaaacagcccagat 38436983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 53119517 - 53119630
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||||||| |||||    
T  53119517 attaccgggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactcaagttgtgcaaggtagactaacaaccacgccgtctctaggat 53119616  T
Q  310 aaaacagcccagat 323  Q
    ||||||| ||||||    
T  53119617 aaaacaggccagat 53119630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 20810362 - 20810475
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||||||||||| | ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||||    
T  20810362 attatcgggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaggat 20810461  T
Q  310 aaaacagcccagat 323  Q
    |||||||| |||||    
T  20810462 aaaacagctcagat 20810475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 26962049 - 26962162
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||| ||| |||||||||||||| ||||| |||||||||||||||| ||||||||  |||||||||||||||||||| ||| | |||||||||||||||    
T  26962049 attactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacacaagttgtgcaaggtagactaacaaacacgccgtctccaggat 26962148  T
Q  310 aaaacagcccagat 323  Q
    |||||||| |||||    
T  26962149 aaaacagcacagat 26962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 209 - 316
Target Start/End: Complemental strand, 2617363 - 2617255
Alignment:
Q  209 tattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccagg 307  Q
    |||||| ||| |||||||| |||| |||||||||||||||||||||||||||||||| | |  ||||||||||||||||| ||||||||||| |||||||    
T  2617363 tattacagggttgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccagg 2617264  T
Q  308 ataaaacag 316  Q
    |||||||||    
T  2617263 ataaaacag 2617255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 220 - 317
Target Start/End: Complemental strand, 21494398 - 21494300
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 317  Q
    |||||||||||||||||||| ||||||||| || || || || |||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||    
T  21494398 tgagtcacgaccaggtcgctctctttaagatgtatcacgacagtacccaagtttgtgcaaggtagactaacaaccgcgccgtctccgggataaaacagc 21494300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 758464 - 758368
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||| || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  758464 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 758368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 23666219 - 23666123
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  23666219 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23666123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 24038467 - 24038371
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  24038467 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 24038371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 39775824 - 39775728
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  39775824 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 39775728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 8069677 - 8069772
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  | || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  8069677 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 8069772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 10586286 - 10586177
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||||||||||||||||||||||||||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  10586286 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 10586188  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  10586187 aaacagcccag 10586177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 3672583 - 3672679
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  3672583 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 3672679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 3692615 - 3692711
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  3692615 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 3692711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 14438791 - 14438695
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||  |||||||||||||||| ||||||| || || |||||||||| |||| | ||||| ||||| |||||||||||||||    
T  14438791 tgagtcacgaccaggtcgccctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaca 14438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 18467222 - 18467318
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| ||||||  |||| ||||| |||||||||||||||    
T  18467222 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataaaaca 18467318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 20520051 - 20520147
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||||||| || |||||||||||||||| |||||| || ||| |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  20520051 tgagtcacgaccaggtcactctctttaagacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctccaagataaaaca 20520147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 49971520 - 49971424
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||| | |||||||||||||||| ||||||| || || |||||||||| |||||| ||| | ||||| |||||||||||||||    
T  49971520 tgagtcacgaccaggtcgatctctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataaaaca 49971424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 299
Target Start/End: Complemental strand, 1688980 - 1688902
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccg 299  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  || |||||||||||||| || ||| |||||||    
T  1688980 agtcacgaccaggtcgctttctttaagacgttttgcggcactacccgagtttgtgcaaggtagattaacaatcgcgccg 1688902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 3478485 - 3478439
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3478485 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 3478439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 15764557 - 15764511
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15764557 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 15764511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 17362634 - 17362680
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17362634 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 17362680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 17367276 - 17367322
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17367276 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 17367322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 20092188 - 20092142
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20092188 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 20092142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 27605242 - 27605133
Alignment:
Q  209 tattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagg 307  Q
    ||||||| || ||||||||||||| |||||| |||||||||| |||||| ||||||||  || ||||||||||||||||| ||||  | ||| ||| |||    
T  27605242 tattaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctctagg 27605143  T
Q  308 ataaaacagc 317  Q
    ||||||||||    
T  27605142 ataaaacagc 27605133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 487 - 575
Target Start/End: Complemental strand, 30338595 - 30338506
Alignment:
Q  487 gagggagaagaga-ggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||||||| |||| || |||||||||||| ||||| ||||||||||| ||||||||||||||||| | | |||||||||||| |||||||    
T  30338595 gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatccaaatcccgagctctctatttata 30338506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 7571314 - 7571218
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||| | ||||| |||||||||||||||    
T  7571314 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgccgcctccaggataaaaca 7571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 8883168 - 8883263
Alignment:
Q  221 gagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||| | |||||||||||||||    
T  8883168 gagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaaca 8883263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 25726889 - 25726843
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  25726889 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacc 25726843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 795508 - 795399
Alignment:
Q  213 accggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg-tgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    |||||| ||||||||||||||  |||||| | ||||||||| | || |||| ||  ||||  |||||||||||||| |||||| |||| |||||||||||    
T  795508 accgggttgagtcacgaccagaccgctttatgtaagacgttgcacgacactgccagagtttatgcaaggtagactaacaaccgtgccgcctccaggataa 795409  T
Q  312 aacagcccag 321  Q
    ||||||||||    
T  795408 aacagcccag 795399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 3033641 - 3033737
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || |||||||||| |||||| ||||| | ||| ||| |||||||||||    
T  3033641 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctcaaggataaaaca 3033737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 3418992 - 3419088
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||  || ||||||||||||    
T  3418992 tgagtcacgaccaagtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcaggataaaaca 3419088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 12112733 - 12112641
Alignment:
Q  224 tcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||| |||||||| |||||||||||||||| ||||||  || ||||||||||||  |||||| ||||| | ||| |||||||||||||||    
T  12112733 tcacgactaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagacagactatcaaccacaccgcctccaggataaaaca 12112641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 18472005 - 18472100
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||| || ||| || |||||| |||||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  18472005 tgagtcacgaccaggtcgctctctttacgatgtt-cgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 18472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 29350237 - 29350333
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||  || || |||||||||| |||| | | |||  |||| |||||||||||||||    
T  29350237 tgagtcacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccaggataaaaca 29350333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 49359247 - 49359192
Alignment:
Q  54 cttttcctcaaatccaac-actattcatcacgatgtagatccaaatggtggtggtg 108  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  49359247 ctttccctcaaatccaaccactatttatcacgatgtagatccaaatggtggtggtg 49359192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 26706808 - 26706877
Alignment:
Q  245 taagacgtttcgcggcactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaa 313  Q
    ||||||||||||| |||||| | ||||| ||||||||||||||| |||| |||||| |||||||||||||    
T  26706808 taagacgtttcgcagcactatccaagtttgtgcaaggtagactaacaactgcgccgcctccaggataaaa 26706877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 32474774 - 32474680
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||| ||||||||||||||| |||  ||||||||||| |||||| || ||  |||||||||  |||||| ||||| |||||||||||||||||||||    
T  32474774 tgagccacgaccaggtcgctctct--aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgtctccaggataaaaca 32474680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 8887927 - 8888023
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| |  |||||  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  8887927 tgagtcacgaccaggtcgctctctttaagacgttttgttgcactgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 8888023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 12965969 - 12965873
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| ||||||||||| ||||||||||||||   ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  12965969 tgagtcacaaccaggtcgctctctttaagacgttttatggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 12965873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 31002689 - 31002771
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccg 294  Q
    ||||||| ||||||||||| |||||||||||||||||||   || |||||||| || || ||||||||||||||||| ||||||    
T  31002689 taccgggttgagtcacgac-aggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccg 31002771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 45904552 - 45904442
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| ||||||||||||| |||| ||||||||||||   || | |||||| || || ||||||||||||||||| |||||| |  | || |||||||    
T  45904552 taccgggttgagtcacgaccatgtcgttttctttaagacaaatcacagcactacccgaaattgtgcaaggtagactaacaaccgtg-tgccttcaggata 45904454  T
Q  311 aaacagcccaga 322  Q
    ||||||||||||    
T  45904453 aaacagcccaga 45904442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 6024109 - 6024171
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagtt 272  Q
    ||||| ||| ||| ||| ||||||||| || | ||||||||||||||||||||||||||||||    
T  6024109 attactgggttgattcatgaccaggtctctctttttaagacgtttcgcggcactacctaagtt 6024171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 25024003 - 25023929
Alignment:
Q  237 gctttctttaagacgtttcgcggcactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    |||||| || ||||||||| || |||||||| |||| ||||||||||||||| |||||| |||| ||||||||||    
T  25024003 gctttccttgagacgtttcacgacactacctcagtttgtgcaaggtagactaacaaccgtgccgcctccaggata 25023929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 1741178 - 1741109
Alignment:
Q  247 agacgtttcgcggcactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||| |||||||| |||| |||||||| | | || ||||||||||| |||||||||||||||    
T  1741178 agacgtttcgcgacactacctgagtttgtgcaaggcaaattaacaaccgcgccgcctccaggataaaaca 1741109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 29715641 - 29715737
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| | |||||||||||||| | ||||  || || |||||| ||| |||||| ||||| ||||| ||| |||||||||||    
T  29715641 tgagtcacgaccagatcgctctttttaagacgtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctctaggataaaaca 29715737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 27708875 - 27708918
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 263  Q
    |||||||||||||||||| | |||||||||||||||| ||||||    
T  27708875 tgagtcacgaccaggtcgttctctttaagacgtttcgtggcact 27708918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 30341771 - 30341720
Alignment:
Q  524 tcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    ||||||||| ||||||||||||||||| | | |||||||||||| |||||||    
T  30341771 tcgattctcggttttggagtgaagaatcccaatcccgagctctctatttata 30341720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 53358242 - 53358277
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttc 255  Q
    ||||||||| ||||||||||||||||||||||||||    
T  53358242 tgagtcacggccaggtcgctttctttaagacgtttc 53358277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 550
Target Start/End: Original strand, 10321816 - 10321861
Alignment:
Q  505 gaaaaccagataagagtattcgattctcagttttggagtgaagaat 550  Q
    |||||||||| ||||| ||||||||||| ||||||| |||||||||    
T  10321816 gaaaaccagagaagaggattcgattctcggttttggggtgaagaat 10321861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 27708988 - 27709029
Alignment:
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| ||||| |||||||||||||||    
T  27708988 tgcaaggtagactatcaaccacgccgcctccaggataaaaca 27709029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 470; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 167 - 733
Target Start/End: Original strand, 40392266 - 40392832
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| ||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||   | ||||||||||||||||||||||||||||    
T  40392266 tgttgtttttgtaatttgaaaattacgatagaattttgaaactattatcggggtgagtcacgaccagactgttttctttaagacgtttcgcggcactacc 40392365  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  40392366 taagttgtgcaaggtagactagcaaccacgccgtctccaggataaaacagcccaaattctaactgtacgattaaaggctgcactgccagaaatcgctcga 40392465  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392466 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 40392565  T
Q  467 ttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctct 566  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392566 ttcgtcaacacaaaccgcgggagggagaagagaggagagaaaatcagagaaaagtattcgattctcagttttggagtgaagaatactattcccgagctct 40392665  T
Q  567 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtt 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40392666 caatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtt 40392765  T
Q  667 tacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  40392766 tacattgcaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 40392832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 167 - 707
Target Start/End: Complemental strand, 40518620 - 40518075
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518620 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 40518521  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  40518520 taaatagtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccaaaaatcgctcga 40518421  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaacc-aaagaaggaggaaagaaagaacg 465  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  40518420 gaataacacctcaatatggttttcaaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaagaaggagg-aagaaagaacg 40518322  T
Q  466 gttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40518321 gttcgtcaacacaaaccgctggagggagaagagaggagagaaaacaagagaagagtattcgattctcagttttggagtgaagaatactattcacgagctc 40518222  T
Q  566 tcaattt----ataaggaggatttctactagagtgtgtgatcta-cccgatgtgggacataaaattttcaattcacactttacactagtttctccatcct 660  Q
    |||||||    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518221 tcaatttattaataaggaggatttctactagagtgtgtgatctaccccgatgtgggacataaaattttcaattcacactttacactagtttctccatcct 40518122  T
Q  661 tgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  40518121 tgtgtttatattccaaaggctccacaaactcactattatactccaag 40518075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 167 - 575
Target Start/End: Complemental strand, 28751877 - 28751483
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28751877 tgttgtttttgtaatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttcttttagacgtttcgcggcactacc 28751778  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  28751777 taagttgtgcaaggtagacaagcaaccgcaccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 28751678  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    |||||||||||||||||||||||           |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||    
T  28751677 gaataacacctcaatatggtttt-----------gaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacgg 28751589  T
Q  467 ttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    |||||||||| |||||    |||||||| ||| ||| |||||||||| | ||||| ||||||||||| |||||||||||||||||   ||||||||||||    
T  28751588 ttcgtcaacacaaacc----gagggagatgagaaggggagaaaaccaaagaagaggattcgattctcggttttggagtgaagaatctcattcccgagctc 28751493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 458 - 707
Target Start/End: Complemental strand, 42728421 - 42728175
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42728421 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 42728325  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728324 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 42728225  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42728224 ccttgtgtttacattccaaaggctccacaaactcactagtaaactccaag 42728175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 503 - 706
Target Start/End: Complemental strand, 42723210 - 42723007
Alignment:
Q  503 gagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgat 602  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723210 gagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgat 42723111  T
Q  603 ctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatact 702  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42723110 ctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtaaact 42723011  T
Q  703 ccaa 706  Q
    ||||    
T  42723010 ccaa 42723007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 44096596 - 44096842
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  44096596 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtaaagaatactattc 44096692  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44096693 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 44096792  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  44096793 ccttttgtttacattccaaatgctccacaaactcactagtatactccaag 44096842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 516 - 707
Target Start/End: Complemental strand, 44754352 - 44754161
Alignment:
Q  516 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgg 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754352 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgg 44754253  T
Q  616 gacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  44754252 gacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 44754161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 516 - 707
Target Start/End: Complemental strand, 44759518 - 44759327
Alignment:
Q  516 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgg 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44759518 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgg 44759419  T
Q  616 gacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  44759418 gacataaaattttcaattcacactttacactaatttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaag 44759327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 516 - 704
Target Start/End: Original strand, 40519929 - 40520122
Alignment:
Q  516 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttat----aaggaggatttctactagagtgtgtgatctaccc-ga 610  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||| ||    
T  40519929 aagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttattcataaggaggatttctactagagtgtgtgatctaccccga 40520028  T
Q  611 tgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactcc 704  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520029 tgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactcc 40520122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 42723594 - 42723380
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  42723594 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 42723495  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  42723494 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 42723395  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  42723394 acacctcgatatggt 42723380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 42728763 - 42728549
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  42728763 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 42728664  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  42728663 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 42728564  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  42728563 acacctcgatatggt 42728549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 166 - 386
Target Start/End: Original strand, 44096246 - 44096468
Alignment:
Q  166 gtgttgtatttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 263  Q
    ||||||| |||||||||| ||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  44096246 gtgttgtttttgtaatttaaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcact 44096345  T
Q  264 acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgct 363  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  44096346 acctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgct 44096445  T
Q  364 cgagaataacacctcaatatggt 386  Q
    ||||||| ||||||| |||||||    
T  44096446 cgagaatgacacctcgatatggt 44096468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 44754739 - 44754525
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||   |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  44754739 tttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 44754640  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  44754639 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 44754540  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  44754539 acacctcgatatggt 44754525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 44759905 - 44759691
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||   |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  44759905 tttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 44759806  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  44759805 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 44759706  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  44759705 acacctcgatatggt 44759691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 4163042 - 4162895
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4163042 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 4162943  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||  ||||||||||||||||       |||||||||| ||||||||    
T  4162942 aaaccaactagtatactccaagttttttccattatacaccagtgttcc 4162895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 28751168 - 28751021
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751168 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 28751069  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  28751068 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 28751021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 396 - 575
Target Start/End: Complemental strand, 4163507 - 4163331
Alignment:
Q  396 gtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaa 495  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||    ||||||||     
T  4163507 gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaacc----gagggagat 4163412  T
Q  496 gag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | | |||||||||||| |||||||    
T  4163411 gagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatgcaaatcccgagctctctatttata 4163331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 210 - 320
Target Start/End: Original strand, 42914632 - 42914742
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  42914632 attagcgggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcactacctaagttgtgcaaggtagactaacaaccacgccgtctccaggat 42914731  T
Q  310 aaaacagccca 320  Q
    |||||||||||    
T  42914732 aaaacagccca 42914742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 33 - 159
Target Start/End: Complemental strand, 36594355 - 36594228
Alignment:
Q  33 aaaaccacacctcggttttcgcttttcctcaaatccaac-actattcatcacgatgtagatccaaatggtggtggtgcgacgaggcgcagcctccgcatc 131  Q
    ||||||||||| | |||||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |    
T  36594355 aaaaccacaccgccgttttcccttttcctcaaatccaaccactattaatcacgatgtagatccaaatgatggtggtgcgatgaggcgcggcctccgcaac 36594256  T
Q  132 acctcatctccggcgtccctcatcctat 159  Q
    |||||| ||| | |||||||||||||||    
T  36594255 acctcacctctgtcgtccctcatcctat 36594228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 220 - 318
Target Start/End: Original strand, 5089278 - 5089376
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcc 318  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5089278 tgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 5089376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 30658262 - 30658358
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| | || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  30658262 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 30658358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 9180820 - 9180724
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  9180820 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9180724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 10160820 - 10160724
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  10160820 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 10160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 1935089 - 1934993
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  1935089 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 1934993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 9189899 - 9189803
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  9189899 tgagtcacgaccaggttgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9189803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 18344430 - 18344526
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| ||||||  |||| ||||| |||||||||||||||    
T  18344430 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataaaaca 18344526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 11658984 - 11658882
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcc 318  Q
    ||||||| ||||| ||||||||||||||||| |||| ||||||||| | || ||||||||||||||||| |||| || ||| ||||| |||||||||| |    
T  11658984 tgagtcatgaccaagtcgctttctttaagacatttcacggcactactcgaatttgtgcaaggtagactaacaactgcaccgcctccatgataaaacagtc 11658885  T
Q  319 cag 321  Q
    |||    
T  11658884 cag 11658882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 42724986 - 42724940
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42724986 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 42724940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 44756138 - 44756092
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44756138 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 44756092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 19538377 - 19538458
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaac 292  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| |||||||| || |  ||||||||||||||||| ||||    
T  19538377 taccgggttgagtcacgaccaggtcgctttctttaagacatttcacggcactatccgagtttgtgcaaggtagactaacaac 19538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 212 - 315
Target Start/End: Complemental strand, 6297989 - 6297886
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||||||||||||||||||||||||||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  6297989 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 6297891  T
Q  311 aaaca 315  Q
    |||||    
T  6297890 aaaca 6297886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 30650928 - 30651024
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  30650928 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 30651024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 28854996 - 28855077
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaac 292  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||| |||||||| | ||| |||| |||||||||||| ||||    
T  28854996 taccgggttgagtcacaacccggtcgctttctttaagacgtttcacggcactatccaagtttgtacaaggtagactaacaac 28855077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 12796924 - 12797020
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| |||||||||||||| | ||||||  || || |||| ||||  |||||| ||||| |||||||||||||||||||||    
T  12796924 tgagtcacgaccagatcgctctctttaagacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccaggataaaaca 12797020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 19578510 - 19578414
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| |||||||||||||| | |||||||||| || |||||||||| |||||| |||||  || | ||||||| |||||||    
T  19578510 tgagtcacgaccagatcgctctctttaagacgttttgtggcactacctaaaattgtgcaaggaagactatcaaccatgctgcctccagggtaaaaca 19578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 19892562 - 19892466
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || ||||||||   |||||| ||||| ||||| |||||||||||||||    
T  19892562 tgagtcacgaccaggtcgctctctttaagacgtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccaggataaaaca 19892466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 25478393 - 25478297
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| ||||||||||| |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||||| |||||| ||||||||    
T  25478393 tgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaaca 25478297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 25497421 - 25497325
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| ||||||||||||||||   ||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  25497421 tgagtcacgaccaggtcgctctctttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccaggataaaaca 25497325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 31326738 - 31326834
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  | ||||  || || |||||||||| |||||| ||||| ||||  |||||||||||||||    
T  31326738 tgagtcacgaccaggtcgctctctttaagacgtttcatgccactgcccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaaca 31326834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 4163564 - 4163525
Alignment:
Q  179 aatttgaaaattacgacagagctttgaaactattaccggg 218  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4163564 aatttgaaaattacgacagagctttgaaactattaccggg 4163525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 39542901 - 39543004
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggt-agactagcaaccgcgccgtctccaggataaaacagc 317  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||| | || ||||| ||||| |||||| |||||||   | ||||||||||||| |||    
T  39542901 tgagtcacgatcaggtcgctctctttaagacgtttcacggcactacatgagtttgtgtaaggtaagactaacaaccgcattgcctccaggataaaatagc 39543000  T
Q  318 ccag 321  Q
    ||||    
T  39543001 ccag 39543004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 29677380 - 29677474
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 313  Q
    |||||||||| || |||||| |||||||||||||||| ||||||  || || |||||||| | |||||| ||||| ||||| |||||||||||||    
T  29677380 tgagtcacgatcatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccaggataaaa 29677474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 220 - 316
Target Start/End: Original strand, 160040 - 160137
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 316  Q
    |||| ||||||||||||||| ||||||| ||||||| || ||||| || || ||||||||||||| ||| |||||||| || ||||  ||||||||||    
T  160040 tgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctccgagataaaacag 160137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 28945181 - 28945266
Alignment:
Q  233 ggtcgctttctttaagacgtttcgcggcactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 317  Q
    ||||| ||| |||||||||||||||||||||||   |||| |||||||||| |||| ||||||||  | |||||||||||||||||    
T  28945181 ggtcgatttttttaagacgtttcgcggcactacacgagtttgtgcaaggtatactaacaaccgcgttgcctccaggataaaacagc 28945266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 7737947 - 7737851
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||| |||||| ||||||||| |||| | |||||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  7737947 tgagtcacgaccatgtcgctctctttaagaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 7737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 35601925 - 35602017
Alignment:
Q  224 tcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||| | |||||||||||||| ||||||  || || |||||||||  ||| || ||||| ||||| |||||||||||||||    
T  35601925 tcacgaccaggtcgctctttttaagacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccaggataaaaca 35602017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 311
Target Start/End: Complemental strand, 42926857 - 42926763
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagac--gtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 311  Q
    |||||||||| |||| |||| ||||||||||  |||||| |||||| || ||  ||||||||||||||||| ||||| ||||| |||||||||||    
T  42926857 tgagtcacgatcaggccgctctctttaagacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccaggataa 42926763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 22844814 - 22844862
Alignment:
Q  216 ggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    ||||||||||||||||| ||||||||||||||||| |||| || |||||    
T  22844814 ggggtgagtcacgaccatgtcgctttctttaagacatttcacgccacta 22844862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 29907470 - 29907368
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| | |||||||||||||||| | | |||||||||||||||| |||||   || ||||| |||||   ||| ||||  ||||| |||||||||    
T  29907470 attaccgggttaagtcacgaccaggtcgatctttttaagacgtttcgcgacactattaaaattgtgtaaggt---ctatcaactacgccgcctccaggat 29907374  T
Q  310 aaaaca 315  Q
    ||||||    
T  29907373 aaaaca 29907368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 210 - 311
Target Start/End: Complemental strand, 39542611 - 39542509
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccagga 308  Q
    |||||| || ||||||||||| | ||| || ||||||||||||||| |  |||||| | || ||||| ||||||||||| |||| |||| | ||||||||    
T  39542611 attaccaggttgagtcacgactaagtcactctctttaagacgtttcacaacactacttgaatttgtgtaaggtagactaacaactgcgctgcctccagga 39542512  T
Q  309 taa 311  Q
    |||    
T  39542511 taa 39542509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 180 - 575
Target Start/End: Complemental strand, 2234765 - 2234384
Alignment:
Q  180 atttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaag 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  2234765 attttaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggttgctttctttaagacgtttcgcggcactacctaaattgtgcaag 2234666  T
Q  280 gtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 379  Q
    |||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2234665 gtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 2234566  T
Q  380 atatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataa 479  Q
    |||||           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||    
T  2234565 atatg-----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaa 2234477  T
Q  480 accgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  2234476 acc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatactaatcccgagctctctatttata 2234384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 167 - 575
Target Start/End: Complemental strand, 16539559 - 16539166
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16539559 tgttgtttttgtaatttgaag-ttacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 16539461  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  16539460 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcga 16539361  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||| ||||           ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||  ||||||| |    
T  16539360 gaataacacctcagtatg-----------gtttcgaaaaaccactctaatatgacacgtagaccactcgagaaaccaaagaaggaggaagaaaagaactg 16539272  T
Q  467 ttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    |||||||||| |||||    |||||||| ||| | | |||||||||||| ||||| |||  |||||| ||||||||||||||||| | ||||||||||||    
T  16539271 ttcgtcaacacaaacc----gagggagatgagaatgggagaaaaccagagaagaggatttaattctcggttttggagtgaagaatcccattcccgagctc 16539176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 167 - 575
Target Start/End: Original strand, 16626103 - 16626496
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16626103 tgttgtttttgtaatttgaag-ttacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 16626201  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  16626202 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcga 16626301  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||| ||||           ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||  ||||||| |    
T  16626302 gaataacacctcagtatg-----------gtttcgaaaaaccactctaatatgacacgtagaccactcgagaaaccaaagaaggaggaagaaaagaactg 16626390  T
Q  467 ttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    |||||||||| |||||    |||||||| ||| | | |||||||||||| ||||| |||  |||||| ||||||||||||||||| | ||||||||||||    
T  16626391 ttcgtcaacacaaacc----gagggagatgagaatgggagaaaaccagagaagaggatttaattctcggttttggagtgaagaatcccattcccgagctc 16626486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 174 - 575
Target Start/End: Complemental strand, 21081182 - 21080793
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21081182 tttggaatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattg 21081083  T
Q  274 tg--caaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    ||  |||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||    
T  21081082 tgtgcaaggtagactagcaaccgcaccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagaaatcgctcgagaata 21080983  T
Q  372 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgt 471  Q
    |||||||||||||           ||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||||||  ||||||||||||||    
T  21080982 acacctcaatatg-----------gtttcaaaaaaccactctaatatggtacgtagaccacttaagaaaccaaagaaggaggaagaaaagaacggttcgt 21080894  T
Q  472 caacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaat 570  Q
    ||||| |||||    |||| ||| ||| ||| |||||||||||| ||||| |||||||||||||||||| |||||||||| | | |||||||||||| ||    
T  21080893 caacacaaacc----gaggaagatgagaaggggagaaaaccagagaagaggattcgattctcagttttgaagtgaagaatgcaaatcccgagctctctat 21080798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 180 - 575
Target Start/End: Original strand, 42571904 - 42572286
Alignment:
Q  180 atttgaaaattacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaa 278  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42571904 attttaaaattacgacggagcttttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaa 42572003  T
Q  279 ggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  42572004 ggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaaaattaaaggctgcactgccagaaatctctcgagaataacacctc 42572103  T
Q  379 aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacata 478  Q
    ||||||           |||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||   ||||||||||||||||||| |    
T  42572104 aatatg-----------gtttcgaaaaaccattcaaatatggttcgtagaccactcgagaaaccaaagaaggaggaggaaaagaacggttcgtcaacaca 42572192  T
Q  479 aaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    ||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||| |||| |||||||    
T  42572193 aacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagttctctatttata 42572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 12934363 - 12934738
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  12934363 aaaattacgacagagctttgaaactattaccggg-tgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctgagttgtgcaaggtaga 12934461  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  12934462 ctagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaagattaaaggttgcactgccagaaatctctcgagaataacacctcaatatg 12934561  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgc 484  Q
               ||||||||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||  |||||||||||| |||||| |||||      
T  12934562 -----------gtttcgaaaaaccactcaaatatggttcgtagaccactcgagaaaacaaagaaggaggaagaaaagaacggttcatcaacacaaacc-- 12934648  T
Q  485 gggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
      |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  12934649 --gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 12934738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 180 - 575
Target Start/End: Original strand, 43892816 - 43893210
Alignment:
Q  180 atttgaaaattacgacagagcttt--gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 277  Q
    |||| ||||||||| |||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43892816 atttaaaaattacgtcagagctttttgaaataattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcacggcactacctaagttgtgca 43892915  T
Q  278 aggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 377  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  43892916 aggtaaactagcaaccgcgccgtctccaggataaaacagctcagattcttactgtacgattaaaggttgcactgctagaaatcgctcgagaataacacct 43893015  T
Q  378 caatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggaggaaagaaagaacggttcgtcaaca 476  Q
    |  ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||  |||||||  |||||||| ||||||||||    
T  43893016 cggtatgg-tttcgaaaagtttcgaaaaaccactctagtatggcacgtagaccactcgagaaaccaaagaggggaggaagaaaagaacgattcgtcaaca 43893114  T
Q  477 taaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
     |||||    |||||||| ||| ||| |||||||||||| ||||| |||||||||||  |||||||||||||||| | |||||||||||||| |||||||    
T  43893115 caaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcgattttggagtgaagaatcccattcccgagctctctatttata 43893210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 185 - 575
Target Start/End: Original strand, 17495367 - 17495744
Alignment:
Q  185 aaaattacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtag 283  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17495367 aaaattacgacagagcttttgaaactattaccgaggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaagttgtgcaaggtag 17495466  T
Q  284 actagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatat 383  Q
    |||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  17495467 actagcaaccgcgccgtctccaagataaaacagcccagattcttactgtacgattaaaggcagcactgccagaaatcgctcgagaataacacctccatat 17495566  T
Q  384 ggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccg 483  Q
    |           ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||||||| |||||     
T  17495567 g-----------gtttcaaaaaaccactcttatatggtacgtagaccactcaagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaacc- 17495654  T
Q  484 cgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
       |||||||| ||| ||| |||||||||||| ||||| |||| |||||| |||||||||| |||||| | |||||||||||||| |||||||    
T  17495655 ---gagggagatgagaaggcgagaaaaccagagaagaggattcaattctcggttttggagtaaagaatcccattcccgagctctctatttata 17495744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 17557847 - 17557470
Alignment:
Q  185 aaaattacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtag 283  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17557847 aaaattacgacagagcttttgaaactattaccgaggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaagttgtgcaaggtag 17557748  T
Q  284 actagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatat 383  Q
    |||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  17557747 actagcaaccgcgccgtctccaagataaaacagcccagattcttactgtacgattaaaggcagcactgccagaaatcgctcgagaataacacctccatat 17557648  T
Q  384 ggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccg 483  Q
    |           ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||  ||||||||||||||||||| |||||     
T  17557647 g-----------gtttcaaaaaaccactcttatatggtacgtagaccactcaagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaacc- 17557560  T
Q  484 cgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
       |||||||| ||| ||| |||||||||||| ||||| |||| |||||| |||||||||| |||||| | |||||||||||||| |||||||    
T  17557559 ---gagggagatgagaaggcgagaaaaccagagaagaggattcaattctcggttttggagtaaagaatcccattcccgagctctctatttata 17557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 185 - 563
Target Start/End: Complemental strand, 32212784 - 32212419
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32212784 aaaattatgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtaga 32212685  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||| ||||||||||||||||||||||||| |   ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  32212684 ctagcaaccgcgctgtctccaggataaaacagcccagattctttctgtacgattaaaggttgcactgccagaaatcgctcgaaaataacacctcaatatg 32212585  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaag-aaggaggaaagaaagaacggttcgtcaacataaaccg 483  Q
               ||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||  |||||||||||| |||||| |||||     
T  32212584 -----------gtttcgaaaaaccactccaatatggtacgaagaccactcgagaaaccaaagaaaggaggaagaaaagaacggttcatcaacacaaacc- 32212497  T
Q  484 cgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagc 563  Q
       |||||||| ||| ||| ||||||| |||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||    
T  32212496 ---gagggagatgagaaggggagaaaatcagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagc 32212419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 458 - 733
Target Start/End: Original strand, 33238296 - 33238568
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33238296 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 33238392  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238393 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 33238492  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  33238493 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaagtttttttcattatacactagtgttcc 33238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 180 - 575
Target Start/End: Complemental strand, 19309746 - 19309365
Alignment:
Q  180 atttgaaaattacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaa 278  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  19309746 attttaaaattacgacggagcttttgaaactattaccggggtgagtc-caaccaggtcgctgtctttaagacgtttcgcggcaccacctaagttgtgcaa 19309648  T
Q  279 ggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||||||||||| |||||||||||||| ||    
T  19309647 ggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaacattaaaggctgcactgccagaaatctctcgagaataacacttc 19309548  T
Q  379 aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacata 478  Q
    ||||||           |||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||   ||||||| ||||||||||| |    
T  19309547 aatatg-----------gtttcgaaaaaccagtcaaatatggttcgtagaccactcgagaaaccaaagaaggaggaggaaaagaacagttcgtcaacaca 19309459  T
Q  479 aaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    ||||    |||||||| ||| ||| |||||||||||| ||||| ||| ||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  19309458 aacc----gagggagatgagaaggggagaaaaccagagaagaggatttgattctcggttttggagtgaagaatcccattcccgagctctctatttata 19309365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 47994094 - 47994340
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47994094 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 47994190  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994191 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 47994290  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994291 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 47994340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 503 - 733
Target Start/End: Original strand, 33243515 - 33243745
Alignment:
Q  503 gagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgat 602  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243515 gagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgat 33243614  T
Q  603 ctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatact 702  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33243615 ctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatgccaaaggctccacaaactcactagtatact 33243714  T
Q  703 ccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||       |||||||||||||||||||    
T  33243715 ccaagtttttttcattatacactagtgttcc 33243745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 47999269 - 47999515
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47999269 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 47999365  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47999366 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgagacataaaattttcaattcacactttacactagtttctccat 47999465  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  47999466 ccttatgtttacattccaaaggctccacaaactcactaatatactccaag 47999515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 180 - 411
Target Start/End: Complemental strand, 47177256 - 47177024
Alignment:
Q  180 atttgaaaattacgacagagcttt--gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 277  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47177256 atttaaaaattacgacagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 47177157  T
Q  278 aggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 377  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47177156 aggtagactagcaaccgcgccgtcttcaggataaaacagctcagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 47177057  T
Q  378 caatatggttttcgaaaagtttcgaaaaaccact 411  Q
    || ||||| |||||||||||||||||||||||||    
T  47177056 cagtatgg-tttcgaaaagtttcgaaaaaccact 47177024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 33237954 - 33238168
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  33237954 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 33238053  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  33238054 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 33238153  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  33238154 acacctcgatatggt 33238168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 33243131 - 33243345
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| | |    
T  33243131 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcactctctttaagacgtttcgcggcactacctgaat 33243230  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  33243231 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 33243330  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  33243331 acacctcgatatggt 33243345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 178 - 386
Target Start/End: Original strand, 47998931 - 47999141
Alignment:
Q  178 taatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtg 275  Q
    |||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  47998931 taatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtg 47999030  T
Q  276 caaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacac 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47999031 caaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatgacac 47999130  T
Q  376 ctcaatatggt 386  Q
    ||| |||||||    
T  47999131 ctcgatatggt 47999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 176 - 386
Target Start/End: Original strand, 47993754 - 47993966
Alignment:
Q  176 tgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||||||||||||| |||||  ||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| | |||    
T  47993754 tgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacaaccaggtcgctctctttaagacgtttcgcggcactacctgaattg 47993853  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||    
T  47993854 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatgac 47993953  T
Q  374 acctcaatatggt 386  Q
    ||||| |||||||    
T  47993954 acctcgatatggt 47993966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 21080468 - 21080321
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080468 ctactagagtgtgtgatctacccaacgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 21080369  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||  ||||||||||||||||       |||||||||||||||||||    
T  21080368 aaaccaactagtatactccaagttttttccattatacactagtgttcc 21080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 586 - 707
Target Start/End: Complemental strand, 2234099 - 2233978
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2234099 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccac 2234000  T
Q  686 aaactcactagtatactccaag 707  Q
    ||||  ||||||||||||||||    
T  2233999 aaaccaactagtatactccaag 2233978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 166 - 287
Target Start/End: Complemental strand, 22857836 - 22857715
Alignment:
Q  166 gtgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 265  Q
    ||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  22857836 gtgttgtttttgtaattttcaaattatgacagagctttgaaactattaccggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactat 22857737  T
Q  266 ctaagttgtgcaaggtagacta 287  Q
    ||||||||||||||||||||||    
T  22857736 ctaagttgtgcaaggtagacta 22857715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 32212112 - 32211965
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  32212112 ctactagagtgtgtgatctacccaatgtgagacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaagtctcaac 32212013  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  32212012 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 32211965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 42572600 - 42572747
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  42572600 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 42572699  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  42572700 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 42572747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 586 - 707
Target Start/End: Original strand, 17496100 - 17496221
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  17496100 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 17496199  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||||||||||    
T  17496200 ataacaactagtatactccaag 17496221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 586 - 707
Target Start/End: Complemental strand, 17557114 - 17556993
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  17557114 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 17557015  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||||||||||    
T  17557014 ataacaactagtatactccaag 17556993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 12935084 - 12935231
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  12935084 ctactaaagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 12935183  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  12935184 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 12935231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 19309023 - 19308876
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  19309023 ctactagagtgtgtgatctatccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 19308924  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  19308923 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 19308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 9973452 - 9973565
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||| |||||||||||||||    
T  9973452 attaccgggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatccaagttgtgcaaggtagacgaacaaccacgccgtctccaggat 9973551  T
Q  310 aaaacagcccagat 323  Q
    |||||| |||||||    
T  9973552 aaaacaacccagat 9973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 47176643 - 47176496
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  47176643 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 47176544  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  47176543 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 47176496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 24528344 - 24528457
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  24528344 attatcgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 24528443  T
Q  310 aaaacagcccagat 323  Q
    |||||||| |||||    
T  24528444 aaaacagctcagat 24528457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 222 - 323
Target Start/End: Original strand, 33226416 - 33226517
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccag 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||||||| |||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttcgcggcactacctaagttatgcaaggtagactaacaaccacgccgtcaccaggataaaacagctcag 33226515  T
Q  322 at 323  Q
    ||    
T  33226516 at 33226517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 593 - 707
Target Start/End: Complemental strand, 16538813 - 16538699
Alignment:
Q  593 agtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactca 692  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |   |    
T  16538813 agtgtgtgatctactcaatatgggacataaaattttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaa 16538714  T
Q  693 ctagtatactccaag 707  Q
    |||||||||||||||    
T  16538713 ctagtatactccaag 16538699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 593 - 707
Target Start/End: Original strand, 16626849 - 16626963
Alignment:
Q  593 agtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactca 692  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |   |    
T  16626849 agtgtgtgatctactcaatatgggacataaaattttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaa 16626948  T
Q  693 ctagtatactccaag 707  Q
    |||||||||||||||    
T  16626949 ctagtatactccaag 16626963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 586 - 733
Target Start/End: Original strand, 43893542 - 43893689
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| | |||| |    
T  43893542 ctactagagtgtgtgatctacccaatgagggacataaaattttcaattcacactttacgctagtttctacatcattgtgtttacattccaatgtctcctc 43893641  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  43893642 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 43893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 5888351 - 5888458
Alignment:
Q  61 tcaaatccaac-actattcatcacgatgtagatccaaatggtggtggtgcgacgaggcgcagcctccgcatcacctcatctccggcgtccctcatcctat 159  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |||    
T  5888351 tcaaatccaaccactattcatcacgatgtaaatccaattggtggtggggcgacgaggcgcggcctccgcatcacctcacctccggcgtccctcatcatat 5888450  T
Q  160 tcagtagt 167  Q
    || |||||    
T  5888451 tcggtagt 5888458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 28292607 - 28292496
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| | |||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||    
T  28292607 attaccgggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 28292509  T
Q  310 aaaacagcccagat 323  Q
     |||||||||||||    
T  28292508 -aaacagcccagat 28292496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 733
Target Start/End: Complemental strand, 47544828 - 47544749
Alignment:
Q  654 ccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||       |||||||||||||||||||    
T  47544828 ccatccttgtgtttacattccaaaggctccacaaactctctagtatactccaagtttttttcattatacactagtgttcc 47544749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 4579507 - 4579603
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  4579507 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 4579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 3357728 - 3357634
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcac-tacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 313  Q
    |||||||||||||||||||| ||||||||||||||||||| ||   || ||||||||||||| |||||| ||||| ||||||||||| |||||||    
T  3357728 tgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaaccacgccgtctccatgataaaa 3357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 27256234 - 27256343
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||||||||||||||||||||||||||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  27256234 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 27256332  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  27256333 aaacagcccag 27256343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 315
Target Start/End: Original strand, 8076040 - 8076145
Alignment:
Q  211 ttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||| |||||| ||| || |||||||||  |||||| ||||| ||| | |||||||||    
T  8076040 ttactgggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggat 8076139  T
Q  310 aaaaca 315  Q
    ||||||    
T  8076140 aaaaca 8076145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 9651063 - 9650967
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  9651063 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 9650967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 23247029 - 23246933
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  23247029 tgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23246933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 23866067 - 23866163
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  23866067 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 23866163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 26341198 - 26341294
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  26341198 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26341294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 36935161 - 36935090
Alignment:
Q  88 tagatccaaatggtggtggtgcgacgaggcgcagcctccgcatcacctcatctccggcgtccctcatcctat 159  Q
    ||||||||| |||| || |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  36935161 tagatccaattggtagtcgtgcgacgaggcgcggcctccgcatcacctcacctccggcatccctcatcctat 36935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 33241732 - 33241778
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33241732 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 33241778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 47997529 - 47997575
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47997529 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 47997575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 211 - 315
Target Start/End: Original strand, 12254069 - 12254174
Alignment:
Q  211 ttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||| || |||||| ||||||||||||| ||||||||| |||| | |||||| ||| ||||||||||||| |||||| ||| | ||||| || ||||||    
T  12254069 ttaccaggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaatcacgccgcctacaggat 12254168  T
Q  310 aaaaca 315  Q
    ||||||    
T  12254169 aaaaca 12254174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 487 - 575
Target Start/End: Complemental strand, 47176993 - 47176904
Alignment:
Q  487 gagggagaagaga-ggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||||||| |||| || |||||||||||| ||||| |||||||| || |||||||||||||||||   |||||||||||||| |||||||    
T  47176993 gagggagatgagaaggggagaaaaccagagaagaggattcgattatcggttttggagtgaagaatctcattcccgagctctctatttata 47176904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 4930232 - 4930328
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || ||||| |||  | |||| ||||| ||||| |||||||||||||||    
T  4930232 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccaggataaaaca 4930328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 13314332 - 13314236
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| |||||||||||||||| || |||  || || ||||||||||||||||| || || || || |||||||||||||||    
T  13314332 tgagtcacgaccagatcgctctctttaagacgtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgtcgcctccaggataaaaca 13314236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 44423233 - 44423137
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||| ||| ||||| |||||||||||||||| |||||| ||| || |||| ||||| |||||| ||||  ||||| |||||||||||||||    
T  44423233 tgagtcacgatcagatcgctctctttaagacgtttcgtggcactgaccaaaattgttcaaggcagactatcaactacgccgcctccaggataaaaca 44423137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 10388461 - 10388367
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| | |||| | || |||||||||| | ||||| | ||||  ||||| |||||||||||||||    
T  10388461 tgagtcacgaccaggtcgctctctttaagacgttttgtggcattgcccaagttgtgcatgatagac-atcaacaacgccgcctccaggataaaaca 10388367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 8268292 - 8268388
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| | ||||||  || || |||||||||  |||||| ||||| ||||  ||||| |||||||||    
T  8268292 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccatgataaaaca 8268388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 44510773 - 44510677
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| | ||| |||||||||||||| | ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  44510773 tgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 44510677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 19640298 - 19640395
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 317  Q
    |||||||||| || ||| |||||||||||||||||| || || ||||  || |||||||||||||||||  ||||| | || |||||||||||||||||    
T  19640298 tgagtcacgatcatgtctctttctttaagacgtttcacgacattacccgagtttgtgcaaggtagactaagaaccgtg-cgcctccaggataaaacagc 19640395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 40865456 - 40865351
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||| ||||||| |||||||||||||    || ||||||||| | || ||||||||||||||||| |||||| |  | ||||||||||    
T  40865456 taccgggttgagtcacaaccaggttgctttctttaagataaatcacggcactactcgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 40865358  T
Q  311 aaacagc 317  Q
    |||||||    
T  40865357 aaacagc 40865351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 27238241 - 27238337
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||| | |||||| | | || ||||| |||| |||||| ||| | ||||| || || |||||||||    
T  27238241 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgctcaaaattgtgtaaggcagactatcaatcacgccgcctgcaagataaaaca 27238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 42627289 - 42627214
Alignment:
Q  224 tcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgcc 298  Q
    |||||||||||||||| |||||||||||||||| ||||| | || || |||||||| | |||||| ||||| ||||    
T  42627289 tcacgaccaggtcgctctctttaagacgtttcgtggcacaacccaaaattgtgcaaagcagactatcaaccacgcc 42627214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 16372397 - 16372443
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    ||||||||||||| |||||| ||||||||| |||||| |||||||||    
T  16372397 tgagtcacgaccaagtcgctctctttaagatgtttcgtggcactacc 16372443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 255; Significance: 1e-141; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 167 - 575
Target Start/End: Complemental strand, 9356 - 8962
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9356 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 9257  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||    
T  9256 taagttgtgcaaggaagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaattgctcga 9157  T
Q  367 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 466  Q
    ||||||||||||||||||           ||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||  ||||||| |    
T  9156 gaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggtacgcaaaccactcgagaaaccaaacaaggaggaagaaaagaacag 9068  T
Q  467 ttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctc 565  Q
    |||||||||| |||||    |||||||| ||| ||| |||||||| ||| ||||| |||||||||||  |||||||||||||||| | ||||||||||||    
T  9067 ttcgtcaacacaaacc----gagggagatgagaaggggagaaaactagagaagaggattcgattctcgtttttggagtgaagaatcccattcccgagctc 8972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 8681 - 8534
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8681 ctactagagtgtgtgatctacccaatgtgggacataaaattttaaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 8582  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  8581 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 8534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 251; Significance: 1e-139; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 165 - 585
Target Start/End: Original strand, 36956 - 37361
Alignment:
Q  165 agtgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36956 agtgttgtttttgtaatttgaaa-ttacgacagagctttgaaactattactggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 37054  T
Q  265 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctc 364  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||| |||||||||    
T  37055 cctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactgccaaaaatcgctc 37154  T
Q  365 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaac 464  Q
    ||||||||||||||||||||           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  37155 gagaataacacctcaatatg-----------gtttcaaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaggaagaaaagaac 37243  T
Q  465 ggttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagc 563  Q
    |||||||||||| |||||    |||| ||| ||| ||| |||||||||||| ||||| ||||||||||| |||||||||||||||||   ||||||||||    
T  37244 ggttcgtcaacacaaacc----gaggaagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatctcattcccgagc 37339  T
Q  564 tctcaatttataaggaggattt 585  Q
    |||| |||||||  ||||||||    
T  37340 tctctatttatagagaggattt 37361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 586 - 644
Target Start/End: Original strand, 37654 - 37712
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttaca 644  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37654 ctactggagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttaca 37712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 47960 - 47851
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||||||||||||||||||| ||||||   ||  ||||||| || || ||||||||||||||||| |||||| |  | ||| ||||||    
T  47960 taccgggttgagtcacgaccaggtcgctttctataagacaaatcagggcactacccaaaattgtgcaaggtagactaacaaccgtg-tgcctcaaggata 47862  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  47861 aaacagcccag 47851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 174 - 575
Target Start/End: Complemental strand, 21644222 - 21643835
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21644222 tttgtaatttgaaaattacgacagagctttgaaagtattaccggggtgaatcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 21644123  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  21644122 tgcaaggtagactagcaaccgcgccgactccaggataaaacagcccagattctaactgtacgattaaaggctgcactgctagaaatcgctcgagaataac 21644023  T
Q  374 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtca 473  Q
    |||||||||||           |||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||    
T  21644022 acctcaatatg-----------gtttcgaaaagccactataatatggtacgcagaccactcgagaaaccaaagaaggaggaaaaaaagaacggttcatca 21643934  T
Q  474 acataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaattt 572  Q
    ||| |||||    |||||||| | | ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||| |||| ||||    
T  21643933 acacaaacc----gagggagatgggaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtctctattt 21643838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 167 - 585
Target Start/End: Original strand, 24884660 - 24885064
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  24884660 tgttgtttttgtaatttgaaa-ttacggcagagctttgaaactattaccggggtgagtcacgaccaggtagctttctttaagacgttttgcggcactacc 24884758  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggat-aaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcg 365  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  24884759 taagttgtgcaaggtagactagcaaccacgccgtctccaggataaaaacagcccagattatttctgtacgattaaaggctgcactgccagaaatcgctcg 24884858  T
Q  366 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacg 465  Q
    |||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  24884859 agaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaggaagaaaagaacg 24884947  T
Q  466 gttcgtcaacataaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagct 564  Q
    ||||||||||| |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||||||| | |||||||||||    
T  24884948 gttcgtcaacacaaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattctcggttttggagtgaagaattccattcccgagct 24885043  T
Q  565 ctcaatttataaggaggattt 585  Q
    ||| |||||||  ||||||||    
T  24885044 ctctatttatagagaggattt 24885064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 185 - 489
Target Start/End: Complemental strand, 17955919 - 17955626
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  17955919 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaaattgtgcaaggtaga 17955820  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17955819 ctagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 17955720  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgc 484  Q
               ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||| |||||||||| ||||||     
T  17955719 -----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacgattcgtcaacacaaaccga 17955631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 43999360 - 43998984
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  43999360 aaaattacgacagagctttgaaactattactgggttgagtcacgatcaggtcgttttctttaaaacgtttcgcggcactacctaaattgtgcaaggtaga 43999261  T
Q  285 ctagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 384  Q
    |||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  43999260 ctagcaactgcgccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcactaccaaaaatcgctcgagaataacacctcaatatg 43999161  T
Q  385 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgc 484  Q
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||      
T  43999160 -----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaacc-- 43999074  T
Q  485 gggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
      |||||||| ||| ||| ||||||| |||| ||||| ||||||||||||||||| |||| ||||||   | |||||||||||| |||||||    
T  43999073 --gagggagatgagaaggggagaaaatcagagaagaggattcgattctcagttttagagtaaagaatgtaaatcccgagctctctatttata 43998984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 174 - 455
Target Start/End: Complemental strand, 42514515 - 42514245
Alignment:
Q  174 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 273  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42514515 tttgtaatttgaaaattacgacagagctttaaaactattaccggggtgagtcatgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 42514416  T
Q  274 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  42514415 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccaggttcaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 42514316  T
Q  374 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 455  Q
    |||||||||||           ||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||    
T  42514315 acctcaatatg-----------gtttcgaaaaaccactctaatatagtacgcagaccactcgagaaaacaaagaaggaggaa 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 32010820 - 32011066
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32010820 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 32010916  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32010917 ccgagctctcaatttataaggaggatttctactagagtgtatgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 32011016  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32011017 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 32011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 32015994 - 32016240
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32015994 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 32016090  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32016091 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccat 32016190  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32016191 ccttgtgtttacattccaaaggctccacaaattcactagtatactccaag 32016240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 478 - 733
Target Start/End: Complemental strand, 2165650 - 2165394
Alignment:
Q  478 aaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataag 577  Q
    |||||||||||||||||||||| |||||||||| ||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2165650 aaaccgcgggagggagaagagatgagagaaaactagagaagagcatttgattctcaattttggagtgaagaatactattcccgagctctcaatttataag 2165551  T
Q  578 gaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatt-ccaa 676  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2165550 gaggatttctactagagtgtgtgatctacccgatgtgagacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattcccaa 2165451  T
Q  677 aggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    || |||||||||||||||||||||||||||        |||||||||||||||||||    
T  2165450 agactccacaaactcactagtatactccaaaattttttcattatacactagtgttcc 2165394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 167 - 386
Target Start/End: Original strand, 32015645 - 32015866
Alignment:
Q  167 tgttgtatttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||| |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  32015645 tgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgtggcacta 32015744  T
Q  265 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctc 364  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  32015745 cctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 32015844  T
Q  365 gagaataacacctcaatatggt 386  Q
    |||||| ||||||| |||||||    
T  32015845 gagaatgacacctcgatatggt 32015866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 301 - 575
Target Start/End: Complemental strand, 21643652 - 21643395
Alignment:
Q  301 ctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttc 400  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||           |    
T  21643652 ctccaggataaaacagcccagattctaactgtacgattaaaggttgcactgc---aaatcgctcgagaataacacctcaatatggttt-----------c 21643567  T
Q  401 gaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagag-a 499  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||| |    |||||||| ||| |    
T  21643566 gaaaagccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaatc----gagggagatgagaa 21643471  T
Q  500 ggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    || |||||||||| | ||||| ||||||||||| ||||||||||||||||| | ||||||||| |||| |||||||    
T  21643470 ggggagaaaaccaaagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtctctatttata 21643395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 43998693 - 43998546
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43998693 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatttcaaaggctccac 43998594  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    ||||  ||||||||||||||||       |||||||||||||||||||    
T  43998593 aaaccaactagtatactccaagtttttttcattatacactagtgttcc 43998546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 17955281 - 17955134
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17955281 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacacttcacactagtttctccatccttgtgtttacattccaaaggctccac 17955182  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    |||   |||||||||||| |||       |||||||||||||||||||    
T  17955181 aaaacaactagtatactctaagtcttttccattatacactagtgttcc 17955134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 586 - 707
Target Start/End: Original strand, 24885324 - 24885445
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  24885324 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 24885423  T
Q  686 aaactcactagtatactccaag 707  Q
    | |   ||||||||||||||||    
T  24885424 ataacaactagtatactccaag 24885445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 19430004 - 19430117
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19430004 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19430103  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  19430104 aaaacagcccagat 19430117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 19435506 - 19435619
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19435506 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19435605  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  19435606 aaaacagcccagat 19435619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 19566153 - 19566266
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19566153 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19566252  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  19566253 aaaacagcccagat 19566266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 19571655 - 19571768
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19571655 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19571754  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  19571755 aaaacagcccagat 19571768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 220 - 323
Target Start/End: Complemental strand, 33616822 - 33616719
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccc 319  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  33616822 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 33616723  T
Q  320 agat 323  Q
    ||||    
T  33616722 agat 33616719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 408 - 575
Target Start/End: Complemental strand, 21641684 - 21641520
Alignment:
Q  408 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagag-aggagaga 506  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    |||||||| ||| ||| ||||    
T  21641684 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacataaacc----gagggagatgagaaggggaga 21641589  T
Q  507 aaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||||| | ||||| |||||||||||  |||||||||||||||| | ||||||||| |||| |||||||    
T  21641588 aaaccaaagaagaggattcgattctcgattttggagtgaagaatcccattcccgaggtctctatttata 21641520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 408 - 575
Target Start/End: Complemental strand, 21642059 - 21641895
Alignment:
Q  408 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagag-aggagaga 506  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    |||||||| ||| ||| ||||    
T  21642059 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacataaacc----gagggagatgagaaggggaga 21641964  T
Q  507 aaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||||| | ||||| |||||||||||  |||||||||||||||| | ||||||||| |||| |||||||    
T  21641963 aaaccaaagaagaggattcgattctcgattttggagtgaagaatcccattcccgaggtctctatttata 21641895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 408 - 575
Target Start/End: Complemental strand, 21642434 - 21642270
Alignment:
Q  408 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagag-aggagaga 506  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    |||||||| ||| ||| ||||    
T  21642434 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacataaacc----gagggagatgagaaggggaga 21642339  T
Q  507 aaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||||| | ||||| |||||||||||  |||||||||||||||| | ||||||||| |||| |||||||    
T  21642338 aaaccaaagaagaggattcgattctcgattttggagtgaagaatcccattcccgaggtctctatttata 21642270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 408 - 575
Target Start/End: Complemental strand, 21643184 - 21643020
Alignment:
Q  408 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagag-aggagaga 506  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||    |||||||| ||| ||| ||||    
T  21643184 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaacc----gagggagatgagaaggggaga 21643089  T
Q  507 aaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||||| | ||||| ||||||||||| ||||||||||||||||| | ||||||||| |||| |||||||    
T  21643088 aaaccaaagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtctctatttata 21643020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 42513995 - 42513848
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||    
T  42513995 ctactagagtgtgtgatctatccaatgtgggacataaaattttcaattcacactttacactattttctacatccttgtgtttacattccaatgtctccac 42513896  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  42513895 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 42513848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 408 - 575
Target Start/End: Complemental strand, 21642809 - 21642645
Alignment:
Q  408 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacataaaccgcgggagggagaagag-aggagaga 506  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||    |||||||| ||| ||| ||||    
T  21642809 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacacaaacc----gagggagatgagaaggggaga 21642714  T
Q  507 aaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    |||||| | ||||| |||||||||||  |||||||||||||||| | ||||||||| |||| |||||||    
T  21642713 aaaccaaagaagaggattcgattctcgattttggagtgaagaatcccattcccgaggtctctatttata 21642645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 31030518 - 31030631
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||| ||||||| || || |||||||||||||| ||||| |||||||||||||||    
T  31030518 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactacccaaattatgcaaggtagactaacaaccacgccgtctccaggat 31030617  T
Q  310 aaaacagcccagat 323  Q
    ||||||||||||||    
T  31030618 aaaacagcccagat 31030631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 33 - 159
Target Start/End: Complemental strand, 20519890 - 20519763
Alignment:
Q  33 aaaaccacacctcggttttcgcttttcctcaaatccaac-actattcatcacgatgtagatccaaatggtggtggtgcgacgaggcgcagcctccgcatc 131  Q
    ||||||||||| | |||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  20519890 aaaaccacaccaccgtttcccctttccctcaaatccaaccactattcatcacaatgtagatccaaatggtggtggtgcgacgaggcgcggcctccgcatc 20519791  T
Q  132 acctcatctccggcgtccctcatcctat 159  Q
    |||| | |||||| || |||||||||||    
T  20519790 accttacctccggtgttcctcatcctat 20519763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 33 - 159
Target Start/End: Original strand, 38148632 - 38148759
Alignment:
Q  33 aaaaccacacctcggttttcgcttttcctcaaatccaacact-attcatcacgatgtagatccaaatggtggtggtgcgacgaggcgcagcctccgcatc 131  Q
    |||||||||||   |||| | ||||||||||||||||||  | ||| |||||||||||||||||||||| |||||||||| |||| || |||||||||||    
T  38148632 aaaaccacaccatcgtttccccttttcctcaaatccaaccgttattaatcacgatgtagatccaaatggcggtggtgcgatgaggtgcggcctccgcatc 38148731  T
Q  132 acctcatctccggcgtccctcatcctat 159  Q
    |||||| |||||||||||||||||||||    
T  38148732 acctcacctccggcgtccctcatcctat 38148759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 586 - 676
Target Start/End: Complemental strand, 21641273 - 21641184
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 676  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  21641273 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactag-atctacatccttgtatttacattccaa 21641184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 167 - 277
Target Start/End: Original strand, 32010483 - 32010595
Alignment:
Q  167 tgttgtatttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||| |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||||    
T  32010483 tgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctttttaagacatttcgcggcacta 32010582  T
Q  265 cctaagttgtgca 277  Q
    ||| | |||||||    
T  32010583 cctgaattgtgca 32010595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 13584340 - 13584454
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta--------cctaagttgtgcaaggtagactagcaaccgcgccgtc 301  Q
    |||||| || ||| |||||||||||||||| ||||||||||||||||||||||||        || |||||||||||||||||||| ||||| |||||||    
T  13584340 attaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttcccaagttgtgcaaggtagactaacaaccacgccgtc 13584439  T
Q  302 tccaggataaaacag 316  Q
    |||||||||||||||    
T  13584440 tccaggataaaacag 13584454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 31449962 - 31449866
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  31449962 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 31449866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 38182333 - 38182237
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| ||||||| |||||||| |||||| || ||| |||||||||| ||| || ||||| ||||| |||||||||||||||    
T  38182333 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaaccacgccgcctccaggataaaaca 38182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 44926019 - 44925923
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  44926019 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 44925923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 21645620 - 21645574
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21645620 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 21645574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 32014255 - 32014301
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32014255 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 32014301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 15875764 - 15875668
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  15875764 tgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 15875668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 19166633 - 19166729
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||  || || ||||||| || |||||| ||||| ||||| |||||||||||||||    
T  19166633 tgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaaccacgccgcctccaggataaaaca 19166729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 40125981 - 40125885
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  40125981 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 40125885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 32010605 - 32010659
Alignment:
Q  332 tacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggt 386  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||    
T  32010605 tacgattaaaggctacactgccagaaatcgctcgagaatgacacctcgatatggt 32010659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 17025934 - 17026030
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||  |||||||||  |||||| ||| | || || |||||||||||||||    
T  17025934 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaaca 17026030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 17556426 - 17556522
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || ||  |||||||||  |||||| ||| | || || |||||||||||||||    
T  17556426 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaaca 17556522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 18876462 - 18876367
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| | |||||||||||||| |||||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  18876462 tgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 18876367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 24090626 - 24090722
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || ||||||||||||| ||| || ||| | || || ||||| |||||||||    
T  24090626 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatcacgtcgcctccaagataaaaca 24090722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 33416546 - 33416642
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||| | |||||||||||||||| ||||||  || || |||||||||  |||||| ||||| ||||| ||||| |||||||||    
T  33416546 tgagtcacgaccaggtcggtctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaaca 33416642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 567
Target Start/End: Complemental strand, 42514245 - 42514182
Alignment:
Q  504 agaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctc 567  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||   ||||||||||||||    
T  42514245 agaaaaccagagaagaggattcgattctcggttttggagtgaagaatctcattcccgagctctc 42514182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 1807471 - 1807565
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 313  Q
    ||||||||||| |||||||| |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||||| ||| |||||||||    
T  1807471 tgagtcacgactaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaggataaaa 1807565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 2965627 - 2965725
Alignment:
Q  218 ggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||| ||| || |||||||||  | |||| ||||| | ||| ||| |||||||||||    
T  2965627 ggtgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctctaggataaaaca 2965725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 321
Target Start/End: Original strand, 37771711 - 37771812
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcc 318  Q
    |||||||||||||||||||||||||||||||   || |||||||| || || ||||| ||||||||||| |||||| |  | ||||||||||||||| ||    
T  37771711 tgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgaaaggtagactaacaaccgtg-tgcctccaggataaaacaacc 37771809  T
Q  319 cag 321  Q
    |||    
T  37771810 cag 37771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 43302815 - 43302718
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag--ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||| |||||| ||||| | |||||||||||||||| ||||||  | ||   ||||||||||||||||| ||||| ||||| |||||||||||||||    
T  43302815 tgagttacgacccggtcgttctctttaagacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccaggataaaaca 43302718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 17953969 - 17953873
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||  || || |||||||||  ||| || ||||| ||||| ||||| |||||||||    
T  17953969 tgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccacgccgcctccaagataaaaca 17953873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 34118465 - 34118561
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||  ||||||  || || |||||||||| |||||| ||||| || || ||  |||||||||||    
T  34118465 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcctttaggataaaaca 34118561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 36683578 - 36683674
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||| ||| |||||||| |||||||||||||||| ||||||  || || ||||| |||| |||||| ||||| ||| | |||||||||||||||    
T  36683578 tgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaaccacgctgcctccaggataaaaca 36683674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 40130782 - 40130739
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 263  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  40130782 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcact 40130739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 1911063 - 1910969
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| ||||||||| |||||||||||||||| |||||||  | || |||||||| | |||||| ||||| ||| | |||||| ||||||||    
T  1911063 agtcacgatcaggtcgctctctttaagacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaaccacgctgcctccagtataaaaca 1910969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 28559750 - 28559656
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 313  Q
    ||||||||||| | |||||| ||| |||||||||||| ||||||  || || |||||||||| | |||| ||||| |||||||| ||||||||||    
T  28559750 tgagtcacgacaatgtcgctctctataagacgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccgtctgcaggataaaa 28559656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 34818794 - 34818726
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagacta 287  Q
    |||||||||||||||||||||||||||||||   || || ||||| || || |||||||||||||||||    
T  34818794 tgagtcacgaccaggtcgctttctttaagacaaatcacgacactacccgaaattgtgcaaggtagacta 34818726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 25368093 - 25367991
Alignment:
Q  215 cggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 313  Q
    |||| ||||||||||||||||| |||| ||||||||   || || ||||| || || ||||||||||||||||| |||||| |  | |||||||||||||    
T  25368093 cgggttgagtcacgaccaggtcactttttttaagacaaatcacgacactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggataaaa 25367995  T
Q  314 cagc 317  Q
    ||||    
T  25367994 cagc 25367991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 4238411 - 4238337
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaacc 293  Q
    |||||||||||||||||||| ||||||| |||||||  ||||||  || || |||||||||| |||||| |||||    
T  4238411 tgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 4243150 - 4243076
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaacc 293  Q
    |||||||||||||||||||| ||||||| |||||||  ||||||  || || |||||||||| |||||| |||||    
T  4243150 tgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4243076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 9518434 - 9518476
Alignment:
Q  98 tggtggtggtgcgacgaggcgc-agcctccgcatcacctcatc 139  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  9518434 tggtggtggtgcgacgaggcgcaaccctccgcatcacctcatc 9518476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 15951617 - 15951584
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtt 253  Q
    |||||||||||||||||||| |||||||||||||    
T  15951617 tgagtcacgaccaggtcgctctctttaagacgtt 15951584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 230; Significance: 1e-126; HSPs: 5)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 180 - 575
Target Start/End: Complemental strand, 13877 - 13493
Alignment:
Q  180 atttgaaaattacgacagagcttt--gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 277  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13877 atttaaaaattacgacagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgca 13778  T
Q  278 aggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13777 aggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacct 13678  T
Q  378 caatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggaggaaagaaagaacggttcgtcaaca 476  Q
    || ||||           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||  |||||| ||||||||||||    
T  13677 cagtatg-----------gtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagaggggaggaagaaaagaatggttcgtcaaca 13589  T
Q  477 taaaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
     |||||    |||||||| ||| ||| |||||||||||| ||||| ||||||||||  ||||||||||||||||| | |||||||||||||| |||||||    
T  13588 caaacc----gagggagatgagaaggggagaaaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagctctctatttata 13493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 185 - 575
Target Start/End: Complemental strand, 19328 - 18946
Alignment:
Q  185 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 284  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19328 aaaattacgacagagcttcgaaaatattactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtaga 19229  T
Q  285 ctagcaacc---gcgccgtctccaggataaaacagcccagatgc--caactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc- 378  Q
    |||||||||   |||||||||||||||||||||||||||||| |   ||||||||||||||||| | ||||||||||||||||||||||||||||||||     
T  19228 ctagcaaccgcggcgccgtctccaggataaaacagcccagattctaaaactgtacgattaaaggtttcactgccagaaatcgctcgagaataacacctca 19129  T
Q  379 aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacata 478  Q
    ||||||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||   ||||||||||||||||||| |    
T  19128 aatatg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggaggaggaaaagaacggttcgtcaacaca 19040  T
Q  479 aaccgcgggagggagaagag-aggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttata 575  Q
    ||||    |||||||| ||| ||| |||||||||||| ||||||||||||||||| |||||||||| |||||||| | ||| |||||||| |||||||    
T  19039 aacc----gagggagatgagaaggggagaaaaccagagaagagtattcgattctcggttttggagtaaagaataccaatcctgagctctctatttata 18946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 586 - 733
Target Start/End: Complemental strand, 13133 - 12986
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 685  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  13133 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 13034  T
Q  686 aaactcactagtatactccaagnnnnnnncattatacactagtgttcc 733  Q
    | |   ||||||||||||||||       || ||||||||||||||||    
T  13033 ataacaactagtatactccaagtttttgccaatatacactagtgttcc 12986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 586 - 676
Target Start/End: Complemental strand, 18590 - 18500
Alignment:
Q  586 ctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaa 676  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  18590 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttatactagtttctacatcattgtgtttacattccaa 18500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Complemental strand, 15279 - 15233
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15279 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 15233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 203; Significance: 1e-110; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 31839 - 32085
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31839 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagataagagtattcgattctcagttttggtgtgaagaatactattc 31935  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31936 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 32035  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32036 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 32085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 167 - 386
Target Start/End: Original strand, 31492 - 31711
Alignment:
Q  167 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31492 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 31591  T
Q  267 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcga 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  31592 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 31691  T
Q  367 gaataacacctcaatatggt 386  Q
    |||| ||||||| |||||||    
T  31692 gaatgacacctcgatatggt 31711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 26667 - 26913
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26667 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagataagagtattcgattctcagttttggtgtgaagaatactattc 26763  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26764 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 26863  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26864 ccttttgtttacattccaaaggctccacaaactcactagtatactccaag 26913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 26325 - 26539
Alignment:
Q  174 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 271  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||| ||||| |||| || |||||| ||||||||||||||||||||||||||| | |    
T  26325 tttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagttacgatcaagtcgctctctttaagacgtttcgcggcactacctgaat 26424  T
Q  272 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||| |||||||||     
T  26425 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccatattcttactgtacgattaaaggctgcactgccagaaatctctcgagaatg 26524  T
Q  372 acacctcaatatggt 386  Q
    ||||||| |||||||    
T  26525 acacctcgatatggt 26539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 30102 - 30148
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30102 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 30148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 458 - 707
Target Start/End: Original strand, 3318 - 3564
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3318 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 3414  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3415 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctaccggatgtgggacataaaattttcaattcacactttacactagtttctccat 3514  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3515 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 3564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 167 - 386
Target Start/End: Original strand, 3003 - 3224
Alignment:
Q  167 tgttgtatttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||| |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  3003 tgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcacta 3102  T
Q  265 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctc 364  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  3103 cctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 3202  T
Q  365 gagaataacacctcaatatggt 386  Q
    |||||| ||||||| |||||||    
T  3203 gagaatgacacctcgatatggt 3224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 458 - 707
Target Start/End: Complemental strand, 81217 - 80971
Alignment:
Q  458 aaagaacggttcgtcaacataaaccgcgggagggagaagagaggagagaaaaccagataagagtattcgattctcagttttggagtgaagaatactattc 557  Q
    |||||||| |||||||||| ||| ||||||||  |  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  81217 aaagaacgattcgtcaacacaaatcgcgggag--atgaga-aggggagaaaaccagagaagagtattcgattctcagttttggagtgaagaatactattc 81121  T
Q  558 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccat 657  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  81120 ccgagctctcaatttataaggaggatttctactagagtgtgtgatctaccggatgtgggacataaaattttcaattcacactttacactagtttctccat 81021  T
Q  658 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  81020 ccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 80971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 167 - 386
Target Start/End: Complemental strand, 81532 - 81311
Alignment:
Q  167 tgttgtatttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 264  Q
    |||||| |||||||||||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  81532 tgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcacta 81433  T
Q  265 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatgccaactgtacgattaaaggctgcactgccagaaatcgctc 364  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  81432 cctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 81333  T
Q  365 gagaataacacctcaatatggt 386  Q
    |||||| ||||||| |||||||    
T  81332 gagaatgacacctcgatatggt 81311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 1e-40; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 222 - 323
Target Start/End: Original strand, 1567 - 1668
Alignment:
Q  222 agtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccag 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1567 agtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccag 1666  T
Q  322 at 323  Q
    ||    
T  1667 at 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 7036 - 7149
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    |||| |||| ||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  7036 attatcgggttgagttacgaccaggtcgttctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 7135  T
Q  310 aaaacagcccagat 323  Q
    |||||||| |||||    
T  7136 aaaacagctcagat 7149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 2877 - 2765
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| | ||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  2877 attaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 2778  T
Q  310 aaaacagcccaga 322  Q
    |||||||||||||    
T  2777 aaaacagcccaga 2765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 10837 - 10725
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 309  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| | ||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  10837 attaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 10738  T
Q  310 aaaacagcccaga 322  Q
    |||||||||||||    
T  10737 aaaacagcccaga 10725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 34074 - 33968
Alignment:
Q  210 attaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagga 308  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||| || ||||||| ||  || |||||    
T  34074 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccaaagtttgtacaaggtagaataacaaccgctcctccttcagga 33975  T
Q  309 taaaaca 315  Q
    |||||||    
T  33974 taaaaca 33968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 7103 - 7199
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  7103 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 7199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 9983 - 9887
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  9983 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 4073 - 4169
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  4073 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 4169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 783
Target Start/End: Original strand, 15542 - 15588
Alignment:
Q  737 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15542 catcagtggcgtaccctttcccaacaaaaataccattcttagtgatg 15588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 45776 - 45885
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||| ||||||||||||||||||| ||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  45776 taccgggttgagtcacaaccaggtcgctttctttaaaacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 45874  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  45875 aaacagcccag 45885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 220 - 321
Target Start/End: Complemental strand, 1321 - 1220
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcc 318  Q
    |||||||||||||||||||||||||||||||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||| ||||||||||||    
T  1321 tgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaagataaaacagcc 1223  T
Q  319 cag 321  Q
    |||    
T  1222 cag 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 153011 - 152902
Alignment:
Q  212 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 310  Q
    ||||||| |||||||| ||||||||||||||||||| ||   || |||||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  153011 taccgggttgagtcacaaccaggtcgctttctttaaaacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 152913  T
Q  311 aaacagcccag 321  Q
    |||||||||||    
T  152912 aaacagcccag 152902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 83065 - 83161
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||||||||||||||| |||||||||||||||| | ||| | || || || ||||||| |||||| |||||  |||| |||||||||||||||    
T  83065 tgagtcacgaccaggtcgctctctttaagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccaggataaaaca 83161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 220 - 315
Target Start/End: Complemental strand, 166182 - 166086
Alignment:
Q  220 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc-taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    |||||||| ||||||||||| |||||||||||||||| |||||| ||  || |||||||||  | |||| ||||| ||||| |||||||||||||||    
T  166182 tgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataaaaca 166086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 35639 - 35729
Alignment:
Q  226 acgaccaggtcgctttctttaagacgtttcgcggcacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 315  Q
    ||||||| | |||| |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  35639 acgaccatgccgctctctttaagacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 35729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 171798 - 171711
Alignment:
Q  232 aggtcgctttctttaagacgtttcgcggcactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccca 320  Q
    |||||||| |||||||||||||||| |||||| ||| || |||||||| | |||||| ||||| || |||| | ||||||||||||||||    
T  171798 aggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaa-gcagactatcaaccacgacgtc-ctaggataaaacagccca 171711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University