View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20003_low_29 (Length: 396)

Name: NF20003_low_29
Description: NF20003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20003_low_29
NF20003_low_29
[»] chr3 (4 HSPs)
chr3 (18-373)||(10703744-10704089)
chr3 (48-154)||(52750189-52750298)
chr3 (48-105)||(32471638-32471695)
chr3 (52-156)||(15800179-15800283)
[»] chr4 (6 HSPs)
chr4 (58-270)||(47442282-47442491)
chr4 (48-130)||(5912660-5912742)
chr4 (52-122)||(3469224-3469293)
chr4 (55-128)||(7048627-7048698)
chr4 (82-134)||(19420272-19420323)
chr4 (227-263)||(43804432-43804468)
[»] chr6 (4 HSPs)
chr6 (48-105)||(32847507-32847564)
chr6 (50-129)||(779718-779795)
chr6 (79-131)||(4433097-4433149)
chr6 (57-105)||(12229441-12229489)
[»] chr5 (5 HSPs)
chr5 (48-132)||(29161132-29161216)
chr5 (53-129)||(37326263-37326339)
chr5 (91-134)||(32117750-32117793)
chr5 (213-263)||(12460291-12460341)
chr5 (28-132)||(5270569-5270672)
[»] chr2 (2 HSPs)
chr2 (52-156)||(10931572-10931676)
chr2 (227-263)||(10582346-10582382)
[»] chr8 (5 HSPs)
chr8 (48-129)||(30035520-30035601)
chr8 (48-129)||(30051665-30051746)
chr8 (57-105)||(11443398-11443446)
chr8 (28-132)||(30284400-30284503)
chr8 (24-132)||(35578295-35578402)
[»] chr1 (2 HSPs)
chr1 (222-263)||(49520012-49520053)
chr1 (48-132)||(6349489-6349573)
[»] chr7 (4 HSPs)
chr7 (51-123)||(8688358-8688430)
chr7 (50-129)||(18026873-18026952)
chr7 (54-156)||(20553865-20553967)
chr7 (48-96)||(38905244-38905292)


Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 373
Target Start/End: Original strand, 10703744 - 10704089
Alignment:
Q  18 atgacatttaaagtaaaaacaagttacataaacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaact 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||  |||||||||||||||||| |||| ||| |    
T  10703744 atgacatttaaagtaaaaacaagttacataaacaaaattataagctattatatgatctacaaacctcaa--ttattcaagattcaagtgctgaaccaaat 10703841  T
Q  118 gacaaaagaaaagtgtccgagtatacaaaattgacaaaacacgtacctgactaagttttaatagtgattcattagaattagtcggtattcctcagtgaac 217  Q
    |||| |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10703842 gacacaagaaaagtgtctgaatatacaaaattgacaaaacatgtacctgactaagttttaatagtgattcattagaattagtcggtattcctcagtgaac 10703941  T
Q  218 cagaattcgagatgatattcatgttcaaaatagatacacactagagttttctcgctccttagagtatagtaaaatgttgtaggaagttctgtagtcaatc 317  Q
    |||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10703942 cagaattcgagatga--------ttcaaaatagatacacactagagttttctcgctccctagagtatagtaaaatgttgtaggaagttctgcagtcaatc 10704033  T
Q  318 ctggctttggcttctattatgttgaatcttgtgcctgtgtttggtttctatgctta 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10704034 ctggctttggcttctattatgttgaatcttgtgcctgtgtttggtttctatgctta 10704089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 52750298 - 52750189
Alignment:
Q  48 aacaaaattataagct---aatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtgtccgagtataca 144  Q
    ||||||||||||||||   |||||||||| ||| ||||||||| | ||||||||||||||| |   ||||| ||||||||||||||||   |  ||||||    
T  52750298 aacaaaattataagcttataatatatcatatatgaacctcaaactaattcaagattcaagttaaatatcaaatgacaaaagaaaagtggttggttataca 52750199  T
Q  145 aaattgacaa 154  Q
    ||||||||||    
T  52750198 aaattgacaa 52750189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 32471695 - 32471638
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagt 105  Q
    |||||||||||||| | ||||| ||| ||| || |||||||| |||||||||||||||    
T  32471695 aacaaaattataagttgatatagcatatatgaatctcaaaataattcaagattcaagt 32471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 15800283 - 15800179
Alignment:
Q  52 aaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtgtccgagtatacaaaattga 151  Q
    ||||||||| ||||||||||||  || ||| ||||||| | | || ||| | || || |||||| ||| ||||||||| || ||||||||| ||| ||||    
T  15800283 aaattataaactaatatatcataaatgaacatcaaaataagttaaaattaatgttataaatcaaatgagaaaagaaaattggccgagtataaaaagttga 15800184  T
Q  152 caaaa 156  Q
    |||||    
T  15800183 caaaa 15800179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 270
Target Start/End: Original strand, 47442282 - 47442491
Alignment:
Q  58 taagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtgtccgagtatacaaaattgacaaaac 157  Q
    |||||| | |||||||||| ||| |||||||| ||||||||||||||| || |||||| |||||||||||| ||||| |  |||||||||||| |||||     
T  47442282 taagcttacatatcatctacaaagctcaaaataattcaagattcaagtaataaatcaaatgacaaaagaaatgtgtctggctatacaaaattggcaaaa- 47442380  T
Q  158 acgtacctgactaagttttaatagtgattcattagaattagtcggtattcctc--agtgaaccagaattcgagatgatattcatgttcaaaatagataca 255  Q
    |  | ||   |||||||||||||||||||||||||| ||| |||| |||| ||  || |||||    ||| |||||  ||||||||||||||||||||||    
T  47442381 aaattccactctaagttttaatagtgattcattagatttaatcgggattcgtcagagggaacc--gtttcaagatg--attcatgttcaaaatagataca 47442476  T
Q  256 cactagagttttctc 270  Q
     ||||||||||||||    
T  47442477 tactagagttttctc 47442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 5912742 - 5912660
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaag 130  Q
    |||||||||||||| | |||||| || ||| ||||||||||| ||||||||||||| | ||  ||||| ||||||||||||||    
T  5912742 aacaaaattataagatgatatattatatatgaacctcaaaataattcaagattcaaattatatatcaaatgacaaaagaaaag 5912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 3469293 - 3469224
Alignment:
Q  52 aaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaa 122  Q
    |||||||||||||||||||||||||  ||||| | ||| ||||||||||||||| || |||||| ||||||    
T  3469293 aaattataagctaatatatcatctactaacct-agaataattcaagattcaagtaataaatcaaatgacaa 3469224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 7048698 - 7048627
Alignment:
Q  55 ttataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaa 128  Q
    |||||| | |||||||||||||  ||||||||||| |||||||||| |||| |  |||||| ||||||||||||    
T  7048698 ttataacccaatatatcatctactaacctcaaaataattcaagatttaagtca--aatcaaatgacaaaagaaa 7048627  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 19420323 - 19420272
Alignment:
Q  82 ctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtgtc 134  Q
    ||||||||||| |||||||||||| || ||| || ||||||||||||||||||    
T  19420323 ctcaaaattat-caagattcaagtcataaatgaaatgacaaaagaaaagtgtc 19420272  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 43804468 - 43804432
Alignment:
Q  227 agatgatattcatgttcaaaatagatacacactagag 263  Q
    |||||| |||||||||||||||||||||| |||||||    
T  43804468 agatgagattcatgttcaaaatagatacaaactagag 43804432  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 32847507 - 32847564
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagt 105  Q
    |||||||||||||||| ||||||||| ||| | ||||||||| |||||||||||||||    
T  32847507 aacaaaattataagctgatatatcatatatgagcctcaaaataattcaagattcaagt 32847564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 779795 - 779718
Alignment:
Q  50 caaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaa 129  Q
    |||| ||||||||||||||||||| || |||||||  ||| ||||| ||||||||| |||||||||  ||||| ||||||    
T  779795 caaacttataagctaatatatcatataaaaacctc--aataattcacgattcaagtcatgaatcaaacgacaatagaaaa 779718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 4433097 - 4433149
Alignment:
Q  79 aacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagt 131  Q
    ||||||||||| ||||||||||||||| || |||||| | ||||| |||||||    
T  4433097 aacctcaaaataattcaagattcaagtcataaatcaaatcacaaacgaaaagt 4433149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 12229441 - 12229489
Alignment:
Q  57 ataagctaatatatcatctataaacctcaaaattattcaagattcaagt 105  Q
    |||||||||| ||||||||||  |||| ||||| |||||||||||||||    
T  12229441 ataagctaatgtatcatctatttacctaaaaataattcaagattcaagt 12229489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 29161216 - 29161132
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtg 132  Q
    |||||||||| ||||| ||||||||| ||| ||||||||||| ||||||| |||| || ||   |||| ||||||||||||||||    
T  29161216 aacaaaattaaaagctgatatatcatatatgaacctcaaaataattcaaggttcatgtcatatgtcaaatgacaaaagaaaagtg 29161132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 37326339 - 37326263
Alignment:
Q  53 aattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaa 129  Q
    ||||| ||||||||||||||| ||  ||| ||||||| ||||||||||||| | || |||||| |||||||||||||    
T  37326339 aattaaaagctaatatatcatatacgaacatcaaaatgattcaagattcaaatcataaatcaaatgacaaaagaaaa 37326263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 32117793 - 32117750
Alignment:
Q  91 attcaagattcaagtgatgaatcaactgacaaaagaaaagtgtc 134  Q
    ||||||||||||||| || |||||| ||||||||||||||||||    
T  32117793 attcaagattcaagtcataaatcaaatgacaaaagaaaagtgtc 32117750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 12460291 - 12460341
Alignment:
Q  213 tgaaccagaattcgagatgatattcatgttcaaaatagatacacactagag 263  Q
    |||| ||| |||| |||||| |||||||||||||||||||||||| |||||    
T  12460291 tgaatcaggattcaagatgaaattcatgttcaaaatagatacacaatagag 12460341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 5270672 - 5270569
Alignment:
Q  28 aagtaaaaacaagttacataaacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaa 127  Q
    |||||||||||||| |||| | || ||||||||| |  |||||||| ||| ||| ||| ||| ||||||| ||||||| || |||||| ||| |||||||    
T  5270672 aagtaaaaacaagtgacat-agcagaattataagttggtatatcatatatgaacttcagaataattcaaggttcaagtcataaatcaaatgagaaaagaa 5270574  T
Q  128 aagtg 132  Q
     ||||    
T  5270573 tagtg 5270569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 10931572 - 10931676
Alignment:
Q  52 aaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtgtccgagtatacaaaattga 151  Q
    ||||||||||| | ||||||||||     ||||||||| |||||||||||||||  | |||||| ||||||||||||||| |  |  |||||||||||||    
T  10931572 aaattataagccagtatatcatcttagtgcctcaaaataattcaagattcaagtactaaatcaagtgacaaaagaaaagtatttggctatacaaaattga 10931671  T
Q  152 caaaa 156  Q
    |||||    
T  10931672 caaaa 10931676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 10582346 - 10582382
Alignment:
Q  227 agatgatattcatgttcaaaatagatacacactagag 263  Q
    |||||| ||||||||||||||||||||||||||||||    
T  10582346 agatgagattcatgttcaaaatagatacacactagag 10582382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 30035601 - 30035520
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaa 129  Q
    |||||||||||||||| ||||||  | ||| ||||| ||||| ||| ||||||||||| ||  ||||| |||||||||||||    
T  30035601 aacaaaattataagctgatatatattatattaaccttaaaataattaaagattcaagtcatatatcaaatgacaaaagaaaa 30035520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 30051746 - 30051665
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaa 129  Q
    ||||||||||| || | ||||||||| ||| || |||||||| ||||||||||||||| ||  ||||| ||| |||||||||    
T  30051746 aacaaaattattagttgatatatcatatatgaatctcaaaataattcaagattcaagttatatatcaaatgataaaagaaaa 30051665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 11443446 - 11443398
Alignment:
Q  57 ataagctaatatatcatctataaacctcaaaattattcaagattcaagt 105  Q
    ||||||| ||||||||| ||| ||| ||||||| |||||||||||||||    
T  11443446 ataagctgatatatcatatatgaacttcaaaataattcaagattcaagt 11443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 30284400 - 30284503
Alignment:
Q  28 aagtaaaaacaagttacataaacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaa 127  Q
    |||||||||||||| |||| |||||| ||| ||  | ||||||||| ||| ||| ||||||| || ||||| |||||| ||  ||||| |||||||| ||    
T  30284400 aagtaaaaacaagtgacat-aacaaatttacaaattgatatatcatatatgaacatcaaaataatgcaagaatcaagtcatatatcaaatgacaaaataa 30284498  T
Q  128 aagtg 132  Q
    |||||    
T  30284499 aagtg 30284503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 35578295 - 35578402
Alignment:
Q  24 tttaaagtaaaaacaagttacataaacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaa 123  Q
    ||||||||||||||| || |||||| |||||||||||| | |||||||||  || |  |||||||  ||| || |||||||| || |||||| | ||| |    
T  35578295 tttaaagtaaaaacacgtgacataa-caaaattataagttgatatatcatacatgagtctcaaaacaatttaacattcaagtcataaatcaattcacata 35578393  T
Q  124 agaaaagtg 132  Q
    |||||||||    
T  35578394 agaaaagtg 35578402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 49520012 - 49520053
Alignment:
Q  222 attcgagatgatattcatgttcaaaatagatacacactagag 263  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  49520012 attcgagatgagattcatgtccaaaatagatacacactagag 49520053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 6349573 - 6349489
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtg 132  Q
    ||||||| |||||||  ||| ||||| ||| ||| ||||||| || || ||||||||| || |||||| ||| ||||||||||||    
T  6349573 aacaaaactataagccgatacatcatgtatgaacatcaaaataatacatgattcaagtcataaatcaaatgaaaaaagaaaagtg 6349489  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 8688430 - 8688358
Alignment:
Q  51 aaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaa 123  Q
    ||||||||||| |||||||||||  |||||| ||||||| ||| ||||||||||| |  |||||| |||||||    
T  8688430 aaaattataagataatatatcatacataaacttcaaaataatttaagattcaagtcaaaaatcaaatgacaaa 8688358  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 18026873 - 18026952
Alignment:
Q  50 caaaattataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaa 129  Q
    ||||||| ||||||  ||| |||||||  ||||||||| | ||||||||| |||||||| |||||  |||||||||||||    
T  18026873 caaaattgtaagctgctatttcatctactaacctcaaattaattcaagatgcaagtgataaatcagatgacaaaagaaaa 18026952  T

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Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 20553865 - 20553967
Alignment:
Q  54 attataagctaatatatcatctataaacctcaaaattattcaagattcaagtgatgaatcaactgacaaaagaaaagtgtccgagtatacaaaattgaca 153  Q
    |||||||| | ||||||||| |   ||||| ||||| ||| |||||| |||| || |||||| |||||||||||||||||| || || | ||| ||||||    
T  20553865 attataagttgatatatcatattcgaaccttaaaataattgaagatttaagtcataaatcaaatgacaaaagaaaagtgtctgactaaaaaaagttgaca 20553964  T
Q  154 aaa 156  Q
    |||    
T  20553965 aaa 20553967  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 38905244 - 38905292
Alignment:
Q  48 aacaaaattataagctaatatatcatctataaacctcaaaattattcaa 96  Q
    |||||||||||||||| |||| | || ||||||||||||||| ||||||    
T  38905244 aacaaaattataagctgatatttgatatataaacctcaaaataattcaa 38905292  T

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