View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20003_low_73 (Length: 248)
Name: NF20003_low_73
Description: NF20003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20003_low_73 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 2368309 - 2368078
Alignment:
| Q |
1 |
ccttcataaatatggaactcgtgtctatctcgtatatatacaagtactccataattgaattttgtggtgtctgcaagtatccaagtccacgagtataatt |
100 |
Q |
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| T |
2368309 |
ccttcataaatatggaacccgtgtctatctcgtatatatacaagtactccataattgaattttgtggtgtctgcaagtatccaagtccacgagtatgatt |
2368210 |
T |
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| Q |
101 |
atattattttgtaaaatcgattttgataaaattatttgtttcttcacacattaattgctattgccaaccaactaaataaataactaaaagatttattggt |
200 |
Q |
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| T |
2368209 |
aaattattttgtaaaatcgattttgataaaattatttgtttcttcatacattaattgctattgccaaccaactaaataaataactaaaagatttattggt |
2368110 |
T |
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| Q |
201 |
tcaaatatactaatagattcatactataaaaa |
232 |
Q |
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||||||||||||||||||| |||||||||||| |
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| T |
2368109 |
tcaaatatactaatagattgatactataaaaa |
2368078 |
T |
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