View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20005_low_1 (Length: 482)

Name: NF20005_low_1
Description: NF20005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20005_low_1
NF20005_low_1
[»] chr4 (14 HSPs)
chr4 (23-324)||(18731314-18731615)
chr4 (23-324)||(18723895-18724196)
chr4 (23-324)||(18699210-18699511)
chr4 (23-324)||(18679377-18679678)
chr4 (19-321)||(18655290-18655592)
chr4 (361-469)||(18723750-18723858)
chr4 (361-469)||(18731169-18731277)
chr4 (361-469)||(18655142-18655250)
chr4 (361-467)||(18699067-18699173)
chr4 (361-451)||(18679250-18679340)
chr4 (40-146)||(18073842-18073948)
chr4 (368-469)||(18074170-18074272)
chr4 (40-99)||(17989088-17989147)
chr4 (42-141)||(5090960-5091059)
[»] chr1 (6 HSPs)
chr1 (20-324)||(268167-268471)
chr1 (20-304)||(28164193-28164476)
chr1 (20-304)||(28127509-28127793)
chr1 (361-470)||(268020-268130)
chr1 (402-471)||(28164031-28164100)
chr1 (402-450)||(28127352-28127400)
[»] chr8 (1 HSPs)
chr8 (20-321)||(29273596-29273897)
[»] chr6 (83 HSPs)
chr6 (20-318)||(26646539-26646837)
chr6 (20-318)||(26752507-26752805)
chr6 (40-324)||(26656069-26656353)
chr6 (40-324)||(26762040-26762324)
chr6 (40-318)||(25579799-25580080)
chr6 (40-298)||(26056006-26056264)
chr6 (40-298)||(26075976-26076234)
chr6 (41-319)||(27337893-27338171)
chr6 (41-319)||(27398633-27398911)
chr6 (20-304)||(26823900-26824184)
chr6 (40-318)||(26142945-26143226)
chr6 (40-324)||(25538620-25538907)
chr6 (20-298)||(27718228-27718506)
chr6 (20-177)||(26623036-26623193)
chr6 (20-177)||(26729014-26729171)
chr6 (40-298)||(25481822-25482080)
chr6 (20-146)||(27679006-27679132)
chr6 (20-320)||(28781199-28781499)
chr6 (20-320)||(28786338-28786638)
chr6 (20-298)||(27592869-27593147)
chr6 (20-298)||(27610851-27611129)
chr6 (20-181)||(27724811-27724972)
chr6 (20-304)||(28792459-28792743)
chr6 (20-131)||(27677630-27677741)
chr6 (20-129)||(27706420-27706529)
chr6 (40-195)||(26048925-26049080)
chr6 (40-195)||(26070094-26070249)
chr6 (20-131)||(27698510-27698621)
chr6 (26-164)||(28139607-28139745)
chr6 (32-318)||(26884235-26884523)
chr6 (26-179)||(26937160-26937313)
chr6 (20-141)||(27604711-27604832)
chr6 (23-304)||(26861679-26861957)
chr6 (20-146)||(26802502-26802628)
chr6 (41-298)||(27214498-27214758)
chr6 (41-298)||(27234470-27234730)
chr6 (20-146)||(27531198-27531324)
chr6 (400-469)||(27604375-27604444)
chr6 (20-145)||(31284348-31284473)
chr6 (44-304)||(26949745-26950005)
chr6 (23-134)||(28242867-28242978)
chr6 (368-469)||(27427283-27427385)
chr6 (40-146)||(27427607-27427713)
chr6 (35-134)||(28150012-28150111)
chr6 (364-469)||(26802850-26802956)
chr6 (35-134)||(28181189-28181288)
chr6 (23-134)||(28227013-28227124)
chr6 (373-461)||(28781516-28781606)
chr6 (23-100)||(28297760-28297837)
chr6 (23-100)||(28514236-28514313)
chr6 (38-106)||(26341975-26342043)
chr6 (23-87)||(28234627-28234691)
chr6 (41-136)||(26848741-26848836)
chr6 (35-134)||(28185441-28185540)
chr6 (373-461)||(28786655-28786743)
chr6 (373-461)||(28792776-28792864)
chr6 (41-87)||(2184369-2184415)
chr6 (42-136)||(25071741-25071835)
chr6 (42-87)||(26975134-26975179)
chr6 (373-469)||(26646892-26646990)
chr6 (373-469)||(26752860-26752958)
chr6 (42-108)||(2184980-2185046)
chr6 (206-258)||(26617868-26617920)
chr6 (206-258)||(26723796-26723848)
chr6 (364-461)||(27592698-27592799)
chr6 (364-461)||(27679354-27679455)
chr6 (206-304)||(28297556-28297654)
chr6 (206-304)||(28514419-28514517)
chr6 (170-279)||(25506852-25506961)
chr6 (206-258)||(26811755-26811807)
chr6 (35-95)||(28325556-28325616)
chr6 (400-458)||(27706084-27706145)
chr6 (20-78)||(25506978-25507036)
chr6 (392-446)||(26824240-26824294)
chr6 (41-87)||(27665177-27665223)
chr6 (423-469)||(27698255-27698301)
chr6 (41-87)||(28098429-28098475)
chr6 (104-178)||(29826171-29826245)
chr6 (412-469)||(25483513-25483570)
chr6 (424-461)||(27677294-27677331)
chr6 (226-303)||(28325743-28325820)
chr6 (400-469)||(31284714-31284782)
chr6 (209-313)||(26959415-26959519)
[»] scaffold0277 (4 HSPs)
scaffold0277 (20-320)||(4498-4798)
scaffold0277 (20-320)||(13459-13759)
scaffold0277 (373-461)||(4391-4481)
scaffold0277 (373-461)||(13352-13442)
[»] scaffold0419 (2 HSPs)
scaffold0419 (20-320)||(7585-7885)
scaffold0419 (373-461)||(7902-7992)
[»] scaffold0349 (2 HSPs)
scaffold0349 (20-298)||(14205-14482)
scaffold0349 (20-146)||(3422-3549)
[»] scaffold0038 (5 HSPs)
scaffold0038 (23-134)||(43029-43140)
scaffold0038 (23-134)||(34788-34899)
scaffold0038 (23-134)||(27511-27622)
scaffold0038 (35-95)||(116871-116931)
scaffold0038 (226-303)||(117058-117135)
[»] scaffold0003 (2 HSPs)
scaffold0003 (40-146)||(59650-59756)
scaffold0003 (368-469)||(59978-60080)
[»] scaffold0019 (1 HSPs)
scaffold0019 (35-178)||(58251-58394)
[»] chr2 (3 HSPs)
chr2 (20-87)||(3279748-3279815)
chr2 (42-87)||(17993744-17993789)
chr2 (224-304)||(3279967-3280047)


Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 23 - 324
Target Start/End: Complemental strand, 18731615 - 18731314
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731615 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 18731516  T
Q  123 ctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18731515 ctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacaaaaagagtttccaaaataacaagaa 18731416  T
Q  223 aaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattct 322  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18731415 aaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattttagtcatgggtactcctctttacttaattct 18731316  T
Q  323 tg 324  Q
    ||    
T  18731315 tg 18731314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 23 - 324
Target Start/End: Complemental strand, 18724196 - 18723895
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724196 attcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 18724097  T
Q  123 ctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaa 222  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||    
T  18724096 ctgttttctatggcgtggatcctagtcacatacgacaccaaagtgggagttatggtgaacatctcactaagcacaaaatgagtttccaaaataacaagaa 18723997  T
Q  223 aaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattct 322  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18723996 aaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattct 18723897  T
Q  323 tg 324  Q
    ||    
T  18723896 tg 18723895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 23 - 324
Target Start/End: Complemental strand, 18699511 - 18699210
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||    
T  18699511 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgttttgc 18699412  T
Q  123 ctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaa 222  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18699411 ctgttttctatggcgtagatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaa 18699312  T
Q  223 aaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattct 322  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18699311 aaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattttagttctgggtactcctctttacttaattct 18699212  T
Q  323 tg 324  Q
    ||    
T  18699211 tg 18699210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 23 - 324
Target Start/End: Complemental strand, 18679678 - 18679377
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18679678 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtcttgttttgc 18679579  T
Q  123 ctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaa 222  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||    
T  18679578 ctgttttctatgtcgtggatcctactcacatatgacatcaaagtggtagttatggtgaacatctcactaatcactgaaagagtttccaaaataacaataa 18679479  T
Q  223 aaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattct 322  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18679478 aaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattct 18679379  T
Q  323 tg 324  Q
    ||    
T  18679378 tg 18679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 19 - 321
Target Start/End: Complemental strand, 18655592 - 18655290
Alignment:
Q  19 ctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgtt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||    
T  18655592 ctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgtt 18655493  T
Q  119 ttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataaca 218  Q
    || ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  18655492 tttcctgttttctatggcgtggatcctactcacatacgacatcaaactggaagttatggtgaacatctcactaagcacagaaagaatttccaaaataaca 18655393  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  18655392 agaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattctagtcctgggtactcctcttcacttaa 18655293  T
Q  319 ttc 321  Q
    |||    
T  18655292 ttc 18655290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 361 - 469
Target Start/End: Complemental strand, 18723858 - 18723750
Alignment:
Q  361 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 460  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18723858 cctcagtaataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18723759  T
Q  461 tgatatatt 469  Q
    |||||||||    
T  18723758 tgatatatt 18723750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 361 - 469
Target Start/End: Complemental strand, 18731277 - 18731169
Alignment:
Q  361 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 460  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731277 cctcaataataccatcttaaagcctaaattggaaacacctttttttttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18731178  T
Q  461 tgatatatt 469  Q
    |||||||||    
T  18731177 tgatatatt 18731169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 361 - 469
Target Start/End: Complemental strand, 18655250 - 18655142
Alignment:
Q  361 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 460  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18655250 cctcaatgataccatcttaaagcctaaattcgaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18655151  T
Q  461 tgatatatt 469  Q
    |||||||||    
T  18655150 tgatatatt 18655142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 361 - 467
Target Start/End: Complemental strand, 18699173 - 18699067
Alignment:
Q  361 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 460  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18699173 cctcaatgataccatcttaaagcctaaattggaaacacctttttaattacgtttttaaacaagtattagttatttataagtcaaaatagttagaaatgta 18699074  T
Q  461 tgatata 467  Q
    |||||||    
T  18699073 tgatata 18699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 361 - 451
Target Start/End: Complemental strand, 18679340 - 18679250
Alignment:
Q  361 cctcaataataccatcttaaagcctaaattggaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaatagtt 451  Q
    |||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18679340 cctcaataataccaaccgaaagcctaaattggaaacacctttttatttacgtttttaaacaagtattagttatttataagtcaaaatagtt 18679250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 18073842 - 18073948
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  18073842 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 18073941  T
Q  140 gatccta 146  Q
    || ||||    
T  18073942 gaaccta 18073948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 18074170 - 18074272
Alignment:
Q  368 aataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatat 466  Q
    ||||||||||||||||||||||  | ||||||||||| |||||  ||||||||||| | ||||||||||||| ||||||||||||| |||||||| ||||    
T  18074170 aataccatcttaaagcctaaatgtgtaacaccttttttatttatgtttttaaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatat 18074269  T
Q  467 att 469  Q
    |||    
T  18074270 att 18074272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 17989147 - 17989088
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaa 99  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  17989147 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaa 17989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 5091059 - 5090960
Alignment:
Q  42 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgga 141  Q
    ||||||| |||||||| |||||||| || ||||||||||| || || ||||||| ||||  ||| ||| | || ||||||||| |||||||||| |||||    
T  5091059 actatgcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtgga 5090960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 233; Significance: 1e-128; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 20 - 324
Target Start/End: Complemental strand, 268471 - 268167
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||    
T  268471 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaaaaagggtcgtctcattt 268372  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaa 219  Q
    |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  268371 tgcccgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaatagcaa 268272  T
Q  220 gaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaat 319  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||| |||||||||| ||||| |||||||| |||||||||||||    
T  268271 gaaaaacatggagcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccattctagtcgtgggtactgctctttacttaat 268172  T
Q  320 tcttg 324  Q
    |||||    
T  268171 tcttg 268167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 20 - 304
Target Start/End: Complemental strand, 28164476 - 28164193
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||    
T  28164476 tttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttt 28164377  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaa 219  Q
    |||||||||||| |||||||||||||| | |  | |||||||| |  |||||||||||  || |||| |||||||| ||  |||| ||||||||||||||    
T  28164376 tgcctgttttct-tggcgtggatcctactgatgtgcgacatcatacagggagttatggcaaagatcttactaagcatggtgagaggttccaaaataacaa 28164278  T
Q  220 gaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    ||||||||||||||| ||||| ||||||||| ||||||| ||  ||||||||||||||||||||||||||| |||||| ||||||    
T  28164277 gaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccattatagtccagggtac 28164193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 20 - 304
Target Start/End: Complemental strand, 28127793 - 28127509
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||    
T  28127793 tttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcctagttt 28127694  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaa 219  Q
    |||||||||||| |||||||||||||| | |  | ||| |||| |  ||||||||||||||| | ||  ||||||| ||| |||| ||||||||||||||    
T  28127693 tgcctgttttctttggcgtggatcctactgatgtgcgatatcatacagggagttatggtgaagagcttgctaagcatggagagaggttccaaaataacaa 28127594  T
Q  220 gaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    ||||||||||||||| ||||| ||||||||| ||||||| ||  ||||||||||||||||||||||||||| |||||| ||||||    
T  28127593 gaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccattatagtccagggtac 28127509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 470
Target Start/End: Complemental strand, 268130 - 268020
Alignment:
Q  361 cctcaataataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgt 459  Q
    |||| |||||||||||||||| | ||||| |  || |||||||| |||||| ||| |||| ||||||||||| |||||| | | ||||||||||||| ||    
T  268130 cctcgataataccatcttaaaccataaatggctaaaaccttttttatttacgtttctaaataagtattagttgtttatatgacgaaatagttagaaacgt 268031  T
Q  460 atgatatattt 470  Q
    || ||||||||    
T  268030 ataatatattt 268020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 28164100 - 28164031
Alignment:
Q  402 tttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatatttg 471  Q
    ||||||||  ||||||||||||||| || |||||||| |||||||||||||||  |||||||| ||||||    
T  28164100 tttatttatgtttttaaacaagtataagatatttatatgtcaaaatagttagagttgtatgatgtatttg 28164031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 28127400 - 28127352
Alignment:
Q  402 tttatttacatttttaaacaagtattagttatttataagtcaaaatagt 450  Q
    ||||||||  ||||||||||||||| || |||||||| |||||||||||    
T  28127400 tttatttatgtttttaaacaagtataaggtatttatatgtcaaaatagt 28127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 20 - 321
Target Start/End: Complemental strand, 29273897 - 29273596
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||    
T  29273897 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtctcattt 29273798  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaa 219  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||    
T  29273797 tgcctgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagtacgaagagagtttccaaaatagcaa 29273698  T
Q  220 gaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaat 319  Q
    |||||||||||| |||||||||||||||||||| ||||||||  ||||| |||||||||| |||||||||| ||||| |||||||| |||||||||||||    
T  29273697 gaaaaacatggatcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccattctagtcatgggtactgctctttacttaat 29273598  T
Q  320 tc 321  Q
    ||    
T  29273597 tc 29273596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 83)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 26646539 - 26646837
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  26646539 tttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgttt 26646638  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaa 219  Q
    |||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  26646639 tgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaa 26646738  T
Q  220 gaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    |||||||| ||| || ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||    
T  26646739 gaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggataccattatagtcctgggtaccccactttacttaa 26646837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 26752507 - 26752805
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  26752507 tttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgttt 26752606  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaa 219  Q
    |||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  26752607 tgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaa 26752706  T
Q  220 gaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    |||||||| ||| || ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||    
T  26752707 gaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggataccattatagtcctgggtaccccactttacttaa 26752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 40 - 324
Target Start/End: Original strand, 26656069 - 26656353
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||   |||||||||||||||||||| |||    
T  26656069 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtg 26656168  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    ||||||| ||||||||||||||| | ||| ||||| ||||| ||||| |||||||| | |||||  ||||||||||||||| |||||||| || |||||     
T  26656169 gatcctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttgg 26656268  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg 324  Q
    | ||||||||| | ||||||||  ||||||| |||||||| |||||||||| |||||  |||||| || |||||||||| |||||    
T  26656269 agcaatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactttacttaaatcttg 26656353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 40 - 324
Target Start/End: Original strand, 26762040 - 26762324
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||   |||||||||||||||||||| |||    
T  26762040 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtg 26762139  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    ||||||| ||||||||||||||| | ||| ||||| ||||| ||||| |||||||| | |||||  ||||||||||||||| |||||||| || |||||     
T  26762140 gatcctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttgg 26762239  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg 324  Q
    | ||||||||| | ||||||||  ||||||| |||||||| |||||||||| |||||  |||||| || |||||||||| |||||    
T  26762240 agcaatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactttacttaaatcttg 26762324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 40 - 318
Target Start/End: Original strand, 25579799 - 25580080
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||||||||  |||    
T  25579799 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtg 25579898  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    || |||| ||||||||||||||| |||||||||||||||||  |||| |||||||| | | |||| || ||||||||| |||||||||||||||| ||||    
T  25579899 gaacctactcacatacgacatcagagtgggagttatggtgagtatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgc 25579998  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcc---tgggtactcctctttacttaa 318  Q
     |||||||||| ||||||| ||  |||||||||||||||||||||| |||| ||||||   ||||||| || ||||||||||    
T  25579999 gtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaa 25580080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 40 - 298
Target Start/End: Original strand, 26056006 - 26056264
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |  | || ||||| ||||||||||  |||    
T  26056006 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtg 26056105  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    || |||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||   | || | |||||||||||| |||||||||||||||| ||||    
T  26056106 gaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgc 26056205  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
     |||||||||| | ||||| ||| |||||||||||||||||||||| |||| |||||||    
T  26056206 gtcaatggaagatggctcttactcaagctgctaacttgtccggctatcattatagtcct 26056264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 40 - 298
Target Start/End: Original strand, 26075976 - 26076234
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |  | || ||||| ||||||||||  |||    
T  26075976 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtg 26076075  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    || |||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||   | || | |||||||||||| |||||||||||||||| ||||    
T  26076076 gaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgc 26076175  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
     |||||||||| | ||||| ||| |||||||||||||||||||||| |||| |||||||    
T  26076176 gtcaatggaagatggctcttactcaagctgctaacttgtccggctatcattatagtcct 26076234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 41 - 319
Target Start/End: Complemental strand, 27338171 - 27337893
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 140  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||   |||||||||||||||||||| | ||    
T  27338171 aactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcgg 27338072  T
Q  141 atcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgca 240  Q
    |||||| |||| |||||||||| | ||||||||||||||| ||||| |||||||| | | | |  ||||||||||||||| ||||||||||| ||||| |    
T  27338071 atcctactcacgtacgacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaa 27337972  T
Q  241 tcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaat 319  Q
      |||||||| | ||||| ||  ||||||||||||| |||||| ||||||||||||  |||||| || |||||||||||    
T  27337971 gaaatggaagatggctcttacccaagctgctaacttctccggccaccattttagtcaagggtaccccactttacttaat 27337893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 41 - 319
Target Start/End: Complemental strand, 27398911 - 27398633
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 140  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||   |||||||||||||||||||| | ||    
T  27398911 aactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcgg 27398812  T
Q  141 atcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgca 240  Q
    |||||| |||| |||||||||| | ||||||||||||||| ||||| |||||||| | | | |  ||||||||||||||| ||||||||||| ||||| |    
T  27398811 atcctactcacgtacgacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaa 27398712  T
Q  241 tcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaat 319  Q
      |||||||| | ||||| ||  ||||||||||||| |||||| ||||||||||||  |||||| || |||||||||||    
T  27398711 gaaatggaagatggctcttacccaagctgctaacttctccggccaccattttagtcaagggtaccccactttacttaat 27398633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 26823900 - 26824184
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||  |||||| || || ||||    
T  26823900 tttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctacaaggaaaaggggcgcctcgttt 26823999  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaa 219  Q
    |||||||||||||||| ||||||||| || |||||||||||||  |||||||||||| |  ||||||||||||||| | |||||| |||  |||||||||    
T  26824000 tgcctgttttctatggtgtggatcctggtgacatacgacatcagcgtgggagttatgctatacatctcactaagcatgaaaagaggttcggaaataacaa 26824099  T
Q  220 gaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    | |||||||||||   |||| ||||||||||   |||||||   |||||||| ||||||| ||||  |||||||||| |||||||    
T  26824100 ggaaaacatggagaaattgcttcaatggaagaaggctctgaaacaagctgctgacttgtctggctttcattttagtcttgggtac 26824184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 40 - 318
Target Start/End: Original strand, 26142945 - 26143226
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || || || ||||||||||  |||    
T  26142945 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtg 26143044  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    || |||| |||||||||| |||| ||||||| ||||||||| ||||| |||||||| | | |||| || ||||||||| |||||||||||||||| ||||    
T  26143045 gaacctactcacatacgaaatcagagtgggatttatggtgagcatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgc 26143144  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcc---tgggtactcctctttacttaa 318  Q
     |||||||||| ||||||| |   |||||||||||||||||||||| |||| ||||||   ||||||| || ||||||||||    
T  26143145 gtcaatggaagatagctcttatccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaa 26143226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 40 - 324
Target Start/End: Original strand, 25538620 - 25538907
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || |  | || ||||| ||||||||||  |||    
T  25538620 caactatgcatcttcttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtg 25538719  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    || |||| |||  |||||||||| ||||||||||||||||| ||| | |||||||| | | |||| || ||||||||  |||||||||||||||| ||||    
T  25538720 gaacctactcagttacgacatcagagtgggagttatggtgagcattttactaagcatgaagagaggtttcaaaataatgagaaaaacatggagcgattgc 25538819  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcc---tgggtactcctctttacttaattcttg 324  Q
     |||||||||| ||||||| |   |||||||||||||||||||||| |||| ||||||   ||||||| || |||||||||| |||||    
T  25538820 gtcaatggaagatagctcttatccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaatcttg 25538907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 20 - 298
Target Start/End: Complemental strand, 27718506 - 27718228
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||    
T  27718506 tttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttt 27718407  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    ||||||||||||  |||||||| |||| | || | |||||||| |  || |||||||||||| ||| |  || |||| | |||||| || |||||| | |    
T  27718406 tgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgata 27718308  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
    |||| ||||||||| ||||||| | ||||||  | |||||||   | ||||||||||||||||||||||||  |||||||    
T  27718307 agaataacatggagaggttgcagcgatggaaagtggctctgagccaggctgctaacttgtccggctaccatgatagtcct 27718228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 26623036 - 26623193
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  26623036 tttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttt 26623135  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatgg 177  Q
    |||| || ||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  26623136 tgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg 26623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 26729014 - 26729171
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  26729014 tttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttt 26729113  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatgg 177  Q
    |||| || ||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  26729114 tgcccgtcttctatggcgtggatcctactcacatacggcatcaaactgggagttatgg 26729171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 40 - 298
Target Start/End: Original strand, 25481822 - 25482080
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || || || ||||||||||| |||    
T  25481822 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtg 25481921  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgc 239  Q
    ||||||| | |  | |||| ||| |   | |||||||||||| |||| |||||||| | | || | |||||||||||| |||||||||||||||| ||||    
T  25481922 gatcctactgatgttcgacgtcatacatgtagttatggtgaatatctgactaagcatgaagaggggttccaaaataacgagaaaaacatggagcgattgc 25482021  T
Q  240 atcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
     |||||||||| | ||||| ||| |||||||||| ||||||||||| |||| |||||||    
T  25482022 gtcaatggaagatggctcttactcaagctgctaatttgtccggctatcattatagtcct 25482080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 27679006 - 27679132
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||     
T  27679006 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttc 27679105  T
Q  120 tgcctgttttctatggcgtggatccta 146  Q
    |||||||||||| ||| ||||| ||||    
T  27679106 tgcctgttttctttggtgtggaaccta 27679132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 320
Target Start/End: Original strand, 28781199 - 28781499
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||    
T  28781199 tttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttt 28781298  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    |||||||||||| ||| |||||||||| | |  | |||||||| |  ||   |||||||||| ||| |  ||   || | |||||| || |||||| | |    
T  28781299 tgcctgttttctttggtgtggatcctactaatgtgcgacatcatacaggtccttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgata 28781397  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    || | ||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||  |  |||||||||    
T  28781398 aggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcctgggtacgacaatttacttaa 28781497  T
Q  319 tt 320  Q
    ||    
T  28781498 tt 28781499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 320
Target Start/End: Original strand, 28786338 - 28786638
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||| ||| | ||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||    
T  28786338 tttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttt 28786437  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    |||||||||||| ||| || ||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||  ||| | |||||| || |||||| | |    
T  28786438 tgcctgttttctttggtgtcgatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctgggcatgaaaagaggtttcaaaatgata 28786536  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    || | ||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||  || |||||||||    
T  28786537 aggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcctgggtacgactatttacttaa 28786636  T
Q  319 tt 320  Q
    ||    
T  28786637 tt 28786638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 20 - 298
Target Start/End: Complemental strand, 27593147 - 27592869
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||| | |||||    
T  27593147 tttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgccctgttt 27593048  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    |||||||||||| ||| |||||||||  |||  | |||||||| |  || |||||||||||| ||| |  || |||| | |||||| || |||||| |      
T  27593047 tgcctgttttctttggtgtggatccttctcatgtgcgacatcataaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgatc 27592949  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
     ||||||||||||| |||||||   ||||||    |||||||   | ||||||||||||||||||||||||  |||||||    
T  27592948 cgaaaaacatggagaggttgcagggatggaaagacgctctgagccaggctgctaacttgtccggctaccatgatagtcct 27592869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 20 - 298
Target Start/End: Complemental strand, 27611129 - 27610851
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||    
T  27611129 tttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttt 27611030  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    ||||||||||||  |||||||| |||| | |  | |||||||| |  || |||||||||||| ||| |  || |||| | |||||| || |||||| | |    
T  27611029 tgcctgttttcttcggcgtggaacctactaaagtgcgacatcagaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgata 27610931  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
    |||| ||||||||| |||||||   ||||||  | |||||||   | ||||| ||||| ||||||||||||  |||||||    
T  27610930 agaataacatggagaggttgcagggatggaaagtggctctgagccaggctgcaaacttttccggctaccatgatagtcct 27610851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 27724972 - 27724811
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||    
T  27724972 tttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttt 27724873  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa 181  Q
    ||||||||||||  |||||||| |||| | || | |||||||| |  || ||||||||||||    
T  27724872 tgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaa 27724811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 28792459 - 28792743
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||| ||| | ||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||    
T  28792459 tttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttt 28792558  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    |||||||||||| ||| || ||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||  ||| | |||||| || |||||| | |    
T  28792559 tgcctgttttctttggtgtcgatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctgggcatgaaaagaggtttcaaaatgata 28792657  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    || | ||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  28792658 aggataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcctgggtac 28792743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 27677741 - 27677630
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||     
T  27677741 tttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttc 27677642  T
Q  120 tgcctgttttct 131  Q
    ||||||||||||    
T  27677641 tgcctgttttct 27677630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 27706529 - 27706420
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||     
T  27706529 tttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttc 27706430  T
Q  120 tgcctgtttt 129  Q
    ||||||||||    
T  27706429 tgcctgtttt 27706420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 26048925 - 26049080
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||| ||||  |||    
T  26048925 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtg 26049024  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagca 195  Q
    || |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||||||    
T  26049025 gaacctactcacatacgacatcatagtggaagttatggtgagcatcttactaagca 26049080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 26070094 - 26070249
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |  | || ||||| ||||| ||||  |||    
T  26070094 caactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtg 26070193  T
Q  140 gatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagca 195  Q
    || |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||||||    
T  26070194 gaacctactcacatacgacatcatagtggaagttatggtgagcatcttactaagca 26070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 27698621 - 27698510
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| || ||||    
T  27698621 tttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttt 27698522  T
Q  120 tgcctgttttct 131  Q
    ||||||||||||    
T  27698521 tgcctgttttct 27698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 28139607 - 28139745
Alignment:
Q  26 cctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctg 125  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||| ||||||||  || | ||||||||||    
T  28139607 cctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgcttcaacacaaagggatgtttggttttgcctg 28139706  T
Q  126 ttttctatggcgtggatcctagtcacatacgacatcaaa 164  Q
    |||||||||| |||||||||  |||||| ||||||||||    
T  28139707 ttttctatggtgtggatccttctcacattcgacatcaaa 28139745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 318
Target Start/End: Original strand, 26884235 - 26884523
Alignment:
Q  32 ttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccaca--tcatgcactgctacaagacaaagggtcgtcttgttttgcctgtttt 129  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||| || ||||||||||||||    
T  26884235 ttttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgttttgcctgtttt 26884334  T
Q  130 ctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaagaaaaacat 228  Q
       ||| |||||||||| | |  | |||||||| |  || |||||||||||| ||| |  || | || | ||| || || |||||| | ||| | |||||    
T  26884335 tgttggtgtggatcctactgatgtgcgacatcatacaggtagttatggtgaagcat-tggctgaccatgaaaaaaggtttcaaaatgataaggataacat 26884433  T
Q  229 ggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    |||| ||||||| | ||||||  | ||| |||   ||| ||||||||||||||||||||||||||||| ||||||  || ||||||||||    
T  26884434 ggagaggttgcagcgatggaaaatggctatgaggcaagttgctaacttgtccggctaccattttagtcttgggtatcccactttacttaa 26884523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 26937160 - 26937313
Alignment:
Q  26 cctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctg 125  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||| ||||||||| |||| |||  ||||||||     
T  26937160 cctgtattctctatcaactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgccta 26937259  T
Q  126 ttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtg 179  Q
    |||||||||  |||||||||  |||| | ||||| |||| ||||||||||||||    
T  26937260 ttttctatgaagtggatccttctcacgttcgacaccaaactgggagttatggtg 26937313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 27604832 - 27604711
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||| || ||||||| ||||||||||||  | ||||    
T  27604832 tttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcgttt 27604733  T
Q  120 tgcctgttttctatggcgtgga 141  Q
    |||||||||||| ||| |||||    
T  27604732 tgcctgttttctttggtgtgga 27604711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 23 - 304
Target Start/End: Original strand, 26861679 - 26861957
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||| |||||  ||||   ||||  |||||||||  | |||||||    
T  26861679 attcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactg---caaggaaaagggtcgcgtcgttttgc 26861775  T
Q  123 ctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataacaaga 221  Q
    |||||||||||||| ||||||||| | |  | |||||||| || || | |||||||||| ||| |  ||||||| | ||| || || |||||| | | |     
T  26861776 ctgttttctatggcatggatcctactaatgtgcgacatcatagaggtatttatggtgaagcat-tggctaagcatgaaaaaaggtttcaaaatgatatgg 26861874  T
Q  222 aaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    | ||||||||| |||||||   ||||||  | |||||||   |||||||||||||||| ||||||||||||||||||||||||    
T  26861875 ataacatggagaggttgcagagatggaaagttgctctgaaccaagctgctaacttgtcaggctaccattttagtcctgggtac 26861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 146
Target Start/End: Original strand, 26802502 - 26802628
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||||||||||||   |||||| |||||||||||||| ||||| || || ||||| |||||||||||||| || || |    
T  26802502 tttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtct 26802601  T
Q  120 tgcctgttttctatggcgtggatccta 146  Q
    ||||| |||||| ||| ||||||||||    
T  26802602 tgcctattttctttggtgtggatccta 26802628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 298
Target Start/End: Original strand, 27214498 - 27214758
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 140  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  || |||| ||||  ||| ||||| |||||| | ||||||||||||||||| |    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttg 27214597  T
Q  141 atcctagtcacatacgacatc---aaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggtt 237  Q
    | |||  |||| | |||||||   | |     ||||||||||||   ||  ||||||| | | |||| || |||||||||||| ||||||||||||||||    
T  27214598 aaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggtt 27214697  T
Q  238 gcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
    |||  |||||||| ||||||| |   ||||||||||||| || ||||| |||| |||||||    
T  27214698 gcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcattatagtcct 27214758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 298
Target Start/End: Complemental strand, 27234730 - 27234470
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtgg 140  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  || |||| ||||  ||| ||||| |||||| | ||||||||||||||||| |    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttg 27234631  T
Q  141 atcctagtcacatacgacatc---aaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggtt 237  Q
    | |||  |||| | |||||||   | |     ||||||||||||   ||  ||||||| | | |||| || |||||||||||| ||||||||||||||||    
T  27234630 aaccttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggtt 27234531  T
Q  238 gcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
    |||  |||||||| ||||||| |   ||||||||||||| || ||||| |||| |||||||    
T  27234530 gcagaaatggaagatagctcttaaccaagctgctaacttatctggctatcattatagtcct 27234470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 27531324 - 27531198
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||| || ||||||   |||||||| ||||||||||||||||||||||||||||| |||||||  || |||||| | ||||||||| |||||||||    
T  27531324 tttattcccgtattttctgaaaactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacgatacaaagggttgtcttgttt 27531225  T
Q  120 tgcctgttttctatggcgtggatccta 146  Q
    ||||||||||   ||| ||||||||||    
T  27531224 tgcctgtttttattggtgtggatccta 27531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 27604444 - 27604375
Alignment:
Q  400 tttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatatt 469  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  27604444 tttttatttacgtttttaaacaagtattagttatttatatgtcaaaatagttagaaatgtataatatatt 27604375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 31284348 - 31284473
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||| || |||||||||  ||||||||||||||| || ||||||||||||||||||||||||||||| ||||  || |||  ||| ||||| || ||||    
T  31284348 tttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgttt 31284447  T
Q  120 tgcctgttttctatggcgtggatcct 145  Q
    |||| ||||||| |||||||||||||    
T  31284448 tgcccgttttctttggcgtggatcct 31284473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 304
Target Start/End: Original strand, 26949745 - 26950005
Alignment:
Q  44 tatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatc 143  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||| |||| || ||||  ||| ||||| |||||| |||| ||||||||||  || || |    
T  26949745 tatgcttcttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagttttctatgatgtagaac 26949844  T
Q  144 ctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatca 243  Q
    ||  |||| | |||||||| | |   ||||||||||||   ||  ||||||| | | |||| |||||||| | ||| |||||||||||||||||||   |    
T  26949845 cttctcacgtgcgacatcagaattatagttatggtgaagcacttgctaagcatgaagagaggttccaaaagagcaaaaaaaacatggagcggttgctgaa 26949944  T
Q  244 atggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    ||||||| |||||||||   ||| |||| |||| || ||||||||||| | || |||||||    
T  26949945 atggaagatagctctgaacaaagttgctgacttatctggctaccatttcaatcttgggtac 26950005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 28242867 - 28242978
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||| || || || |||||||    
T  28242867 attcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgc 28242966  T
Q  123 ctgttttctatg 134  Q
    |  |||||||||    
T  28242967 caattttctatg 28242978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 27427385 - 27427283
Alignment:
Q  368 aataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatat 466  Q
    ||||||||||||||||||||||  | ||||||||||| |||||  ||||||||||| | ||||||||||||| ||||||||||||| |||||||| ||||    
T  27427385 aataccatcttaaagcctaaatgtgtaacaccttttttatttatgtttttaaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatat 27427286  T
Q  467 att 469  Q
    |||    
T  27427285 att 27427283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 27427713 - 27427607
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  27427713 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 27427614  T
Q  140 gatccta 146  Q
    || ||||    
T  27427613 gaaccta 27427607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 28150012 - 28150111
Alignment:
Q  35 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 134  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||| |||| |||||||| |  | ||| ||||| |||||||||    
T  28150012 tctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggttgcttagttctgcctattttctatg 28150111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 469
Target Start/End: Original strand, 26802850 - 26802956
Alignment:
Q  364 caataataccatcttaaagcctaaattggaaacaccttt-ttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatg 462  Q
    |||||||  ||||||||||  ||||| ||||| |||||| |||| ||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||     
T  26802850 caataatctcatcttaaaggttaaatgggaaatacctttcttatatacgtttttaaacaagtattagttatttatatgttgaaatagttagaaatgtata 26802949  T
Q  463 atatatt 469  Q
    |||||||    
T  26802950 atatatt 26802956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 28181189 - 28181288
Alignment:
Q  35 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 134  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||  || ||||| ||||||||  |||||||||    
T  28181189 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatg 28181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 28227013 - 28227124
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||| ||||  |||  | || ||||||||||    
T  28227013 attcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgc 28227112  T
Q  123 ctgttttctatg 134  Q
    |  |||||||||    
T  28227113 caattttctatg 28227124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 28781516 - 28781606
Alignment:
Q  373 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagtatt-agttatttataagtcaaaatagttagaaatgtat 461  Q
    ||||||||||||||||| |||||||| |||| ||||||| ||||||||||| |||| | |||||| || ||||||||||||||||||||||    
T  28781516 catcttaaagcctaaatgggaaacactttttctatttacgtttttaaacaattatttaattatttttatgtcaaaatagttagaaatgtat 28781606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 28297837 - 28297760
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaag 100  Q
    |||||||| || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  28297837 attcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28297760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 28514236 - 28514313
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaag 100  Q
    |||||||| || |||| ||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  28514236 attcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28514313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 26342043 - 26341975
Alignment:
Q  38 atcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaag 106  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||| |||| |||||    
T  26342043 atcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattgcttcaaggcaaag 26341975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 28234627 - 28234691
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 87  Q
    |||||||| || |||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  28234627 attcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcat 28234691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 136
Target Start/End: Original strand, 26848741 - 26848836
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggc 136  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||| || |||| ||||  ||||||| |  | ||| | |||||||||||||||    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgctccaaggaaaagggtagcatggttattcctgttttctatggc 26848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 28185441 - 28185540
Alignment:
Q  35 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 134  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||||||||||  |||||| ||||  ||  || ||||| ||||||||  |||||||||    
T  28185441 tctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattaactgcttcaaggaaagcgggcgtctagttttgccaattttctatg 28185540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 28786655 - 28786743
Alignment:
Q  373 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagtatt-agttatttataagtcaaaatagttagaaatgtat 461  Q
    |||||||||||||||   ||||||||||||| ||||||| |||||||||||||||| | |||||| || ||||||||||||||||||||||    
T  28786655 catcttaaagcctaag--ggaaacaccttttctatttacgtttttaaacaagtatttaattatttttatgtcaaaatagttagaaatgtat 28786743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 28792776 - 28792864
Alignment:
Q  373 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagtatt-agttatttataagtcaaaatagttagaaatgtat 461  Q
    |||||||||||||||   ||||||||||||| ||||||| |||||||||||||||| | |||||| || ||||||||||||||||||||||    
T  28792776 catcttaaagcctaag--ggaaacaccttttctatttacgtttttaaacaagtatttaattatttttatgtcaaaatagttagaaatgtat 28792864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 2184369 - 2184415
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 87  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  2184369 aactatgcttcttcttcattttgtttggacgaacttgtccacatcat 2184415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 25071741 - 25071835
Alignment:
Q  42 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggc 136  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||| || ||||  |||| |||| |||||| | ||  |||||||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcactacttcaaggaaaagagtcgccttgttctaccaattttctatggc 25071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 26975134 - 26975179
Alignment:
Q  42 actatgcctcttcttcattttgtttggacgaacttgtccacatcat 87  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcat 26975179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 26646892 - 26646990
Alignment:
Q  373 catcttaaagcctaaattggaaacacct--ttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatatt 469  Q
    ||||||||||| ||||| |||||||| |  ||||||| |  ||||||||||||||| | ||||||||| ||||||| |||||||| ||||| |||||||    
T  26646892 catcttaaagcttaaataggaaacacatatttttattaatgtttttaaacaagtataaattatttatatgtcaaaagagttagaactgtataatatatt 26646990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 26752860 - 26752958
Alignment:
Q  373 catcttaaagcctaaattggaaacacct--ttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatatt 469  Q
    ||||||||||| ||||| |||||||| |  ||||||| |  ||||||||||||||| | ||||||||| ||||||| |||||||| ||||| |||||||    
T  26752860 catcttaaagcttaaataggaaacacatatttttattaatgtttttaaacaagtataaattatttatatgtcaaaagagttagaactgtataatatatt 26752958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 2184980 - 2185046
Alignment:
Q  42 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaaggg 108  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| |  |||| |||| |||||||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg 2185046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 26617868 - 26617920
Alignment:
Q  206 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct 258  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  26617868 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 26617920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 26723796 - 26723848
Alignment:
Q  206 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct 258  Q
    ||||||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  26723796 ttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 26723848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 461
Target Start/End: Complemental strand, 27592799 - 27592698
Alignment:
Q  364 caataataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagta---ttagttatttataagtcaaaatagttagaaatgt 459  Q
    |||||||  ||||||||||  ||||  ||||| |||||||| || |||| |||||||||||||   ||||||||||||| ||| ||||||||||||||||    
T  27592799 caataatctcatcttaaaggttaaaagggaaataccttttttatatacagttttaaacaagtactattagttatttatatgtcgaaatagttagaaatgt 27592700  T
Q  460 at 461  Q
    ||    
T  27592699 at 27592698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 461
Target Start/End: Original strand, 27679354 - 27679455
Alignment:
Q  364 caataataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagta---ttagttatttataagtcaaaatagttagaaatgt 459  Q
    |||||||  ||||||||||  ||||  ||||| |||||||| || |||| |||||||||||||   ||||||||||||| ||| ||||||||||||||||    
T  27679354 caataatctcatcttaaaggttaaaagggaaataccttttttatatacagttttaaacaagtactattagttatttatatgtcgaaatagttagaaatgt 27679453  T
Q  460 at 461  Q
    ||    
T  27679454 at 27679455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 304
Target Start/End: Complemental strand, 28297654 - 28297556
Alignment:
Q  206 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||   ||||| ||| || |||||||||| || ||| ||||||| | |||| |||||    
T  28297654 ttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtac 28297556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 28514419 - 28514517
Alignment:
Q  206 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||   ||||| ||| || |||||||||| || ||| ||||||| | |||| |||||    
T  28514419 ttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtac 28514517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 25506961 - 25506852
Alignment:
Q  170 agttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctg 269  Q
    |||||||||||| |||| |||||||| | | |||  || |||||||| ||||||||||||||| | | ||||||||||||  ||||||| ||  || |||    
T  25506961 agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctctaacacaatctg 25506862  T
Q  270 ctaacttgtc 279  Q
    ||||| ||||    
T  25506861 ctaacctgtc 25506852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 26811755 - 26811807
Alignment:
Q  206 ttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctct 258  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||| |||||||    
T  26811755 ttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctct 26811807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 28325556 - 28325616
Alignment:
Q  35 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgct 95  Q
    |||||||| ||||| |||||||| ||||| ||||| |||||||||||||| || |||||||    
T  28325556 tctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 458
Target Start/End: Complemental strand, 27706145 - 27706084
Alignment:
Q  400 tttttatttacatttttaaacaagta---ttagttatttataagtcaaaatagttagaaatg 458  Q
    ||||||| |||| |||||||||||||   ||||||||||||| ||| |||||||||||||||    
T  27706145 tttttatatacagttttaaacaagtactattagttatttatatgtcgaaatagttagaaatg 27706084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 25507036 - 25506978
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgt 78  Q
    |||||||| ||  ||||||||||||||||||||||   |||||||||||| ||||||||    
T  25507036 tttattccggttctttctatcaactatgcctcttcaaaattttgtttggaggaacttgt 25506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 26824240 - 26824294
Alignment:
Q  392 gaaacacctttttatttacatttttaaacaagtattagttatttataagtcaaaa 446  Q
    ||||||| ||||| |||| ||| ||||||||||||||||||||||| ||| ||||    
T  26824240 gaaacacatttttttttatattcttaaacaagtattagttatttattagtaaaaa 26824294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 27665223 - 27665177
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 87  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||    
T  27665223 aactatgctacttcttcattttgtttagatgaacttgtccacatcat 27665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 27698301 - 27698255
Alignment:
Q  423 gtattagttatttataagtcaaaatagttagaaatgtatgatatatt 469  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||    
T  27698301 gtattagttatttatatgtcgaaatagttagaaatttataatatatt 27698255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 28098475 - 28098429
Alignment:
Q  41 aactatgcctcttcttcattttgtttggacgaacttgtccacatcat 87  Q
    |||||||| |||||||  ||||||||||| |||||||||||||||||    
T  28098475 aactatgcttcttctttgttttgtttggatgaacttgtccacatcat 28098429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 29826171 - 29826245
Alignment:
Q  104 aagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggt 178  Q
    ||||||||||| ||||||||| |||||||||  |||||||||  |||  | |||||||| | |||||||||||||    
T  29826171 aagggtcgtctcgttttgcctattttctatgatgtggatccttctcatgtgcgacatcagactgggagttatggt 29826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 25483513 - 25483570
Alignment:
Q  412 tttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatatt 469  Q
    |||| |||||||| | ||||||||||| ||||||| |||||||| || ||||||||||    
T  25483513 ttttaaaacaagtgtaagttatttatatgtcaaaaaagttagaattgcatgatatatt 25483570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 27677331 - 27677294
Alignment:
Q  424 tattagttatttataagtcaaaatagttagaaatgtat 461  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  27677331 tattagttatttatatgtcgaaatagttagaaatgtat 27677294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 28325743 - 28325820
Alignment:
Q  226 catggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggta 303  Q
    ||||||| |||||||  |||||||| | ||||| ||| || |||||||||| || ||| ||||||| |||||||||||    
T  28325743 catggagaggttgcagaaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggta 28325820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 31284714 - 31284782
Alignment:
Q  400 tttttatttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatatatt 469  Q
    |||||||||| || ||||||||| ||||||||| || || ||||||| | |||||| |||||||||||||    
T  31284714 tttttatttatatatttaaacaaatattagtta-ttgtatgtcaaaacaattagaattgtatgatatatt 31284782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 26959415 - 26959519
Alignment:
Q  209 caaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcct 308  Q
    ||||||| |||| ||||||||||||||||||   ||||||||  |||||| |   ||||||||||||| || ||| ||||||| | || ||||||| | |    
T  26959415 caaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtaccctt 26959514  T
Q  309 cttta 313  Q
    |||||    
T  26959515 cttta 26959519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 134; Significance: 1e-69; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 20 - 320
Target Start/End: Complemental strand, 4798 - 4498
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||  |||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||    
T  4798 tttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttt 4699  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    ||||||||||||  |||||||| |||| | || | |||||||  |  || |||||||||||| ||| |  || |||| | |||||| || |||||| | |    
T  4698 tgcctgttttcttcggcgtggaacctactaacgtgcgacatctgaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgata 4600  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||    
T  4599 agaataacatggagaggttgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcatgggtacgcctatttacttaa 4500  T
Q  319 tt 320  Q
    ||    
T  4499 tt 4498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 320
Target Start/End: Complemental strand, 13759 - 13459
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||| ||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||||| ||||| || ||||    
T  13759 tttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttt 13660  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    |||||||||||| ||| |||||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||   || | |||||| || |||||| | |    
T  13659 tgcctgttttctttggtgtggatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgata 13561  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||| |||||||  || |||||||||    
T  13560 agaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcatgggtacgactatttacttaa 13461  T
Q  319 tt 320  Q
    ||    
T  13460 tt 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 461
Target Start/End: Complemental strand, 4481 - 4391
Alignment:
Q  373 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagta-ttagttatttataagtcaaaatagttagaaatgtat 461  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||| ||| || || |||| |||||||||||||||||    
T  4481 catcttaaagcctaaatgggaaacaccttttatatttacgtttttaaacaagtatttaattacttttatgtcacaatagttagaaatgtat 4391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 461
Target Start/End: Complemental strand, 13442 - 13352
Alignment:
Q  373 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagta-ttagttatttataagtcaaaatagttagaaatgtat 461  Q
    ||||||||||||||||| |||||||| |||| ||||||| |||||||||||||| ||| ||| || || ||||||||||||||||||||||    
T  13442 catcttaaagcctaaatgggaaacactttttctatttacgtttttaaacaagtatttaattacttttatgtcaaaatagttagaaatgtat 13352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 320
Target Start/End: Original strand, 7585 - 7885
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    |||||||||||||||||||||||||| ||| ||||   |||||| |||||||||||||| ||||| || || |||||||||||| | ||||| || ||||    
T  7585 tttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgttt 7684  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    |||||||||||| ||| |||||||||| | |  | |||||||| |  ||  ||||||||||| ||| |  ||   || | |||||| || |||||| | |    
T  7685 tgcctgttttctttggtgtggatcctactaatgtgcgacatcatacaggtcgttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgata 7783  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaa 318  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||| |||||||  || |||||||||    
T  7784 agaataacatggagcgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcatgggtacgactatttacttaa 7883  T
Q  319 tt 320  Q
    ||    
T  7884 tt 7885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 7902 - 7992
Alignment:
Q  373 catcttaaagcctaaattggaaacacctttt-tatttacatttttaaacaagta-ttagttatttataagtcaaaatagttagaaatgtat 461  Q
    ||||||||||||||||| |||||||| |||| ||||||| |||||||||||||| ||| ||| || || ||||||||||||||||||||||    
T  7902 catcttaaagcctaaatgggaaacactttttctatttacgtttttaaacaagtatttaattacttttatgtcaaaatagttagaaatgtat 7992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 298
Target Start/End: Complemental strand, 14482 - 14205
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttt 119  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||    
T  14482 tttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttt 14384  T
Q  120 tgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaa-catctcactaagcacggaaagagtttccaaaataaca 218  Q
    ||||||||||||  |||||||| |||| | || | |||||||| |  || |||||||||||| ||| |  || |||| | |||||| || |||||| |      
T  14383 tgcctgttttcttcggcgtggaacctactaacgtgcgacatcagaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgatc 14285  T
Q  219 agaaaaacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcct 298  Q
     ||||||||||||| |||||||   ||||||    |||||||   | ||||||||||||||||||||||||  |||||||    
T  14284 cgaaaaacatggagaggttgcagggatggaaagaggctctgagccaggctgctaacttgtccggctaccatgatagtcct 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 3549 - 3422
Alignment:
Q  20 tttattcctgtgttttctatcaac-tatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgtt 118  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||    
T  3549 tttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgtt 3450  T
Q  119 ttgcctgttttctatggcgtggatccta 146  Q
     |||||||||| | ||| ||||| ||||    
T  3449 ctgcctgttttatttggtgtggaaccta 3422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 56; Significance: 5e-23; HSPs: 5)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 43029 - 43140
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||| || || || |||||||    
T  43029 attcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgc 43128  T
Q  123 ctgttttctatg 134  Q
    |  |||||||||    
T  43129 caattttctatg 43140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 34788 - 34899
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||  || ||||| |||||||    
T  34788 attcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgc 34887  T
Q  123 ctgttttctatg 134  Q
    |  |||||||||    
T  34888 caattttctatg 34899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 27511 - 27622
Alignment:
Q  23 attcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgc 122  Q
    |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||| ||||  |||  | || ||||||||||    
T  27511 attcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgc 27610  T
Q  123 ctgttttctatg 134  Q
    |  |||||||||    
T  27611 caattttctatg 27622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 116871 - 116931
Alignment:
Q  35 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgct 95  Q
    |||||||| ||||| |||||||| ||||| ||||| |||||||||||||| || |||||||    
T  116871 tctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 117058 - 117135
Alignment:
Q  226 catggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggta 303  Q
    ||||||| |||||||  |||||||| | ||||| ||| || |||||||||| || ||| ||||||| |||||||||||    
T  117058 catggagaggttgcagaaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggta 117135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 59650 - 59756
Alignment:
Q  40 caactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtg 139  Q
    ||||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||||| || |||||| | || |||||||||||||||| ||| |||    
T  59650 caactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtg 59749  T
Q  140 gatccta 146  Q
    || ||||    
T  59750 gaaccta 59756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 59978 - 60080
Alignment:
Q  368 aataccatcttaaagcctaaattggaaacaccttttt-atttacatttttaaacaagtattagttatttataagtcaaaatagttagaaatgtatgatat 466  Q
    ||||||||||||||||||||||  | ||||||||||| |||||  ||||||||||| | ||||||||||||| ||||||||||||| |||||||| ||||    
T  59978 aataccatcttaaagcctaaatgtgtaacaccttttttatttatgtttttaaacaattgttagttatttatatgtcaaaatagttaaaaatgtataatat 60077  T
Q  467 att 469  Q
    |||    
T  60078 att 60080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 178
Target Start/End: Complemental strand, 58394 - 58251
Alignment:
Q  35 tctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 134  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||| | ||  | | || || || ||||||||  |||||||||    
T  58394 tctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgcttcgaggaatatgggcgcctagttttgccaattttctatg 58295  T
Q  135 gcgtggatcctagtcacatacgacatcaaagtgggagttatggt 178  Q
     |||||| |||  |||| | |||||||||  ||| |||||||||    
T  58294 acgtggaaccttctcacgtgcgacatcaagatggaagttatggt 58251  T

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Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 3279748 - 3279815
Alignment:
Q  20 tttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcat 87  Q
    |||||||| || || |||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  3279748 tttattccggtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtccacatcat 3279815  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 17993789 - 17993744
Alignment:
Q  42 actatgcctcttcttcattttgtttggacgaacttgtccacatcat 87  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17993789 actatgcttcttcttcattttgtttagacgaacttgtccacatcat 17993744  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 3279967 - 3280047
Alignment:
Q  224 aacatggagcggttgcatcaatggaagttagctctgactgaagctgctaacttgtccggctaccattttagtcctgggtac 304  Q
    |||||| || |||||||| |||||||| | ||||| |   |||| ||||||||||||||| ||||||||| |||| |||||    
T  3279967 aacatgaagaggttgcataaatggaagatggctcttaaccaagcagctaacttgtccggccaccattttaatcctaggtac 3280047  T

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