View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20008_low_7 (Length: 473)

Name: NF20008_low_7
Description: NF20008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20008_low_7
NF20008_low_7
[»] chr8 (23 HSPs)
chr8 (117-435)||(30984190-30984508)
chr8 (149-434)||(30210394-30210679)
chr8 (196-435)||(34774315-34774554)
chr8 (117-293)||(189774-189950)
chr8 (117-293)||(717378-717554)
chr8 (117-293)||(878485-878661)
chr8 (1-121)||(30210955-30211075)
chr8 (1-121)||(30982815-30982935)
chr8 (1-121)||(34774034-34774154)
chr8 (280-390)||(629476-629586)
chr8 (1-121)||(193758-193877)
chr8 (1-121)||(721362-721481)
chr8 (1-121)||(882469-882588)
chr8 (1-121)||(44240493-44240611)
chr8 (258-356)||(35164381-35164474)
chr8 (258-356)||(35802344-35802442)
chr8 (288-358)||(924099-924169)
chr8 (258-356)||(45276403-45276501)
chr8 (391-436)||(308870-308915)
chr8 (258-356)||(8416662-8416760)
chr8 (284-356)||(36821653-36821725)
chr8 (261-323)||(3590107-3590169)
chr8 (42-84)||(31778710-31778752)
[»] chr2 (25 HSPs)
chr2 (117-435)||(40254343-40254661)
chr2 (135-434)||(14379660-14379959)
chr2 (219-435)||(31786698-31786914)
chr2 (218-434)||(44282494-44282710)
chr2 (214-425)||(31686773-31686984)
chr2 (1-121)||(14380478-14380598)
chr2 (1-121)||(31686525-31686645)
chr2 (1-121)||(31787021-31787141)
chr2 (1-121)||(40254881-40255001)
chr2 (1-121)||(2443137-2443257)
chr2 (226-430)||(2443663-2443868)
chr2 (19-121)||(13896370-13896470)
chr2 (19-121)||(14036987-14037087)
chr2 (258-356)||(37640761-37640859)
chr2 (258-356)||(37996718-37996816)
chr2 (258-353)||(3739048-3739143)
chr2 (258-356)||(7473518-7473616)
chr2 (258-356)||(17480814-17480912)
chr2 (261-322)||(37551592-37551653)
chr2 (258-356)||(14033372-14033470)
chr2 (258-356)||(43342277-43342375)
chr2 (258-356)||(13892752-13892850)
chr2 (258-356)||(14032877-14032975)
chr2 (258-356)||(35458185-35458283)
chr2 (261-319)||(44002684-44002742)
[»] chr3 (26 HSPs)
chr3 (117-434)||(51128903-51129220)
chr3 (117-434)||(47141290-47141607)
chr3 (117-435)||(52691926-52692244)
chr3 (139-435)||(1527530-1527826)
chr3 (181-434)||(38469068-38469321)
chr3 (214-435)||(47696998-47697219)
chr3 (1-121)||(1527879-1527999)
chr3 (1-121)||(38469554-38469674)
chr3 (1-121)||(47140955-47141075)
chr3 (1-121)||(51124975-51125095)
chr3 (1-121)||(52692913-52693033)
chr3 (258-356)||(33025798-33025896)
chr3 (258-356)||(42074392-42074490)
chr3 (257-356)||(53687376-53687475)
chr3 (258-356)||(51229727-51229825)
chr3 (287-356)||(51407464-51407533)
chr3 (258-354)||(48181071-48181167)
chr3 (260-338)||(11263709-11263787)
chr3 (258-356)||(42274518-42274616)
chr3 (258-356)||(45150598-45150696)
chr3 (260-356)||(48254506-48254602)
chr3 (258-356)||(28182370-28182468)
chr3 (261-323)||(30809842-30809904)
chr3 (258-356)||(31813401-31813499)
chr3 (261-323)||(44610827-44610889)
chr3 (261-323)||(44328692-44328754)
[»] chr1 (31 HSPs)
chr1 (117-434)||(38843151-38843468)
chr1 (117-435)||(51488384-51488702)
chr1 (117-434)||(50979124-50979441)
chr1 (117-435)||(27000155-27000473)
chr1 (134-434)||(7593122-7593409)
chr1 (197-433)||(5271472-5271708)
chr1 (217-434)||(26821382-26821599)
chr1 (218-433)||(36496041-36496256)
chr1 (218-434)||(38627538-38627754)
chr1 (231-435)||(15353227-15353431)
chr1 (1-121)||(5271211-5271331)
chr1 (1-121)||(26999996-27000116)
chr1 (1-121)||(38843688-38843808)
chr1 (1-121)||(50978531-50978651)
chr1 (1-121)||(51488080-51488200)
chr1 (1-118)||(15353534-15353651)
chr1 (1-121)||(7592910-7593030)
chr1 (1-121)||(27576217-27576337)
chr1 (248-430)||(27575898-27576081)
chr1 (1-121)||(46407859-46407977)
chr1 (1-121)||(35606701-35606819)
chr1 (258-357)||(47655888-47655987)
chr1 (1-44)||(26821785-26821828)
chr1 (288-358)||(11051192-11051262)
chr1 (261-323)||(1762251-1762313)
chr1 (258-356)||(6706132-6706230)
chr1 (258-356)||(13509940-13510038)
chr1 (261-358)||(11829075-11829172)
chr1 (258-356)||(46406421-46406519)
chr1 (258-356)||(35604814-35604912)
chr1 (293-358)||(46033716-46033781)
[»] chr5 (26 HSPs)
chr5 (117-433)||(29542330-29542646)
chr5 (139-435)||(3260749-3261045)
chr5 (134-434)||(42663356-42663656)
chr5 (218-434)||(33114956-33115172)
chr5 (218-433)||(14082814-14083029)
chr5 (1-121)||(3260542-3260662)
chr5 (1-121)||(29542026-29542146)
chr5 (1-121)||(42663748-42663868)
chr5 (1-121)||(27738157-27738275)
chr5 (1-121)||(33232828-33232946)
chr5 (1-121)||(7071626-7071744)
chr5 (261-358)||(2526282-2526379)
chr5 (284-356)||(53693-53765)
chr5 (258-356)||(27739351-27739449)
chr5 (257-354)||(8958502-8958599)
chr5 (259-356)||(37066560-37066657)
chr5 (259-356)||(41040137-41040234)
chr5 (258-356)||(7073275-7073373)
chr5 (258-356)||(21022632-21022730)
chr5 (258-356)||(33229204-33229302)
chr5 (258-356)||(39236896-39236994)
chr5 (284-323)||(40979452-40979491)
chr5 (261-323)||(10900165-10900227)
chr5 (258-356)||(19356501-19356599)
chr5 (261-323)||(19375409-19375471)
chr5 (1-49)||(32728860-32728908)
[»] chr4 (29 HSPs)
chr4 (117-434)||(24037950-24038267)
chr4 (117-434)||(39382846-39383163)
chr4 (117-433)||(49127588-49127904)
chr4 (117-433)||(18140375-18140690)
chr4 (170-435)||(31430977-31431242)
chr4 (197-434)||(24246540-24246777)
chr4 (1-121)||(24035806-24035926)
chr4 (1-121)||(24246918-24247038)
chr4 (1-121)||(39382624-39382744)
chr4 (1-121)||(49128029-49128149)
chr4 (1-121)||(51833974-51834094)
chr4 (1-121)||(56560879-56560997)
chr4 (235-387)||(51834225-51834378)
chr4 (21-121)||(52056607-52056705)
chr4 (258-356)||(53404111-53404209)
chr4 (258-356)||(45105807-45105904)
chr4 (258-356)||(52058252-52058350)
chr4 (258-351)||(30418397-30418490)
chr4 (260-356)||(22606362-22606458)
chr4 (288-358)||(28911579-28911649)
chr4 (258-356)||(38767791-38767889)
chr4 (258-355)||(53663635-53663732)
chr4 (260-356)||(28963870-28963966)
chr4 (261-323)||(16203097-16203159)
chr4 (261-323)||(39732843-39732905)
chr4 (261-323)||(50523874-50523936)
chr4 (284-356)||(49723784-49723855)
chr4 (261-323)||(5937846-5937908)
chr4 (284-349)||(26457118-26457183)
[»] chr7 (19 HSPs)
chr7 (139-435)||(25341355-25341651)
chr7 (201-435)||(31012375-31012609)
chr7 (1-121)||(25341182-25341302)
chr7 (1-121)||(31012201-31012321)
chr7 (5-121)||(41064854-41064970)
chr7 (248-379)||(41064585-41064717)
chr7 (1-113)||(12910305-12910415)
chr7 (258-356)||(25970433-25970531)
chr7 (261-358)||(39857075-39857172)
chr7 (258-357)||(37371078-37371177)
chr7 (258-356)||(14999868-14999966)
chr7 (258-356)||(30825190-30825288)
chr7 (258-354)||(26826384-26826480)
chr7 (258-356)||(25472765-25472863)
chr7 (1-48)||(47238758-47238805)
chr7 (258-356)||(12909229-12909327)
chr7 (258-356)||(43664814-43664912)
chr7 (39-90)||(40725766-40725817)
chr7 (261-323)||(19544572-19544634)
[»] chr6 (11 HSPs)
chr6 (135-434)||(30018773-30019072)
chr6 (1-121)||(30019591-30019711)
chr6 (1-121)||(31745922-31746043)
chr6 (1-121)||(21515297-21515415)
chr6 (248-385)||(31746179-31746317)
chr6 (261-358)||(4146810-4146907)
chr6 (258-356)||(21517357-21517455)
chr6 (284-323)||(30134180-30134219)
chr6 (258-356)||(365591-365689)
chr6 (261-323)||(20838498-20838560)
chr6 (261-323)||(27825057-27825119)
[»] scaffold0069 (1 HSPs)
scaffold0069 (288-356)||(16815-16883)
[»] scaffold0006 (1 HSPs)
scaffold0006 (258-355)||(91535-91634)
[»] scaffold0808 (1 HSPs)
scaffold0808 (258-356)||(4090-4188)
[»] scaffold0068 (1 HSPs)
scaffold0068 (260-356)||(37697-37791)


Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 117 - 435
Target Start/End: Original strand, 30984190 - 30984508
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30984190 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 30984289  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30984290 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 30984389  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30984390 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 30984489  T
Q  417 ccaaaccaaacagaggcta 435  Q
    |||||||||||||||||||    
T  30984490 ccaaaccaaacagaggcta 30984508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 149 - 434
Target Start/End: Complemental strand, 30210679 - 30210394
Alignment:
Q  149 attctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagggatggaattaatag 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  30210679 attctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttagaaaaattaatgaggacagggatggaattaatag 30210580  T
Q  249 aattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaa 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30210579 aattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaa 30210480  T
Q  349 accaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggct 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30210479 accaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggct 30210394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 196 - 435
Target Start/End: Original strand, 34774315 - 34774554
Alignment:
Q  196 ttcggttggagaagggtcagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaatt 295  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34774315 ttcggttggagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaatt 34774414  T
Q  296 gtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaa 395  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34774415 gtagcttcaactagaattgcttttggaggataaaaactattttaaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccaaaa 34774514  T
Q  396 ttgattatggctttgcaaaagccaaaccaaacagaggcta 435  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  34774515 ttgattctggctttgcaaaagccaaaccaaacagaggcta 34774554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 117 - 293
Target Start/End: Complemental strand, 189950 - 189774
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  189950 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 189851  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaa 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  189850 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagattctaggaa 189774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 117 - 293
Target Start/End: Complemental strand, 717554 - 717378
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  717554 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 717455  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaa 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  717454 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagattctaggaa 717378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 117 - 293
Target Start/End: Complemental strand, 878661 - 878485
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  878661 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 878562  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaa 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  878561 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagattctaggaa 878485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 30211075 - 30210955
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30211075 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 30210976  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  30210975 attatagtactaaaatattga 30210955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 30982815 - 30982935
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30982815 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 30982914  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  30982915 attatagtactaaaatattga 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 34774034 - 34774154
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34774034 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 34774133  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  34774134 attatagtactaaaatattga 34774154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 280 - 390
Target Start/End: Original strand, 629476 - 629586
Alignment:
Q  280 taagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgctt 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  629476 taagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgctt 629575  T
Q  380 ttgaaatgctc 390  Q
    |||||||||||    
T  629576 ttgaaatgctc 629586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 193877 - 193758
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  193877 ttacaatactaacatcatgaaaataaaa-ttacaaatagataatagaatttaaagtgcaatagagtattaaaatattatcacaaaactaacataatgtgt 193779  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  193778 attatagtactaaaatattga 193758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 721481 - 721362
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  721481 ttacaatactaacatcatgaaaataaaa-ttacaaatagataatagaatttaaagtgcaatagagtattaaaatattatcacaaaactaacataatgtgt 721383  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  721382 attatagtactaaaatattga 721362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 882588 - 882469
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  882588 ttacaatactaacatcatgaaaataaaa-ttacaaatagataatagaatttaaagtgcaatagagtattaaaatattatcacaaaactaacataatgtgt 882490  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  882489 attatagtactaaaatattga 882469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 44240611 - 44240493
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  44240611 ttacaatactaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 44240514  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  44240513 attatagtactaaaatattga 44240493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 35164381 - 35164474
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||| |||||||| | || |||||||||||||||||||  |||||||||||||||||||| ||||     |||||||||||||||||||    
T  35164381 tgtagaattgattcgaggaaagtcaaaaactaggaattgtagcttcaaggagaattgcttttggaggatagaagc-----tgaaaagccaaaccaaaca 35164474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 35802344 - 35802442
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||||||||  | |||||||||  |||||||||||  | |||||||||||||||||| |||| ||||| ||||| |||||||||||    
T  35802344 tgtagaattgattctaggaaagccaaaagctaggatatgtagcttcaaggataattgcttttggaggatagaagcaatttttaaaagtcaaaccaaaca 35802442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 924169 - 924099
Alignment:
Q  288 taggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    ||||||||||||||| |||||||||| ||||||||| ||| |||| ||||||||||| |||||||||||||    
T  924169 taggaattgtagctttaactagaattacttttggagtatagaagcaattttgaaaagtcaaaccaaacatg 924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 45276403 - 45276501
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||||  ||||||||||| ||||||||| ||  | |||||||||||||||||| || | ||||| ||||| ||||| |||||    
T  45276403 tgtagaattgattctagaaaagctagaagctaggatttgtagctttaaggataattgcttttggaggatataatcaatttttaaaagtcaaacaaaaca 45276501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 436
Target Start/End: Complemental strand, 308915 - 308870
Alignment:
Q  391 cagaattgattatggctttgcaaaagccaaaccaaacagaggctac 436  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  308915 cagaattgattctggctttgcaaaagccaaaccaaacagaggctac 308870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 8416760 - 8416662
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||||  ||||| ||||| ||||||||| ||  | |||||||||||||||||| || | ||| | |||||||||| ||||||    
T  8416760 tgtagaattgattctagaaaagctagaagttaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagccaaatcaaaca 8416662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 36821653 - 36821725
Alignment:
Q  284 aagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||| ||||||||| ||| ||  | |||||||||||||||||| |||| ||| |||||||||||||||||||    
T  36821653 aagcttggaattgtaactttaaggataattgcttttggaggatagaagcaattctgaaaagccaaaccaaaca 36821725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 3590169 - 3590107
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||| ||||||||||||||||||| ||||||| ||||||||    
T  3590169 agaattgattctagttaactcaaaagttaggaattgtagcttcaaccagaattgtttttggag 3590107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 31778752 - 31778710
Alignment:
Q  42 aatagaatttaaagtgcaatagagtattaaaatattattacaa 84  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||    
T  31778752 aatagaatttaaagttcaatatagtactaaaatattattacaa 31778710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 311; Significance: 1e-175; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 117 - 435
Target Start/End: Complemental strand, 40254661 - 40254343
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40254661 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 40254562  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40254561 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 40254462  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40254461 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 40254362  T
Q  417 ccaaaccaaacagaggcta 435  Q
    |||||||||||||||||||    
T  40254361 ccaaaccaaacagaggcta 40254343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 135 - 434
Target Start/End: Complemental strand, 14379959 - 14379660
Alignment:
Q  135 agaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagg 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14379959 agaaaataaatgttattctcttcaccaacatttattttaataagactgtagaaagaaaaaattcggttggagaagggttagaaaaattaatgagggcagg 14379860  T
Q  235 gatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagcta 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14379859 gatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagcta 14379760  T
Q  335 ttttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggct 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  14379759 ttttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctgactttgcaaaagccaaaccaaacggaggct 14379660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 219 - 435
Target Start/End: Complemental strand, 31786914 - 31786698
Alignment:
Q  219 aattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttt 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31786914 aattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttt 31786815  T
Q  319 tggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagcc 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31786814 tggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagcc 31786715  T
Q  419 aaaccaaacagaggcta 435  Q
    |||||||||||||||||    
T  31786714 aaaccaaacagaggcta 31786698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 218 - 434
Target Start/End: Complemental strand, 44282710 - 44282494
Alignment:
Q  218 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44282710 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 44282611  T
Q  318 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagc 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44282610 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagc 44282511  T
Q  418 caaaccaaacagaggct 434  Q
    |||||||||||||||||    
T  44282510 caaaccaaacagaggct 44282494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 214 - 425
Target Start/End: Original strand, 31686773 - 31686984
Alignment:
Q  214 agaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaatt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686773 agaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaatt 31686872  T
Q  314 gcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaa 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31686873 gcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaa 31686972  T
Q  414 aagccaaaccaa 425  Q
    ||||||||||||    
T  31686973 aagccaaaccaa 31686984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 14380598 - 14380478
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14380598 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 14380499  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  14380498 attatagtactaaaatattga 14380478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 31686525 - 31686645
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31686525 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 31686624  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  31686625 attatagtactaaaatattga 31686645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 31787141 - 31787021
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31787141 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 31787042  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  31787041 attatagtactaaaatattga 31787021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40255001 - 40254881
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40255001 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 40254902  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  40254901 attatagtactaaaatattga 40254881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 2443137 - 2443257
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  2443137 ttacaatactaacaacatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaatatattattacaaaactaatttaatgtgt 2443236  T
Q  101 attatagtactaaaatattga 121  Q
    || ||| ||||||||||||||    
T  2443237 atcataatactaaaatattga 2443257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 226 - 430
Target Start/End: Original strand, 2443663 - 2443868
Alignment:
Q  226 gagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggagga 325  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||| ||||  | ||||||||||||||||||| |   ||||||| ||||||||||    
T  2443663 gagggcagtgatggaattgatggaattgagggtgtagaattgattctagaaaaggcataagctaggaattgtagctttatggagaattgtttttggagga 2443762  T
Q  326 taaaagctattttgaaaagccaaaccaaacatgtt-aaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaacca 424  Q
    || |||| ||| |||||||||||||||||||| || |||| ||| ||||||||||||| |||| |  ||||||| ||   ||| | ||||||||||||||    
T  2443763 tagaagcaattctgaaaagccaaaccaaacatattgaaatgttgtagaattgcttttggaatgttgtagaattgtttccagctgtacaaaagccaaacca 2443862  T
Q  425 aacaga 430  Q
    ||||||    
T  2443863 aacaga 2443868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 13896470 - 13896370
Alignment:
Q  19 gaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgtattatagtactaaaatat 118  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||| |||  |||||||||||||||||  ||| ||||||||||||||||||||||    
T  13896470 gaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtactaa--tattattacaaaactaatttaaagtgtattatagtactaaaatat 13896373  T
Q  119 tga 121  Q
    |||    
T  13896372 tga 13896370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 14037087 - 14036987
Alignment:
Q  19 gaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgtattatagtactaaaatat 118  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||| |||  |||||||||||||||||  ||| ||||||||||||||||||||||    
T  14037087 gaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtactaa--tattattacaaaactaatttaaagtgtattatagtactaaaatat 14036990  T
Q  119 tga 121  Q
    |||    
T  14036989 tga 14036987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 37640761 - 37640859
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||||||||  | |||||| || ||||||||||||  | |||||||||||||||||| |||| ||| |  ||||||||||||||||    
T  37640761 tgtagaattgattctaggaaagccaaaagctaagatttgtagcttcaaggataattgcttttggaggatagaagcaattcttgaaagccaaaccaaaca 37640859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 37996816 - 37996718
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||| |||||||  | ||| ||||||||||||||| ||   ||||| ||||||||||||| |||| ||| |||||||||||||||||||    
T  37996816 tgtagaattgattcaaggaaagccaaaagttaggaattgtagctttaaggtgaattacttttggaggatagaagcaattatgaaaagccaaaccaaaca 37996718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 3739048 - 3739143
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaa 353  Q
    |||||||||||||||| |||||| | ||  ||||||||||||||| ||  | ||||||||||||| |||| |||| ||| ||||||||||||||||    
T  3739048 tgtagaattgattctaagaaagtcaaaaattaggaattgtagctttaaggaaaattgcttttggatgatagaagcaattatgaaaagccaaaccaa 3739143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 7473616 - 7473518
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||| ||||||  | ||| ||||| ||||||||||||  | ||||| |||||||||||| |||| ||| | |||| ||||||||||||    
T  7473616 tgtagaattgattcttggaaagccaaaagttaggatttgtagcttcaaggataattgtttttggaggatagaagcaattcttaaaaaccaaaccaaaca 7473518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 17480912 - 17480814
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||||  ||||||||||| ||||||||| ||  | ||||||||||| |||||| || | ||| | ||||||||||| |||||    
T  17480912 tgtagaattgattctagaaaagctagaagctaggatttgtagctttaaagataattgcttttgaaggatagaatcaattcttaaaagccaaactaaaca 17480814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 37551653 - 37551592
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttgga 322  Q
    ||||||||||||||  || | |||| |||||||||||||||||||| |||||||||||||||    
T  37551653 agaattgattctagttaactcagaaactaggaattgtagcttcaaccagaattgcttttgga 37551592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 14033470 - 14033372
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||| ||||| |||||||||||   | |||||||||||||||||| || | ||| | |||||||||||||||||    
T  14033470 tgtagaattgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaaca 14033372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 43342277 - 43342375
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||||  ||||||||| | ||||||||| ||  | |||||||||||||||||| || | ||| | |||| ||||| ||||||    
T  43342277 tgtagaattgattctagaaaagctagaagctagaatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaaaccaaatcaaaca 43342375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 13892850 - 13892752
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||| ||||| |||||||||||   | |||||||||||||||||| || | ||| | |||||||||| ||||||    
T  13892850 tgtagaattgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaatcaaaca 13892752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 14032975 - 14032877
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||| ||||| |||||||||||   | |||||||||||||||||| || | ||| | |||||||||| ||||||    
T  14032975 tgtagaattgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaatcaaaca 14032877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 35458185 - 35458283
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||||  ||||| ||||| |||||| || ||  | ||||||||||||| |||| || | ||| | ||||| |||||||||||    
T  35458185 tgtagaattgattctagaaaagctagaagttaggatttgtagttttaaggataattgcttttggatgatagaatcaattcttaaaagtcaaaccaaaca 35458283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 44002742 - 44002684
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctttt 319  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||    
T  44002742 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgctttt 44002684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 310; Significance: 1e-174; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 117 - 434
Target Start/End: Original strand, 51128903 - 51129220
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51128903 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 51129002  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51129003 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 51129102  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51129103 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 51129202  T
Q  417 ccaaaccaaacagaggct 434  Q
    ||||||||||||||||||    
T  51129203 ccaaaccaaacagaggct 51129220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 117 - 434
Target Start/End: Original strand, 47141290 - 47141607
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  47141290 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 47141389  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47141390 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaagaaagtaagaagctaggaattgtagcttcaactagaattgct 47141489  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  47141490 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaatg 47141589  T
Q  417 ccaaaccaaacagaggct 434  Q
    ||||||||||||||||||    
T  47141590 ccaaaccaaacagaggct 47141607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 117 - 435
Target Start/End: Complemental strand, 52692244 - 52691926
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52692244 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 52692145  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52692144 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgct 52692045  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52692044 tttggaggataaaatctatttttaaaagtcaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 52691945  T
Q  417 ccaaaccaaacagaggcta 435  Q
    |||||||||||||||||||    
T  52691944 ccaaaccaaacagaggcta 52691926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 139 - 435
Target Start/End: Complemental strand, 1527826 - 1527530
Alignment:
Q  139 aataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagggatg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  1527826 aataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttagaaaaattaatgagggcaggaatg 1527727  T
Q  239 gaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctatttt 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  1527726 gaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctttcggaggataaaagctagttt 1527627  T
Q  339 gaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggcta 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1527626 gaaaagtcaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggcta 1527530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 181 - 434
Target Start/End: Complemental strand, 38469321 - 38469068
Alignment:
Q  181 tgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagt 280  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38469321 tgcagaaagaaaaaattcggttggagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattataggaaagt 38469222  T
Q  281 aagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttt 380  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  38469221 aagaagctaagaattgtagcttcaactagaattgcttttggaggataaaaactattttgaaaaggtaaaccaaacatgttaaatattgcagaattgcttt 38469122  T
Q  381 tgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggct 434  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38469121 tgaaatgctccataattgattctggctttgcaaaagccaaaccaaacagaggct 38469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 214 - 435
Target Start/End: Complemental strand, 47697219 - 47696998
Alignment:
Q  214 agaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaatt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47697219 agaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaatt 47697120  T
Q  314 gcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaa 413  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  47697119 gcttttggaggataaaagctattttgaaaaggcaaaccaaacatgttaaatattgcagaattgcttttgaaatgcttcagaattgattctggctttgcaa 47697020  T
Q  414 aagccaaaccaaacagaggcta 435  Q
    ||||||||||||||||||||||    
T  47697019 aagccaaaccaaacagaggcta 47696998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 1527999 - 1527879
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1527999 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 1527900  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  1527899 attatagtactaaaatattga 1527879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 38469674 - 38469554
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38469674 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 38469575  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  38469574 attatagtactaaaatattga 38469554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 47140955 - 47141075
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47140955 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 47141054  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  47141055 attatagtactaaaatattga 47141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51124975 - 51125095
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51124975 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 51125074  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  51125075 attatagtactaaaatattga 51125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 52693033 - 52692913
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52693033 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 52692934  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  52692933 attatagtactaaaatattga 52692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 33025798 - 33025896
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||| ||||||||  | ||||||||||||||||||| ||  |||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  33025798 tgtagaattgattataggaaagccaaaagctaggaattgtagctttaaggagaattgcttttggaggatagaagcaattttgaaaagtcaaaccaaaca 33025896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 42074490 - 42074392
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||| || ||||| | ||||||||||||||||||| ||  ||||||| |||||||||||| |||| ||| |||||||||||||||||||    
T  42074490 tgtagaattgattcgagcaaagtcaaaagctaggaattgtagctttaaggagaattgtttttggaggatagaagcaattctgaaaagccaaaccaaaca 42074392  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 53687376 - 53687475
Alignment:
Q  257 gtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||| ||| ||||  | || |||||||||||||||| ||| |||||||||||||||||||| |||| ||| ||||||| |||||||||||    
T  53687376 gtgtagaattgattttagaaaagccaaaacctaggaattgtagctttaacaagaattgcttttggaggatagaagcaattatgaaaagtcaaaccaaaca 53687475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 51229825 - 51229727
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||||||||  | ||| ||||||||||||||| ||  ||||||  |||||||||||| |||| |||||||||||| ||||||||||    
T  51229825 tgtagaattgattctaggaaagccaaaagttaggaattgtagctttaaggagaattatttttggaggatagaagcaattttgaaaagctaaaccaaaca 51229727  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 51407533 - 51407464
Alignment:
Q  287 ctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||| ||| |||||||||||||||||||    
T  51407533 ctagaaattgtagcttcaaccaaaattgcttttggaggatagaagcaattctgaaaagccaaaccaaaca 51407464  T

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Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 48181167 - 48181071
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaa 354  Q
    ||||||||||||||||||||||  | |||||||||||||||| || ||  |||||||||||||||||||| |||| ||| | ||| | |||||||||    
T  48181167 tgtagaattgattctaggaaagccaaaagctaggaattgtagttttaaggagaattgcttttggaggatagaagcaattctaaaatgtcaaaccaaa 48181071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 11263787 - 11263709
Alignment:
Q  260 tagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctatttt 338  Q
    ||||||||||||||||||||  | ||||||||| ||||||||||||  | |||||||||||||||||| |||| |||||    
T  11263787 tagaattgattctaggaaagccaaaagctaggatttgtagcttcaaggataattgcttttggaggatagaagcaatttt 11263709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 42274616 - 42274518
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||||| |||||  | ||||||||||||||| ||| ||  |||||||||||||||||||| || | ||| | |||||||||| ||||||    
T  42274616 tgtagaattgattctatgaaagccaaaagctaggaattgtaactttaaggagaattgcttttggaggatagaatcaattctaaaaagccaaatcaaaca 42274518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 45150696 - 45150598
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||||||||||   | ||||||||| ||||||||||||  | ||||| |||||||||||| || | ||| | |||||||||||||||||    
T  45150696 tgtagaattgattctaggaaaaccaaaagctaggatttgtagcttcaaggataattgtttttggaggatagaaacaattcttaaaagccaaaccaaaca 45150598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 48254506 - 48254602
Alignment:
Q  260 tagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||| ||||  ||||||||||| ||||||||| ||  | |||||||||||||||||| || | ||| | ||||| |||||||||||    
T  48254506 tagaattgattctagaaaagctagaagctaggatttgtagctttaaggataattgcttttggaggatataatcaattcttaaaagtcaaaccaaaca 48254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 28182468 - 28182370
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||| ||||||||  | ||| |||||||| |||||| ||  | ||||||| |||||||||| |||| ||| | |||||||||||||||||    
T  28182468 tgtagaattgattataggaaagccaaaagttaggaattttagctttaaggataattgctgttggaggatagaagcaattctaaaaagccaaaccaaaca 28182370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 30809904 - 30809842
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  30809904 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 30809842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 31813499 - 31813401
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||||||||| |||||||||||   | |||||||||||||||||| || | ||| | ||||||||||| |||||    
T  31813499 tgtagaattgattctacaaaagccaaaagctaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaactaaaca 31813401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 44610827 - 44610889
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    |||||||||||||  ||| | | ||||||| ||||||||||||||| ||||||||||||||||    
T  44610827 agaattgattctaataaactcaaaagctagaaattgtagcttcaaccagaattgcttttggag 44610889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 44328754 - 44328692
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | | ||||||||||||||    
T  44328754 agaattgattctagttaactcaaaagctaggaattgtagcttcagccaaaattgcttttggag 44328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 310; Significance: 1e-174; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 117 - 434
Target Start/End: Complemental strand, 38843468 - 38843151
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38843468 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 38843369  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38843368 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 38843269  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38843268 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 38843169  T
Q  417 ccaaaccaaacagaggct 434  Q
    ||||||||||||||||||    
T  38843168 ccaaaccaaacagaggct 38843151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 117 - 435
Target Start/End: Original strand, 51488384 - 51488702
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51488384 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 51488483  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51488484 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 51488583  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51488584 tttggaggataaaagctattttgaaaagtcaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 51488683  T
Q  417 ccaaaccaaacagaggcta 435  Q
    |||||||||||||||||||    
T  51488684 ccaaaccaaacagaggcta 51488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 117 - 434
Target Start/End: Original strand, 50979124 - 50979441
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  50979124 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 50979223  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50979224 aaaattaatgaggtcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 50979323  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50979324 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 50979423  T
Q  417 ccaaaccaaacagaggct 434  Q
    ||||||||||||||||||    
T  50979424 ccaaaccaaacagaggct 50979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 117 - 435
Target Start/End: Original strand, 27000155 - 27000473
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27000155 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 27000254  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27000255 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 27000354  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27000355 tttggaggataaaaactattttgaaaagccaaaccaaatatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 27000454  T
Q  417 ccaaaccaaacagaggcta 435  Q
    |||||||||||||||||||    
T  27000455 ccaaaccaaacagaggcta 27000473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 134 - 434
Target Start/End: Original strand, 7593122 - 7593409
Alignment:
Q  134 cagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcag 233  Q
    |||||||||||||||||||||||||||||||||||||||            ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  7593122 cagaaaataaatgttattctcttcaccaacatttatttt------------gaaagaaaa-attcggttggagaagggttagaaaaattaatgagggcag 7593208  T
Q  234 ggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagct 333  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7593209 ggatggaattaatagaattgagggtggagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagct 7593308  T
Q  334 attttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggc 433  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7593309 attttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggc 7593408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 197 - 433
Target Start/End: Original strand, 5271472 - 5271708
Alignment:
Q  197 tcggttggagaagggtcagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattg 296  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5271472 tcggttggagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagttaggaattg 5271571  T
Q  297 tagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaat 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271572 tagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaat 5271671  T
Q  397 tgattatggctttgcaaaagccaaaccaaacagaggc 433  Q
    ||||| |||||||||||||||||||||||||||||||    
T  5271672 tgattctggctttgcaaaagccaaaccaaacagaggc 5271708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 217 - 434
Target Start/End: Complemental strand, 26821599 - 26821382
Alignment:
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26821599 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 26821500  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26821499 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 26821400  T
Q  417 ccaaaccaaacagaggct 434  Q
    ||||||||||||||||||    
T  26821399 ccaaaccaaacagaggct 26821382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 36496041 - 36496256
Alignment:
Q  218 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36496041 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 36496140  T
Q  318 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagc 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36496141 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagc 36496240  T
Q  418 caaaccaaacagaggc 433  Q
    ||||||||||||||||    
T  36496241 caaaccaaacagaggc 36496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 218 - 434
Target Start/End: Complemental strand, 38627754 - 38627538
Alignment:
Q  218 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 317  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627754 aaattaatgagggcagggatgaaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 38627655  T
Q  318 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagc 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38627654 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagc 38627555  T
Q  418 caaaccaaacagaggct 434  Q
    |||||||||||||||||    
T  38627554 caaaccaaacagaggct 38627538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 231 - 435
Target Start/End: Complemental strand, 15353431 - 15353227
Alignment:
Q  231 cagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaa 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353431 cagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaa 15353332  T
Q  331 gctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacaga 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15353331 gctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacaga 15353232  T
Q  431 ggcta 435  Q
    |||||    
T  15353231 ggcta 15353227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5271211 - 5271331
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5271211 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 5271310  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  5271311 attatagtactaaaatattga 5271331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26999996 - 27000116
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26999996 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 27000095  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  27000096 attatagtactaaaatattga 27000116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 38843808 - 38843688
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38843808 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 38843709  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  38843708 attatagtactaaaatattga 38843688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50978531 - 50978651
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50978531 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 50978630  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  50978631 attatagtactaaaatattga 50978651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51488080 - 51488200
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51488080 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 51488179  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  51488180 attatagtactaaaatattga 51488200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15353651 - 15353534
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15353651 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 15353552  T
Q  101 attatagtactaaaatat 118  Q
    ||||||||||||||||||    
T  15353551 attatagtactaaaatat 15353534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7592910 - 7593030
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7592910 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtacaatagagtattaaaatattattacaaaactaacataatgtgt 7593009  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  7593010 attatagtactaaaatattga 7593030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27576337 - 27576217
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||    
T  27576337 ttacaatactaacagtatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaattttattacaaaactaatttaatgtgt 27576238  T
Q  101 attatagtactaaaatattga 121  Q
    || ||||||||||||||||||    
T  27576237 atcatagtactaaaatattga 27576217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 248 - 430
Target Start/End: Complemental strand, 27576081 - 27575898
Alignment:
Q  248 gaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagcca 347  Q
    ||||||||||||||||||||||||||| ||||| ||||||||  ||||||| ||| |   |||||||||||||||||||| |||| ||| ||||||| ||    
T  27576081 gaattgagggtgtagaattgattctagaaaagtcagaagctaaaaattgtaactttatggagaattgcttttggaggatagaagcaattatgaaaagtca 27575982  T
Q  348 aaccaaacatgtt-aaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacaga 430  Q
    |||||||||| || |||| ||| ||||||||||||| |||| |  ||||||| || | ||| | ||||||||||||||||||||    
T  27575981 aaccaaacatattgaaatgttgtagaattgcttttggaatgttgtagaattgcttctagctgtacaaaagccaaaccaaacaga 27575898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 46407977 - 46407859
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  46407977 ttacaatactaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 46407880  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  46407879 attatagtactaaaatattga 46407859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35606819 - 35606701
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  35606819 ttacaatacaaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 35606722  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  35606721 attatagtactaaaatattga 35606701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 357
Target Start/End: Original strand, 47655888 - 47655987
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacat 357  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||| ||  | |||||||||||||||||| || | ||| | ||||||||||||||||||    
T  47655888 tgtagaattgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaacat 47655987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26821828 - 26821785
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataat 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  26821828 ttacaatactaacatcatgaaaataaaaattacaaatagataat 26821785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 11051192 - 11051262
Alignment:
Q  288 taggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    |||||||||||| |||||| | ||||| |||||||||||| |||| ||||||||||| |||||||||||||    
T  11051192 taggaattgtagattcaaccataattgtttttggaggatagaagcaattttgaaaagtcaaaccaaacatg 11051262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 1762313 - 1762251
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    |||||||||||||| ||| | | ||| ||||||||||||||||||| ||||||||||||||||    
T  1762313 agaattgattctagtaaacttaaaagttaggaattgtagcttcaaccagaattgcttttggag 1762251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 6706230 - 6706132
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||||  ||||||||||| ||||||||| ||  | ||||| |||||||||||| || | ||| | ||||||||||| |||||    
T  6706230 tgtagaattgattctagaaaagctagaagctaggatttgtagctttaaggataattgtttttggaggatagaatcaattcttaaaagccaaactaaaca 6706132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 13509940 - 13510038
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||||  ||||||||||| || |||||| ||  | |||||||||||||||||| || | ||| | |||||| ||||||||||    
T  13509940 tgtagaattgattctagaaaagctagaagctaggatttatagctttaaggataattgcttttggaggatagaatcaattcttaaaagctaaaccaaaca 13510038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 11829172 - 11829075
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    ||||||||||||||  || | | ||| |||||||| || ||||| | |||||||||||||||||||| |||| ||| | ||||| |||||||||||||    
T  11829172 agaattgattctagttaactcaaaagttaggaattataccttcatccagaattgcttttggaggatagaagcaattcttaaaaggcaaaccaaacatg 11829075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 46406519 - 46406421
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | |||||| || |||||||||||   | |||||||||||||||||| || | ||| | |||||||||||||||||    
T  46406519 tgtagaattgattctacaaaagccaaaagctaagatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaaca 46406421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 35604912 - 35604814
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||| | ||||||  | ||||||||||||  | ||||| |||||||||||| |||| ||| | ||||| |||| ||||||    
T  35604912 tgtagaattgattctacaaaagtcaaaagctaatatttgtagcttcaaggataattgtttttggaggatagaagcaattcttaaaagtcaaatcaaaca 35604814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 46033716 - 46033781
Alignment:
Q  293 attgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    |||||| ||||||  ||||||| ||||| |||||| |||| ||||||||||| |||| ||||||||    
T  46033716 attgtaacttcaatgagaattgtttttgaaggatagaagcaattttgaaaagtcaaatcaaacatg 46033781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 309; Significance: 1e-174; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 117 - 433
Target Start/End: Original strand, 29542330 - 29542646
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29542330 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 29542429  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29542430 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 29542529  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29542530 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 29542629  T
Q  417 ccaaaccaaacagaggc 433  Q
    |||||||||||||||||    
T  29542630 ccaaaccaaacagaggc 29542646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 139 - 435
Target Start/End: Original strand, 3260749 - 3261045
Alignment:
Q  139 aataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagggatg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3260749 aataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttagaaaaattaatgagggcagggatg 3260848  T
Q  239 gaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctatttt 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3260849 gaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctatttt 3260948  T
Q  339 gaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggcta 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3260949 gaaaagtcaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggcta 3261045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 134 - 434
Target Start/End: Complemental strand, 42663656 - 42663356
Alignment:
Q  134 cagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcag 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42663656 cagaaaataaatgttattctcttcaccaacatttattttaataagactgtagaaagaaaaaattcggttggagaagggttagaaaaattaatgagggcag 42663557  T
Q  234 ggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagct 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42663556 ggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagct 42663457  T
Q  334 attttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggc 433  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42663456 attttgaaaagtcaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggc 42663357  T
Q  434 t 434  Q
    |    
T  42663356 t 42663356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 218 - 434
Target Start/End: Complemental strand, 33115172 - 33114956
Alignment:
Q  218 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33115172 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 33115073  T
Q  318 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagc 417  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33115072 ttggaggataaaaactattttaaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagc 33114973  T
Q  418 caaaccaaacagaggct 434  Q
    |||||||||||||||||    
T  33114972 caaaccaaacagaggct 33114956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 218 - 433
Target Start/End: Complemental strand, 14083029 - 14082814
Alignment:
Q  218 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14083029 aaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctt 14082930  T
Q  318 ttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagc 417  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  14082929 ttggaggataaaagctattttaaaaagtcaaaccaaacatgttaaatattgtagaattgcttttgaaatgctccagaattgattctggctttgcaaaagc 14082830  T
Q  418 caaaccaaacagaggc 433  Q
    ||||||||||||||||    
T  14082829 caaaccaaacagaggc 14082814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 3260542 - 3260662
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3260542 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 3260641  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  3260642 attatagtactaaaatattga 3260662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 29542026 - 29542146
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29542026 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 29542125  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  29542126 attatagtactaaaatattga 29542146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 42663868 - 42663748
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42663868 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagattattaaaatattattacaaaactaacataatgtgt 42663769  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  42663768 attatagtactaaaatattga 42663748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 27738157 - 27738275
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  27738157 ttacaatactaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 27738254  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  27738255 attatagtactaaaatattga 27738275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33232946 - 33232828
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  33232946 ttacaatactaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 33232849  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  33232848 attatagtactaaaatattga 33232828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 7071626 - 7071744
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  7071626 ttacaatactaataccatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 7071723  T
Q  101 attatagtactaaaatattga 121  Q
    ||||| |||||||||||||||    
T  7071724 attatggtactaaaatattga 7071744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 2526379 - 2526282
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | |||||||||||||| || || |||| ||| |||||||||||||||||||||    
T  2526379 agaattgattctagttaactcaaaagctaggaattgtagcttcatccagaattgcttttggggggtagaagcaattctgaaaagccaaaccaaacatg 2526282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 53693 - 53765
Alignment:
Q  284 aagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||| ||| ||||||| |||||||||||    
T  53693 aagctaggaattgtagcttcaaccataattgcttttggaggatagaagcaattatgaaaaggcaaaccaaaca 53765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 27739351 - 27739449
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||||||||| |||||||||||   | |||||||||||||||||| |||| ||| | ||||| |||||||||||    
T  27739351 tgtagaattgattctacaaaagccaaaagctaggatttgtagcttcacggataattgcttttggaggatagaagcaattcttaaaagtcaaaccaaaca 27739449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 8958502 - 8958599
Alignment:
Q  257 gtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaa 354  Q
    |||||||||||||||||||||||  | ||  ||||||||||||||| ||  ||||||| |||| ||||||| || | ||| ||||||| |||||||||    
T  8958502 gtgtagaattgattctaggaaagccaaaaattaggaattgtagctttaaggagaattgtttttagaggatagaaacaattctgaaaagtcaaaccaaa 8958599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 356
Target Start/End: Original strand, 37066560 - 37066657
Alignment:
Q  259 gtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||||| ||||  ||||| ||||| ||||||||| ||  | |||||||||| ||||||| || | ||| | |||||||||||||||||    
T  37066560 gtagaattgattctagaaaagctagaagttaggatttgtagctttaatgataattgcttttagaggatataaccaattcttaaaagccaaaccaaaca 37066657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 356
Target Start/End: Original strand, 41040137 - 41040234
Alignment:
Q  259 gtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||| | ||||  | ||||||||| ||||||||||||  | ||||  |||||||||||| |||| ||| | |||||||||||||||||    
T  41040137 gtagaattgattcttgaaaagccaaaagctaggatttgtagcttcaaggataattatttttggaggatagaagcaattcttaaaagccaaaccaaaca 41040234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 7073275 - 7073373
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||||||||| ||||||||||||  | |||| |||||||   ||| |||| ||||| |||||||||||||||||    
T  7073275 tgtagaattgattctacaaaagccaaaagctaggatttgtagcttcaaggataattacttttgggaaatagaagcaatttttaaaagccaaaccaaaca 7073373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 21022632 - 21022730
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||||||||| |||||||||||   | ||||||||| |||||||| || | ||| | |||||||||||||||||    
T  21022632 tgtagaattgattctacaaaagccaaaagctaggatttgtagcttcatggataattgctttaggaggatagaatcaattcttaaaagccaaaccaaaca 21022730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 33229302 - 33229204
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||| ||||| |||||||||||   | |||||||||||||||||| || | ||| | |||||||||||||||||    
T  33229302 tgtagaattgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaaca 33229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 39236896 - 39236994
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||| | ||| ||||| |||||||||||   | ||||| |||||||||||| || | ||| | |||||||||||||||||    
T  39236896 tgtagaattgattctacaaaagtcaaaagttaggatttgtagcttcatggataattgtttttggaggatagaatcaattcttaaaagccaaaccaaaca 39236994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 40979491 - 40979452
Alignment:
Q  284 aagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  40979491 aagctaggaattgtagcttcatccagaattgcttttggag 40979452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 10900227 - 10900165
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||| ||||||||||||||||| | ||||||||||||||||    
T  10900227 agaattgattctagctaactcaaaagttaggaattgtagcttcatccagaattgcttttggag 10900165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 19356599 - 19356501
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| ||| | |||||| |||| |||||| || ||  | |||||||||| ||||||| || | | | | |||||||||||||||||    
T  19356599 tgtagaattgattctagaaaaattagaagcaaggatttgtagttttaaggataattgcttttagaggatagaatcaactcttaaaagccaaaccaaaca 19356501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 19375409 - 19375471
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||| ||||||||||||||||| | ||||||||||||||||    
T  19375409 agaattgattctagctaactcaaaagttaggaattgtagcttcatccagaattgcttttggag 19375471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32728860 - 32728908
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaat 49  Q
    |||||||||||| | || | |||||||| ||||||||||||||||||||    
T  32728860 ttacaatactaataccagggaaataaaagttacaaatagataatagaat 32728908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 306; Significance: 1e-172; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 117 - 434
Target Start/End: Original strand, 24037950 - 24038267
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24037950 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 24038049  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24038050 aaaattaatgaggacagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 24038149  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24038150 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 24038249  T
Q  417 ccaaaccaaacagaggct 434  Q
    ||||||||||||||||||    
T  24038250 ccaaaccaaacagaggct 24038267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 117 - 434
Target Start/End: Original strand, 39382846 - 39383163
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39382846 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 39382945  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39382946 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgct 39383045  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39383046 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 39383145  T
Q  417 ccaaaccaaacagaggct 434  Q
    ||||||||||||||||||    
T  39383146 ccaaaccaaacagaggct 39383163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 117 - 433
Target Start/End: Complemental strand, 49127904 - 49127588
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49127904 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttaga 49127805  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49127804 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactaaaattgct 49127705  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49127704 tttggaggataaaagctattttaaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 49127605  T
Q  417 ccaaaccaaacagaggc 433  Q
    |||||||||||||||||    
T  49127604 ccaaaccaaacagaggc 49127588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 117 - 433
Target Start/End: Complemental strand, 18140690 - 18140375
Alignment:
Q  117 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcaga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  18140690 attgagagttaagactgcagaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaa-ttcggttggagaagggttaga 18140592  T
Q  217 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgct 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18140591 aaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactaaaattgct 18140492  T
Q  317 tttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaag 416  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18140491 tttggaggataaaagctattttaaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaag 18140392  T
Q  417 ccaaaccaaacagaggc 433  Q
    |||||||||||||||||    
T  18140391 ccaaaccaaacagaggc 18140375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 170 - 435
Target Start/End: Original strand, 31430977 - 31431242
Alignment:
Q  170 tttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgat 269  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31430977 tttaataagactgcagaaagaaaaaattcggttggagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgat 31431076  T
Q  270 tctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31431077 tctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgc 31431176  T
Q  370 agaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggcta 435  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31431177 agaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggcta 31431242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 197 - 434
Target Start/End: Complemental strand, 24246777 - 24246540
Alignment:
Q  197 tcggttggagaagggtcagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattg 296  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24246777 tcggttggagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattg 24246678  T
Q  297 tagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaat 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24246677 tagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcataattgcttttgaaatgctccagaat 24246578  T
Q  397 tgattatggctttgcaaaagccaaaccaaacagaggct 434  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  24246577 tgattctggctttgcaaaagccaaaccaaacagaggct 24246540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24035806 - 24035926
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24035806 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 24035905  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  24035906 attatagtactaaaatattga 24035926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 24247038 - 24246918
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24247038 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 24246939  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  24246938 attatagtactaaaatattga 24246918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39382624 - 39382744
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39382624 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 39382723  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  39382724 attatagtactaaaatattga 39382744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 49128149 - 49128029
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49128149 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 49128050  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  49128049 attatagtactaaaatattga 49128029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 51833974 - 51834094
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||    
T  51833974 ttacaatattaacagcaagaaaataaaaattacaaatagataatagaatttaaagtgcaacagagtattaaaatataattacaaaactaatttaatgtgt 51834073  T
Q  101 attatagtactaaaatattga 121  Q
    || ||| ||||||||||||||    
T  51834074 atcataatactaaaatattga 51834094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 56560997 - 56560879
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  56560997 ttacaatactaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 56560900  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  56560899 attatagtactaaaatattga 56560879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 235 - 387
Target Start/End: Original strand, 51834225 - 51834378
Alignment:
Q  235 gatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagcta 334  Q
    ||||||||| || |||||||| ||||| |||||||||||| ||||  ||||| ||||||||||||||| |   |||||||||||||||||||| |||| |    
T  51834225 gatggaattgatggaattgagagtgtataattgattctagaaaagccagaagttaggaattgtagctttatggagaattgcttttggaggatagaagcaa 51834324  T
Q  335 ttttgaaaagccaaaccaaacatgtta-aatattgcagaattgcttttgaaatg 387  Q
    || ||||||| |||||||||||| ||| ||| ||| ||||||||||||| ||||    
T  51834325 ttctgaaaagtcaaaccaaacatattagaatgttgtagaattgcttttggaatg 51834378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 52056607 - 52056705
Alignment:
Q  21 aaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgtattatagtactaaaatattg 120  Q
    |||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||||||| ||| ||||||||||    
T  52056607 aaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgtattatggtattaaaatattg 52056704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 53404111 - 53404209
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||| ||||||||||||||||   | ||||||||||||||||||| ||  |||||||||||||||||||| |||||||  | |||||||||||||||||    
T  53404111 tgtaaaattgattctaggaaaaccaaaagctaggaattgtagctttaaggagaattgcttttggaggatagaagctatgcttaaaagccaaaccaaaca 53404209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 45105904 - 45105807
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| |||| || |||||| ||||| |||||| ||  |||||||||| ||||||||| |||| ||| |||||||||||||||||||    
T  45105904 tgtagaattgattctagaaaagcaa-aagctatgaattttagctttaagaagaattgcttctggaggatataagcaattctgaaaagccaaaccaaaca 45105807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 52058252 - 52058350
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||||||||| ||||||||||||  | |||||||||||||||||| |||| ||| | ||||| |||||||||||    
T  52058252 tgtagaattgattctacaaaagccaaaagctaggatttgtagcttcaaggataattgcttttggaggatagaagcaattcttaaaagtcaaaccaaaca 52058350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 30418397 - 30418490
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaacc 351  Q
    ||||||||||||||||||||||  | ||| ||||| ||||||||| ||  | |||||||||||||||||| || | ||||| ||||||||||||    
T  30418397 tgtagaattgattctaggaaagctaaaagttaggatttgtagcttgaaggataattgcttttggaggatagaatcaatttttaaaagccaaacc 30418490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 22606362 - 22606458
Alignment:
Q  260 tagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||| ||||||| | ||||||||| |||||||||||   | |||||||||||||||||| |||| ||| | |||||  ||||||||||    
T  22606362 tagaattgattcttggaaagtcaaaagctaggatttgtagcttcacgaataattgcttttggaggatagaagcaattcttaaaagttaaaccaaaca 22606458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 28911649 - 28911579
Alignment:
Q  288 taggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    ||||||||||||||||| | | ||||||||||||||| || |||| ||| ||| |||||||||||||||||    
T  28911649 taggaattgtagcttcatccacaattgcttttggagggtagaagcaattctgataagccaaaccaaacatg 28911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 38767889 - 38767791
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||| ||||||  | || |||||  ||||||||||||  | |||||||||||||||||| |||| ||| | ||||| |||||||||||    
T  38767889 tgtagaattgattcttggaaagccaaaaactaggctttgtagcttcaaggataattgcttttggaggatagaagcaattcttaaaagtcaaaccaaaca 38767791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 355
Target Start/End: Original strand, 53663635 - 53663732
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaac 355  Q
    ||||||||||||| ||||||||  | ||| ||||||||||||||| ||  | |||||||||||||||||| || | ||| | |||||||||| |||||    
T  53663635 tgtagaattgattataggaaagccaaaagttaggaattgtagctttaaggataattgcttttggaggatagaatcaattctaaaaagccaaatcaaac 53663732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 28963870 - 28963966
Alignment:
Q  260 tagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||| ||||  ||||| ||||| ||||||||| ||  | |||||||||||||||||| || | ||| | ||||| |||||||||||    
T  28963870 tagaattgattctagaaaagctagaagttaggatttgtagctttaagaataattgcttttggaggatataatcaattcttaaaagtcaaaccaaaca 28963966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 16203097 - 16203159
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||||||||||||||||||||||| | ||||||||||||||    
T  16203097 agaattgattctagtcaactcaaaagctaggaattgtagcttcaaccaaaattgcttttggag 16203159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 39732905 - 39732843
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  39732905 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 39732843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 50523874 - 50523936
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | ||||||||||||||||    
T  50523874 agaattgattctagctaactcaaaagctaggaattgtagcttcatccagaattgcttttggag 50523936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 49723855 - 49723784
Alignment:
Q  284 aagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||| |||||||||||| ||| |||||| ||||||||||||| || | ||| | |||||||||||||||||    
T  49723855 aagctaagaattgtagctttaacgagaatt-cttttggaggatagaaacaattcttaaaagccaaaccaaaca 49723784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 5937846 - 5937908
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | | ||||||||||||||    
T  5937846 agaattgattctagctaactcaaaagctaggaattgtagcttcatccataattgcttttggag 5937908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 26457183 - 26457118
Alignment:
Q  284 aagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaa 349  Q
    ||||||| ||||||||||||||    ||||| ||||||||||||||||| ||| ||||||| ||||    
T  26457183 aagctagaaattgtagcttcaatcgaaattgtttttggaggataaaagcaattctgaaaagtcaaa 26457118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 285; Significance: 1e-159; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 139 - 435
Target Start/End: Original strand, 25341355 - 25341651
Alignment:
Q  139 aataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagggatg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  25341355 aataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttagaaaaattaatgagggcaggaatg 25341454  T
Q  239 gaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctatttt 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25341455 gaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctatttt 25341554  T
Q  339 gaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggcta 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25341555 gaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggcta 25341651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 201 - 435
Target Start/End: Original strand, 31012375 - 31012609
Alignment:
Q  201 ttggagaagggtcagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012375 ttggagaagggttagaaaaattaatgagggcagggatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagc 31012474  T
Q  301 ttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgat 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012475 ttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgat 31012574  T
Q  401 tatggctttgcaaaagccaaaccaaacagaggcta 435  Q
    | |||||||||||||||||||||||||||||||||    
T  31012575 tctggctttgcaaaagccaaaccaaacagaggcta 31012609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 25341182 - 25341302
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25341182 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 25341281  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  25341282 attatagtactaaaatattga 25341302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 31012201 - 31012321
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012201 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 31012300  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  31012301 attatagtactaaaatattga 31012321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 41064970 - 41064854
Alignment:
Q  5 aatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgtatta 104  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |    
T  41064970 aatactaaaagcatgaaaataaaaattagaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaatttaatgtgtatca 41064871  T
Q  105 tagtactaaaatattga 121  Q
    |||||||||||||||||    
T  41064870 tagtactaaaatattga 41064854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 248 - 379
Target Start/End: Complemental strand, 41064717 - 41064585
Alignment:
Q  248 gaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagcca 347  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |   ||||||| |||||||||||| |||| ||| ||||||| ||    
T  41064717 gaattgagggtgtagaattgattctagaaaagtcagaagctaggaattgtagctttatggagaattgtttttggaggatagaagcaattatgaaaaggca 41064618  T
Q  348 aaccaaacatgtta-aatattgcagaattgctt 379  Q
    |||||||||| ||| ||| ||| ||||||||||    
T  41064617 aaccaaacatattagaatgttgtagaattgctt 41064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12910415 - 12910305
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  12910415 ttacaatactaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 12910318  T
Q  101 attatagtactaa 113  Q
    |||||||||||||    
T  12910317 attatagtactaa 12910305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 25970531 - 25970433
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||||||||||||||| |||||  | ||||||||||||||||||| ||  |||||| ||||||||||||| |||| ||| | |||||||||||||||||    
T  25970531 tgtagaattgattctaagaaagccaaaagctaggaattgtagctttaaagagaattacttttggaggatagaagcaattcttaaaagccaaaccaaaca 25970433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 39857172 - 39857075
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    ||||||||||||||  || | | |||||| |||||||||||||| | |||||| ||||||||||||| |||| ||| ||||||| |||||||||||||    
T  39857172 agaattgattctagttaactcaaaagctatgaattgtagcttcatccagaattacttttggaggatagaagcaattctgaaaagtcaaaccaaacatg 39857075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 357
Target Start/End: Complemental strand, 37371177 - 37371078
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacat 357  Q
    ||||||||||||||||| ||||  ||||| ||||| ||||||||| ||  | |||||||||||||||||| || | ||| | ||||||||||||||||||    
T  37371177 tgtagaattgattctagaaaagctagaagttaggatttgtagctttaaagataattgcttttggaggatagaaccaattcttaaaagccaaaccaaacat 37371078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 14999966 - 14999868
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||||||||  | ||  ||||||||||||||| ||  |||||| ||||||||||||| || | ||| | |||||||||||||||||    
T  14999966 tgtagaattgattctaggaaagccaaaaattaggaattgtagctttaaggagaattacttttggaggatagaatcaattctaaaaagccaaaccaaaca 14999868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 30825288 - 30825190
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||| ||||||  | ||||||||||||||| ||| ||  ||||||| |||||||||||| |||| ||| | ||||| |||||||||||    
T  30825288 tgtagaattgattcttggaaagccaaaagctaggaattgtaactttaaggagaattgtttttggaggatagaagcaattctaaaaaggcaaaccaaaca 30825190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 26826480 - 26826384
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaa 354  Q
    ||||||||||||| |||||||| || ||| ||||||||||| ||| ||  |||||| ||||||||||||| |||  ||| | |||||||||||||||    
T  26826480 tgtagaattgattataggaaaggaaaaagttaggaattgtacctttaaggagaattacttttggaggatagaagtaattcttaaaagccaaaccaaa 26826384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 25472765 - 25472863
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||| |||   |||||||| || ||||||||||||  | |||||||||||||||||| || | ||| | ||||| |||||||||||    
T  25472765 tgtagaattgattctagaaaatgtagaagctatgatttgtagcttcaaggataattgcttttggaggatagaatcaattcttaaaagtcaaaccaaaca 25472863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47238758 - 47238805
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaa 48  Q
    |||||||||||| | |||| ||||||||||||||||||||||||||||    
T  47238758 ttacaatactaataccatggaaataaaaattacaaatagataatagaa 47238805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 12909327 - 12909229
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||||||||| |||||||||||   | |||||||||||||||||| || | ||| | ||||| |||||||||||    
T  12909327 tgtagaattgattctacaaaagccaaaagctaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagtcaaaccaaaca 12909229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 43664814 - 43664912
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||||||||| | | | ||| ||||||||||| ||  | |||||||||||||||||| ||   ||| |||||||| ||| ||||||    
T  43664814 tgtagaattgattctaggaaagtcaaaggttagaaattgtagctttaagaaaaattgcttttggaggatagaatgaattctgaaaagctaaaacaaaca 43664912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 40725817 - 40725766
Alignment:
Q  39 gataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaa 90  Q
    |||||||||||||| |||| |||| |||| |||||||| |||||||||||||    
T  40725817 gataatagaatttatagtgtaatatagtactaaaatatcattacaaaactaa 40725766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 19544634 - 19544572
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    |||||||||||||| ||| | | |||||| |||||||||||||||| | |||| |||||||||    
T  19544634 agaattgattctagtaaactcaaaagctatgaattgtagcttcaaccataattacttttggag 19544572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 135 - 434
Target Start/End: Complemental strand, 30019072 - 30018773
Alignment:
Q  135 agaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggtcagaaaaattaatgagggcagg 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  30019072 agaaaataaatgttattctcttcaccaacatttattttaataagactgcagaaagaaaaaattcggttggagaagggttagaaaaattaatgaggacagg 30018973  T
Q  235 gatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagcta 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30018972 gatggaattaatagaattgagggtgtagaattgattctaggaaagtaagaagataggaattgtagcttcaactagaattgcttttggaggataaaagcta 30018873  T
Q  335 ttttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattatggctttgcaaaagccaaaccaaacagaggct 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30018872 ttttgaaaagccaaaccaaacatgttaaatattgcagaattgcttttgaaatgctccagaattgattctggctttgcaaaagccaaaccaaacagaggct 30018773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 30019711 - 30019591
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30019711 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 30019612  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  30019611 attatagtactaaaatattga 30019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 31745922 - 31746043
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattatta-caaaactaacataatgtg 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  31745922 ttacaatactaacagcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattaccaaaactaatttaatgtg 31746021  T
Q  100 tattatagtactaaaatattga 121  Q
    ||| ||||||||||||||||||    
T  31746022 tatcatagtactaaaatattga 31746043  T

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Target: chr6; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 21515297 - 21515415
Alignment:
Q  1 ttacaatactaacatcatgaaaataaaaattacaaatagataatagaatttaaagtgcaatagagtattaaaatattattacaaaactaacataatgtgt 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||  ||| ||||    
T  21515297 ttacaatactaatagcatgaaaataaaaattacaaatagataatagaatttaaattgcaacaaagtact--aatattattacaaaactaatttaaagtgt 21515394  T
Q  101 attatagtactaaaatattga 121  Q
    |||||||||||||||||||||    
T  21515395 attatagtactaaaatattga 21515415  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 248 - 385
Target Start/End: Original strand, 31746179 - 31746317
Alignment:
Q  248 gaattgagggtgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagcca 347  Q
    ||||||||| ||||||||||||||||| ||||  | ||| ||||||||||||||  |   |||||||||||||||||||| |||| ||||||||||| ||    
T  31746179 gaattgaggatgtagaattgattctagaaaagccataagttaggaattgtagctatatggagaattgcttttggaggatagaagcaattttgaaaagtca 31746278  T
Q  348 aaccaaacatgtt-aaatattgcagaattgcttttgaaa 385  Q
    |||||||||| ||  ||| ||| ||||||||||||||||    
T  31746279 aaccaaacatattggaatgttgtagaattgcttttgaaa 31746317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 4146907 - 4146810
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaacatg 358  Q
    ||||||||||||||  || | | ||||||||||||||||||||| | |||||||||||||| || || |||| ||| |||||||||||||||||||||    
T  4146907 agaattgattctagttaactcaaaagctaggaattgtagcttcatccagaattgcttttggggggtagaagcaattctgaaaagccaaaccaaacatg 4146810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 21517357 - 21517455
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||||  ||||  | ||||||||| |||||||||||   | |||||||||||||||||| || | ||| | ||||| |||||||||||    
T  21517357 tgtagaattgattctacaaaagccaaaagctaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagtcaaaccaaaca 21517455  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 30134219 - 30134180
Alignment:
Q  284 aagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  30134219 aagctagaaattgtagcttcaaccagaattgcttttggag 30134180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 365689 - 365591
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    |||| |||||| ||||| ||||| ||||| ||||| ||||||||| ||  | ||||||||||||| |||| || | ||| | ||||| |||||||||||    
T  365689 tgtaaaattgagtctagaaaagttagaagttaggatttgtagctttaaggataattgcttttggatgatagaatcaattcttaaaagtcaaaccaaaca 365591  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 20838498 - 20838560
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    |||||||||| ||| ||| | | ||| ||||| ||||||||||||| ||||||||||||||||    
T  20838498 agaattgattatagtaaactcaaaagttaggatttgtagcttcaaccagaattgcttttggag 20838560  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 27825119 - 27825057
Alignment:
Q  261 agaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggag 323  Q
    ||||||||||||||  || | | ||| ||||||||||||||||||| | ||||||||||||||    
T  27825119 agaattgattctagttaactgaaaagttaggaattgtagcttcaaccataattgcttttggag 27825057  T

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Target: scaffold0069 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 16883 - 16815
Alignment:
Q  288 taggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||| || ||||||||||||||||||||| || | ||| | |||||||||||||||||    
T  16883 taggaattgtagctttaattagaattgcttttggaggatagaatcaattctaaaaagccaaaccaaaca 16815  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 91634 - 91535
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaat--tgcttttggaggataaaagctattttgaaaagccaaaccaaac 355  Q
    |||||||||  ||||| |||||  | ||| ||||||||||||||| || ||||||  ||||||||||||||| || | ||| | ||||||||||||||||    
T  91634 tgtagaatttgttctatgaaagccaaaagttaggaattgtagctttaagtagaatattgcttttggaggatagaatcaattctaaaaagccaaaccaaac 91535  T

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Target: scaffold0808 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 4188 - 4090
Alignment:
Q  258 tgtagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||| ||| ||||  ||||||||||| || |||||| ||  | |||||||||| ||||||| || | ||| | ||||||||||| |||||    
T  4188 tgtagaattgattttagaaaagctagaagctaggatttttagctttaatgataattgcttttcgaggatagaatcaattcttaaaagccaaactaaaca 4090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 37791 - 37697
Alignment:
Q  260 tagaattgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagccaaaccaaaca 356  Q
    ||||||||||||||| ||||  ||||||||  | ||||||||| ||  | ||||| |||||||||||| || | ||| | |||||||||||||||||    
T  37791 tagaattgattctagaaaagctagaagcta--atttgtagcttaaaggataattgtttttggaggatagaatcaattcttaaaagccaaaccaaaca 37697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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