View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20009_low_19 (Length: 267)
Name: NF20009_low_19
Description: NF20009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20009_low_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 12 - 267
Target Start/End: Original strand, 42119985 - 42120245
Alignment:
| Q |
12 |
tcatcagaacgcgcaaaaaacagcgctacgctaaagtccttgagctcaaaaaccatgaaatcgaacaaatcaccagaatctcatagttcagtttcgtaat |
111 |
Q |
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| T |
42119985 |
tcatcagaacgcgcaaaaaacggcgctacgctaaagtccttaagctcaaaaaccatgaaatcgaacaaatcaccagaatctcatagttcagtttcgtaat |
42120084 |
T |
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| Q |
112 |
ccctgctaaaatggaatcaaaaccagtcctac-----caagtcaattcaacagaatctcaagcttcatattcgcttaaattaacaatcagtactaaaaca |
206 |
Q |
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| T |
42120085 |
ccctgctaaaatggaatcaaaaccagtcctaccaagtcaagtcaattcaacagaatctcaagcttcatattcgcttaaattaacaatcagtactaaaaca |
42120184 |
T |
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| Q |
207 |
gaatcaaaacgtagttctacctatgaaattgaacattatcaaccaaatttcataatcgagc |
267 |
Q |
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| T |
42120185 |
gaatcaaaacgtagttctacctatgaaattgaacattatcaaccaaatttcataatcgagc |
42120245 |
T |
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