View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20010_low_14 (Length: 287)
Name: NF20010_low_14
Description: NF20010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20010_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 40895326 - 40895571
Alignment:
| Q |
21 |
catgctacaatatcacctacttgatgttcagtgccgatcctaaagcttcagcacaaacttctttctagttctagtttgtaggtcagtagtatgaccccta |
120 |
Q |
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| T |
40895326 |
catgctacaatatcacctacttgatgttcagtgccgatcctaa-gcttcagcacaaacttctttctagttctagtttgtaggtcagtagtatgaccccta |
40895424 |
T |
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| Q |
121 |
tatatgtttatattaatcattgcagtatcttaatcctctaactaaaaataaaatggaaagtcaaacccttaaagaaaaagtgataaacttttattttcat |
220 |
Q |
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| T |
40895425 |
tatatgtttatattaatcattgcagtatcttaatcctctaactaaaaataaaatggaaagtcaaacccttaaagaaaaagtgataaacttttattttcat |
40895524 |
T |
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| Q |
221 |
agatctggggatacggtacaatacaagcaaaagttaatattccaagt |
267 |
Q |
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| T |
40895525 |
agatctggggatacggtacaatacaagcaaaagttaatattccaagt |
40895571 |
T |
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