View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20011_low_4 (Length: 594)

Name: NF20011_low_4
Description: NF20011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20011_low_4
NF20011_low_4
[»] chr7 (20 HSPs)
chr7 (121-469)||(26574804-26575155)
chr7 (1-61)||(17896719-17896779)
chr7 (1-61)||(8264934-8264994)
chr7 (1-61)||(12838274-12838334)
chr7 (1-61)||(18470294-18470354)
chr7 (1-61)||(31430546-31430606)
chr7 (1-61)||(33100029-33100089)
chr7 (1-63)||(20035033-20035095)
chr7 (1-63)||(20045444-20045506)
chr7 (1-63)||(42842062-42842124)
chr7 (1-63)||(43874278-43874340)
chr7 (1-58)||(2408857-2408914)
chr7 (8-61)||(47408125-47408178)
chr7 (1-61)||(30866932-30866992)
chr7 (30-61)||(32966274-32966305)
chr7 (1-65)||(33173790-33173854)
chr7 (30-69)||(33257860-33257899)
chr7 (30-61)||(35112416-35112447)
chr7 (1-59)||(41891258-41891317)
chr7 (1-58)||(10227246-10227303)
[»] chr3 (22 HSPs)
chr3 (1-63)||(43554375-43554437)
chr3 (1-61)||(53745480-53745540)
chr3 (30-70)||(13158669-13158709)
chr3 (1-61)||(790537-790597)
chr3 (1-61)||(20105179-20105239)
chr3 (1-61)||(41351394-41351454)
chr3 (1-63)||(19550231-19550293)
chr3 (1-71)||(33491338-33491408)
chr3 (1-63)||(40319127-40319189)
chr3 (1-58)||(27039805-27039862)
chr3 (1-58)||(54898285-54898342)
chr3 (1-61)||(7328442-7328502)
chr3 (1-61)||(17102741-17102801)
chr3 (1-61)||(41425616-41425676)
chr3 (1-61)||(45513814-45513874)
chr3 (1-61)||(47104354-47104414)
chr3 (30-61)||(48151972-48152003)
chr3 (30-61)||(48214054-48214085)
chr3 (30-61)||(52627466-52627497)
chr3 (1-57)||(54106254-54106310)
chr3 (30-63)||(39867076-39867109)
chr3 (30-63)||(55141701-55141734)
[»] chr8 (29 HSPs)
chr8 (1-61)||(9954636-9954696)
chr8 (1-61)||(14263531-14263591)
chr8 (1-61)||(16701086-16701146)
chr8 (1-61)||(23429896-23429956)
chr8 (1-61)||(23848749-23848809)
chr8 (1-63)||(2335418-2335480)
chr8 (1-63)||(13327764-13327826)
chr8 (1-61)||(18842517-18842577)
chr8 (1-61)||(38128733-38128793)
chr8 (1-61)||(39303709-39303769)
chr8 (1-63)||(7483729-7483791)
chr8 (1-63)||(11993878-11993940)
chr8 (1-61)||(2888661-2888721)
chr8 (1-61)||(8731020-8731080)
chr8 (30-61)||(12763422-12763453)
chr8 (1-61)||(15596331-15596391)
chr8 (1-61)||(17718490-17718550)
chr8 (1-61)||(27518900-27518960)
chr8 (1-61)||(33935253-33935313)
chr8 (1-61)||(34046838-34046898)
chr8 (5-61)||(43553440-43553496)
chr8 (1-58)||(6750605-6750662)
chr8 (1-58)||(6757396-6757453)
chr8 (1-58)||(13173919-13173976)
chr8 (31-59)||(14228545-14228573)
chr8 (8-61)||(25703777-25703830)
chr8 (8-61)||(25812948-25813001)
chr8 (1-58)||(35296034-35296091)
chr8 (33-61)||(43553027-43553055)
[»] chr6 (16 HSPs)
chr6 (1-61)||(3849052-3849112)
chr6 (1-61)||(9838316-9838376)
chr6 (1-61)||(17193145-17193205)
chr6 (1-61)||(17835880-17835940)
chr6 (1-61)||(23923907-23923967)
chr6 (1-63)||(24663364-24663426)
chr6 (30-62)||(364766-364798)
chr6 (1-58)||(19645866-19645923)
chr6 (1-61)||(373710-373770)
chr6 (1-61)||(1751625-1751685)
chr6 (1-61)||(22400758-22400818)
chr6 (1-61)||(23777283-23777343)
chr6 (1-61)||(24356248-24356308)
chr6 (1-61)||(30388708-30388768)
chr6 (1-59)||(8176425-8176483)
chr6 (1-63)||(34378844-34378906)
[»] chr5 (23 HSPs)
chr5 (1-61)||(4175670-4175730)
chr5 (1-63)||(6007850-6007912)
chr5 (1-63)||(38363158-38363220)
chr5 (1-61)||(1297928-1297988)
chr5 (1-61)||(7579858-7579918)
chr5 (5-61)||(10889288-10889344)
chr5 (2-58)||(26854285-26854341)
chr5 (1-61)||(38702110-38702170)
chr5 (1-61)||(42394318-42394378)
chr5 (1-60)||(18465671-18465730)
chr5 (1-58)||(28024449-28024506)
chr5 (1-58)||(32440102-32440159)
chr5 (30-61)||(1795336-1795367)
chr5 (1-61)||(12664827-12664887)
chr5 (1-57)||(18794756-18794812)
chr5 (1-61)||(21606448-21606508)
chr5 (30-61)||(25027943-25027974)
chr5 (1-61)||(28447174-28447234)
chr5 (30-61)||(28463604-28463635)
chr5 (30-61)||(38297836-38297867)
chr5 (1-61)||(38910243-38910303)
chr5 (31-61)||(3686363-3686393)
chr5 (1-58)||(40198760-40198817)
[»] chr4 (38 HSPs)
chr4 (1-61)||(3436261-3436321)
chr4 (1-61)||(56576297-56576357)
chr4 (1-58)||(9834257-9834314)
chr4 (1-61)||(12252090-12252150)
chr4 (1-61)||(13629387-13629447)
chr4 (1-61)||(19527402-19527462)
chr4 (1-61)||(27492349-27492409)
chr4 (1-61)||(31862180-31862240)
chr4 (5-61)||(38617505-38617561)
chr4 (1-61)||(44217696-44217756)
chr4 (1-61)||(46871911-46871971)
chr4 (1-61)||(52677339-52677399)
chr4 (1-61)||(53599980-53600040)
chr4 (2-61)||(31984296-31984355)
chr4 (1-63)||(16464976-16465038)
chr4 (1-58)||(21044941-21044998)
chr4 (1-58)||(36750170-36750227)
chr4 (1-61)||(4201512-4201572)
chr4 (30-61)||(16664231-16664262)
chr4 (1-61)||(22828595-22828655)
chr4 (1-61)||(23623689-23623749)
chr4 (1-61)||(23719978-23720038)
chr4 (1-57)||(29295348-29295404)
chr4 (1-61)||(32239390-32239450)
chr4 (30-61)||(36408713-36408744)
chr4 (30-61)||(36422879-36422910)
chr4 (30-61)||(37502011-37502042)
chr4 (30-61)||(42513249-42513280)
chr4 (1-61)||(44014107-44014167)
chr4 (1-61)||(44069021-44069081)
chr4 (30-61)||(47751527-47751558)
chr4 (1-61)||(48782190-48782250)
chr4 (30-63)||(39923775-39923808)
chr4 (30-63)||(53125461-53125494)
chr4 (1-63)||(55935095-55935157)
chr4 (4-61)||(23237400-23237457)
chr4 (1-54)||(26620545-26620598)
chr4 (4-61)||(33809077-33809134)
[»] chr2 (19 HSPs)
chr2 (1-61)||(10812186-10812246)
chr2 (1-61)||(14295953-14296013)
chr2 (1-61)||(26342567-26342627)
chr2 (1-61)||(37093437-37093497)
chr2 (1-62)||(2012847-2012908)
chr2 (1-61)||(28145768-28145828)
chr2 (1-61)||(34357165-34357225)
chr2 (1-61)||(41885612-41885672)
chr2 (1-61)||(479169-479230)
chr2 (1-58)||(35158547-35158604)
chr2 (5-61)||(14288418-14288474)
chr2 (1-61)||(19594338-19594398)
chr2 (1-61)||(25558379-25558439)
chr2 (30-61)||(32674198-32674229)
chr2 (30-61)||(34399189-34399220)
chr2 (30-65)||(38072451-38072486)
chr2 (1-60)||(36375559-36375618)
chr2 (1-59)||(13753944-13754002)
chr2 (30-59)||(30264827-30264856)
[»] chr1 (24 HSPs)
chr1 (1-61)||(35531485-35531545)
chr1 (1-61)||(45226767-45226827)
chr1 (1-58)||(13507760-13507817)
chr1 (1-58)||(13514948-13515005)
chr1 (1-58)||(30686401-30686458)
chr1 (1-57)||(7782942-7782998)
chr1 (1-61)||(8464639-8464699)
chr1 (1-61)||(15660574-15660634)
chr1 (1-61)||(19093255-19093315)
chr1 (1-65)||(35483969-35484033)
chr1 (1-63)||(18034016-18034078)
chr1 (1-61)||(1429271-1429331)
chr1 (30-61)||(1677203-1677234)
chr1 (1-61)||(9361960-9362020)
chr1 (1-61)||(21927886-21927946)
chr1 (30-61)||(28679008-28679039)
chr1 (1-61)||(31570827-31570887)
chr1 (30-61)||(32347965-32347996)
chr1 (30-61)||(37609520-37609551)
chr1 (1-60)||(1038071-1038130)
chr1 (1-60)||(1044977-1045036)
chr1 (3-61)||(44182747-44182805)
chr1 (1-58)||(40926933-40926990)
chr1 (1-58)||(43500496-43500553)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-63)||(49132-49194)
[»] scaffold0002 (1 HSPs)
scaffold0002 (30-70)||(148279-148319)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-61)||(14915-14975)
[»] scaffold0172 (1 HSPs)
scaffold0172 (30-61)||(26350-26381)
[»] scaffold0018 (1 HSPs)
scaffold0018 (30-61)||(184350-184381)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-61)||(195932-195992)
[»] scaffold0001 (1 HSPs)
scaffold0001 (30-61)||(419857-419888)


Alignment Details
Target: chr7 (Bit Score: 108; Significance: 6e-54; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 121 - 469
Target Start/End: Original strand, 26574804 - 26575155
Alignment:
Q  121 tttacgtattctaagtattttaaagggtgattg---tttgtttttgttttactttattaacttcaaaaggtgtctatgctttttgtattacacattcaga 217  Q
    |||| |||||||| |||||||||||||||||||   |||||||||||  ||||| |||||||||||||||||||||| |||||| ||||||||||||| |    
T  26574804 tttatgtattctatgtattttaaagggtgattgctctttgtttttgtaatacttcattaacttcaaaaggtgtctatactttttatattacacattcaaa 26574903  T
Q  218 agggagttcatttccttgcttttggcctctattgtgcgggaattttaatgcaatagtagcaaacaaagcatgctatctattgtaagatgattttagagat 317  Q
    |||||||| ||||| ||| || |||||||||||||||||||||||||||| ||| ||       || | ||| ||| |||||||  |||||||||||| |    
T  26574904 agggagtttatttcgttgattctggcctctattgtgcgggaattttaatgtaattgt------taaggtatgttatgtattgtacaatgattttagagtt 26574997  T
Q  318 gc----tctacacgtcttgttctagttcgttctttatcaataaaagtttgctt-gnnnnnnnncttcagaaggtgc-aaaatataagaaataagggtggt 411  Q
    ||    | ||||| ||||||||||||| | |||||||||||||||||||| ||          ||| | ||||||| |||||| ||||||| ||| ||||    
T  26574998 gctatatatacacatcttgttctagtttgctctttatcaataaaagtttgattataaaaaaaacttgaaaaggtgctaaaataaaagaaatgaggttggt 26575097  T
Q  412 taaaagaaaatattctatgcattttttatgttgaatctttacatcctccttgtgggac 469  Q
    ||||||||||||| | |||||||||| ||||||||| |||||||| ||||| ||||||    
T  26575098 taaaagaaaatatacaatgcatttttaatgttgaatttttacatcttccttttgggac 26575155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17896719 - 17896779
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  17896719 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 17896779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8264994 - 8264934
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||    
T  8264994 aaagtgacagttaaataggaacaaaaattttctctaaaagtgacacttaaaaaggaacgga 8264934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12838274 - 12838334
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||||||    
T  12838274 aaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 12838334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18470354 - 18470294
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||    
T  18470354 aaagtgacagttaaataagaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 18470294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31430606 - 31430546
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  31430606 aaagtgacagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacgga 31430546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33100029 - 33100089
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  33100029 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaagaacgga 33100089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20035095 - 20035033
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||| |||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  20035095 aaagtgccagttaaataggaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggatg 20035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20045506 - 20045444
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||| |||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  20045506 aaagtgccagttaaataggaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggatg 20045444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42842062 - 42842124
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||       ||||| |||||||||| |||||||||||||||||    
T  42842062 aaagtgacagttaaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggatg 42842124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43874278 - 43874340
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||       ||||| ||||||||||||||||||| ||||||||    
T  43874278 aaagtgacagttaaataggaacaaaaaaattctctaaaagtgacacttaaaaagaaacggatg 43874340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2408857 - 2408914
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||| ||||       |||||||||||||||||||||||||||||    
T  2408857 aaagtgacagttaaataagaacaaattttttctccaaaagtgacacttaaaaaggaac 2408914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 47408178 - 47408125
Alignment:
Q  8 cagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||    
T  47408178 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 47408125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30866932 - 30866992
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||| ||||||||||||| |||||||    
T  30866932 aaagtgacagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaagaacgga 30866992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 32966274 - 32966305
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  32966274 ttctccaaaagtgacacttaaaaaggaacgga 32966305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33173854 - 33173790
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatgaa 65  Q
    ||||||||||||||||||||||       |||| |||||| ||||||||||||||||| ||||||    
T  33173854 aaagtgacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacagatgaa 33173790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 33257899 - 33257860
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatgaaatag 69  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  33257899 ttctccaaaagtgacacttaaaaaggaactgaggaaatag 33257860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 35112447 - 35112416
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  35112447 ttctccaaaagtgacacttaaaaaggaacgga 35112416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41891317 - 41891258
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnntt-ctccaaaagtgacacttaaaaaggaacg 59  Q
    ||||||||||||||||||||||       || ||||||||||||||||||||||||||||    
T  41891317 aaagtgacagttaaataggaacaaatttttttctccaaaagtgacacttaaaaaggaacg 41891258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10227303 - 10227246
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||| |||||| |||||||||||||||||    
T  10227303 aaagtgacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaac 10227246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43554437 - 43554375
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  43554437 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggatg 43554375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53745480 - 53745540
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  53745480 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 53745540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 13158669 - 13158709
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatgaaataga 70  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  13158669 ttcttcaaaagtgacacttaaaaaggaacggatgaaataga 13158709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 790597 - 790537
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||||||    
T  790597 aaagtgacagttaaatagaaacataaattttctccaaaagtgacacttaaaaaggaacgga 790537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20105239 - 20105179
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||    
T  20105239 aaagtgacagttaaagaggaacaaaaattttctccaaaagtgacacttaaaaaggaacgga 20105179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41351394 - 41351454
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  41351394 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaagaacgga 41351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19550293 - 19550231
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||       |||||||||||| ||| |||||||||||||||||    
T  19550293 aaagtgacagttaaataggaacaaaaaatttctccaaaagtaacatttaaaaaggaacggatg 19550231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33491338 - 33491408
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatgaaatagaa 71  Q
    ||||| ||||||||||||||||       |||| |||||| |||||||||||||||||||||||| |||||    
T  33491338 aaagtaacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggatgaagtagaa 33491408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40319127 - 40319189
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||| ||||||||||||       ||||||||||| ||||||||||||||||||||||    
T  40319127 aaagtgacacttaaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacggatg 40319189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27039805 - 27039862
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||| ||||||||||||||||||||||    
T  27039805 aaagtgacagttaaataggaacaaaaattttctcctaaagtgacacttaaaaaggaac 27039862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54898285 - 54898342
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||| ||||||||||||||       |||||||||||||||||||||||||||||    
T  54898285 aaagtgatagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaac 54898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7328502 - 7328442
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||| ||||||||||||||       ||||||||||| ||||||||||||||||||||    
T  7328502 aaagtgatagttaaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacgga 7328442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17102801 - 17102741
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||| |||||||    
T  17102801 aaagtgacagttaaataggaacaaaaaatttctccaaaagagacacttaaaaaagaacgga 17102741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41425676 - 41425616
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||| ||||||||||||       ||||||||||| ||||||||||||||||||||    
T  41425676 aaagtgacacttaaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacgga 41425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45513814 - 45513874
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||||| ||||||||||| |||||||    
T  45513814 aaagtgacagttaaataggaacaaaaaatttctccaaaagtaacacttaaaaaagaacgga 45513874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47104354 - 47104414
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||| |||||||||| |||||||||||||||    
T  47104354 aaagtgacagttaaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacgga 47104414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 48152003 - 48151972
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  48152003 ttctccaaaagtgacacttaaaaaggaacgga 48151972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 48214085 - 48214054
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  48214085 ttctccaaaagtgacacttaaaaaggaacgga 48214054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 52627466 - 52627497
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  52627466 ttctccaaaagtgacacttaaaaaggaacgga 52627497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 54106310 - 54106254
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaa 57  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||    
T  54106310 aaagtgacagttaaataggaacaaaatttttcttcaaaagtgacacttaaaaaggaa 54106254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 39867076 - 39867109
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||| ||||||||||||||||||||||    
T  39867076 ttctccaaaagagacacttaaaaaggaacggatg 39867109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 55141701 - 55141734
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||||| ||||||||    
T  55141701 ttctccaaaagtgacacttaaaaagaaacggatg 55141734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9954696 - 9954636
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  9954696 aaagtgacagttaaataggaactaaatttttctccaaaagtgacacttaaaaaggaacgga 9954636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14263591 - 14263531
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  14263591 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacgga 14263531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16701086 - 16701146
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  16701086 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 16701146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23429956 - 23429896
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  23429956 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacgga 23429896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23848749 - 23848809
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  23848749 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 23848809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2335480 - 2335418
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||    
T  2335480 aaagtgacagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggatg 2335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13327826 - 13327764
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||    
T  13327826 aaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacggatg 13327764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18842577 - 18842517
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||    
T  18842577 aaagtgacacttaaataggaacaaaaaaattctccaaaagtgacacttaaaaaggaacgga 18842517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38128733 - 38128793
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||||||    
T  38128733 aaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 38128793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39303709 - 39303769
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||    
T  39303709 aaagtgacagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacgga 39303769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7483791 - 7483729
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||| ||||||||||       |||||||||| |||||||||||||||||||||||    
T  7483791 aaagtgacagtgaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggatg 7483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11993940 - 11993878
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||| |||       |||||||||||||||||||||||||||| |||||    
T  11993940 aaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaatggatg 11993878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2888661 - 2888721
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||| ||||||||||||       ||||||||||| ||||||||||||||||||||    
T  2888661 aaagtgacacttaaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacgga 2888721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8731020 - 8731080
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||| ||||||||| |||||||||||    
T  8731020 aaagtgacagttaaataggaacaaaaaatttctccaaaaatgacacttagaaaggaacgga 8731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 12763453 - 12763422
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  12763453 ttctccaaaagtgacacttaaaaaggaacgga 12763422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15596391 - 15596331
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||| ||||||||||||||||||||    
T  15596391 aaagtgacagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacgga 15596331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17718550 - 17718490
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       || ||||||||||||| |||||||||||||||    
T  17718550 aaagtgacagttaaataggaacaaaaaatttatccaaaagtgacaattaaaaaggaacgga 17718490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27518900 - 27518960
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| |||||| ||||||||||||||||||||    
T  27518900 aaagtgacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacgga 27518960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33935253 - 33935313
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| ||||||| |||||||||||||||||||    
T  33935253 aaagtgacagttaaataggaacaaaaattttcttcaaaagtaacacttaaaaaggaacgga 33935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34046898 - 34046838
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||| ||||||||||||||||||||||||||    
T  34046898 aaagtgacagttaaatagaaacaaaaaatttctctaaaagtgacacttaaaaaggaacgga 34046838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 43553440 - 43553496
Alignment:
Q  5 tgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||       ||||||||||| ||||||||||||||||||||    
T  43553440 tgacagttaaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacgga 43553496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6750662 - 6750605
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||||||| ||||| ||||||||||||    
T  6750662 aaagtgacagttaaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaac 6750605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6757453 - 6757396
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||||||| ||||| ||||||||||||    
T  6757453 aaagtgacagttaaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaac 6757396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13173976 - 13173919
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||  ||||||||||||||||||||||    
T  13173976 aaagtgacagttaaataggaacaaaaactttctcttaaagtgacacttaaaaaggaac 13173919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 14228545 - 14228573
Alignment:
Q  31 tctccaaaagtgacacttaaaaaggaacg 59  Q
    |||||||||||||||||||||||||||||    
T  14228545 tctccaaaagtgacacttaaaaaggaacg 14228573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 25703777 - 25703830
Alignment:
Q  8 cagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||       |||| |||||||||||||||||||||||||||    
T  25703777 cagttaaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacgga 25703830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 25812948 - 25813001
Alignment:
Q  8 cagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||       |||| |||||||||||||||||||||||||||    
T  25812948 cagttaaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacgga 25813001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35296091 - 35296034
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||| | ||||||||||||||||||||||    
T  35296091 aaagtgacagttaaataggaacaaaaaatttctactaaagtgacacttaaaaaggaac 35296034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 43553055 - 43553027
Alignment:
Q  33 tccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||||||||||||||    
T  43553055 tccaaaagtgacacttaaaaaggaacgga 43553027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3849112 - 3849052
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  3849112 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 3849052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9838316 - 9838376
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||| |||||       ||||||||||||||||||||||||||||||||    
T  9838316 aaagtgacagttaaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 9838376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17193205 - 17193145
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||    
T  17193205 aaagtgacatttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 17193145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17835940 - 17835880
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||| ||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  17835940 aaagtaacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 17835880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23923907 - 23923967
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  23923907 aaagtgacagttaaataggaacaaaaaatctctccaaaagtgacacttaaaaaggaacgga 23923967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24663426 - 24663364
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  24663426 aaagtgacagttaaataggaataaaaattttctccaaaagtgatacttaaaaaggaacggatg 24663364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 364766 - 364798
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggat 62  Q
    |||||||||||||||||||||||||||||||||    
T  364766 ttctccaaaagtgacacttaaaaaggaacggat 364798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19645866 - 19645923
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    |||||||||||||||||| |||       |||||||||||||||||||||||||||||    
T  19645866 aaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaac 19645923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 373770 - 373710
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||| ||||       |||||||||||||||||||||||| |||||||    
T  373770 aaagtgacagttaaatatgaacaaaaaatttctccaaaagtgacacttaaaaatgaacgga 373710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1751625 - 1751685
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||| ||||||||||||||       |||| |||||||||||||||||||||||||||    
T  1751625 aaagtgaaagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacgga 1751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22400758 - 22400818
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||| ||||       ||||||||||| ||||||||||||||||||||    
T  22400758 aaagtgacagttaaataagaacaaaaaatttctccaaaagagacacttaaaaaggaacgga 22400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23777343 - 23777283
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||| ||||||||||||||       |||||||||| |||||||||||||||||||||    
T  23777343 aaagtgatagttaaataggaacaaaaaatttctccaaaattgacacttaaaaaggaacgga 23777283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24356248 - 24356308
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||| |||||||||| |||||||||||||||    
T  24356248 aaagtgacagttaaataggaacaataaatttctctaaaagtgacaattaaaaaggaacgga 24356308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30388768 - 30388708
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||| |||||||       |||| |||||||||||||||||||||||||||    
T  30388768 aaagtgacagttaattaggaacaaaaattttcttcaaaagtgacacttaaaaaggaacgga 30388708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8176483 - 8176425
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacg 59  Q
    ||||||||||||||||||||||       |||| |||||| ||||||||||||||||||    
T  8176483 aaagtgacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacg 8176425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34378906 - 34378844
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||| |||       || ||||||| |||||||||||||||||||||||    
T  34378906 aaagtgacagttaaatagaaacaaattttttttccaaaaatgacacttaaaaaggaacggatg 34378844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4175670 - 4175730
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  4175670 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacgga 4175730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6007912 - 6007850
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||    
T  6007912 aaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggatg 6007850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38363220 - 38363158
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||    
T  38363220 aaagtgacagttaaataggaacaaaaattttctccaaaagtaacacttaaaaaggaacggatg 38363158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1297928 - 1297988
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  1297928 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaagaacgga 1297988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7579858 - 7579918
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||||||    
T  7579858 aaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 7579918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10889288 - 10889344
Alignment:
Q  5 tgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  10889288 tgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacgga 10889344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 26854285 - 26854341
Alignment:
Q  2 aagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  26854285 aagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaac 26854341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38702170 - 38702110
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||    
T  38702170 aaagtgacagttaaataggaacaaaaaatttctccaaaattgacacttaaaaaggaacgga 38702110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42394318 - 42394378
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  42394318 aaagtgacagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacgga 42394378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18465730 - 18465671
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgg 60  Q
    |||||| |||||||||||||||       |||||||||||||||||||||||||||||||    
T  18465730 aaagtggcagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacgg 18465671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28024449 - 28024506
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       ||||||||||| |||||||||||||||||    
T  28024449 aaagtgacagttaaataggaacaaaatttttctccaaaagagacacttaaaaaggaac 28024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32440102 - 32440159
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||| ||||||||||||||||||||||    
T  32440102 aaagtgacagttaaataggaacaaaaattttctcctaaagtgacacttaaaaaggaac 32440159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 1795336 - 1795367
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  1795336 ttctccaaaagtgacacttaaaaaggaacgga 1795367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12664887 - 12664827
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||||| |||||||||||| ||||||    
T  12664887 aaagtgacagttaaataggaacaaaaattttctccaaaagtaacacttaaaaagaaacgga 12664827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18794812 - 18794756
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaa 57  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||    
T  18794812 aaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaa 18794756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21606448 - 21606508
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||| |||| |||||||||||||||    
T  21606448 aaagtgacagttaaataggaacaaaaaatttctccaaaagagacatttaaaaaggaacgga 21606508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 25027943 - 25027974
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  25027943 ttctccaaaagtgacacttaaaaaggaacgga 25027974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28447174 - 28447234
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||| ||||||||||||||       ||||||||||| ||||||||||||||||||||    
T  28447174 aaagtgagagttaaataggaacaaaaattttctccaaaagagacacttaaaaaggaacgga 28447234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 28463604 - 28463635
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  28463604 ttctccaaaagtgacacttaaaaaggaacgga 28463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 38297836 - 38297867
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  38297836 ttctccaaaagtgacacttaaaaaggaacgga 38297867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38910303 - 38910243
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       |||||||||||||||||||||||| |||||||    
T  38910303 aaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaagaacgga 38910243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 3686393 - 3686363
Alignment:
Q  31 tctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||||||||||||||||    
T  3686393 tctccaaaagtgacacttaaaaaggaacgga 3686363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40198817 - 40198760
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    |||||||||||||||||| |||       ||||||||||| |||||||||||||||||    
T  40198817 aaagtgacagttaaatagtaacaaaaaatttctccaaaagagacacttaaaaaggaac 40198760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3436261 - 3436321
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  3436261 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 3436321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 56576297 - 56576357
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  56576297 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 56576357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9834314 - 9834257
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  9834314 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaac 9834257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12252150 - 12252090
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  12252150 aaagtgacagttaaataggaacaaaaattttcttcaaaagtgacacttaaaaaggaacgga 12252090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13629387 - 13629447
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  13629387 aaagtgacagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacgga 13629447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19527402 - 19527462
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||| ||||||    
T  19527402 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacgga 19527462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27492409 - 27492349
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||| ||||||    
T  27492409 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacgga 27492349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31862180 - 31862240
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||    
T  31862180 aaagtgacagttaaataggaacaaaaattttctccaaaagagacacttaaaaaggaacgga 31862240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 38617505 - 38617561
Alignment:
Q  5 tgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  38617505 tgacagttaaataggaacaaaatatttctccaaaagtgacacttaaaaaggaacgga 38617561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44217756 - 44217696
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||||||||||    
T  44217756 aaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 44217696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46871971 - 46871911
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       || |||||||||||||||||||||||||||||    
T  46871971 aaagtgacagttaaataggaacaaaaaatttatccaaaagtgacacttaaaaaggaacgga 46871911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52677339 - 52677399
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||    
T  52677339 aaagtgacagttaaataggaacaaaaaatttctctaaaagtgacacttaaaaaggaacgga 52677399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53599980 - 53600040
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||    
T  53599980 aaagtgacagttaaataggaacaaaatttttctccaaaaatgacacttaaaaaggaacgga 53600040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 31984296 - 31984355
Alignment:
Q  2 aagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||||||       ||||||||||| ||||||||||||||||||||    
T  31984296 aagtgacagttaaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacgga 31984355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16464976 - 16465038
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||| |||       |||| |||||||||||||||||||||||||||||    
T  16464976 aaagtgacagttaaatagtaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggatg 16465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21044941 - 21044998
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       ||||| |||||||||||||||||||||||    
T  21044941 aaagtgacagttaaataggaacaaaaattttctcaaaaagtgacacttaaaaaggaac 21044998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36750227 - 36750170
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||| ||||||||||||||||||||||||    
T  36750227 aaagtgacagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaac 36750170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4201512 - 4201572
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| |||||| ||||||||||||||||||||    
T  4201512 aaagtgacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacgga 4201572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 16664262 - 16664231
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  16664262 ttctccaaaagtgacacttaaaaaggaacgga 16664231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22828595 - 22828655
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||| ||||||||||||||||||||    
T  22828595 aaagtgacagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacgga 22828655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23623689 - 23623749
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||| ||||||||||||||||||||||||||    
T  23623689 aaagtgacagttaaatagtaacaaaaattttctcaaaaagtgacacttaaaaaggaacgga 23623749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23719978 - 23720038
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||| ||||||       ||||| ||||||||||||||||||||||||||    
T  23719978 aaagtgacagttaaacaggaacaaaaaatttctctaaaagtgacacttaaaaaggaacgga 23720038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29295404 - 29295348
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaa 57  Q
    ||||| ||||||||||||||||       ||||||||||||||||||||||||||||    
T  29295404 aaagtcacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaa 29295348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32239450 - 32239390
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||| ||||       |||||||||||||||| |||||||||||||||    
T  32239450 aaagtgacagttaaatatgaacaaaatttttctccaaaagtgacatttaaaaaggaacgga 32239390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 36408744 - 36408713
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  36408744 ttctccaaaagtgacacttaaaaaggaacgga 36408713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 36422910 - 36422879
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  36422910 ttctccaaaagtgacacttaaaaaggaacgga 36422879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 37502042 - 37502011
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  37502042 ttctccaaaagtgacacttaaaaaggaacgga 37502011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 42513249 - 42513280
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  42513249 ttctccaaaagtgacacttaaaaaggaacgga 42513280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44014107 - 44014167
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||| |||||| ||||||||||||||    
T  44014107 aaagtgacagttaaataggaacaaattttttctccaaaaatgacacataaaaaggaacgga 44014167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44069081 - 44069021
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||| ||||||||||||       |||| |||||||||||||||||||||||||||    
T  44069081 aaagtgacacttaaataggaacaaaatttttctacaaaagtgacacttaaaaaggaacgga 44069021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 47751558 - 47751527
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  47751558 ttctccaaaagtgacacttaaaaaggaacgga 47751527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48782250 - 48782190
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       || |||||||||||||||||||||| ||||||    
T  48782250 aaagtgacagttaaataggaacaaaaaatttatccaaaagtgacacttaaaaagaaacgga 48782190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 39923808 - 39923775
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||| ||||||||||||||||||||    
T  39923808 ttctccaaaagtggcacttaaaaaggaacggatg 39923775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 53125461 - 53125494
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||| ||||||||||||||||||||||    
T  53125461 ttctccaaaagagacacttaaaaaggaacggatg 53125494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 55935157 - 55935095
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||| |||       |||||||||| | |||||||||||||||||||||    
T  55935157 aaagtgacagttaaatagaaacaaaaaatttctccaaaaataacacttaaaaaggaacggatg 55935095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 23237457 - 23237400
Alignment:
Q  4 gtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||| |||||||||||       |||||||||| |||||||||||||||||||||    
T  23237457 gtgacagataaataggaacaaaaaaattctccaaaaatgacacttaaaaaggaacgga 23237400  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26620545 - 26620598
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaag 54  Q
    ||||||||||||||||||||||       ||||||||| |||||||||||||||    
T  26620545 aaagtgacagttaaataggaacaaaatttttctccaaatgtgacacttaaaaag 26620598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 33809134 - 33809077
Alignment:
Q  4 gtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||| ||||       |||||||||||||||| |||||||||||||||    
T  33809134 gtgacagttaaataagaacaaaaattttctccaaaagtgacaattaaaaaggaacgga 33809077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10812246 - 10812186
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  10812246 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 10812186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14295953 - 14296013
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  14295953 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacgga 14296013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26342627 - 26342567
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  26342627 aaagtgacagttaaataggaaccaaaaatttctccaaaagtgacacttaaaaaggaacgga 26342567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37093497 - 37093437
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  37093497 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 37093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2012908 - 2012847
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggat 62  Q
    ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||    
T  2012908 aaagtgacagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggat 2012847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28145768 - 28145828
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||    
T  28145768 aaagtgacagttaaataggaagaaaaattttctccaaaagtgacacttaaaaaggaacgga 28145828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34357225 - 34357165
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||    
T  34357225 aaagtgacaattaaataggaacaaattttttctccaaaagtgacacttaaaaaggaacgga 34357165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41885672 - 41885612
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||    
T  41885672 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacctaaaaaggaacgga 41885612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 479169 - 479230
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacactt-aaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||| |||||||||||||    
T  479169 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaaggaacgga 479230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35158547 - 35158604
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||| ||||||||||||||||||||||||    
T  35158547 aaagtgacagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaac 35158604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 14288474 - 14288418
Alignment:
Q  5 tgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||       ||||||||||||||||||||||||| ||||||    
T  14288474 tgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacgga 14288418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19594398 - 19594338
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||| |||||||||| |||||||||||||||    
T  19594398 aaagtgacagttaaataggaacaaaaaatttctcaaaaagtgacaattaaaaaggaacgga 19594338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25558379 - 25558439
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||||| |||       ||||||||||||||||||||||||| ||||||    
T  25558379 aaagtgacagttaaatagaaacaaaaattttctccaaaagtgacacttaaaaagaaacgga 25558439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 32674229 - 32674198
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  32674229 ttctccaaaagtgacacttaaaaaggaacgga 32674198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 34399220 - 34399189
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  34399220 ttctccaaaagtgacacttaaaaaggaacgga 34399189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 38072451 - 38072486
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatgaa 65  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38072451 ttctccaaaagtgacacttgaaaaggaacggatgaa 38072486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36375618 - 36375559
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgg 60  Q
    ||||||||||| ||||||||||       |||||||||| ||||||||||||||||||||    
T  36375618 aaagtgacagtcaaataggaacaaaatttttctccaaaaatgacacttaaaaaggaacgg 36375559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13754002 - 13753944
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacg 59  Q
    |||||||||||||||| |||||       ||||||||||| ||||||||||||||||||    
T  13754002 aaagtgacagttaaattggaacaaaaatgttctccaaaagagacacttaaaaaggaacg 13753944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 59
Target Start/End: Original strand, 30264827 - 30264856
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacg 59  Q
    ||||||||||||||||||||||||||||||    
T  30264827 ttctccaaaagtgacacttaaaaaggaacg 30264856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35531485 - 35531545
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  35531485 aaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 35531545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45226767 - 45226827
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  45226767 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga 45226827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13507817 - 13507760
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  13507817 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaac 13507760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13515005 - 13514948
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  13515005 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaac 13514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30686458 - 30686401
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  30686458 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaac 30686401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7782998 - 7782942
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaa 57  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  7782998 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaa 7782942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8464639 - 8464699
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||| |||||||    
T  8464639 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaacgaacgga 8464699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15660634 - 15660574
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||    
T  15660634 aaagtgacagttaaataggaacaaaatatttctccaaaaatgacacttaaaaaggaacgga 15660574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19093315 - 19093255
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||| |||||||||||       ||||||||||||||||||||||||||||||||    
T  19093315 aaagtgacaggtaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacgga 19093255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35483969 - 35484033
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatgaa 65  Q
    ||||||||||||||||||||||       |||||||||| ||||||||||||| |||||||||||    
T  35483969 aaagtgacagttaaataggaacaaaaattttctccaaaaatgacacttaaaaatgaacggatgaa 35484033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18034016 - 18034078
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    |||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||    
T  18034016 aaagtgacagttaaataggaataaaaaatttctcaaaaagtgacacttaaaaaggaacggatg 18034078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1429331 - 1429271
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||||||||||||||||||| ||| |||||||    
T  1429331 aaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttagaaaagaacgga 1429271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 1677234 - 1677203
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  1677234 ttctccaaaagtgacacttaaaaaggaacgga 1677203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9362020 - 9361960
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||       |||| ||||| |||||||||||||||||||||    
T  9362020 aaagtgacagttaaataggaacaaaaaatttcttcaaaaatgacacttaaaaaggaacgga 9361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21927886 - 21927946
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||| ||||       |||| |||||||||||||||||||||||||||    
T  21927886 aaagtgacagttaaataagaacaaaaaatttctgcaaaagtgacacttaaaaaggaacgga 21927946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 28679039 - 28679008
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  28679039 ttctccaaaagtgacacttaaaaaggaacgga 28679008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31570827 - 31570887
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||| ||||       ||||||||||| ||||||||||||||||||||    
T  31570827 aaagtgacagttaaatatgaacaaaaaatttctccaaaagagacacttaaaaaggaacgga 31570887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 32347996 - 32347965
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  32347996 ttctccaaaagtgacacttaaaaaggaacgga 32347965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 37609520 - 37609551
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  37609520 ttctccaaaagtgacacttaaaaaggaacgga 37609551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1038130 - 1038071
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgg 60  Q
    ||||||||||||||||||||||       ||||| |||||||||| ||||||||||||||    
T  1038130 aaagtgacagttaaataggaacaaattttttctctaaaagtgacaattaaaaaggaacgg 1038071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 1045036 - 1044977
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgg 60  Q
    ||||||||||||||||||||||       ||||| |||||||||| ||||||||||||||    
T  1045036 aaagtgacagttaaataggaacaaattttttctctaaaagtgacaattaaaaaggaacgg 1044977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 44182805 - 44182747
Alignment:
Q  3 agtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||| |||       |||||||||| |||||||||||||||||||||    
T  44182805 agtgacagttaaatagaaacaaattttttctccaaaattgacacttaaaaaggaacgga 44182747  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40926933 - 40926990
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    |||||||||||||||||| |||       ||||||||||| |||||||||||||||||    
T  40926933 aaagtgacagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaac 40926990  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43500553 - 43500496
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaac 58  Q
    ||||||||| ||||||||||||       |||||||||| ||||||||||||||||||    
T  43500553 aaagtgacacttaaataggaacaaatattttctccaaaaatgacacttaaaaaggaac 43500496  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49194 - 49132
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacggatg 63  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||| ||||    
T  49194 aaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaactgatg 49132  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 148319 - 148279
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacggatgaaataga 70  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  148319 ttcttcaaaagtgacacttaaaaaggaacggatgaaataga 148279  T

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Target: scaffold0192 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14915 - 14975
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    |||||||||||||||| |||||       |||||| |||||||||||||||||||||||||    
T  14915 aaagtgacagttaaattggaacaaaaagtttctccgaaagtgacacttaaaaaggaacgga 14975  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 26350 - 26381
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  26350 ttctccaaaagtgacacttaaaaaggaacgga 26381  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 184350 - 184381
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  184350 ttctccaaaagtgacacttaaaaaggaacgga 184381  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 195932 - 195992
Alignment:
Q  1 aaagtgacagttaaataggaacnnnnnnnttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||| ||||       |||||||||| |||||||||||||||||||||    
T  195932 aaagtgacagttaaataagaacaaaaattttctccaaaaatgacacttaaaaaggaacgga 195992  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 419857 - 419888
Alignment:
Q  30 ttctccaaaagtgacacttaaaaaggaacgga 61  Q
    ||||||||||||||||||||||||||||||||    
T  419857 ttctccaaaagtgacacttaaaaaggaacgga 419888  T

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