View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20011_low_7 (Length: 463)
Name: NF20011_low_7
Description: NF20011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20011_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 1 - 446
Target Start/End: Complemental strand, 26824974 - 26824529
Alignment:
| Q |
1 |
ctaaagctaacaagcaggtcctagagctatcctcaggattagaagttgatgctttaactcaagctgcactgagtctaaaggatcttgttcatgaagatcc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26824974 |
ctaaagctaacaagcaggtcctagagctatcctcaggattagaagttgatggtttaactcaagctgcactgagtctaaaggatcttgttcatgaagatcc |
26824875 |
T |
|
| Q |
101 |
caaggaagatgtatccagaaagcaaactgaggacagggagcaagttaggaagctgcctccagacttacaaggaaaagatgttgtagaaagctcaaagtta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
26824874 |
caaggaagatgtatccagaaagcaaactgaggacagggagcaagttaggaagctgcctccagacttacaaggaaaagatgttgtagaaagctcagagtta |
26824775 |
T |
|
| Q |
201 |
gtggcatctctgatgaaggtcaataaggagtctgttgcttctaatgcaaggccataagctagaaacacaagtattgatgcacactcctcctatcccatag |
300 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26824774 |
gtggcatctctgatgaaggtcaataaggagtctgttgcttctaatgcaaggccataagctagaaacacaagtattgatgcacactcctcctatcccatag |
26824675 |
T |
|
| Q |
301 |
accttagttcatcatcatcagactctgatgatgataaaatccttagccagagattcaccgacctacataaagtcaaaacccccacaccatcaaccaaacc |
400 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
26824674 |
accttagttcatcatcatcagactctgatgatgataaaatccttagccagagattcacaaacctacataaagtcaaaacccccacaccatcaaccaaacc |
26824575 |
T |
|
| Q |
401 |
taaatctaagcttagacctattcctggccaaggtgatgtatctaaa |
446 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
26824574 |
taaatctaagcttagacctattcctggccaaggtgatgtatctaaa |
26824529 |
T |
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