View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20013_low_8 (Length: 334)
Name: NF20013_low_8
Description: NF20013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20013_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 11 - 316
Target Start/End: Original strand, 37820995 - 37821300
Alignment:
| Q |
11 |
ttatacttaggtacatgagtttatttagcattattagcaaatgcaaatagctaccaactagcaccaacgtcaaaaaagaggatcggtaatattaggttgc |
110 |
Q |
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| T |
37820995 |
ttatacttaggtacatgagtttatttagcattattagcaaatgtaaatagctaccaactagcaccaacgtcaaaaaagaggatgggtaatattaggttgc |
37821094 |
T |
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| Q |
111 |
agtcacattaattatttagtggagaaattaggtgaacatatgtatgaatctagaatatggatacacaacgaaaaggaacccgatgcaaagggagcattac |
210 |
Q |
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| T |
37821095 |
agtcacattaattatttagtggagaaattaggtgaacatatgtatgaatctagaatatggatacacaacgaaaaggaacccgatgcaaagggagcattac |
37821194 |
T |
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| Q |
211 |
atcccttgaattgaagttctacattaatttcaaccaattgttcctgaaatgataggagaccaatgacaccaaaaatttaaaactttgtagagtggttagt |
310 |
Q |
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| T |
37821195 |
atcccttgaattgaagttctacattaatttcaaccaattgttcctgaaatgataggagaccaatgacaccaaaaatttaaaactttgtagagtggttagt |
37821294 |
T |
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| Q |
311 |
ggaatg |
316 |
Q |
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|||||| |
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| T |
37821295 |
ggaatg |
37821300 |
T |
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