View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20016_high_13 (Length: 420)

Name: NF20016_high_13
Description: NF20016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20016_high_13
NF20016_high_13
[»] chr3 (29 HSPs)
chr3 (42-269)||(22814297-22814530)
chr3 (38-269)||(27013414-27013646)
chr3 (36-269)||(9218365-9218602)
chr3 (36-265)||(25770326-25770560)
chr3 (36-237)||(44504129-44504331)
chr3 (42-269)||(51471336-51471568)
chr3 (55-238)||(9217856-9218041)
chr3 (42-218)||(13637531-13637708)
chr3 (43-218)||(37172137-37172313)
chr3 (48-239)||(37172344-37172531)
chr3 (115-269)||(43933441-43933599)
chr3 (36-204)||(26741155-26741324)
chr3 (42-238)||(38485733-38485927)
chr3 (47-237)||(25770583-25770769)
chr3 (122-269)||(13637718-13637869)
chr3 (165-269)||(44504367-44504475)
chr3 (132-239)||(50732260-50732367)
chr3 (132-239)||(50780488-50780595)
chr3 (88-239)||(34743376-34743525)
chr3 (42-141)||(43933602-43933703)
chr3 (173-238)||(51755903-51755968)
chr3 (187-269)||(132062-132148)
chr3 (166-217)||(43933710-43933761)
chr3 (36-99)||(48868611-48868674)
chr3 (36-99)||(51588489-51588551)
chr3 (1-39)||(51471541-51471579)
chr3 (207-269)||(45728340-45728406)
chr3 (43-99)||(45728348-45728404)
chr3 (162-238)||(54588493-54588569)
[»] chr8 (27 HSPs)
chr8 (43-269)||(6297893-6298124)
chr8 (36-237)||(44024262-44024464)
chr8 (48-238)||(6297725-6297916)
chr8 (36-270)||(6297462-6297701)
chr8 (48-269)||(13315203-13315429)
chr8 (36-239)||(21005973-21006177)
chr8 (42-267)||(16662330-16662558)
chr8 (60-269)||(9800217-9800432)
chr8 (48-217)||(21005779-21005949)
chr8 (116-269)||(26997801-26997958)
chr8 (60-269)||(17915382-17915595)
chr8 (48-268)||(10047741-10047966)
chr8 (36-155)||(11089146-11089265)
chr8 (115-269)||(9800040-9800198)
chr8 (115-239)||(26243326-26243450)
chr8 (43-237)||(10047516-10047710)
chr8 (115-239)||(16662203-16662327)
chr8 (42-269)||(12489390-12489615)
chr8 (116-237)||(12489265-12489386)
chr8 (106-269)||(7344778-7344945)
chr8 (166-269)||(17914198-17914305)
chr8 (122-218)||(39234892-39234988)
chr8 (36-99)||(36155274-36155337)
chr8 (48-155)||(45369014-45369122)
chr8 (42-99)||(26997741-26997797)
chr8 (36-108)||(20682701-20682774)
chr8 (195-268)||(26720323-26720400)
[»] chr7 (28 HSPs)
chr7 (42-269)||(5029610-5029842)
chr7 (42-269)||(17075475-17075706)
chr7 (1-269)||(17075220-17075502)
chr7 (36-270)||(28838355-28838591)
chr7 (48-239)||(11974699-11974891)
chr7 (48-239)||(22948741-22948933)
chr7 (42-269)||(18152757-18152989)
chr7 (42-269)||(32092229-32092461)
chr7 (36-237)||(20544162-20544363)
chr7 (41-269)||(44803487-44803721)
chr7 (36-218)||(49053731-49053915)
chr7 (105-237)||(10466700-10466832)
chr7 (48-211)||(23548670-23548834)
chr7 (36-269)||(23548858-23549096)
chr7 (48-269)||(20543912-20544138)
chr7 (48-237)||(49053519-49053707)
chr7 (135-218)||(28852749-28852832)
chr7 (166-239)||(42750100-42750173)
chr7 (134-218)||(28854733-28854817)
chr7 (166-218)||(32092511-32092563)
chr7 (144-213)||(11975023-11975092)
chr7 (103-178)||(11992800-11992875)
chr7 (115-218)||(44803382-44803485)
chr7 (181-239)||(6621113-6621170)
chr7 (1-39)||(32092434-32092472)
chr7 (122-189)||(5029533-5029600)
chr7 (36-78)||(10466639-10466681)
chr7 (1-29)||(18152962-18152990)
[»] chr2 (25 HSPs)
chr2 (36-269)||(2191218-2191456)
chr2 (36-269)||(24093157-24093395)
chr2 (1-269)||(21217128-21217410)
chr2 (1-269)||(21264992-21265274)
chr2 (42-237)||(3691120-3691317)
chr2 (42-269)||(21216924-21217155)
chr2 (42-269)||(21265247-21265478)
chr2 (36-183)||(32861064-32861212)
chr2 (55-237)||(39729476-39729659)
chr2 (48-237)||(24093419-24093609)
chr2 (115-239)||(3691320-3691444)
chr2 (87-269)||(21182308-21182495)
chr2 (48-239)||(10706514-10706704)
chr2 (48-239)||(32860849-32861040)
chr2 (105-269)||(2517414-2517582)
chr2 (48-237)||(7083559-7083749)
chr2 (42-269)||(32114167-32114399)
chr2 (52-218)||(2606523-2606690)
chr2 (122-269)||(21267306-21267457)
chr2 (42-155)||(21267181-21267296)
chr2 (123-269)||(32114410-32114560)
chr2 (36-99)||(18107449-18107512)
chr2 (36-99)||(39947110-39947173)
chr2 (36-99)||(39945845-39945908)
chr2 (38-99)||(23222889-23222950)
[»] scaffold0009 (2 HSPs)
scaffold0009 (36-239)||(107757-107961)
scaffold0009 (48-268)||(107985-108210)
[»] chr4 (41 HSPs)
chr4 (42-237)||(48759972-48760168)
chr4 (42-269)||(3296801-3297033)
chr4 (1-269)||(51906421-51906703)
chr4 (36-269)||(48553897-48554135)
chr4 (42-269)||(51906676-51906908)
chr4 (1-269)||(3296544-3296828)
chr4 (36-239)||(1791399-1791603)
chr4 (36-239)||(29691763-29691967)
chr4 (48-269)||(26168255-26168483)
chr4 (42-269)||(34128995-34129228)
chr4 (64-218)||(30952880-30953035)
chr4 (38-269)||(7118019-7118253)
chr4 (42-238)||(30608490-30608687)
chr4 (36-218)||(35166718-35166900)
chr4 (48-237)||(5544821-5545011)
chr4 (36-259)||(26168004-26168231)
chr4 (72-237)||(29691562-29691727)
chr4 (72-237)||(30608282-30608448)
chr4 (99-266)||(56106376-56106547)
chr4 (48-238)||(1791184-1791375)
chr4 (63-236)||(35468941-35469115)
chr4 (115-237)||(34129231-34129353)
chr4 (129-239)||(30047961-30048071)
chr4 (129-239)||(30062302-30062412)
chr4 (36-117)||(10580024-10580106)
chr4 (118-269)||(41510069-41510224)
chr4 (36-200)||(5545035-5545199)
chr4 (122-237)||(25916974-25917091)
chr4 (171-269)||(38759705-38759807)
chr4 (36-99)||(49426376-49426439)
chr4 (48-120)||(10580130-10580203)
chr4 (72-155)||(19310851-19310935)
chr4 (188-269)||(34294453-34294536)
chr4 (36-99)||(17287490-17287553)
chr4 (36-99)||(17288397-17288460)
chr4 (175-238)||(54142361-54142424)
chr4 (36-99)||(54168847-54168910)
chr4 (1-39)||(30608479-30608517)
chr4 (166-204)||(34397718-34397756)
chr4 (42-96)||(41510230-41510284)
chr4 (181-238)||(26984180-26984237)
[»] chr1 (25 HSPs)
chr1 (36-269)||(3591188-3591426)
chr1 (36-237)||(19895437-19895639)
chr1 (36-237)||(50359291-50359492)
chr1 (42-269)||(9880485-9880718)
chr1 (42-214)||(4288296-4288470)
chr1 (42-239)||(48155135-48155334)
chr1 (48-238)||(18180142-18180332)
chr1 (44-237)||(31436242-31436436)
chr1 (36-269)||(18179880-18180118)
chr1 (122-239)||(47541553-47541670)
chr1 (36-269)||(5172746-5172984)
chr1 (42-238)||(6751083-6751281)
chr1 (48-237)||(19895663-19895853)
chr1 (36-269)||(5683162-5683400)
chr1 (41-211)||(47541679-47541851)
chr1 (102-268)||(19976166-19976336)
chr1 (55-237)||(5683431-5683614)
chr1 (105-234)||(50359165-50359293)
chr1 (122-269)||(6751291-6751443)
chr1 (130-237)||(9880736-9880843)
chr1 (115-239)||(42723186-42723314)
chr1 (41-140)||(42723084-42723184)
chr1 (122-233)||(48155014-48155125)
chr1 (36-99)||(36793598-36793661)
chr1 (35-107)||(37717819-37717891)
[»] chr6 (18 HSPs)
chr6 (275-383)||(4116614-4116722)
chr6 (42-269)||(17157547-17157779)
chr6 (80-269)||(8710236-8710429)
chr6 (275-403)||(4042936-4043073)
chr6 (48-269)||(7645845-7646071)
chr6 (36-236)||(21113067-21113268)
chr6 (41-218)||(1869507-1869672)
chr6 (80-269)||(5974012-5974206)
chr6 (42-237)||(211581-211774)
chr6 (282-364)||(4130652-4130734)
chr6 (36-238)||(14712694-14712896)
chr6 (42-269)||(25932084-25932313)
chr6 (185-269)||(211442-211530)
chr6 (108-237)||(14712927-14713059)
chr6 (1-99)||(17157752-17157860)
chr6 (166-269)||(4510189-4510297)
chr6 (122-202)||(25932323-25932403)
chr6 (36-99)||(7646006-7646069)
[»] chr5 (31 HSPs)
chr5 (42-239)||(18339108-18339306)
chr5 (86-269)||(18999541-18999729)
chr5 (55-269)||(87131-87350)
chr5 (42-239)||(3935550-3935749)
chr5 (36-237)||(3406709-3406913)
chr5 (41-204)||(29751728-29751892)
chr5 (41-204)||(29752394-29752558)
chr5 (48-218)||(35383296-35383467)
chr5 (40-269)||(31176508-31176742)
chr5 (43-234)||(15978430-15978620)
chr5 (36-239)||(30415335-30415538)
chr5 (41-234)||(3406499-3406693)
chr5 (103-269)||(31588265-31588436)
chr5 (70-269)||(1650006-1650212)
chr5 (73-221)||(13987335-13987485)
chr5 (103-269)||(8647984-8648154)
chr5 (46-269)||(16284275-16284508)
chr5 (48-218)||(35373504-35373675)
chr5 (148-269)||(8750324-8750449)
chr5 (166-269)||(18999367-18999474)
chr5 (52-269)||(8750011-8750236)
chr5 (48-155)||(26392141-26392248)
chr5 (36-155)||(18339324-18339444)
chr5 (36-99)||(4187860-4187923)
chr5 (36-99)||(19353093-19353156)
chr5 (116-213)||(3935451-3935546)
chr5 (36-99)||(119187-119250)
chr5 (181-239)||(18340647-18340705)
chr5 (129-218)||(38834724-38834812)
chr5 (186-218)||(87075-87107)
chr5 (36-96)||(119808-119868)
[»] scaffold0063 (2 HSPs)
scaffold0063 (36-237)||(34829-35031)
scaffold0063 (48-269)||(35055-35281)
[»] scaffold0933 (1 HSPs)
scaffold0933 (55-218)||(547-711)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 22814530 - 22814297
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggaca-aaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||  ||||||||||||| || ||||||||||| |||||| |||||  |||||||||||    
T  22814530 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacctaaaaacatatttaaccctaaaataattgggacccaataactatcacatcaacat 22814431  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag- 238  Q
    ||||||||| |||||||| || ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||     
T  22814430 tccgttagaaaattaatagcagggactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaagg 22814331  T
Q  239 ---gcaaaatgtaattactaaaaatatatttaac 269  Q
       |||||||||||  | |||||| |||||||||    
T  22814330 ggcgcaaaatgtaagaattaaaaacatatttaac 22814297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 38 - 269
Target Start/End: Complemental strand, 27013646 - 27013414
Alignment:
Q  38 tattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacctt-aaaataattgagacccattaactgccacatcaa 136  Q
    ||||||||||||||||||||| |||||| |||| ||||||| | |||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||     
T  27013646 tattaaaatgtaaggactattcttcaaaatcacgcaaaatgtaaggaccaaaaacatatttaactttaaaataattgagacccactaactgccacatcag 27013547  T
Q  137 cattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaa 236  Q
     |||||||||||||||||| ||||| || ||||| |||||||| ||||||||||| | |||||||||| |||||||| ||||  | |||||||||||||     
T  27013546 tattccgttagagaattaacaacatagactaattgtgataacggagataaaatgtaaggattttaaaaacatttaataaaatgcaggaactattcttcag 27013447  T
Q  237 aggcaaaatgtaattactaaaaatatatttaac 269  Q
    |  ||||||||||  |||||||| |||||||||    
T  27013446 actcaaaatgtaaagactaaaaacatatttaac 27013414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 36 - 269
Target Start/End: Original strand, 9218365 - 9218602
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| ||  |||||| ||||||||||| ||||||| |||||  ||||||||||||| |||||||||||||| |||||| ||| |  ||||||    
T  9218365 tttattgaaatgcaaatactatttttcaaagtcacgcaaaatgtagggagcaaaaacatatttaaccttaaaataattgggacccactaattatcacatc 9218464  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||||||||||||| ||||  || |||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||||||    
T  9218465 agcattccgttagagaattaacaacagagactaattt-gataacgaagataaaatgtgatgattttaaaaacatttaatgaaatatagggactattcttc 9218563  T
Q  235 aaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||    |||||||||||| |||||||| |||||||||    
T  9218564 aaaggagcgcaaaatgtaatgactaaaaacatatttaac 9218602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 25770560 - 25770326
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||| ||||||| |||||| |||| ||||||| | |||  ||||||||||||| ||||| |||||||| |||||  ||| || ||||||    
T  25770560 tttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaaccttataataattgggacccgctaattgtcacatc 25770461  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||| || | ||||||||||    
T  25770460 agcattccgttagagaattaacaacatggattaattttgataacgatgataaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttc 25770361  T
Q  235 aaagg----caaaatgtaattactaaaaatatatt 265  Q
    |||||    ||||||||||  |||||||| |||||    
T  25770360 aaagggatacaaaatgtaaggactaaaaacatatt 25770326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 44504331 - 44504129
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| |||||||| | ||||||||||| ||||||| | | |  ||||||||||||| |||||||||||||| || ||| |||||| ||||||    
T  44504331 tttattgaaatgcaaggactaattttcaaagtcacgcaaaatgtaagaatcaaaaacatatttaaccttaaaataattgggatccactaactgtcacatc 44504232  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||  |||||||||||| || | ||||||||||    
T  44504231 atcattccgttagagaattaacaacatggactaattttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttc 44504132  T
Q  235 aaa 237  Q
    |||    
T  44504131 aaa 44504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 51471568 - 51471336
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| ||||||||||||||||||  |||||| ||||||||||||| || | |||||||||  ||||||||| |||||||||||||||    
T  51471568 aaaatgtaaggactattcttcaaagtcacacaaaatatagggaccaaaaacatatttaaccctcaaataattggaacccattaagtgccacatcaacatt 51471469  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    |  ||||||||  ||  |||  || |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||  |||||||||||||||      
T  51471468 ctcttagagaaccaacgacagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaaggg 51471369  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  ||||| || |||||||||    
T  51471368 acgcaaaatgtaagaactaagaacatatttaac 51471336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 55 - 238
Target Start/End: Complemental strand, 9218041 - 9217856
Alignment:
Q  55 tattattcaaagtcaca-caaaatgcagggacaaaaaacatatttacct-taaaataattgagacccattaactgccacatcaacattccgttagagaat 152  Q
    |||| |||||||| ||| ||||||| |||||| ||||||||||||| || ||||||||||| |||||| |||||||||||||||| |||||||| |||||    
T  9218041 tattcttcaaagttacagcaaaatgtagggaccaaaaacatatttaactctaaaataattgggacccactaactgccacatcaacgttccgttaaagaat 9217942  T
Q  153 taataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    ||| ||||  || ||||||| |||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||    
T  9217941 taacaacagtgactaattttaataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 9217856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 42 - 218
Target Start/End: Complemental strand, 13637708 - 13637531
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    |||||||||| |||||||||||||||||| ||||||| |||     |||||||||||| || ||||||||||| |||||| |||||||||||||||||||    
T  13637708 aaaatgtaagaactattattcaaagtcacgcaaaatgtaggatatgaaaacatatttaaccctaaaataattgggacccactaactgccacatcaacatt 13637609  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||||||||||||||    |  || |||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  13637608 ccgttagagaattaacggtaaagactaattttgataacgaagataaaatatgaagattttaaaaatatttaatgaaat 13637531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 43 - 218
Target Start/End: Complemental strand, 37172313 - 37172137
Alignment:
Q  43 aaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattc 141  Q
    |||| |||||| |||| ||||||||||| ||||||| | |||| ||||||||||||| |||||||||||||| |||  | ||||||||||||||||||||    
T  37172313 aaatctaaggattatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaaccttaaaataattgggacttactaactgccacatcaacattc 37172214  T
Q  142 cgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||| |||||||   | |  ||| |||||||||||||| ||||||| ||||| |||||||||| |||||||||||||    
T  37172213 cgttggagaattttcagccgggactaattttgataacggagataaactgtgaggattttaaaaacatttaatgaaat 37172137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 48 - 239
Target Start/End: Original strand, 37172344 - 37172531
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||| ||||||  |||||| ||||||| ||||| ||||||||||||||||||||| ||||||     ||| | ||||||||    
T  37172344 taaggactatttttcaaagtcacgcaaaatatagggactaaaaacaaatttaaccttaaaataattgagacccactaactg-----tcatcgttccgtta 37172438  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||||| | |||||| ||||||||||||   |||||||||||| ||||||||||| |||||||| || | || ||| |||||||||||||    
T  37172439 gagaattaacagcatggactaattttgataatagagataaaatgtggagattttaaaaacatttaataaagtgtaggaattattcttcaaagg 37172531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 115 - 269
Target Start/End: Complemental strand, 43933599 - 43933441
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    |||||| |||||| ||||||| |||||| ||| |||||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  43933599 gacccactaactgtcacatcagcattccattatagaattaacaacagggactaattttgataacgaagataaaatgtgaggattttaaaaatatttaatg 43933500  T
Q  215 aaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatatttaac 269  Q
    |||| || | ||||||||||||| |    ||||||||||  ||||||||||||||||||    
T  43933499 aaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaaatatatttaac 43933441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 26741155 - 26741324
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||| |||||  |||||   ||||| |||||||||||||| |||||  |||||| ||||||    
T  26741155 tttattgaaatgtaaggattatttttcaaagtcacgcaaaatgtagggagcaaaaattaatttaaccttaaaataattgggacccgctaactggcacatc 26741254  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    | ||||||||||||||||||| | ||  || |||||||||||||  ||||||||||||| ||||||||||    
T  26741255 agcattccgttagagaattaacagcaatgactaattttgataacagagataaaatgtgaggattttaaaa 26741324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 38485927 - 38485733
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||| ||| ||||||| ||||||||| ||  ||||||| |||| ||||||||||||| || ||||||||||| || ||| ||||||| |||||||||||    
T  38485927 aaaatataatgactattcttcaaagtcgca--aaatgcatggaccaaaaacatatttaaccctaaaataattgggatccactaactgctacatcaacatt 38485830  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    |||||| |||||||| | ||  || |||||||||||||| ||| ||||||  | |||||||||| ||| |||| |||| |||| ||||||||||||||    
T  38485829 ccgttaaagaattaacagcaaagactaattttgataacggaga-aaaatgcaaggattttaaaaacatataataaaatgtatggactattcttcaaag 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 47 - 237
Target Start/End: Original strand, 25770583 - 25770769
Alignment:
Q  47 gtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtt 145  Q
    ||||| |||||| ||||||||||| ||||||| || ||  ||||| ||||||| || ||||||||||| |||||| ||| |||||||||  ||||| |||    
T  25770583 gtaagaactattcttcaaagtcacgcaaaatgtagagatcaaaaatatatttaaccctaaaataattgggacccactaattgccacatcg-cattctgtt 25770681  T
Q  146 agagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    |||||||||| ||    || ||||||| |||||| ||||||||| | || ||||||||| |||||||| |||| || |||||||||||||||    
T  25770682 agagaattaacaa----gactaatttttataacggagataaaatataaatattttaaaaacatttaataaaatgtaggaactattcttcaaa 25770769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 13637718 - 13637869
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatata 221  Q
    ||||||| |||||| ||||| |||| |||||||| |||| ||| || ||||||||||| ||||||||||||| ||||||||||  |||||||||||| ||    
T  13637718 taactgctacatcagcattctgttaaagaattaacaacaaggactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgta 13637817  T
Q  222 tgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
       ||||||||||||||    |||||||||||  |||| ||| |||||||||    
T  13637818 gagactattcttcaaaggggcgcaaaatgtaaggactagaaacatatttaac 13637869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 44504367 - 44504475
Alignment:
Q  165 ttaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaat 260  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  ||||||||     
T  44504367 ttaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaac 44504466  T
Q  261 atatttaac 269  Q
    | |||||||    
T  44504467 acatttaac 44504475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 50732367 - 50732260
Alignment:
Q  132 atcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattc 231  Q
    |||| |||||| |||||||||||| | || ||| |||||||||||||| |||||||||| || ||||||||||  |||||||||||| |||| ||||||     
T  50732367 atcagcattccattagagaattaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactattt 50732268  T
Q  232 ttcaaagg 239  Q
    ||||||||    
T  50732267 ttcaaagg 50732260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 50780488 - 50780595
Alignment:
Q  132 atcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattc 231  Q
    |||| |||||| |||||||||||| | || ||| |||||||||||||| |||||||||| || ||||||||||  |||||||||||| |||| ||||||     
T  50780488 atcagcattccattagagaattaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactattt 50780587  T
Q  232 ttcaaagg 239  Q
    ||||||||    
T  50780588 ttcaaagg 50780595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 34743376 - 34743525
Alignment:
Q  88 aaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataa 186  Q
    |||||||||||| || ||||||||||| |||||| ||||||||||||||    ||||||| ||||||||   ||  || |||||||||||||  | ||||    
T  34743376 aaaacatatttaaccctaaaataattgggacccactaactgccacatcag---tccgttaaagaattaaccgcagagactaattttgataacatatataa 34743472  T
Q  187 aatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||| |||||| ||| ||||||||||||| || | |  ||||||||||||    
T  34743473 aatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagg 34743525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 141
Target Start/End: Original strand, 43933602 - 43933703
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||| ||||||| ||||||||| | ||||||  |||||| |||||||||||||| || ||||||||||| || ||| |||| |||||||||||||    
T  43933602 aaaatgtaaagactattcttcaaagtcgcgcaaaatatagggaccaaaaaacatatttaaccctaaaataattgggagccactaaccgccacatcaacat 43933701  T
Q  140 tc 141  Q
    ||    
T  43933702 tc 43933703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 51755903 - 51755968
Alignment:
Q  173 gataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||    
T  51755903 gataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 51755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 132062 - 132148
Alignment:
Q  187 aatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||||| |||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||| | |||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaac 132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 43933710 - 43933761
Alignment:
Q  166 taattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaa 217  Q
    |||||||||||||  ||||||||| ||| |||||||||| ||||||||||||    
T  43933710 taattttgataacagagataaaatatgaggattttaaaaacatttaatgaaa 43933761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 48868611 - 48868674
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| ||||||| |||||||||||||||||  | ||||||| |||||| || ||||||||||    
T  48868611 tttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatattta 48868674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 51588489 - 51588551
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||||||||||| ||| |||| |||||| |||| |||||||||||||| || ||||||||||    
T  51588489 tttattaaaatgta-ggattattcttcaaaatcacgcaaaatgcagggactaataacatattta 51588551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51471541 - 51471579
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta 39  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  51471541 tgactttgaagaatagtccttacattttgcgtgaattta 51471579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 45728340 - 45728406
Alignment:
Q  207 atttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatatttaac 269  Q
    |||||||||||| |||| |||||||||||||||    ||||||||||  |||||||| |||||||||    
T  45728340 atttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatatttaac 45728406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 45728348 - 45728404
Alignment:
Q  43 aaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    ||||||| |||||||| |||||||  |||||||||| | |||| |||||||||||||    
T  45728348 aaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatattta 45728404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 54588569 - 54588493
Alignment:
Q  162 ggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    ||||||||||||  |||| || ||||||||    ||||||||| |||||| |||||| |||| ||||||||||||||    
T  54588569 ggattaattttgtaaacggaggtaaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaag 54588493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 43 - 269
Target Start/End: Original strand, 6297893 - 6298124
Alignment:
Q  43 aaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattc 141  Q
    |||||||||||||||| ||||||||||| ||||||| |||||| ||||||||| ||| || ||||||||||| ||||||||||||||||||||| |||||    
T  6297893 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacataattatccctaaaataattgggacccattaactgccacatcagcattc 6297992  T
Q  142 cgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag--- 238  Q
    |||||||||||||| || | ||| |||||||||||||| | ||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||       
T  6297993 cgttagagaattaacaatagggactaattttgataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggga 6298092  T
Q  239 -gcaaaatgtaattactaaaaatatatttaac 269  Q
     |||||||||||  |||||||| | |||||||    
T  6298093 agcaaaatgtaagcactaaaaacacatttaac 6298124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 44024464 - 44024262
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||||||||||| ||||||||||| ||||||| | |||| ||||||||||||| |||||||||||||||||| || |||||| ||||||    
T  44024464 tttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaaccttaaaataattgagactcactaactgtcacatc 44024365  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||  |||||||||||| |||||||||| |||||  |||||| |||| ||||||||||    
T  44024364 aacattccgttagagaattaacaacattgactaattttgataacggggataaaatgtgatgattttaaaaacatttggtgaaatgtatggactattcttc 44024265  T
Q  235 aaa 237  Q
    |||    
T  44024264 aaa 44024262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 48 - 238
Target Start/End: Original strand, 6297725 - 6297916
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||||||| ||| |||||||||||||| |||||| ||||| ||||||||||||||  |||    
T  6297725 taaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacataattaaccttaaaataattgggacccagtaactaccacatcaacattctatta 6297824  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    |||||| || |||| ||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||    
T  6297825 gagaatcaacaacaaggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag 6297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 36 - 270
Target Start/End: Complemental strand, 6297701 - 6297462
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||||||  |||| | ||||||||||| ||||||| |  ||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  6297701 tttattgaaatgtaaaaactaattttcaaagtcacgcaaaatgtacagacaaaaaacatatttaaccttaaaataattgggacccactaactgccacatc 6297602  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||| ||||||||| | || ||| |||||||||||||  ||| ||||||||| |||||||||| ||||||||||||| || ||||||||||||    
T  6297601 agcattccgttggagaattaacagcaaggactaattttgataacagagagaaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttc 6297502  T
Q  235 aaag----gcaaaatgtaattactaaaaatatatttaaca 270  Q
    ||||    |||||||||||  |||||| | ||||||||||    
T  6297501 aaaggggcgcaaaatgtaaggactaaagacatatttaaca 6297462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 48 - 269
Target Start/End: Complemental strand, 13315429 - 13315203
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||||||    
T  13315429 taaggactattcttcaaagtcacgcaaaatgtagggactaaaaacatatttaaccctaaaataattgggacccactaactgccacatcaacattccgtta 13315330  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa----ggcaa 242  Q
    ||||||||| |  |  |  |||||||||||||  ||||||||||||| |||||||||| ||||||||||||| || | ||||||||| |||     ||||    
T  13315329 gagaattaacaggaatggctaattttgataacagagataaaatgtgatgattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaa 13315230  T
Q  243 aatgtaattactaaaaatatatttaac 269  Q
    |||||||  |||||||| |||||||||    
T  13315229 aatgtaaggactaaaaacatatttaac 13315203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 36 - 239
Target Start/End: Original strand, 21005973 - 21006177
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||||||||||| ||||||| ||| ||||||| |||||| ||||||||||||| |||||||||||||  || ||| |||||||||||||    
T  21005973 tttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaaccttaaaataatttggatccactaactgccacatc 21006072  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | |||| | |||||||||||| | || |||| ||||||||||||| ||||||||||||| |||||||||| |||||||| |||| || | |||||| |||    
T  21006073 agcatttcattagagaattaacagcagggatcaattttgataacggagataaaatgtgaggattttaaaaacatttaataaaatgtagggactatttttc 21006172  T
Q  235 aaagg 239  Q
    |||||    
T  21006173 aaagg 21006177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 42 - 267
Target Start/End: Original strand, 16662330 - 16662558
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||| |||| |||| |||||| |||||||||||| |||||| ||||||||||||| || | ||||||||| |||||| |||| ||||||||||||||    
T  16662330 aaaatgttagga-tattcttcaaattcacacaaaatgtagggactaaaaacatatttaaccctgaaataattgggacccactaaccgccacatcaacatt 16662428  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa--- 237  Q
    ||||||||||||||| |||| ||||||||||||| |||| |||| |||| |||  ||||||||| ||||||||||||| || |||||||||||||||       
T  16662429 ccgttagagaattaacaacagggattaattttgagaacggagat-aaatatgagaattttaaaaacatttaatgaaatgtaggaactattcttcaaaaga 16662527  T
Q  238 -ggcaaaatgtaattactaaaaatatattta 267  Q
      |||||||||||  |||||||| |||||||    
T  16662528 gcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 60 - 269
Target Start/End: Original strand, 9800217 - 9800432
Alignment:
Q  60 ttcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaata 157  Q
    |||||||||||  |||||| |||||| |||||||||||||| || ||||||||||| ||| |  ||| | |||||||||||||| ||||||||||||| |    
T  9800217 ttcaaagtcacgtaaaatgtagggaccaaaaaacatatttaaccctaaaataattgggactcgctaattaccacatcaacattctgttagagaattaaca 9800316  T
Q  158 acatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattac 253  Q
     |||  | |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||    |||||||| ||  ||    
T  9800317 gcataaactaattttgataacgaagataaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggac 9800416  T
Q  254 taaaaatatatttaac 269  Q
     |||||||||||||||    
T  9800417 caaaaatatatttaac 9800432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 21005949 - 21005779
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| |||||||| |  ||||||| |||||| ||||| ||||||| || ||||||||||| || ||| ||||||||||||||||||| |||||    
T  21005949 taaggactattcttcaaagttatgcaaaatgtagggaccaaaaatatatttaaccctaaaataattgggatccactaactgccacatcaacatttcgtta 21005850  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaa 217  Q
    ||||||||| |  |  || |||||||||||||| ||||||||| ||||||||||||||  |||||||||||    
T  21005849 gagaattaacaggaaagaataattttgataacggagataaaatatgaagattttaaaaaaatttaatgaaa 21005779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 116 - 269
Target Start/End: Original strand, 26997801 - 26997958
Alignment:
Q  116 acccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatga 215  Q
    ||||| ||||| |||||||| ||||||||||||||||||| | || ||| |||||||||||||| ||||||||||||| ||||||||||  | |||||||    
T  26997801 acccactaactaccacatcagcattccgttagagaattaacagcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatga 26997900  T
Q  216 aatatatgaactattcttcaa----aggcaaaatgtaattactaaaaatatatttaac 269  Q
    ||| |||| ||||||||||||    | |||||||||||  |||||||| |||||||||    
T  26997901 aatgtatggactattcttcaaatggacgcaaaatgtaagaactaaaaacatatttaac 26997958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 60 - 269
Target Start/End: Original strand, 17915382 - 17915595
Alignment:
Q  60 ttcaaagtcacacaaaatgcagggacaaaaaacatatttacctt-aaaataattgagacccattaactgccacatcaacattccgttagagaattaataa 158  Q
    ||||||||||| ||||||| ||| || ||||||| ||||| ||| |||||||||  |||||| ||||||||||||||| |||| |||| |||||||| |     
T  17915382 ttcaaagtcacgcaaaatgtaggaaccaaaaacagatttaactttaaaataattaggacccactaactgccacatcaatattctgttaaagaattaacag 17915481  T
Q  159 catggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg----caaaatgtaattact 254  Q
    ||  || |||||||||||||  ||||||||||||| ||||| |||| |||||||| |||| || | | |||||||||||||    ||||||||||  |||    
T  17915482 caaagactaattttgataacagagataaaatgtgaggatttaaaaaacatttaataaaatgtaagga-tattcttcaaaggagcacaaaatgtaaggact 17915580  T
Q  255 aaaaatatatttaac 269  Q
    ||||| |||||||||    
T  17915581 aaaaacatatttaac 17915595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 268
Target Start/End: Original strand, 10047741 - 10047966
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| |||||||||||  |||||  |||||| |||||||||||||  | ||||||||||| |||| | ||||||| ||| ||||||||||||     
T  10047741 taaggactattcttcaaagtcacgaaaaatatagggaccaaaaacatatttaaacctaaaataattgggacctactaactgctacaacaacattccgttg 10047840  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaaggc----aa 242  Q
     |||||| | | ||  || |||||||||||||| ||||||||| |||| |||||||||  ||||||||| |||||   |||||||||||||||     ||    
T  10047841 tagaattgacatcaaagactaattttgataacggagataaaatatgaaaattttaaaaatatttaatgatatataaagactattcttcaaaggagtggaa 10047940  T
Q  243 aatgtaattactaaaaatatatttaa 268  Q
    |||||||  | |||||||||||||||    
T  10047941 aatgtaaggattaaaaatatatttaa 10047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 11089146 - 11089265
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttaccttaaaataattgagacccattaactgccacatca 135  Q
    |||||| ||||||||| |||||| |||||||||||| |||||| | |||| ||||||||||||| ||||||||||||| || ||| |||||| |||||||    
T  11089146 tttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaacttaaaataattgggatccactaactgtcacatca 11089245  T
Q  136 acattccgttagagaattaa 155  Q
    ||||| ||||||| ||||||    
T  11089246 acatttcgttagataattaa 11089265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 269
Target Start/End: Complemental strand, 9800198 - 9800040
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    |||||| |||||||||||||| ||||||||||||||||||| | ||  || |||||||||||||| |||| |||||||| |||||||||| ||||||||     
T  9800198 gacccactaactgccacatcagcattccgttagagaattaacagcaaagactaattttgataacggagatgaaatgtgaggattttaaaaacatttaata 9800099  T
Q  215 aaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    |||| || | | ||||||||||||    ||||||| |||  |||||||| |||||||||    
T  9800098 aaatgtaaggattattcttcaaagaggcgcaaaatctaaggactaaaaacatatttaac 9800040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 115 - 239
Target Start/End: Original strand, 26243326 - 26243450
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    |||||| |||||| |||||||||||||  |||||||||||| | | ||||  ||||||||||| | ||||||||||||| |||||||||| |||||||||    
T  26243326 gacccactaactgtcacatcaacattcaattagagaattaacaccgtggacaaattttgataatggagataaaatgtgaggattttaaaaacatttaatg 26243425  T
Q  215 aaatatatgaactattcttcaaagg 239  Q
    |||||||   |||||||||||||||    
T  26243426 aaatatagagactattcttcaaagg 26243450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 10047710 - 10047516
Alignment:
Q  43 aaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattc 141  Q
    ||||| |||||||||| |||| | |||  ||||||| || ||| |||||||||||||  ||||||||||||| || ||| |   | ||||||||   |||    
T  10047710 aaatgcaaggactatttttcagaatcatgcaaaatgtagagaccaaaaacatatttaatcttaaaataattgggatccacttttttccacatcagtgttc 10047611  T
Q  142 cgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    |||||||||||||| | |||||| |||||||||||||| |||||||||||||  ||||||||| ||||||||| ||| || | |||||||||||||    
T  10047610 cgttagagaattaacagcatggactaattttgataacggagataaaatgtgagaattttaaaaacatttaatg-aatgtagggactattcttcaaa 10047516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 239
Target Start/End: Complemental strand, 16662327 - 16662203
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    |||||| |||||||||||||| |||| |||||||||||||| |  | ||| ||||||| |||||  |||||||||||||  ||||||||| |||||||||    
T  16662327 gacccactaactgccacatcagcatttcgttagagaattaacagtagggactaattttaataacagagataaaatgtgagaattttaaaaacatttaatg 16662228  T
Q  215 aaatatatgaactattcttcaaagg 239  Q
    |||| || | |||||||||||||||    
T  16662227 aaatgtagggactattcttcaaagg 16662203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 12489390 - 12489615
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||| | ||||||||||| ||||||  || ||| |||||| ||||||| ||||||||||||||| || || |||||| ||||||| |||    
T  12489390 aaaatgtaaggactactcttcaaagtcacgcaaaatatagcgaccaaaaaatatatttaaccttaaaataattgaaactcactaactgtcacatcagcat 12489489  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttca---- 235  Q
    |||||||||||||||| ||||  ||||       |||||  ||||||||||| | |||||||||| || |||||||||| || | |||||||||||        
T  12489490 tccgttagagaattaacaacaatgatt-------ataacagagataaaatgtaaggattttaaaaaca-ttaatgaaatgtaaggactattcttcataac 12489581  T
Q  236 aaggcaaaatgtaattactaaaaatatatttaac 269  Q
     | |||||||||||  |||||||| |||||||||    
T  12489582 gacgcaaaatgtaaggactaaaaacatatttaac 12489615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 12489386 - 12489265
Alignment:
Q  116 acccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatga 215  Q
    ||||| ||||| |||| ||| ||||||||||||||||||| | ||  || ||||||||||||| ||||||||||| || ||||||||||  |||||||||    
T  12489386 acccactaactaccacgtcaccattccgttagagaattaacagcagagactaattttgataacaaagataaaatgcgaggattttaaaaatatttaatga 12489287  T
Q  216 aatatatgaactattcttcaaa 237  Q
    ||| || | |||||||||||||    
T  12489286 aatgtagggactattcttcaaa 12489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 269
Target Start/End: Original strand, 7344778 - 7344945
Alignment:
Q  106 aataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaag 205  Q
    |||||||| || ||||||| ||   ||||| |||| ||||||||||||||||  |  || |||||||||||||| | ||||||| ||| ||||||||||     
T  7344778 aataattgggatccattaattgttccatcagcatttcgttagagaattaatagtaatgagtaattttgataacggacataaaatatgaggattttaaaaa 7344877  T
Q  206 catttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatatttaac 269  Q
    ||| |||| |||| |||| | |||||||||||||    ||||||||||  |||||||| |||| ||||    
T  7344878 catataataaaatgtatggattattcttcaaaggggcacaaaatgtaaggactaaaaacatatataac 7344945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 17914305 - 17914198
Alignment:
Q  166 taattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaata 261  Q
    |||||||||||||  ||||||||||||| |||||||||| |||||||| |||| || | ||||||||||||||    |||||||||||  ||| |||| |    
T  17914305 taattttgataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaaaca 17914206  T
Q  262 tatttaac 269  Q
    ||||||||    
T  17914205 tatttaac 17914198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 39234988 - 39234892
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||||| ||||||| ||||||||||||||||||| | ||| || |||||||||||||  |||||||||||||  ||||| |||  ||||||| ||||    
T  39234988 taactgtcacatcagcattccgttagagaattaacagcattgactaattttgataactgagataaaatgtgagaatttttaaaatatttaataaaat 39234892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 36155337 - 36155274
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||||||||||| |||||||||||||||||| ||||||||| |||||| || | ||||||||    
T  36155337 tttattaaaatgtagggactattattcaaagtcgcacaaaatgtagggaccaatagcatattta 36155274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 45369122 - 45369014
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| |||||| |||| ||||||| | |||| ||||||||||| | || ||||||||||| ||| || |||||| ||||||| ||||| ||||    
T  45369122 taaggattattcttcaaaatcacgcaaaatgtacggaccaaaaacatattcaaccctaaaataattgggactcactaactgtcacatcagcattctgtta 45369023  T
Q  147 gagaattaa 155  Q
    || ||||||    
T  45369022 gacaattaa 45369014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 26997797 - 26997741
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    ||||||||||||||||| ||||||||||| ||||||  ||||| ||||||||||||||    
T  26997797 aaaatgtaaggactattcttcaaagtcacgcaaaatataggga-aaaaaacatattta 26997741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 20682774 - 20682701
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaat 108  Q
    ||||||||||||||||||||||| ||||||||| | | ||||  |||||| || || |||||| ||||||||||    
T  20682774 tttattaaaatgtaaggactattcttcaaagtcgcgctaaatatagggaccaataagatatttaaccttaaaat 20682701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 26720400 - 26720323
Alignment:
Q  195 gattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaa 268  Q
    ||||||||||  |||||||||||| || | ||||||||||||||    ||||||||||   |||||||||||||||||    
T  26720400 gattttaaaaatatttaatgaaatgtagggactattcttcaaaggagcgcaaaatgtagggactaaaaatatatttaa 26720323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 4e-57; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 5029610 - 5029842
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||| |||||||||||||| || ||||||||||| |||||| |||||||||||||| |||    
T  5029610 aaaatgtaaggactattcttcaaagtcacgcaaaatatagggaccaaaaaacatatttaaccctaaaataattgggacccactaactgccacatcagcat 5029709  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag- 238  Q
    || |||||| |||||| |||||||| ||||||||||| || ||||||||||||| || ||||||| |||||||||||||||| | ||||||||||||||     
T  5029710 tctgttagataattaacaacatggactaattttgatagcggagataaaatgtgagga-tttaaaaacatttaatgaaatatagggactattcttcaaaga 5029808  T
Q  239 ---gcaaaatgtaattactaaaaatatatttaac 269  Q
       |||||||||||  ||||||||||||||||||    
T  5029809 gacgcaaaatgtaacgactaaaaatatatttaac 5029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 17075475 - 17075706
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||  | ||||||||||| || ||||||||||| |||||| ||||||||| |||| ||||    
T  17075475 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataattg-gacccactaactgccatatcagcatt 17075573  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    ||||||||||||||||| || ||| |||||||||||  | ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||      
T  17075574 ccgttagagaattaatagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 17075673  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  |||||||| |||||||||    
T  17075674 gcgcaaaatgtaaggactaaaaagatatttaac 17075706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 17075502 - 17075220
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta----------ttaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaa 90  Q
    |||||||||| ||||||||||||||||||||||||||||          ||||||| ||||||||||| ||||||||||| |||| || || ||| ||||    
T  17075502 tgactttgaagaatagtccttacattttgcgtgactttaaaagcatttattaaaatataaggactattcttcaaagtcacgcaaa-tgtagcgaccaaaa 17075404  T
Q  91 acatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaat 189  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||| |||||||||| ||||||||   || ||| |||||||| |||||  ||||||||    
T  17075403 acatatttaatcttaaaataattgggacccactaactgccacatcagcattccgttaaagaattaacggcaaggactaattttgttaacggggataaaat 17075304  T
Q  190 gtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    |||| |||||||||| | ||||||||||| || | ||||||||||||||    ||||||| |||  |||||||| |||||||||    
T  17075303 gtgaggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaaacatatttaac 17075220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 36 - 270
Target Start/End: Complemental strand, 28838591 - 28838355
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||||||||||||||| |||| |||||| | |  ||||||| |||||| ||||||||||||| ||||||||||||||  ||||| |||||||||||||    
T  28838591 tttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaaccttaaaataattggaacccactaactgccacatc 28838492  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | |||| |||||||||||||| | ||  || |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |  | ||  ||||||    
T  28838491 agcatttcgttagagaattaacaccaatgactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtcgggac--ttcttc 28838394  T
Q  235 aaagg---caaaatgtaattactaaaaatatatttaaca 270  Q
    |||||   ||||||||||  |||||||| ||||||||||    
T  28838393 aaaggacacaaaatgtaaagactaaaaacatatttaaca 28838355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 48 - 239
Target Start/End: Complemental strand, 11974891 - 11974699
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| ||||| ||||||||||||| || ||| ||||||||||||| || ||||||||||| |||| | |||||||||||| | ||||||||||    
T  11974891 taaggattattcttcaatgtcacacaaaatgtagagaccaaaaacatatttaaccctaaaataattgggaccgactaactgccacataagcattccgtta 11974792  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||||| ||||  || |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||   |||||| ||||||||    
T  11974791 gagaattaacaacaaagactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtacagactatttttcaaagg 11974699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 48 - 239
Target Start/End: Original strand, 22948741 - 22948933
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||  ||||||| ||||| |||||||||||||| ||  |||||||||| |||||| ||||||||||||||| |||||||||    
T  22948741 taaggactattcttcaaagtcatgcaaaatgtagggataaaaaacatatttaaccccaaaataattgggacccactaactgccacatcaatattccgtta 22948840  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||| ||||| || |  || |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||   |||||||||||||||    
T  22948841 gagcattaacaatagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattcttcaaagg 22948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 18152989 - 18152757
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| |||||||||||   ||||| |||||| ||||||||||||| ||||||||||||||||| ||| |||||| ||||||| ||||    
T  18152989 aaaatgtaaggactatttttcaaagtcacgtcaaatgtagggaccaaaaacatatttaaccttaaaataattgagatccactaactgtcacatcagcatt 18152890  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    ||||||||||||||| ||||     |||||||||||||| ||||||||||||| |||||||| | |||||||  |||| || | ||||||||||||||      
T  18152889 ccgttagagaattaacaacagaagctaattttgataacggagataaaatgtgaggattttaagaacatttaacaaaatgtagggactattcttcaaaggg 18152790  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  ||| |||| |||||||||    
T  18152789 gcgcaaaatgtaagaactgaaaacatatttaac 18152757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 32092461 - 32092229
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||| | |||||||||||  | ||||||||||| |||||| ||||||||||||||  |||    
T  32092461 aaaatgtaaggactattcttcaaagtcacgcaaaatatagggaccacaaacatatttaatcctaaaataattgggacccactaactgccacatcagtatt 32092362  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    |||||| |||||||| ||||  || ||||||||||||| || | ||||||||| |||||||||| |||||||||||||  | | ||||||||||||||      
T  32092361 ccgttatagaattaacaacaaagactaattttgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagag 32092262  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  |||||||| |||||||||    
T  32092261 gcgcaaaatgtaaggactaaaaacatatttaac 32092229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 20544162 - 20544363
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| |||||||||| || |||||||| |||||   |||||| ||||||||||||| || ||||| ||||| || ||| |||||||||||||    
T  20544162 tttattgaaatgcaaggactattgtttaaagtcacgcaaaacttagggaccaaaaacatatttaaccataaaaaaattgggatccactaactgccacatc 20544261  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    |||||| |||||||||||||||| ||  || | ||||||||||||||||||||||||| ||||||||||| ||||||||||||| || | ||||||||||    
T  20544262 aacattacgttagagaattaatagcaacgactgattttgataacgaagataaaatgtg-agattttaaaaacatttaatgaaatgtaaggactattcttc 20544360  T
Q  235 aaa 237  Q
    |||    
T  20544361 aaa 20544363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 269
Target Start/End: Original strand, 44803487 - 44803721
Alignment:
Q  41 taaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaaca 138  Q
    ||||||||||||| |||| ||||||||||| ||||||| |||||| |||||||||||||| ||  |||||||||| ||| || ||| |||||||||||||    
T  44803487 taaaatgtaaggattattcttcaaagtcacgcaaaatgtagggaccaaaaaacatatttaacccaaaaataattgggactcagtaattgccacatcaaca 44803586  T
Q  139 ttccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    |||||||||| ||| |  | |||||| |||||||||||||| |||||||||||||  ||||||||| ||||||||||||| ||   ||||||||| ||||    
T  44803587 ttccgttagaaaatgatcagcatggactaattttgataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattctttaaag 44803686  T
Q  239 ----gcaaaatgtaattactaaaaatatatttaac 269  Q
        |||||||||||  |||||||| |||||||||    
T  44803687 aagcgcaaaatgtaaggactaaaaacatatttaac 44803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 36 - 218
Target Start/End: Original strand, 49053731 - 49053915
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| || ||||||| ||||||||||| ||||||| | |||| ||||||||||||| || ||||||||||| |||||| ||| |||||||||    
T  49053731 tttattgaaatgcaatgactatttttcaaagtcacccaaaatgtatggaccaaaaacatatttaaccataaaataattgggacccactaattgccacatc 49053830  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacg-aagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    ||||||||||||||| ||||||| ||| || |||||||||||| | || |||||| |||| |||||||||| | |||||||||||    
T  49053831 aacattccgttagagcattaatagcatagactaattttgataatgaaaaataaaacgtgaggattttaaaaacttttaatgaaat 49053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 10466700 - 10466832
Alignment:
Q  105 aaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||  | |||||||||||| | ||||||||||||| ||||||||||    
T  10466700 aaataattgagacccgttaactgtcacatcaacattccgttagagaattaatagcataaactaattttgataatggagataaaatgtgacgattttaaaa 10466799  T
Q  205 gcatttaatgaaatatatgaactattcttcaaa 237  Q
     |||||||| |||||||   |||||||||||||    
T  10466800 acatttaataaaatatagagactattcttcaaa 10466832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 23548834 - 23548670
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| |||| |||||| ||||||| ||  || ||||||||||||| || ||||||||||| |||||  |||||||||||||| ||||||||||    
T  23548834 taaggaatattcttcagagtcacgcaaaatgtagaaaccaaaaacatatttaaccctaaaataattgggacccgctaactgccacatcagcattccgtta 23548735  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcattta 211  Q
    ||||||||| ||||  || |||||||||||||  |||||||||||||  ||||||||| ||||||    
T  23548734 gagaattaacaacaaagactaattttgataacagagataaaatgtgagtattttaaaaacattta 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 36 - 269
Target Start/End: Original strand, 23548858 - 23549096
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||| |||| |||||| |  |||||||| ||||||| |||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  23548858 tttattgaaatataagaactattttctaaagtcacgcaaaatgtagggaccaaaaatatatttaaccttaaaataattgggacccattaactgccacatc 23548957  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||| || |  |||||   ||  || |||||||||||||| | ||||||| ||| ||||| ||||  |||||||||||||||   | ||||||||    
T  23548958 agcattccgctaaaatattaacgccagtgactaattttgataacggaaataaaatttgaggatttcaaaaagatttaatgaaatatagagagtattcttc 23549057  T
Q  235 aaa----ggcaaaatgtaattactaaaaatatatttaac 269  Q
    |||     |||||||||||  | ||||||||||||||||    
T  23549058 aaaagggcgcaaaatgtaagaaataaaaatatatttaac 23549096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 269
Target Start/End: Complemental strand, 20544138 - 20543912
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| ||||||||||  ||||||| ||| |||||||||||||||| ||  ||||||| || || ||| |||||  ||||||| |||  |||||    
T  20544138 taaggattattcttcaaagtcatgcaaaatgtaggaacaaaaaacatatttaacccaaaaataactgcgatccactaactatcacatcaccatctcgtta 20544039  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg----caa 242  Q
    ||||||||| | ||   | |||||||||||||| ||||||||| ||| ||||||||||  |||||||||||| || | |||||||||||||||    |||    
T  20544038 gagaattaacagcagaaactaattttgataacggagataaaatatgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaaggggcacaa 20543939  T
Q  243 aatgtaattactaaaaatatatttaac 269  Q
    |||||||  | |||||| |||||||||    
T  20543938 aatgtaagaattaaaaacatatttaac 20543912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 237
Target Start/End: Complemental strand, 49053707 - 49053519
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| |||| ||||||  ||||||   |||| ||||| ||||||| || ||||||||||| ||| || ||| |  ||||||| ||||||||||    
T  49053707 taaggattatttttcacagtcacgtaaaatgagaggaccaaaaatatatttaaccctaaaataattgggactcactaaatatcacatcagcattccgtta 49053608  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    ||||||||| ||||| || |||||||||||||||||||||||| |||  |||||||||  |  |||| |||| |||| |||||||||||||    
T  49053607 gagaattaacaacat-gactaattttgataacgaagataaaatatgagaattttaaaa-aaaataataaaatgtatgtactattcttcaaa 49053519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 28852832 - 28852749
Alignment:
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||||||| |||||||||||| ||||  |  ||||||||||||||  |||||||||||| |||||||||| |||||||||||||    
T  28852832 aacattcccttagagaattaacaacagaggctaattttgataacggggataaaatgtgaggattttaaaaacatttaatgaaat 28852749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 42750100 - 42750173
Alignment:
Q  166 taattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||| |||||| ||||||||||||| |||||||||| | ||||||||||| || | |||||||||||||||    
T  42750100 taattttaataacggagataaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattcttcaaagg 42750173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 28854817 - 28854733
Alignment:
Q  134 caacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||||||| |||||| |||||| ||||| | ||||||||||||||  | ||||||||||| |||||||||| |||||||| ||||    
T  28854817 caacattcggttagaaaattaacaacataggttaattttgataactgaaataaaatgtgaggattttaaaaacatttaataaaat 28854733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 32092511 - 32092563
Alignment:
Q  166 taattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  32092511 taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaat 32092563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 11975023 - 11975092
Alignment:
Q  144 ttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaat 213  Q
    |||||||||||| ||||  || |||||||||||||| | ||||||||||| |||||||||| ||||||||    
T  11975023 ttagagaattaacaacagagactaattttgataacggaaataaaatgtgaggattttaaaaacatttaat 11975092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 11992875 - 11992800
Alignment:
Q  103 taaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataac 178  Q
    ||||||||||| | | ||||||||| ||||||| |||||  |||||||||||| | || |||||||||||||||||    
T  11992875 taaaataattgggtctcattaactgtcacatcagcattctattagagaattaacagcagggattaattttgataac 11992800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 218
Target Start/End: Complemental strand, 44803485 - 44803382
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    |||||| || ||| |||||||||||| |||||||||||||| ||||  || ||||||||||| |  ||||||||| | | ||||||||||  |||||||     
T  44803485 gacccactagctgtcacatcaacatttcgttagagaattaacaacagagactaattttgatagcagagataaaatataaggattttaaaaatatttaata 44803386  T
Q  215 aaat 218  Q
    ||||    
T  44803385 aaat 44803382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 6621113 - 6621170
Alignment:
Q  181 agataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||||||||| |||||||||| ||||||||||||| || | |||||||||||||||    
T  6621113 agataaaatgtgaggattttaaaa-catttaatgaaatgtagggactattcttcaaagg 6621170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32092434 - 32092472
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  32092434 tgactttgaagaatagtccttacattttgcgtgacttta 32092472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 5029600 - 5029533
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaat 189  Q
    |||||| ||||||| | |||||||||| |||||| | || ||||||||||||||||| || |||||||    
T  5029600 taactgtcacatcagctttccgttagaaaattaacagcagggattaattttgataacaaatataaaat 5029533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 10466681 - 10466639
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatg 78  Q
    |||||| |||||||||||||||| ||||||||||| |||||||    
T  10466681 tttattgaaatgtaaggactatttttcaaagtcacgcaaaatg 10466639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 18152962 - 18152990
Alignment:
Q  1 tgactttgaaaaatagtccttacattttg 29  Q
    |||||||||||||||||||||||||||||    
T  18152962 tgactttgaaaaatagtccttacattttg 18152990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 3e-55; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 2191456 - 2191218
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacct-taaaataattgagacccattaactgccacatc 134  Q
    |||||||||||||||||| |||| ||||||||||  ||||||| | |||| |||||||||||||  | |||||||||||||||||| |||||||||||||    
T  2191456 tttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaattctaaaataattgagacccactaactgccacatc 2191357  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    |  | | ||||| |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||    
T  2191356 agtagttcgttaaagaattaacaacatggactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttc 2191257  T
Q  235 aaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||    |||||||||||  |||||||| |||||||||    
T  2191256 aaaggggcgcaaaatgtaaggactaaaaacatatttaac 2191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 24093395 - 24093157
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| |||||||||| ||||||||||| ||||||| |||||  ||||||||||||| ||||||||||||||  ||| | |||||| ||||||    
T  24093395 tttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaaccttaaaataattggaaccaactaactgtcacatc 24093296  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||||||||||||| |||||||| | |||||||||||||||| || |||||| |||||||||| ||||||||||||| || | ||||||||||    
T  24093295 agcattccgttagagaattaacaacatggactgattttgataacgaagagaagatgtgaggattttaaaaacatttaatgaaatgtagggactattcttc 24093196  T
Q  235 aaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||    ||||| |||||  |||||||| |||||||||    
T  24093195 aaaggggcgcaaagtgtaaggactaaaaacatatttaac 24093157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 21217128 - 21217410
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta----------ttaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaa 90  Q
    |||||||||| ||||||||||||||||||||||||||||          ||||||| ||||||||||| ||||||||||| |||| || || ||| ||||    
T  21217128 tgactttgaagaatagtccttacattttgcgtgactttaaaagcatttattaaaatataaggactattcttcaaagtcacgcaaa-tgtagcgaccaaaa 21217226  T
Q  91 acatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaat 189  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||| |||||||||| ||||||||   || ||| |||||||| |||||  ||||||||    
T  21217227 acatatttaatcttaaaataattgggacccactaactgccacatcagcattccgttaaagaattaacggcagggactaattttgttaacggggataaaat 21217326  T
Q  190 gtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    |||| |||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21217327 gtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaac 21217410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 21265274 - 21264992
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta----------ttaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaa 90  Q
    |||||||||| ||||||||||||||||||||||||||||          ||||||| ||||||||||| ||||||||||| |||| || || ||| ||||    
T  21265274 tgactttgaagaatagtccttacattttgcgtgactttaaaagcatttattaaaatataaggactattcttcaaagtcacgcaaa-tgtagcgaccaaaa 21265176  T
Q  91 acatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaat 189  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||| |||||||||| ||||||||   || ||| |||||||| |||||  ||||||||    
T  21265175 acatatttaatcttaaaataattgggacccactaactgccacatcagcattccgttaaagaattaacggcagggactaattttgttaacggggataaaat 21265076  T
Q  190 gtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    |||| |||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21265075 gtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaac 21264992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 3691317 - 3691120
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||||| |||||||| || ||||||| |||||| |||||||||||||| || ||||||||||| ||||||||||| ||||||| |||||    
T  3691317 aaaatgtaaggactattcttcaaagttacgcaaaatgtagggaccaaaaaacatatttaaccctaaaataattgggacccattaaccgccacattaacat 3691218  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
     |||||||||||||||   || ||| ||||||||||||||  |||||||||||| |||||||||| ||||||||||||| || |||||||||||||||    
T  3691217 cccgttagagaattaactgcagggactaattttgataacggtgataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaa 3691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 21217155 - 21216924
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||  | ||||||||||| || ||||||||||| |||||| ||||||||| |||| ||||    
T  21217155 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataattg-gacccactaactgccatatcagcatt 21217057  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    ||||||||||||||| | || ||| |||||||||||  | ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||      
T  21217056 ccgttagagaattaacagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 21216957  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  |||||||| |||||||||    
T  21216956 gcgcaaaatgtaaggactaaaaagatatttaac 21216924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 21265247 - 21265478
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||  | ||||||||||| || ||||||||||| |||||| ||||||||| |||| ||||    
T  21265247 aaaatgtaaggactattcttcaaagtcacgcaaaatgtagggagcagaaacatatttaaccctaaaataattg-gacccactaactgccatatcagcatt 21265345  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    ||||||||||||||| | || ||| |||||||||||  | ||||||||||||| |||||||||| ||||||||||||| || | ||||||||||||||      
T  21265346 ccgttagagaattaacagcaaggactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 21265445  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  |||||||| |||||||||    
T  21265446 gcgcaaaatgtaaggactaaaaagatatttaac 21265478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 36 - 183
Target Start/End: Original strand, 32861064 - 32861212
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacc-ttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  32861064 tttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaacattaaaataattgagacccactaactgccacatc 32861163  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaaga 183  Q
    || |||||||||||||||||| | |||| | ||||||||||||| ||||    
T  32861164 aatattccgttagagaattaacagcatgaactaattttgataacaaaga 32861212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 55 - 237
Target Start/End: Original strand, 39729476 - 39729659
Alignment:
Q  55 tattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaatt 153  Q
    |||||||||||||||| |||||| ||  ||| || |||||||||| || ||||||||||| || |||||||||| ||||| |||||||||||||||||||    
T  39729476 tattattcaaagtcacgcaaaatacatagactaagaacatatttaaccctaaaataattgggatccattaactgtcacattaacattccgttagagaatt 39729575  T
Q  154 aataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    || ||||| || |||||| ||||||| ||||||||||||| ||||||||||  |||||||||||||||   |||||||||||||    
T  39729576 aacaacatagactaatttcgataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaa 39729659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 237
Target Start/End: Original strand, 24093419 - 24093609
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||| ||| |||||||||||  |||||| |||||| ||||||||||||| || |||||| ||||||||||| ||||| ||| ||||  |||||||||    
T  24093419 taaggacaattcttcaaagtcacgtaaaatgtagggacgaaaaacatatttaaccctaaaatgattgagacccactaactaccatatcagtattccgtta 24093518  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
     |||||||| | |||||| |||||||||||||| ||||||||||| | |||||||||| |||||||| ||||||| | |||||||||||||    
T  24093519 aagaattaagagcatggactaattttgataacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattcttcaaa 24093609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 115 - 239
Target Start/End: Original strand, 3691320 - 3691444
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    |||||| ||||||||||||||||||||||||||| |||||| | |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  3691320 gacccactaactgccacatcaacattccgttagaaaattaacagcatggactaattttgataacggagataaaatgtgaagattttaaaaacatttaatg 3691419  T
Q  215 aaatatatgaactattcttcaaagg 239  Q
    |||| || | |||||||||||||||    
T  3691420 aaatgtagggactattcttcaaagg 3691444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 87 - 269
Target Start/End: Complemental strand, 21182495 - 21182308
Alignment:
Q  87 aaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagata 185  Q
    ||||||| ||||| |||||||||||||| ||| || |||||||||||||| |||| |||||||||||||| ||||  || |||||||||||||  |||||    
T  21182495 aaaaacaaatttaaccttaaaataattgggacacactaactgccacatcagcatttcgttagagaattaacaacagagactaattttgataacagagata 21182396  T
Q  186 aaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||||||| ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21182395 aaatgtgaaaattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 21182308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 239
Target Start/End: Original strand, 10706514 - 10706704
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| || |||||||| ||||||| || ||| |||||  ||||||  | ||||||||||||||| || |||||||||||||||||||| ||||    
T  10706514 taaggactattctttaaagtcacgcaaaatgtagagactaaaaatgtatttaatcctaaaataattgagactcactaactgccacatcaacattctgtta 10706613  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||||| | || ||| || ||||||||||| ||||||||||||| ||||||||||  |||||||||||||||   |||||||||||||||    
T  10706614 gagaattaacagcagggactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatata--gactattcttcaaagg 10706704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 48 - 239
Target Start/End: Complemental strand, 32861040 - 32860849
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||| |||||| |||| |||||| ||||||| |||||| ||||||||||||| ||  |||||||||| |||||| ||||||||||| |||||||||||||    
T  32861040 taagaactattcttcagagtcacgcaaaatgtagggaccaaaaacatatttaacccaaaaataattgggacccactaactgccaca-caacattccgtta 32860942  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||||||||||     |||||||||| ||| ||||||||||| | |||||||||| ||||||||||||||||   |||||| ||||||||    
T  32860941 gagaattaataacaatagctaattttgatcacggagataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaagg 32860849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 105 - 269
Target Start/End: Complemental strand, 2517582 - 2517414
Alignment:
Q  105 aaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    ||||||||  |||||| |||||||||||||| |||||||||| ||| |||| ||||  || |||||||||||||| ||||||||||||| ||||||||||    
T  2517582 aaataattaggacccactaactgccacatcagcattccgttaaagagttaacaacaaagactaattttgataacggagataaaatgtgaggattttaaaa 2517483  T
Q  205 gcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
     ||||||||||||| || | ||||||||||||||    |||||||||||  ||||||||||||||||||    
T  2517482 acatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaaaatatatttaac 2517414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 48 - 237
Target Start/End: Complemental strand, 7083749 - 7083559
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| ||||||||||  ||||||| |||||| ||||||||||||| || ||||||| ||||||| || |||||||||||||| ||||||||||    
T  7083749 taaggattattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaaatagttgagactcactaactgccacatcagcattccgtta 7083650  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    ||||||||| ||||   | || |||| |||| | ||||||||||||| ||||||||||  |||||||||||| || | |||||||||||||    
T  7083649 gagaattaacaacagatactattttttataagggagataaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaa 7083559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 32114399 - 32114167
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||| |||| |||||| |||||| |||| ||||||| |||||| |||||| ||||||| || ||||||||||| || ||| |||| |||||||||||||    
T  32114399 aaaatctaagcactattcttcaaaatcacgcaaaatgtagggaccaaaaaatatatttaaccctaaaataattgggagccactaaccgccacatcaacat 32114300  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag- 238  Q
    |||||||||||||||| |  |  || ||||||||||| |  ||||||||||||| |||||||||| ||||||||  | | || | ||||||||||||||     
T  32114299 tccgttagagaattaacagtagcgactaattttgatatcagagataaaatgtgaggattttaaaaacatttaatagattgtagggactattcttcaaagg 32114200  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      | |||||||||  |||||||| |||||||||    
T  32114199 gcgtaaaatgtaaggactaaaaacatatttaac 32114167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 2606523 - 2606690
Alignment:
Q  52 gactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagaga 150  Q
    ||||||| ||||||||||  ||||||  ||| || |||| ||||||||  ||||||||||||| ||| || |||||||||||||| |||| ||||| |||    
T  2606523 gactattcttcaaagtcatgcaaaatataggaaccaaaatcatatttaatcttaaaataattgggactcactaactgccacatcagcatttcgttaaaga 2606622  T
Q  151 attaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    ||||| | |||||| ||||||||||| || ||||||||| |||  ||||||||| |||||||||||||    
T  2606623 attaacagcatggactaattttgatagcggagataaaatatgagaattttaaaaacatttaatgaaat 2606690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 21267306 - 21267457
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatata 221  Q
    |||||| ||||||| |||||| |||||||||||| | ||  || |||||||||||| ||| ||||||||||| |||||| ||| ||||||||||||| ||    
T  21267306 taactggcacatcagcattccattagagaattaacatcagtgactaattttgataatgaatataaaatgtgaggatttttaaaacatttaatgaaatgta 21267405  T
Q  222 tgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
     | ||||||||||||||    | |||||||||  |||||||| |||||||||    
T  21267406 gggactattcttcaaaggatcgaaaaatgtaaggactaaaaacatatttaac 21267457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 21267296 - 21267181
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcaggga-caaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||||| ||||||||||  ||||||| || || ||||||||||||||| || |||||||| |  ||| || |||||| |||||||||||    
T  21267296 aaaatgtaaggactattcttcaaagtcatgcaaaatgtagagatcaaaaaacatatttaaccctaaaataactaggactcactaactgtcacatcaacat 21267197  T
Q  140 tccgttagagaattaa 155  Q
    || |||||||||||||    
T  21267196 tctgttagagaattaa 21267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 269
Target Start/End: Original strand, 32114410 - 32114560
Alignment:
Q  123 aactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatat 222  Q
    |||| |||||||| |||||| ||| ||||||||  || |||| |||||||||||||  ||||||| |||||  |||||||||  |||||||||||| ||     
T  32114410 aactaccacatcatcattcctttaaagaattaactacgtggactaattttgataacagagataaagtgtgagaattttaaaaatatttaatgaaatgtaa 32114509  T
Q  223 gaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    | |||||||||  |||    |||||||||||  ||||||||||||||||||    
T  32114510 ggactattctttgaagaggcgcaaaatgtaaggactaaaaatatatttaac 32114560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 18107449 - 18107512
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||||||||||||||| |||| || |||||||| |||||||||||||| |||||||||||||    
T  18107449 tttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggactaaaaacatattta 18107512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 39947110 - 39947173
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| |||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||    
T  39947110 tttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatattta 39947173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 39945908 - 39945845
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| |||||||||||||||| ||||||||||| |||||||  ||||| |||||||||||||    
T  39945908 tttattgaaatgtaaggactattgttcaaagtcactcaaaatgttgggaccaaaaacatattta 39945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 23222889 - 23222950
Alignment:
Q  38 tattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||| ||||||||||||||||||| |||||  | ||||||| |||||| |||||||||||||    
T  23222889 tattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatattta 23222950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 36 - 239
Target Start/End: Complemental strand, 107961 - 107757
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||||||||||| |||||| ||||  |||||| |||||| ||||||||||||| |||||||||||||| |||||| |||||| ||||||    
T  107961 tttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaaccttaaaataattgggacccactaactgtcacatc 107862  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||| ||||||||||  ||||| |||||| || | ||||||||||    
T  107861 agcattccgttagagaattaacaacatggactatttttgataacggagataaaatgtgaggattttaaaaatatttattgaaatgtagggactattcttc 107762  T
Q  235 aaagg 239  Q
    |||||    
T  107761 aaagg 107757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 268
Target Start/End: Original strand, 107985 - 108210
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| ||||||||||| ||||||| |||||| ||||||||||||| || ||||||||||| |||||| |||||||||||||| |||||| |||    
T  107985 taaggattattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaaccctaaaataattgggacccactaactgccacatcagcattccatta 108084  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa----ggcaa 242  Q
    ||||||||| | ||  || |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || |||  ||||||||||     ||||    
T  108085 gagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaggaataattcttcaaaagggcgcaa 108184  T
Q  243 aatgtaattactaaaaatatatttaa 268  Q
    |||||||  |||||||| ||||||||    
T  108185 aatgtaaggactaaaaacatatttaa 108210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 42 - 237
Target Start/End: Original strand, 48759972 - 48760168
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    |||||||||| |||||| ||| ||||||||||||||  |||||| ||||||||||||| || ||||||||| | |||||| |||||||||||| ||||||    
T  48759972 aaaatgtaagaactattcttcgaagtcacacaaaatatagggaccaaaaacatatttaaccctaaaataatcgggacccactaactgccacattaacatt 48760071  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    || | |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| | || |||||||||||||||    
T  48760072 ccttcagagaattaacaacatggattaattttgataacagagataaaatgtgaagattttaaaaacatttaatgaattgtacgaactattcttcaaa 48760168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 3296801 - 3297033
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| || |||||||| ||||||  | |||| ||||||||||||| |||||||||||||| |||||| |||||||||||||| ||||    
T  3296801 aaaatgtaaggactattctttaaagtcacgcaaaatatatggaccaaaaacatatttaaccttaaaataattgggacccactaactgccacatcagcatt 3296900  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    | ||||||| ||||||| || ||| |||||||||||||| ||||||||||| | |||||||||| ||||||||||||  || | ||||||||||||||      
T  3296901 ctgttagaggattaatatcagggactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaaggg 3297000  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  ||||||||||||||||||    
T  3297001 tcgcaaaatgtaaggactaaaaatatatttaac 3297033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 51906703 - 51906421
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta----------ttaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaa 90  Q
    |||||||||| ||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||| |||| || |||||| ||||    
T  51906703 tgactttgaagaatagtccttacattttgcgtgactttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaa-tgtagggaccaaaa 51906605  T
Q  91 acatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaat 189  Q
    |||||||||  ||||||||||||| | |||| |||||| |||||||| ||||||||| ||| |||| | || ||| |||||||||||||| |||||||||    
T  51906604 acatatttaatcttaaaataattggggcccactaactgtcacatcaatattccgttaaagagttaacatcagggactaattttgataacggagataaaat 51906505  T
Q  190 gtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    |||| ||| |||||| ||||||||||||  || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  51906504 gtgaggatattaaaaacatttaatgaaacgtagggactattcttcaaagaggcgcaaaatgtaaagactaaaaacatatttaac 51906421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 48554135 - 48553897
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatc 134  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||  |||||| |||||| || | | |||||| ||||||    
T  48554135 tttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaatcttaaactaattgggatctactaactgtcacatc 48554036  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | |||||||||| |||||||| ||||  || |||||||||||||| ||||||||||||| ||||||||||   ||||||||||| |||| ||||||||||    
T  48554035 agcattccgttaaagaattaacaacaatgactaattttgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttc 48553936  T
Q  235 aaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||    |||||||||||  ||||||||  ||||||||    
T  48553935 aaagggacgcaaaatgtaaggactaaaaacgtatttaac 48553897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 51906676 - 51906908
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| ||||||||||  ||||||| |||||| |||| |||||||| || ||||||||||| |||||| |||||  ||||||||||||    
T  51906676 aaaatgtaaggactattcttcaaagtcatgcaaaatgtagggaccaaaatcatatttaaccctaaaataattgcgacccactaactctcacatcaacatt 51906775  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag-- 238  Q
    ||||||||||||||| | ||   | |||||||||||||| ||||||||||||| |||||||||| |||||||||| || || | ||||||||||||||      
T  51906776 ccgttagagaattaacagcagaaactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaagga 51906875  T
Q  239 --gcaaaatgtaattactaaaaatatatttaac 269  Q
      |||||||||||  |||||||| |||||||||    
T  51906876 gcgcaaaatgtaaggactaaaaacatatttaac 51906908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 3296828 - 3296544
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta----------ttaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaa 90  Q
    ||||||| || ||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||| ||||||| |||||  ||||    
T  3296828 tgactttaaagaatagtccttacattttgcgtgactttaaaaacatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaa 3296729  T
Q  91 acatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatgg-attaattttgataacgaagataaaa 188  Q
    | |||||||  | ||||||||||| || ||| |||||||||| |||| ||||||||| |||||||| | || || | |||||||||||||| ||||||||    
T  3296728 atatatttaatcctaaaataattgggatccactaactgccacgtcaatattccgttaaagaattaacatcaggggactaattttgataacggagataaaa 3296629  T
Q  189 tgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||| |||||||||| ||||||||||||| || | | ||||||||||||    |||||||||||  |||||||| |||||||||    
T  3296628 tgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 36 - 239
Target Start/End: Original strand, 1791399 - 1791603
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||||||||||| ||||||||||| ||||| | |||| | ||||||||||||| ||||||||||||||  || || |||||||||||||    
T  1791399 tttattgaaatgtaaggactatttttcaaagtcacgcaaaacgtaggggccaaaaacatatttaaccttaaaataattggaacacactaactgccacatc 1791498  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    ||||||| ||||||||||||| | ||  || ||||||| |||||| ||||||||||| |||||||||||| |||||||| |||| |  |||||||| |||    
T  1791499 aacattcagttagagaattaacagcagagactaattttaataacggagataaaatgtaaagattttaaaaacatttaataaaatgtgagaactatttttc 1791598  T
Q  235 aaagg 239  Q
    |||||    
T  1791599 aaagg 1791603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 36 - 239
Target Start/End: Original strand, 29691763 - 29691967
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||| ||||||| || |||||||| ||||||| | |||| ||||||||||||| ||  |||||||||| |||||| ||||| |||||||    
T  29691763 tttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaacccaaaaataattgggacccactaactaccacatc 29691862  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    ||| |||||||||||||||||   |||||| |||||||||||||  ||||||||||||| ||||||||||  |||||||||||||||  ||||||| |||    
T  29691863 aacgttccgttagagaattaaccgcatggactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaatataaaaactattattc 29691962  T
Q  235 aaagg 239  Q
    |||||    
T  29691963 aaagg 29691967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 26168255 - 26168483
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| || |||||||||||||||||| || ||||||||| |||  || |||     
T  26168255 taaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaaccctaaaataattgagacccactacctgccacattaacggtctgttt 26168354  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatga--actattcttcaaag----gc 240  Q
    ||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||| || |||||||| |||| || ||  |||||||| |||||    ||    
T  26168355 gagcattaataacatggactaattttgataacaaagataaaatgtggagattttagaaacatttaataaaatgtaggaggactattctacaaaggggcgc 26168454  T
Q  241 aaaatgtaattactaaaaatatatttaac 269  Q
    |||||||||  | |||||| |||||||||    
T  26168455 aaaatgtaaggattaaaaacatatttaac 26168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 34129228 - 34128995
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||| ||||||||| ||||||||||||| ||||||| | |||| ||||||||||| || || ||||||||||| |||||||||||  |||||| | |||    
T  34129228 aaaatataaggactactattcaaagtcacgcaaaatgtatggaccaaaaaacatatctaaccataaaataattgggacccattaaccaccacattagcat 34129129  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag- 238  Q
     ||||||||||||||| ||||| || ||| |||||||||||||||||||| |||  ||||||||| | |||||| ||||||| | ||||||||||||||     
T  34129128 cccgttagagaattaacaacatagactaactttgataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaagg 34129029  T
Q  239 ---gcaaaatgtaattactaaaaatatatttaac 269  Q
       |||||||||||||| || ||| |||||||||    
T  34129028 gacgcaaaatgtaattattagaaacatatttaac 34128995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 30952880 - 30953035
Alignment:
Q  64 aagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatg 162  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||  |||||| |||| ||||||||||||||| ||||||||||||| |||| |    
T  30952880 aagtcacacaaaatgcagggaccaaaaacatatttaaccttaaaataattaggacccactaaccgccacatcaacattctgttagagaattaacaacaag 30952979  T
Q  163 gattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    || ||||||| |||||  ||||||||||| | |||||||||| |||||||||||||    
T  30952980 gactaattttaataaccgagataaaatgttaggattttaaaaacatttaatgaaat 30953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 269
Target Start/End: Original strand, 7118019 - 7118253
Alignment:
Q  38 tattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttaccttaaaataattgagacccattaactgccacatcaac 137  Q
    |||| |||| ||||||||||| ||||||||| | ||||||| ||| || ||||||||||||| | | ||||||||| ||| || |||||||||||| | |    
T  7118019 tattgaaatttaaggactatttttcaaagtcgcgcaaaatgtagg-accaaaaacatatttaaccttaaataattgggactcactaactgccacattagc 7118117  T
Q  138 attccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    |||| | ||||||||||| | |||||| |||||||||||| | ||||||||| |||  ||||||||| ||||||||||||| |||| |||||||||||||    
T  7118118 attctgatagagaattaacagcatggactaattttgataatggagataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaa 7118217  T
Q  238 g----gcaaaatgtaattactaaaaatatatttaac 269  Q
    |    |||||||||||  |||||||| |||||||||    
T  7118218 ggggcgcaaaatgtaaggactaaaaacatatttaac 7118253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 30608490 - 30608687
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| || |||||||| ||||||  |||||| |||||||||||||  | ||||||||||| ||  || ||||||||||| || ||||    
T  30608490 aaaatgtaaggactattcttaaaagtcacgcaaaatctagggaccaaaaacatatttaatcctaaaataattgggattcactaactgccacagcagcatt 30608589  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    |||||| | |||||| ||||  || |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||   ||||||||||||||    
T  30608590 ccgttaaataattaacaacagtgactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaag 30608687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 36 - 218
Target Start/End: Original strand, 35166718 - 35166900
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatc 134  Q
    ||||||||||||||||||||||| |||||||||  | |||||| |||||| ||| |||||||||  | ||||||||||||||| || |||||| ||||||    
T  35166718 tttattaaaatgtaaggactattcttcaaagtcgtataaaatgtagggacgaaagacatatttaatcataaaataattgagactcactaactgtcacatc 35166817  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    | | ||||||||||||||||| | ||  || |||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  35166818 agc-ttccgttagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaat 35166900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 237
Target Start/End: Complemental strand, 5545011 - 5544821
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||  ||||||| |||||| ||||||||||||| || ||||||| ||  |||||| |||||||||||||||||||||||||    
T  5545011 taaggactattcttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaaatatttacgacccactaactgccacatcaacattccgtta 5544912  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
     | |||||| |  ||||| ||||||  |||| | |||||||||||||  |||||||||  ||||||||||||||| |||||||||||||||    
T  5544911 aaaaattaacagtatggactaatttgaataaaggagataaaatgtgagaattttaaaaatatttaatgaaatataggaactattcttcaaa 5544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 259
Target Start/End: Complemental strand, 26168231 - 26168004
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| |||||||||| |  ||||| || ||||||| |||||  ||||||||||||| |||||||||||||| |||||| |||||| ||||||    
T  26168231 tttattgaaatgcaaggactattttctaaagtaacgcaaaatgtagggatcaaaaacatatttaaccttaaaataattgggacccactaactgtcacatc 26168132  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||||||||||||| | ||  || |||||||||||||| ||||||||||||| ||||||||||  ||||||| |||| ||  ||||||||||     
T  26168131 agcattccgttagagaattaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaatatttaat-aaatgtagaaactattcttt 26168033  T
Q  235 aaa----ggcaaaatgtaattactaaaaa 259  Q
    |||     |||||||||||| ||||||||    
T  26168032 aaaagggcgcaaaatgtaatgactaaaaa 26168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 29691727 - 29691562
Alignment:
Q  72 caaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaatt 170  Q
    ||||||| |||||| ||||||||||||| || ||||||||||| || ||| |||||| |||||||||||||| |||||||||||| |  |  || |||||    
T  29691727 caaaatgtagggactaaaaacatatttaaccctaaaataattg-gatccactaactgtcacatcaacattccattagagaattaacagtagagactaatt 29691629  T
Q  171 ttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||| || | |||||||||||||    
T  29691628 ttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 29691562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 30608448 - 30608282
Alignment:
Q  72 caaaatgcagggacaaaaaacatattt-accttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaatt 170  Q
    ||||||| |||||| |||||||||||| ||| ||||||||||| | |||| ||||||||||||||| || | ||||||||||||||| ||  || |||||    
T  30608448 caaaatgtagggaccaaaaacatatttgaccctaaaataattgggtcccactaactgccacatcaatatcctgttagagaattaatagcagagactaatt 30608349  T
Q  171 ttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    ||||||||| ||||||||||||| ||||||||||  || ||||||||| || | |||||||||||||    
T  30608348 ttgataacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaa 30608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 266
Target Start/End: Original strand, 56106376 - 56106547
Alignment:
Q  99 accttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagatt 198  Q
    ||||||||||||||| |||||| ||| || ||||||||||||  ||||||||||||| | || ||| ||||||| |||||| |||||||||| || ||||    
T  56106376 accttaaaataattgggacccactaattgtcacatcaacattatgttagagaattaacatcagggactaattttaataacggagataaaatgagaggatt 56106475  T
Q  199 ttaaaagcatttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatattt 266  Q
    |||||| |||||||| ||||||| |||||||||||||||||    ||||||||||  |||||||| ||||||    
T  56106476 ttaaaaacatttaataaaatataggaactattcttcaaaggggcacaaaatgtaaagactaaaaacatattt 56106547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 48 - 238
Target Start/End: Complemental strand, 1791375 - 1791184
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||| ||||||| | |||| ||||||||||||| ||  |||||||||| || ||| || | ||||||| | ||||||||||    
T  1791375 taaggactattcttcaaagtcacgcaaaatgtaaggactaaaaacatatttaacccaaaaataattgggatccactaccggccacattagcattccgtta 1791276  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    ||||||||| ||||| || |||||||||||||    ||||| | ||| |||||| ||| ||||||||||||| |||| ||||||||||||||    
T  1791275 gagaattaacaacatcgactaattttgataacaggtataaagtttgaggatttttaaaacatttaatgaaatgtatggactattcttcaaag 1791184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 35468941 - 35469115
Alignment:
Q  63 aaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacat 161  Q
    |||||||| ||||||| |||| | ||||||||||||| |||||||||||||| || ||  |||||| |||| ||  ||||||||| |||||||| |||||    
T  35468941 aaagtcacgcaaaatgtaggggctaaaaacatatttaaccttaaaataattgggatccgctaactgtcacagcagtattccgttaaagaattaacaacat 35469040  T
Q  162 ggattaattttgataacgaagat-aaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaa 236  Q
    |||||||||||||||||| |||| ||||| ||| |||||||||| | ||||||||||| || | | ||||||||||    
T  35469041 ggattaattttgataacggagataaaaatttgaggattttaaaaac-tttaatgaaatgtaaggattattcttcaa 35469115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 34129231 - 34129353
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    ||||| ||||||| ||||||| ||||||||| ||||||||| | | |||| |||||||||||||  ||||||||||||| ||||||||||  ||||||||    
T  34129231 gacccgttaactgtcacatcagcattccgttggagaattaacagcttggactaattttgataacagagataaaatgtgaggattttaaaaatatttaatg 34129330  T
Q  215 aaatatatgaactattcttcaaa 237  Q
    |||| || | |||||||||||||    
T  34129331 aaatgtagggactattcttcaaa 34129353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 30047961 - 30048071
Alignment:
Q  129 cacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaacta 228  Q
    |||||||||||||||||||| |||||| ||||  || ||||||| |||||| ||||||||| ||| ||||||||||  |||||||||||| || |||||     
T  30047961 cacatcaacattccgttagataattaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactg 30048060  T
Q  229 ttcttcaaagg 239  Q
    |||||||||||    
T  30048061 ttcttcaaagg 30048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 30062302 - 30062412
Alignment:
Q  129 cacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaacta 228  Q
    |||||||||||||||||||| |||||| ||||  || ||||||| |||||| ||||||||| ||| ||||||||||  |||||||||||| || |||||     
T  30062302 cacatcaacattccgttagataattaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactg 30062401  T
Q  229 ttcttcaaagg 239  Q
    |||||||||||    
T  30062402 ttcttcaaagg 30062412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 10580106 - 10580024
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaataattgagac 117  Q
    |||||| |||||||||||||||| ||||||||||| ||||||| | |||| |||||||||||| |||||||||||||||||||    
T  10580106 tttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaaccttaaaataattgagac 10580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 269
Target Start/End: Complemental strand, 41510224 - 41510069
Alignment:
Q  118 ccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaa 217  Q
    |||||||||| || |||| |||| |||||||||||||| ||||  || |||||||||||| | ||||||||| ||| ||||||| ||  ||||||| |||    
T  41510224 ccattaactgtcatatcagcatttcgttagagaattaacaacagtgactaattttgataagggagataaaatatgaggattttagaaatatttaataaaa 41510125  T
Q  218 tatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    | || | ||||||||||||||    |||||||||||  | ||||||||||||||||    
T  41510124 tgtagggactattcttcaaaggggcgcaaaatgtaaggattaaaaatatatttaac 41510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 5545035 - 5545199
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||||||| |||||| ||||||||||| ||||||| ||| |  |||||||||||| || |||||||||||  ||  || |||||  ||| ||    
T  5545035 tttattgaaatgtaagaactatttttcaaagtcacgcaaaatgtaggaagcaaaaacatatttaactttaaaataattaggattcactaactatcacttc 5545134  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagatttt 200  Q
    |   ||| ||||||||||||| ||||  || |||||||||||||| ||||||||||||| ||||||    
T  5545135 agtgttctgttagagaattaacaaca-agactaattttgataacggagataaaatgtgaggatttt 5545199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 25916974 - 25917091
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgata--acgaagataaaatgtgaagattttaaaagcatttaatgaaata 219  Q
    |||||| ||||||| |||| |||||||||||||| | ||   | ||||||| |||  ||||||||||||| |||| ||||||||| |||||||||||||     
T  25916974 taactgtcacatcagcatttcgttagagaattaaaagcagacactaattttcataacacgaagataaaatatgaaaattttaaaaacatttaatgaaatg 25917073  T
Q  220 tatgaactattcttcaaa 237  Q
    |||| | |||||||||||    
T  25917074 tatggattattcttcaaa 25917091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 38759807 - 38759705
Alignment:
Q  171 ttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatattt 266  Q
    ||||||||| ||||||||| ||| |||||||||| ||||||||||||| |||  ||||||||||||||    ||||||| |||  |||||||| ||||||    
T  38759807 ttgataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaagaggcgcaaaatttaaggactaaaaaaatattt 38759708  T
Q  267 aac 269  Q
    |||    
T  38759707 aac 38759705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 49426376 - 49426439
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| ||||||||||||||||||| |||||    ||||||| ||||||||||||||||||||    
T  49426376 tttattgaaatgtaaggactattatttaaagtagagcaaaatgtagggacaaaaaacatattta 49426439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 10580130 - 10580203
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacct-taaaataattgagaccca 120  Q
    |||||| |||| ||||||||||| ||||||| | |||||||||||||||||| || ||||| ||||| ||||||    
T  10580130 taaggattattcttcaaagtcactcaaaatgtaaggacaaaaaacatatttaactctaaaaaaattgggaccca 10580203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 155
Target Start/End: Complemental strand, 19310935 - 19310851
Alignment:
Q  72 caaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaattaa 155  Q
    ||||||| |||||  |||||||||||||  ||||||||||||| |||||| |||||  |||||||||||||| ||| ||| ||||    
T  19310935 caaaatgtagggatcaaaaacatatttaaacttaaaataattgggacccactaactatcacatcaacattccattaaagagttaa 19310851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 34294536 - 34294453
Alignment:
Q  188 atgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatatttaac 269  Q
    ||||||||||||||||| ||||||||||||| || | ||||||||||||| |    ||||||||||  ||||||||||||||||||    
T  34294536 atgtgaagattttaaaaacatttaatgaaatgta-ggactattcttcaaatggacacaaaatgtaa-gactaaaaatatatttaac 34294453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 17287553 - 17287490
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| ||||||||||||||||||| |||||  | ||||||| |||||| || ||||||||||    
T  17287553 tttattgaaatgtaaggactattatttaaagtagcgcaaaatgtagggactaataacatattta 17287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 17288397 - 17288460
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| ||||||| |||||||||||||||||  | ||||||| |||||| || ||||||||||    
T  17288397 tttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatattta 17288460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 54142424 - 54142361
Alignment:
Q  175 taacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    ||||| ||| ||||||| | |||||||||| |||||| |||||| |||| ||||||||||||||    
T  54142424 taacggagagaaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaag 54142361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 54168847 - 54168910
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||||||||||| ||| |||| ||||||||||| ||||||  |||||  |||||||||||||    
T  54168847 tttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatattta 54168910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30608517 - 30608479
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta 39  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  30608517 tgacttttaagaatagtccttacattttgcgtgacttta 30608479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 34397756 - 34397718
Alignment:
Q  166 taattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  34397756 taattttgataacgaagataaaatatgaggattttaaaa 34397718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 41510230 - 41510284
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatat 96  Q
    ||||||||||||||||| ||||||||||  |||||||||||  ||||||| ||||    
T  41510230 aaaatgtaaggactattcttcaaagtcaagcaaaatgcaggaccaaaaaaaatat 41510284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 26984237 - 26984180
Alignment:
Q  181 agataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    ||||||||||||| |||||||||| |||||||| || | || | ||||||||||||||    
T  26984237 agataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaag 26984180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 7e-53; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 36 - 269
Target Start/End: Original strand, 3591188 - 3591426
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||||||||||| ||||||||||| || |||| |||||| ||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  3591188 tttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaaccttaaaataattgggacccactaactgccacatc 3591287  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    |  ||||||||||| |||| | | || ||| ||||||| |||| | ||||||||||||| |||||||||| |||||||| |||| |||| ||||||||||    
T  3591288 aggattccgttagataatttacagcagggactaatttttataatggagataaaatgtgaggattttaaaaacatttaataaaatgtatggactattcttc 3591387  T
Q  235 aaa----ggcaaaatgtaattactaaaaatatatttaac 269  Q
    |||     |||||||||||  ||||||||||||||||||    
T  3591388 aaatgagcgcaaaatgtaaggactaaaaatatatttaac 3591426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 19895639 - 19895437
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| || ||||||| ||||||||||| ||||||  || ||| ||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  19895639 tttattgaaatgcaaagactatttttcaaagtcacgcaaaatatagagaccaaaaacatatttaaccataaaataattgagactcattaactgccacatc 19895540  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | |||||||||| |||||||| |  || || |||||||||||||| ||||||||||||| | |||||||| |||||||| |||| |||| ||||||||||    
T  19895539 agcattccgttaaagaattaacagtatagactaattttgataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggactattcttc 19895440  T
Q  235 aaa 237  Q
    |||    
T  19895439 aaa 19895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 50359291 - 50359492
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||||||||||| ||||||||||| || |||| |||||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  50359291 tttattgaaatgtaaggactatttttcaaagtcacgcagaatgtagggaccaaaaacatatttaaccttaaaataattgggacccat-aactgccacatc 50359389  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | |||||||||| |||  ||| | ||  || |||||||||||||  ||||||||||||| |||||||||| |||||||||||||| | | ||||||||||    
T  50359390 agcattccgttaaagacataaaagcagagactaattttgataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggactattcttc 50359489  T
Q  235 aaa 237  Q
    |||    
T  50359490 aaa 50359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 9880718 - 9880485
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||||| |||||||| || ||||||| |||||| |||||||||||||| || ||||||||||||||| || |||| ||||||||| |||    
T  9880718 aaaatgtaaggactattcttcaaagtaacgcaaaatgtagggaccaaaaaacatatttaaccctaaaataattgagactcactaaccgccacatcagcat 9880619  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag- 238  Q
    ||    | |||||||| ||||  || |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||   ||| ||||||||||     
T  9880618 tcatacatagaattaacaacagtgactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagg 9880519  T
Q  239 ---gcaaaatgtaattactaaaaatatatttaac 269  Q
       |||||||||||  |||||||| |||||||||    
T  9880518 gatgcaaaatgtaaggactaaaaacatatttaac 9880485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 4288296 - 4288470
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta--ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    |||||| |||||||  | || ||||||||  |||||| |||||| |||||||||||||  ||| |||||||||| |||||| |||||| |||||||||||    
T  4288296 aaaatgcaaggactgctctttaaagtcacgtaaaatgtagggaccaaaaacatatttaatcctaaaaataattgtgacccactaactgacacatcaacat 4288395  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatg 214  Q
    ||||||| |||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  4288396 tccgttaaagaattaacagcatggattaattttgataacgaatataaaatgtgaggattttaaaaacatttaatg 4288470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 48155135 - 48155334
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcaggga-caaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||||| |||||| |||| ||||||| |   | ||||||||||||||| || ||||| |||| |||| || |||||| || |||| |||    
T  48155135 aaaatgtaaggactatttttcaaaatcacgcaaaatgtaaaaatcaaaaaacatatttaaccctaaaacaattaagactcactaactgtcaaatcagcat 48155234  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||| |||||||| |||| ||| |||||||||||||  |||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  48155235 tccgttaaagaattaacaacaaggactaattttgataacatagataaaatgtgaagattttaaaaacatttaatgaaatataggaacaattcttcaaagg 48155334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 238
Target Start/End: Original strand, 18180142 - 18180332
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttaccttaaaataattgagacccattaactgccacatcaacattccgttag 147  Q
    |||||| |||| ||||||||||| ||||||| | |||| ||||||||||| ||| ||||||||||| | | ||||||||| || |||| |||||||||||    
T  18180142 taaggattattcttcaaagtcacgcaaaatgtaaggactaaaaacatattaaccctaaaataattggggctcattaactgacatatcagcattccgttag 18180241  T
Q  148 agaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    |||||||| | ||  || |||||||||||||| ||||||||| ||| |||||||||| |||||||| |||| |||| ||||||||||||||    
T  18180242 agaattaacaccactgactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaag 18180332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 44 - 237
Target Start/End: Original strand, 31436242 - 31436436
Alignment:
Q  44 aatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacct-taaaataattgagacccattaactgccacatcaacattcc 142  Q
    ||||| ||||||||| |||||||||||  |||||| ||||||  |||||||||| | || ||||||||||| ||||||||||||| ||||||| ||||||    
T  31436242 aatgttaggactattcttcaaagtcacgtaaaatgtagggaccgaaaacatattgaactctaaaataattgggacccattaactgtcacatcatcattcc 31436341  T
Q  143 gttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    ||||||||||||| | ||  || |||||||||||||| |||||||||||||  ||||||||| |||||||| |||||||   |||||||||||||    
T  31436342 gttagagaattaacagcagagactaattttgataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgactattcttcaaa 31436436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 18180118 - 18179880
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| ||||||| || ||||||||||| ||||||| || ||| ||||||||||||| |||||||||||||| |||||| ||| || ||||||    
T  18180118 tttattgaaatgcaaggactgtttttcaaagtcacgcaaaatgtagtgactaaaaacatatttaaccttaaaataattgggacccactaattgtcacatc 18180019  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | |||||||||||| |||||  |  |  || |||||||||||||| ||||||||||||| |||||||||| || ||||||||||||| | |||||| |||    
T  18180018 agcattccgttagaaaattagcagtagagactaattttgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttc 18179919  T
Q  235 aaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||    |||||||||||  |||||||| || ||||||    
T  18179918 aaaggggtgcaaaatgtaaggactaaaaacatgtttaac 18179880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 47541670 - 47541553
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatata 221  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||    
T  47541670 taactgccacatcagcattccgttagagaattaacaacagggattaattttgataatgaatataaaatgtgaggattttaaaaacatttaatgaaatata 47541571  T
Q  222 tgaactattcttcaaagg 239  Q
     | |||||||||||||||    
T  47541570 gggactattcttcaaagg 47541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 5172984 - 5172746
Alignment:
Q  36 tttattaaaatgtaa-ggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacat 133  Q
    ||||||||||||||| |||||||| || |||||||| ||||||| ||| |  ||||||||||| | |||||||||||||| ||| || ||||| | ||||    
T  5172984 tttattaaaatgtaaaggactattctttaaagtcacgcaaaatgtaggaatcaaaaacatattgaaccttaaaataattgggactcactaactac-acat 5172886  T
Q  134 caacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattctt 233  Q
    ||||||||  |||||||||||| |||| ||| ||| |||||||||| ||||||||||| | |||||||||| ||||||||||||| ||   |||||||||    
T  5172885 caacattctattagagaattaacaacaaggactaaatttgataacgtagataaaatgtaaggattttaaaaacatttaatgaaatgtagagactattctt 5172786  T
Q  234 caaa----ggcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||     |||||||||||  |||||||| |||||||||    
T  5172785 caaatgagcgcaaaatgtaagaactaaaaacatatttaac 5172746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 42 - 238
Target Start/End: Complemental strand, 6751281 - 6751083
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    |||||||||| |||||| |||||||| || ||||||  || ||| |||||||||||||| |||||| ||||||| |||||| ||||||||| |||| |||    
T  6751281 aaaatgtaagaactattcttcaaagttacgcaaaatatagagaccaaaaaacatatttaaccttaatataattgggacccactaactgccatatcagcat 6751182  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    || ||||||||||||| | |  ||| |||||||||||||| |||||||||| || |||||| ||| |||||||||||||||| | | ||||||||||||    
T  6751181 tctgttagagaattaacatcggggactaattttgataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaag 6751083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 237
Target Start/End: Original strand, 19895663 - 19895853
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacct-taaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| |||||||||   ||||||| |||||  ||||| ||||||| || ||||||||||| ||| || |||||| ||||||||||||| ||||    
T  19895663 taaggactattcttcaaagtcttgcaaaatgtagggatcaaaaatatatttaactctaaaataattgtgacacactaactgtcacatcaacattctgtta 19895762  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    ||||||||| ||||  || |||||||||||||||||||||||| |||  ||||||||| |||||||| |||| ||   |||||||||||||    
T  19895763 gagaattaacaacaaagactaattttgataacgaagataaaatatgagaattttaaaaacatttaataaaatgtagagactattcttcaaa 19895853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 5683400 - 5683162
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacc-ttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| |||||| ||| |||||| |||| ||||||| || ||| || || ||||||| | |||||||||||| |||||| |||||| || |||    
T  5683400 tttattgaaatgcaaggacaatttttcaaattcacgcaaaatgtagagaccaataatatatttaacattaaaataattgggacccactaactgtcatatc 5683301  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||| ||||||||| ||| | || ||| |||||||||||| ||||||||||||||| |||||||||  ||||||||||||| || | |||||| |||    
T  5683300 agcattctgttagagaaataacagcagggactaattttgataatgaagataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttc 5683201  T
Q  235 aaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||    |||||||||||  | |||||| |||||||||    
T  5683200 aaagagacgcaaaatgtaaggattaaaaacatatttaac 5683162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 41 - 211
Target Start/End: Original strand, 47541679 - 47541851
Alignment:
Q  41 taaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaaca 138  Q
    |||||||||||||||||| || ||||| || ||||||  |||||| ||||||||||||||  | ||||||||||| ||||||  ||| ||||||||||||    
T  47541679 taaaatgtaaggactattctttaaagttacgcaaaatagagggaccaaaaaacatatttaatcctaaaataattgggacccaccaaccgccacatcaaca 47541778  T
Q  139 ttccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcattta 211  Q
    |||||||  | |||||| |||| ||| |||||||||||||| ||||||||||||| |||||||||| ||||||    
T  47541779 ttccgtttaataattaacaacaaggactaattttgataacggagataaaatgtgaggattttaaaaacattta 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 268
Target Start/End: Complemental strand, 19976336 - 19976166
Alignment:
Q  102 ttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagatttta 201  Q
    |||||||||||| ||||||||||| | |||||||| |||  |||||| |||||| |||| ||||||||||||||||   ||||||||||||  |||||||    
T  19976336 ttaaaataattgcgacccattaaccgtcacatcaatattttgttagataattaacaacaaggattaattttgataatagagataaaatgtggggatttta 19976237  T
Q  202 aaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaa 268  Q
    ||| |||||||| ||| ||| ||||||||||||||||    |||||||||||  |||||||| ||||||||    
T  19976236 aaaacatttaataaaaaataagaactattcttcaaagaagcgcaaaatgtaacgactaaaaacatatttaa 19976166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 55 - 237
Target Start/End: Original strand, 5683431 - 5683614
Alignment:
Q  55 tattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaatt 153  Q
    |||| |||||||||||  |||||| |||||| |||||||||||||  |||||||||||||  | ||| |||||| ||||| |||||||||||||| ||||    
T  5683431 tattcttcaaagtcacgtaaaatgtagggactaaaaacatatttaatcttaaaataattggtatccactaactgtcacattaacattccgttagaaaatt 5683530  T
Q  154 aataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
    || | ||  || ||||||||||| || |||||||||  || ||||||||||  |||||||||||| || | |||||||||||||    
T  5683531 aacagcagtgactaattttgataccggagataaaatacgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 5683614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 50359293 - 50359165
Alignment:
Q  105 aaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||||||| | ||  | | ||||||||||||| | ||||||||||||||||| ||||    
T  50359293 aaataattgggacccacgaactgccacatcaacattccgttagagaattaacagcagagct-aattttgataacggaaataaaatgtgaagatttaaaaa 50359195  T
Q  205 gcatttaatgaaatatatgaactattcttc 234  Q
     ||||||||||||| || | ||||||||||    
T  50359194 acatttaatgaaatgtagggactattcttc 50359165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 6751291 - 6751443
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatata 221  Q
    |||||| |||||||||||||| |||||||||||| | ||  || ||||||||||||| |||||||||||||| ||||||||||  |||||||||||| ||    
T  6751291 taactgtcacatcaacattccattagagaattaacagcagagactaattttgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaatgta 6751390  T
Q  222 tgaactattcttcaaagg-----caaaatgtaattactaaaaatatatttaac 269  Q
     | ||| ||||| |||||     ||||||||||| |||||||| |||||||||    
T  6751391 aggacttttctttaaagggacgccaaaatgtaatgactaaaaacatatttaac 6751443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 9880736 - 9880843
Alignment:
Q  130 acatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactat 229  Q
    |||||| ||||||||||||||||||| | || ||| |||||||||||||  |||||||||||||  ||||||||| |||||||| |||||||  ||||||    
T  9880736 acatcagcattccgttagagaattaacagcagggactaattttgataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactat 9880835  T
Q  230 tcttcaaa 237  Q
    ||||||||    
T  9880836 tcttcaaa 9880843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 239
Target Start/End: Original strand, 42723186 - 42723314
Alignment:
Q  115 gacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcattt---- 210  Q
    ||||||||||||||||||||| |||||| ||||| |||||| |||||  | |||||||| ||||| | ||||||||||| |||||||||| |||||        
T  42723186 gacccattaactgccacatcagcattccattagataattaacaacataaactaattttgctaacggatataaaatgtgaggattttaaaaacatttaata 42723285  T
Q  211 aatgaaatatatgaactattcttcaaagg 239  Q
    ||| ||||||||||| ||||||| |||||    
T  42723286 aattaaatatatgaattattctttaaagg 42723314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 42723184 - 42723084
Alignment:
Q  41 taaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaataattgagacccattaactgccacatcaacat 139  Q
    |||||| ||| ||||||| ||||||||||  ||||||| ||||||||||||||||||| ||| |||||||| || |||| | |||| |||||||||||||    
T  42723184 taaaatataaagactattcttcaaagtcaagcaaaatgtagggacaaaaaacatatttaaccctaaaataaatgggacctactaaccgccacatcaacat 42723085  T
Q  140 t 140  Q
    |    
T  42723084 t 42723084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 48155125 - 48155014
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatata 221  Q
    |||||| |||||||||| ||||||| ||| |||| | ||  |||||||||||||| || ||||||||| ||| |||||||||| |||||||| |||| ||    
T  48155125 taactgtcacatcaacaatccgttacagacttaagagcagagattaattttgatatcggagataaaatatgaggattttaaaaacatttaataaaatgta 48155026  T
Q  222 tgaactattctt 233  Q
     | |||||||||    
T  48155025 aggactattctt 48155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 36793598 - 36793661
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    ||||||||||||||  ||||||| ||||||||||| ||||||  |||||| |||||||||||||    
T  36793598 tttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatattta 36793661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 37717819 - 37717891
Alignment:
Q  35 ctttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaa 107  Q
    ||||||| |||||||||||||||| ||||||||  |  |||||| |||||| |||||||||||| |||||||||    
T  37717819 ctttattgaaatgtaaggactatt-ttcaaagttgcgtaaaatgtagggactaaaaacatatttaaccttaaaa 37717891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 275 - 383
Target Start/End: Original strand, 4116614 - 4116722
Alignment:
Q  275 atataccttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattgacaatgattcaaacat 374  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4116614 atataacttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattgacaatgattcaaacat 4116713  T
Q  375 ggtgacaaa 383  Q
    |||||||||    
T  4116714 ggtgacaaa 4116722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 17157779 - 17157547
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||| || ||||||||||| |||||| ||||| |||||||| ||||    
T  17157779 aaaatgtaaggactattcttcaaagtcacacaaaatgtagggatcaaaaacatatttaaccctaaaataattgggacccactaactaccacatcagcatt 17157680  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaa--ag 238  Q
     |||||||||||||| | ||  || ||||||||||||   ||||||||||||| ||||||||||  |||||||||||| |||| ||||||||||||  ||    
T  17157679 tcgttagagaattaacagcagtgactaattttgataatagagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaatgag 17157580  T
Q  239 gc--aaaatgtaattactaaaaatatatttaac 269  Q
    ||  |||||||||  |||||||| |||||||||    
T  17157579 gcgtaaaatgtaagaactaaaaacatatttaac 17157547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 80 - 269
Target Start/End: Original strand, 8710236 - 8710429
Alignment:
Q  80 agggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataac 178  Q
    |||||| ||||||||||||| || ||||||||||||||| || ||| || ||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  8710236 agggaccaaaaacatatttagccctaaaataattgagacacactaattgtcacatcaacattccgttagagaattaacaacatggactaattttaataac 8710335  T
Q  179 gaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||| ||||||||||  |||||||||| ||||||||||||| || | ||||||||||||||    ||||||| |||  |||||||| |||||||||    
T  8710336 gaa-ataaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaac 8710429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 275 - 403
Target Start/End: Complemental strand, 4043073 - 4042936
Alignment:
Q  275 atataccttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagat---------tgacaatga 365  Q
    ||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||    
T  4043073 atataacttataagcatattgatgtgttgtgaatttgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattcacaatggtgacaatga 4042974  T
Q  366 ttcaaacatggtgacaaagaccttagaagggaagattt 403  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  4042973 ttcaaacatggtgacaaagaccttagaagagaaaattt 4042936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 7645845 - 7646071
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| ||||||||||  |||||||  ||||| ||||||||||||| || ||||||||||| |||| | ||| || ||||||||||||||||||    
T  7645845 taaggattattcttcaaagtcaagcaaaatgtcgggaccaaaaacatatttaaccctaaaataattgggacctactaattgtcacatcaacattccgtta 7645944  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg----caa 242  Q
    || |||||| | || ||| |||||||||||||| |||||||||||||  ||||| ||| |||||| |||||| || | |||||||||||||||    |||    
T  7645945 gaaaattaacagcagggactaattttgataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggactattcttcaaaggagcacaa 7646044  T
Q  243 aatgtaattactaaaaatatatttaac 269  Q
    |||||||  |||||||| |||||||||    
T  7646045 aatgtaaggactaaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 21113268 - 21113067
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||| ||||| || ||||||| ||||||||||| ||||| | |||||  ||| ||||||||| |||||||||||||| ||| || |||||||||||||    
T  21113268 tttattgaaatgcaatgactatttttcaaagtcacgcaaaacgtagggatcaaagacatatttaaccttaaaataattgggactcactaactgccacatc 21113169  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||||||||||||| | ||  || |||||||||||| | |||||||||||||  ||||||||| ||||||||||||| ||   ||||||||||    
T  21113168 agcattccgttagagaattaacagcagagactaattttgataaaggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattcttc 21113069  T
Q  235 aa 236  Q
    ||    
T  21113068 aa 21113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 1869672 - 1869507
Alignment:
Q  41 taaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    |||||||| ||||||||| || ||||||| | |||||| ||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  1869672 taaaatgtgaggactattttttaaagtcatataaaatgtagggaaaaaaaacatatttaaccttaaaataattgagacccattaaccaccacatcaacat 1869573  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||||||||||||             |||||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  1869572 tccgttagagaat-------------taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaat 1869507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 269
Target Start/End: Complemental strand, 5974206 - 5974012
Alignment:
Q  80 agggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataac 178  Q
    |||||| ||||||||||||| || ||||||||||||||| |  ||| || ||||||| ||||||||||||||||||| |||||||| ||||||| |||||    
T  5974206 agggaccaaaaacatatttaaccctaaaataattgagacacgctaattgtcacatcagcattccgttagagaattaacaacatggactaattttaataac 5974107  T
Q  179 gaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    | | ||||||||||  |||||||||| ||||||||||||| || | ||||||||||||||    ||||||| |||  |||||||| |||||||||    
T  5974106 ggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaac 5974012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 42 - 237
Target Start/End: Original strand, 211581 - 211774
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||||| |||||||| || ||||||| |||||||||||| |||||| ||| ||||||||||| |||||| |||| |||||||   ||||    
T  211581 aaaatgtaaggactattcttcaaagttacgcaaaatgtagggacaaaaaatatatttaaccctaaaataattgggacccactaaccgccacat---catt 211677  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagatttt-aaaagcatttaatgaaatatatgaactattcttcaaa 237  Q
     |||||||||||||| |  | ||||||| |||||||| | |||||||||||||||||||| ||||  |||||||||||| || | |||||||||||||    
T  211678 tcgttagagaattaacagtagggattaa-tttgataatggagataaaatgtgaagattttaaaaaatatttaatgaaatgtagggactattcttcaaa 211774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 4130652 - 4130734
Alignment:
Q  282 ttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattgacaatg 364  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4130652 ttataagcatattgatgtgcggtgacattgaatttgtgattttcagtatacaaatttgctaaagtttgaaaagattgacaatg 4130734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 14712896 - 14712694
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaataattgagacccattaactgccacatc 134  Q
    |||||| |||||||||||||||| |||||||| || ||||||| |||||| |||||||||||| ||||||||||||||  |||||| ||||||| |||||    
T  14712896 tttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaaccttaaaataatttggacccactaactgctacatc 14712797  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
      ||||||||| ||||||||| || | | | ||||||| |||||| | ||||||| | | ||||| |||| |||||||| ||||||| | | ||||||||    
T  14712796 cgcattccgttggagaattaacaataggaactaatttttataacgcatataaaatataaggatttaaaaaacatttaataaaatata-ggattattcttc 14712698  T
Q  235 aaag 238  Q
    ||||    
T  14712697 aaag 14712694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 269
Target Start/End: Complemental strand, 25932313 - 25932084
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    |||||||||  |||||| ||||||||||| ||||||  |||||| |||||| ||||||| || |||||||||||||| ||| ||||   ||||||| |||    
T  25932313 aaaatgtaataactattcttcaaagtcacgcaaaatatagggaccaaaaaatatatttaaccctaaaataattgagatccactaaccaacacatcagcat 25932214  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag- 238  Q
    |||||||||||| ||||| |||||| |||||||||||||| ||||||||||  | ||||||||||     |||||||||  | | ||||||||||||||     
T  25932213 tccgttagagaaataatagcatggactaattttgataacggagataaaatgcaaggattttaaaa----ataatgaaatgcagggactattcttcaaagg 25932118  T
Q  239 ---gcaaaatgtaattactaaaaatatatttaac 269  Q
       |||||||||||  ||||||||||||||||||    
T  25932117 aaagcaaaatgtaaagactaaaaatatatttaac 25932084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 211530 - 211442
Alignment:
Q  185 aaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||||||| |||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 211442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 14712927 - 14713059
Alignment:
Q  108 taattgagacccattaactgccacatcaacatt---ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    |||||| |||||| ||||| |||||||| ||||   ||||||||||||||| | ||  || |||||||||||||  ||||||||| |||  ||||  |||    
T  14712927 taattgggacccactaactaccacatcagcattaacccgttagagaattaacagcagagactaattttgataacagagataaaatatgagcatttctaaa 14713026  T
Q  205 gcatttaatgaaatatatgaactattcttcaaa 237  Q
     ||||||||||||| || | |||||||||||||    
T  14713027 acatttaatgaaatgtaaggactattcttcaaa 14713059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17157752 - 17157860
Alignment:
Q  1 tgactttgaaaaatagtccttacattttgcgtgacttta----------ttaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaa 90  Q
    |||||||||| |||||||||||||||||| |||||||||          ||||||||||  ||||||| |||||||| || ||||||| |||||| ||||    
T  17157752 tgactttgaagaatagtccttacattttgtgtgactttaaaatcatttattaaaatgtacagactattcttcaaagttacgcaaaatgtagggaccaaaa 17157851  T
Q  91 acatattta 99  Q
    |||||||||    
T  17157852 acatattta 17157860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 4510297 - 4510189
Alignment:
Q  166 taattttgataacgaagataaaatgtgaag-attttaaaagcatttaatgaaatatatgaactattcttcaa--aggc--aaaatgtaattactaaaaat 260  Q
    |||||||||||||  ||||||||| || || ||||||||| ||||||||||||| || | ||||||||||||  ||||  |||||||||  ||||||||     
T  4510297 taattttgataaccgagataaaatatggaggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaac 4510198  T
Q  261 atatttaac 269  Q
    |||||||||    
T  4510197 atatttaac 4510189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 25932323 - 25932403
Alignment:
Q  122 taactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaa 202  Q
    |||||||||||| |  ||||||||||||||||||   ||  || |||||||||||||| |||||||||||||  |||||||    
T  25932323 taactgccacattagaattccgttagagaattaacggcagagactaattttgataacggagataaaatgtgagaattttaa 25932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 7646006 - 7646069
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| |||||||||||||||| |||||||   ||||||||| | |||| |||||||||||||    
T  7646006 tttattgaaatgtaaggactattcttcaaaggagcacaaaatgtaaggactaaaaacatattta 7646069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 18339306 - 18339108
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacatt 140  Q
    ||||||||||||||| | ||||||||||| ||||||| | |||  |||||||||||||  | ||||||||||| |||||| |||||| ||||||||||||    
T  18339306 aaaatgtaaggactactcttcaaagtcacgcaaaatgtaaggatcaaaaacatatttaatcctaaaataattgggacccactaactgtcacatcaacatt 18339207  T
Q  141 ccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||||||||||||| | |||||| |||||||||| | | ||||||||||||| |||||||||| ||||||||||||||||   |||||||||||||||    
T  18339206 ccgttagagaattaacagcatggactaattttgatgatggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaagg 18339108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 86 - 269
Target Start/End: Original strand, 18999541 - 18999729
Alignment:
Q  86 aaaaaacatatttacct-taaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagat 184  Q
    |||||||||||||| || ||||||||||| || ||| |||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||| |||||    
T  18999541 aaaaaacatatttaactctaaaataattgggatccactaactgccacatcatcattccgttagagaattaacaacaatgattaattttgataacaaagat 18999640  T
Q  185 aaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||||||||| ||||||||||  |||||||||||| |||| |||||||||||||     |||||||||||  |||||||| |||||||||    
T  18999641 aaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaac 18999729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 87131 - 87350
Alignment:
Q  55 tattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaatt 153  Q
    |||| ||||||||||  ||||||| |||||| ||||||||||||| || ||||||||||| ||| || ||||| |||||||||||||  |||||||||||    
T  87131 tattgttcaaagtcatgcaaaatgtagggaccaaaaacatatttaaccctaaaataattgggactcactaactaccacatcaacattatgttagagaatt 87230  T
Q  154 aataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg----caaaatgtaa 249  Q
    || ||||  || |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| || | |||||||||||||||    |||||| |||    
T  87231 aacaacaaagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataa 87330  T
Q  250 ttactaaaaatatatttaac 269  Q
      |||||||| |||||||||    
T  87331 ggactaaaaacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 3935550 - 3935749
Alignment:
Q  42 aaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacat 139  Q
    ||||||||||||||||| ||||||||||  ||||||| || ||| |||||||||||||| || |||||||| || |||||| |||| |||||||||||||    
T  3935550 aaaatgtaaggactattcttcaaagtcatgcaaaatgtagagaccaaaaaacatatttaaccctaaaataactgggacccactaaccgccacatcaacat 3935649  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    | |||||||||||||| | ||  || ||||||| ||||| |||||||||||||| |||||||||| || |||||||||| || | | |||||||||||||    
T  3935650 ttcgttagagaattaacagcagagactaattttaataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggattattcttcaaagg 3935749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 3406709 - 3406913
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccat--taactgccaca 132  Q
    |||||| |||||||||||||||| || |||||||| |||||||  || || ||||||||||||| |||||||||| |||  |||| |  |||||| ||||    
T  3406709 tttattgaaatgtaaggactatttttaaaagtcacgcaaaatgtcggaacgaaaaacatatttaaccttaaaatatttggaacccctagtaactgtcaca 3406808  T
Q  133 tcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattct 232  Q
    |||||||||||||||| |||||||| || ||| |||||||||||||  |||||||||||||  |||||||||  ||||||| ||||||  ||||||||||    
T  3406809 tcaacattccgttagaaaattaatatcagggactaattttgataacagagataaaatgtgagaattttaaaaatatttaataaaatattggaactattct 3406908  T
Q  233 tcaaa 237  Q
    |||||    
T  3406909 tcaaa 3406913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 29751892 - 29751728
Alignment:
Q  41 taaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaaca 138  Q
    |||||||||||||||||| |||||||||||  |||||| |||||| |||||||||||||| || ||||||||||| |||||| |||| ||||||||||||    
T  29751892 taaaatgtaaggactatttttcaaagtcacgtaaaatgtagggaccaaaaaacatatttaaccctaaaataattgggacccagtaaccgccacatcaaca 29751793  T
Q  139 ttccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    |||||||||||||||||   || ||| |||||||||||||| |||||||||||||  |||||||||    
T  29751792 ttccgttagagaattaagcgcagggactaattttgataacg-agataaaatgtgagaattttaaaa 29751728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 29752558 - 29752394
Alignment:
Q  41 taaaatgtaaggactattattcaaagtcacacaaaatgcagggac-aaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaaca 138  Q
    |||||||||||||||||| |||||||||||  |||||| |||||| |||||||||||||| || ||||||||||| |||||| |||| ||||||||||||    
T  29752558 taaaatgtaaggactatttttcaaagtcacgtaaaatgtagggaccaaaaaacatatttaaccctaaaataattgggacccagtaaccgccacatcaaca 29752459  T
Q  139 ttccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaa 204  Q
    |||||||||||||||||   || ||| |||||||||||||| |||||||||||||  |||||||||    
T  29752458 ttccgttagagaattaagcgcagggactaattttgataacg-agataaaatgtgagaattttaaaa 29752394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 35383467 - 35383296
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| ||||||||||| ||||||| |||||  ||||||||||||| || |||||||||||||| ||  |||||||||| |||  |||||||||    
T  35383467 taaggactattcttcaaagtcacgcaaaatgtagggatcaaaaacatatttaaccctaaaataattgagatccgctaactgccacttcagtattccgtta 35383368  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    || |||||| | |||||| ||||||||||||||  |||||||| ||| |||||||||| |||||||||||||    
T  35383367 gaaaattaacagcatggactaattttgataacggggataaaatatgaggattttaaaaacatttaatgaaat 35383296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 40 - 269
Target Start/End: Complemental strand, 31176742 - 31176508
Alignment:
Q  40 ttaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaaca 138  Q
    ||||||||||||||||||| ||||||||||| | ||||| |||||| |||||||||||||  | ||||||||||| ||| || | | || |||||||  |    
T  31176742 ttaaaatgtaaggactattcttcaaagtcacgcgaaatgtagggaccaaaaacatatttaatcctaaaataattgggactcactgaatgtcacatcagta 31176643  T
Q  139 ttccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag 238  Q
    |||||||| ||| |||| | || ||| ||||||||||||||  |||||||| ||| |||||||||| ||||||||||||| |||| ||| ||||||||||    
T  31176642 ttccgttaaagagttaacagcaaggactaattttgataacggggataaaatatgacgattttaaaaacatttaatgaaatgtatggactgttcttcaaag 31176543  T
Q  239 ----gcaaaatgtaattactaaaaatatatttaac 269  Q
        ||||||| |||  |||||||| |||||||||    
T  31176542 ggacgcaaaatataaggactaaaaacatatttaac 31176508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 43 - 234
Target Start/End: Complemental strand, 15978620 - 15978430
Alignment:
Q  43 aaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattc 141  Q
    |||||||||||||||| ||||||||||| ||||||| |||||  |||||||||||||  | |||||||||||  ||||| |||||||||||||| |||||    
T  15978620 aaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaacatatttaatcctaaaataattggaacccactaactgccacatcagcattc 15978521  T
Q  142 cgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
     |||| |||||||| ||||  || ||||||| |||||  |||||||||||||   |||||||| ||||||||||||||||   ||||||||||    
T  15978520 tgttaaagaattaacaacaatgactaattttaataaccgagataaaatgtga--gttttaaaaacatttaatgaaatatagagactattcttc 15978430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 239
Target Start/End: Original strand, 30415335 - 30415538
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacct-taaaataattgagacccattaactgccacatc 134  Q
    ||||||||||||||| || |||| ||||||||||||||||||  |||||  ||||||||||||| || ||||||||||| |||||| |||||  ||||||    
T  30415335 tttattaaaatgtaatgattattcttcaaagtcacacaaaatttagggatcaaaaacatatttaactctaaaataattgggacccactaactatcacatc 30415434  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||||||||| ||||||||| | |   |  |||||||||||||| ||| ||||||||| |||||||||| || |||||||||| || | ||||||||||    
T  30415435 agcattccgttggagaattaacagctgagcctaattttgataacggagacaaaatgtgaggattttaaaaaca-ttaatgaaatgtagggactattcttc 30415533  T
Q  235 aaagg 239  Q
     ||||    
T  30415534 gaagg 30415538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 41 - 234
Target Start/End: Complemental strand, 3406693 - 3406499
Alignment:
Q  41 taaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttacctta-aaataattgagacccattaactgccacatcaacat 139  Q
    |||||| ||| || |||| || |||||||| ||||||| ||||||  ||||||||||||  ||  |||||||||||||  | ||||||||||||||||||    
T  3406693 taaaatataaagattattctttaaagtcacgcaaaatgtagggactgaaaacatatttaagtttgaaataattgagacttactaactgccacatcaacat 3406594  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    || || | |||||||| | ||   |||||||||||||||  ||||||||| | | |||||||||| |||||||||||||||||||||||||||||    
T  3406593 tctgtgaaagaattaacatcagatattaattttgataacagagataaaatataaggattttaaaaacatttaatgaaatatatgaactattcttc 3406499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 103 - 269
Target Start/End: Original strand, 31588265 - 31588436
Alignment:
Q  103 taaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaa 202  Q
    ||||||||||  |||||| | || ||||||||| ||||||||||||||||||| | || ||| |||||||||||||| ||||||||||| | ||||||||    
T  31588265 taaaataatttggacccactgacggccacatcagcattccgttagagaattaacagcagggactaattttgataacggagataaaatgttaggattttaa 31588364  T
Q  203 aagcatttaatgaaatatatgaactattcttcaaag-----gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||  |||||||||||| || | ||||||||||||||     |||||||||||  |||||||| |||||||||    
T  31588365 aaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaaggactaaaaacatatttaac 31588436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 269
Target Start/End: Complemental strand, 1650212 - 1650006
Alignment:
Q  70 cacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggatta- 167  Q
    ||||||||| |||||| |||||||||||||  ||||||||||||||||||  ||||||| |||||||||||||||||| |||||||| ||||  |||||     
T  1650212 cacaaaatgtagggactaaaaacatatttaatcttaaaataattgagacctgttaactgtcacatcaacattccgttaaagaattaacaacagagattaa 1650113  T
Q  168 --attttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa---ggcaaaatgtaattactaaaaatat 262  Q
      |||||||||||| ||||||||| | |  ||||||||| |||||||| |||| ||   | |||||||||||    ||||||| ||| ||||||||| ||    
T  1650112 ttattttgataacggagataaaatataagaattttaaaaacatttaataaaatgtagataatattcttcaaatggcgcaaaatataaatactaaaaacat 1650013  T
Q  263 atttaac 269  Q
    |||||||    
T  1650012 atttaac 1650006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 221
Target Start/End: Complemental strand, 13987485 - 13987335
Alignment:
Q  73 aaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattt 171  Q
    |||||| | |||| ||||||||||||| || |||||||||||||||||| |||||| ||||||| ||||||||||||||||||| | ||  || ||||||    
T  13987485 aaaatgtaaggaccaaaaacatatttaaccataaaataattgagacccactaactgtcacatcatcattccgttagagaattaacagcagagactaattt 13987386  T
Q  172 tgataacgaagataaaatgtgaagatttt-aaaagcatttaatgaaatata 221  Q
    | |||||| |||||||||||||  ||||| |||| ||||||||||||||||    
T  13987385 taataacggagataaaatgtgagaattttaaaaaacatttaatgaaatata 13987335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 103 - 269
Target Start/End: Original strand, 8647984 - 8648154
Alignment:
Q  103 taaaataattgagacccattaactgccacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaa 202  Q
    ||||||||||  ||| || ||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||| ||| ||||||||| ||||||||    
T  8647984 taaaataatttggactcactaactgccacatcaacattccgttaaagaattaacaacatagactaattttgataacggagaaaaaatgtgaggattttaa 8648083  T
Q  203 aagcatttaatgaaatatatgaactattctt-caaag---gcaaaatgtaattactaaaaatatatttaac 269  Q
    ||  |||||||||||| ||   ||||||||| |||||   |||||||||||  |||||||  |||||||||    
T  8648084 aaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaaatcatatttaac 8648154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 269
Target Start/End: Complemental strand, 16284508 - 16284275
Alignment:
Q  46 tgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatatttac-cttaaaataattgagacccattaactgccaca-----tcaacat 139  Q
    |||||||| | || ||||||||||| ||||||  |||||| ||||| ||| |||  | ||||||||||| || ||| |||||||||||     ||| |||    
T  16284508 tgtaaggattgtttttcaaagtcacgcaaaatatagggaccaaaaatatacttaatcctaaaataattgggatccactaactgccacaccacatcagcat 16284409  T
Q  140 tccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag- 238  Q
    |||||||||||||||| ||||  || |||||||||||||| ||||||||| ||| |||||||||| |||||||| |||||||   |||||||||||||      
T  16284408 tccgttagagaattaacaacaatgactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatataaagactattcttcaaaaa 16284309  T
Q  239 ---gcaaaatgtaattactaaaaatatatttaac 269  Q
       |||||||||||  |||||||| |||||||||    
T  16284308 aacgcaaaatgtaaggactaaaaacatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 35373675 - 35373504
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| |||||||| || ||||||| |||||| ||||||||||||| || |||||||||||| || || ||||| | ||||||  |||||||||    
T  35373675 taaggactattcttcaaagttacgcaaaatgtagggaccaaaaacatatttaaccctaaaataattgaaactcactaactactacatcagtattccgtta 35373576  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    ||||||||| | ||  || ||||||| ||||||  |||||||| ||| ||||||||||  ||||||||||||    
T  35373575 gagaattaacagcagtgactaattttaataacggggataaaatatgaggattttaaaaatatttaatgaaat 35373504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 269
Target Start/End: Original strand, 8750324 - 8750449
Alignment:
Q  148 agaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaa 243  Q
    |||||||| |||||||| |||||||||||||| ||||||||| ||| |||||||||  |||||||| |||| || | ||||||||||||||    |||||    
T  8750324 agaattaacaacatggactaattttgataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaa 8750423  T
Q  244 atgtaattactaaaaatatatttaac 269  Q
    ||||||  |||||||| |||||||||    
T  8750424 atgtaaggactaaaaacatatttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 18999474 - 18999367
Alignment:
Q  166 taattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaa----ggcaaaatgtaattactaaaaata 261  Q
    |||||||||||||| |||||||||| || ||||||||||  |||||||||||| |||| |||||||||||||     |||||||||||  |||||||| |    
T  18999474 taattttgataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaaca 18999375  T
Q  262 tatttaac 269  Q
    ||||||||    
T  18999374 tatttaac 18999367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 269
Target Start/End: Complemental strand, 8750236 - 8750011
Alignment:
Q  52 gactattattcaaagtcacacaaaatgcaggga-caaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagag 149  Q
    ||||||| |||||||||||  |||||| ||||| ||||||| | ||||| || ||||||||||||||| || |||||||| ||||| ||| | ||| |||    
T  8750236 gactatttttcaaagtcacgtaaaatgtagggatcaaaaaatacatttaaccctaaaataattgagactcactaactgccgcatcagcatcctgttggag 8750137  T
Q  150 aattaataacatggat--taattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaa 243  Q
    |||||| |   | ||   ||||||||||||||||||||||| || | ||||||||||  |||||||||||| || | | |||| |||||||    |||||    
T  8750136 aattaacagtgtagagactaattttgataacgaagataaaacgttacgattttaaaaatatttaatgaaatgtagggattattattcaaaggggcgcaaa 8750037  T
Q  244 atgtaattactaaaaatatatttaac 269  Q
    ||||||  | |||||| |||||||||    
T  8750036 atgtaagaattaaaaacatatttaac 8750011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 26392141 - 26392248
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    |||||| |||| ||||||||||| ||||||  |||||| ||||  ||||||| || ||||||||| |||||||| ||| |||||||||| ||||||||||    
T  26392141 taaggaatattcttcaaagtcacgcaaaatatagggaccaaaat-atatttaaccctaaaataatcgagacccactaattgccacatcatcattccgtta 26392239  T
Q  147 gagaattaa 155  Q
    |||||||||    
T  26392240 gagaattaa 26392248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 18339324 - 18339444
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattt-accttaaaataattgagacccattaactgccacatc 134  Q
    |||||||||||||||||| |||| |||||| | ||  |||||| | |||| ||||| |||||| ||| ||||||||||| |||  | |||||  ||||||    
T  18339324 tttattaaaatgtaaggattattcttcaaaataacgtaaaatgtaaggaccaaaaatatatttaaccctaaaataattgggactgactaactatcacatc 18339423  T
Q  135 aacattccgttagagaattaa 155  Q
    || ||| ||||||||||||||    
T  18339424 aatatttcgttagagaattaa 18339444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 4187860 - 4187923
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| ||||||||||||||||||| |||||  | ||||||| |||||| |||||||||||||    
T  4187860 tttattgaaatgtaaggactattatttaaagttgcgcaaaatgtagggactaaaaacatattta 4187923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 19353093 - 19353156
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| |||||| ||||||||| ||||||||||||||||||  | |||| |||||||||||||    
T  19353093 tttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatattta 19353156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 3935546 - 3935451
Alignment:
Q  116 acccattaactgccacatcaacattcc-gttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaat 213  Q
    ||||| ||| |||||||||| |||||| |||||||||||||   ||  || |||| ||||||| | ||||||||||||| |||||||||| ||||||||    
T  3935546 acccactaattgccacatcagcattcctgttagagaattaa---cagagactaatattgataatggagataaaatgtgaggattttaaaaacatttaat 3935451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 119250 - 119187
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta 99  Q
    |||||| |||||||||||||||| || |||||||| ||||||  | |||| |||||||||||||    
T  119250 tttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatattta 119187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 18340647 - 18340705
Alignment:
Q  181 agataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaagg 239  Q
    ||||| ||| |||||||||||||| ||||||||||||| || | ||||||||| |||||    
T  18340647 agatacaatatgaagattttaaaaacatttaatgaaatgtaaggactattcttaaaagg 18340705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 38834724 - 38834812
Alignment:
Q  129 cacatcaacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    |||||||| |||||||||||||||||| | ||  || ||| |||||||||  |||| |||||||   ||||||||| |||||||||||||    
T  38834724 cacatcaatattccgttagagaattaacagcagagactaa-tttgataacagagatcaaatgtgtgaattttaaaaacatttaatgaaat 38834812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 87107 - 87075
Alignment:
Q  186 aaatgtgaagattttaaaagcatttaatgaaat 218  Q
    ||||||||||||||||||| |||||||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaat 87075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 119808 - 119868
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatat 96  Q
    |||||| ||||| |||||||||| ||||||||||| ||||||  | |||| ||||||||||    
T  119808 tttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacatat 119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 35031 - 34829
Alignment:
Q  36 tttattaaaatgtaaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatc 134  Q
    |||||||||| ||||||| ||||  |||||||||| |||||||  | ||  ||||||||||||| ||||||||||||||| ||||| | ||||| |||||    
T  35031 tttattaaaacgtaaggaatatttctcaaagtcacgcaaaatgatgagatcaaaaacatatttaaccttaaaataattgaaacccactgactgcgacatc 34932  T
Q  135 aacattccgttagagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttc 234  Q
    | ||| |||||||| |||||||| ||  || |||||||||||||| |||||||||||||  | ||||||| ||||||||||||| |||| || ||| |||    
T  34931 agcatcccgttagaaaattaatagcagagactaattttgataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattc 34832  T
Q  235 aaa 237  Q
    |||    
T  34831 aaa 34829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 48 - 269
Target Start/End: Original strand, 35055 - 35281
Alignment:
Q  48 taaggactattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgtta 146  Q
    ||||||||||| |||||||||||  |||||  |||||| |||||||||| || || || |||||||||||| || ||||| |||||||||||||| ||||    
T  35055 taaggactattcttcaaagtcacgtaaaatctagggaccaaaaacatatgtaaccctacaataattgagactcactaactcccacatcaacattctgtta 35154  T
Q  147 gagaattaataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaa 242  Q
    |||| |||| | |||  | ||||||| |||||  ||||||||||||| |||||||||| |||| ||| |||| ||   ||||||||||||||    ||||    
T  35155 gagagttaagagcataaactaattttcataaccgagataaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaa 35254  T
Q  243 aatgtaattactaaaaatatatttaac 269  Q
    |||||||  |||||||| |||||||||    
T  35255 aatgtaaggactaaaaacatatttaac 35281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 55 - 218
Target Start/End: Complemental strand, 711 - 547
Alignment:
Q  55 tattattcaaagtcacacaaaatgcagggacaaaaaacatattta-ccttaaaataattgagacccattaactgccacatcaacattccgttagagaatt 153  Q
    |||| ||||||||||| ||||||  |||||||||  ||||||||| || ||||||||||| |||| ||||||| | |||||| |||||||||||| || |    
T  711 tattcttcaaagtcacgcaaaatatagggacaaactacatatttaaccctaaaataattgtgacctattaactactacatcagcattccgttagaaaaat 612  T
Q  154 aataacatggattaattttgataacgaagataaaatgtgaagattttaaaagcatttaatgaaat 218  Q
    || ||||| || ||||||||||||| || |||||||||||| ||||||||| |||||||||||||    
T  611 aacaacatagactaattttgataacaaaaataaaatgtgaaaattttaaaaacatttaatgaaat 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University