View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20016_low_18 (Length: 400)

Name: NF20016_low_18
Description: NF20016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20016_low_18
NF20016_low_18
[»] chr6 (31 HSPs)
chr6 (255-363)||(4116614-4116722)
chr6 (255-383)||(4042936-4043073)
chr6 (262-344)||(4130652-4130734)
chr6 (90-180)||(211440-211530)
chr6 (90-181)||(5974010-5974101)
chr6 (15-78)||(1550803-1550866)
chr6 (90-181)||(8710340-8710431)
chr6 (92-181)||(7645982-7646071)
chr6 (90-181)||(1869450-1869541)
chr6 (90-173)||(4510187-4510270)
chr6 (106-181)||(21113044-21113119)
chr6 (90-181)||(25932082-25932169)
chr6 (92-181)||(17157547-17157636)
chr6 (90-158)||(17157856-17157924)
chr6 (91-181)||(211720-211811)
chr6 (112-181)||(14713006-14713075)
chr6 (128-180)||(15147754-15147806)
chr6 (133-180)||(20824596-20824643)
chr6 (90-171)||(19579212-19579293)
chr6 (90-171)||(19595659-19595740)
chr6 (176-249)||(211442-211519)
chr6 (22-78)||(21548311-21548367)
chr6 (133-180)||(14257188-14257235)
chr6 (133-180)||(14257579-14257626)
chr6 (133-180)||(20824205-20824252)
chr6 (133-172)||(34984553-34984592)
chr6 (91-181)||(14712659-14712747)
chr6 (132-170)||(20522167-20522205)
chr6 (176-249)||(5974012-5974089)
chr6 (176-249)||(8710352-8710429)
chr6 (91-171)||(14712830-14712910)
[»] chr4 (58 HSPs)
chr4 (90-181)||(51906819-51906910)
chr4 (92-181)||(3296544-3296633)
chr4 (90-181)||(3296944-3297035)
chr4 (15-78)||(46639604-46639667)
chr4 (90-181)||(51906419-51906510)
chr4 (90-181)||(7118164-7118255)
chr4 (90-181)||(29691524-29691615)
chr4 (90-181)||(41510067-41510158)
chr4 (90-181)||(30608633-30608724)
chr4 (90-181)||(38759703-38759794)
chr4 (90-181)||(48553895-48553986)
chr4 (90-181)||(56106461-56106552)
chr4 (90-181)||(17288373-17288464)
chr4 (93-180)||(35469065-35469151)
chr4 (107-181)||(30953001-30953075)
chr4 (91-181)||(35166866-35166956)
chr4 (112-181)||(34129300-34129369)
chr4 (91-180)||(54142325-54142414)
chr4 (93-181)||(29691912-29692000)
chr4 (106-181)||(26168008-26168082)
chr4 (106-181)||(26984159-26984234)
chr4 (90-177)||(34294451-34294536)
chr4 (90-181)||(49426352-49426443)
chr4 (95-181)||(5544788-5544874)
chr4 (111-181)||(30608265-30608335)
chr4 (176-249)||(7118176-7118253)
chr4 (90-169)||(17287486-17287565)
chr4 (133-180)||(28957352-28957399)
chr4 (133-180)||(31227920-31227967)
chr4 (90-181)||(34128993-34129084)
chr4 (92-174)||(1791149-1791231)
chr4 (90-180)||(54143502-54143592)
chr4 (132-169)||(25917050-25917087)
chr4 (90-171)||(29691749-29691830)
chr4 (92-181)||(48759813-48759900)
chr4 (176-246)||(56106473-56106547)
chr4 (176-249)||(3296956-3297033)
chr4 (92-181)||(26168392-26168483)
chr4 (132-180)||(40841502-40841550)
chr4 (132-180)||(40841894-40841942)
chr4 (46-78)||(55223114-55223146)
chr4 (132-180)||(55347970-55348018)
chr4 (133-180)||(2669048-2669095)
chr4 (133-180)||(2669439-2669486)
chr4 (133-180)||(12108290-12108337)
chr4 (133-180)||(12922683-12922730)
chr4 (133-180)||(28957743-28957790)
chr4 (133-180)||(38026108-38026155)
chr4 (90-180)||(54168824-54168914)
chr4 (176-217)||(5544821-5544862)
chr4 (144-181)||(30048016-30048053)
chr4 (144-181)||(30062357-30062394)
chr4 (144-181)||(48760115-48760152)
chr4 (176-249)||(3296544-3296621)
chr4 (91-171)||(10580040-10580120)
chr4 (176-249)||(34128995-34129072)
chr4 (176-249)||(38759705-38759782)
chr4 (176-249)||(51906831-51906908)
[»] chr8 (41 HSPs)
chr8 (90-181)||(13315201-13315292)
chr8 (112-181)||(16662189-16662258)
chr8 (92-180)||(6297463-6297551)
chr8 (90-181)||(17914196-17914287)
chr8 (94-181)||(26243395-26243482)
chr8 (93-180)||(26720323-26720410)
chr8 (15-77)||(40471293-40471355)
chr8 (90-179)||(9800038-9800127)
chr8 (90-181)||(17915507-17915597)
chr8 (92-181)||(9800343-9800432)
chr8 (94-179)||(16662473-16662558)
chr8 (90-181)||(6298035-6298126)
chr8 (90-181)||(10047478-10047568)
chr8 (91-181)||(7344856-7344946)
chr8 (91-181)||(21006122-21006212)
chr8 (113-181)||(6297862-6297930)
chr8 (92-180)||(44148578-44148666)
chr8 (90-181)||(26997869-26997960)
chr8 (90-181)||(40304683-40304774)
chr8 (90-180)||(11089295-11089385)
chr8 (96-181)||(44024230-44024315)
chr8 (90-181)||(44803563-44803654)
chr8 (106-169)||(45369134-45369197)
chr8 (15-77)||(44083624-44083686)
chr8 (132-181)||(12489269-12489318)
chr8 (176-249)||(9800355-9800432)
chr8 (91-181)||(12489527-12489616)
chr8 (15-77)||(15148195-15148257)
chr8 (176-250)||(6297462-6297540)
chr8 (93-180)||(16682533-16682620)
chr8 (133-180)||(29917146-29917193)
chr8 (113-180)||(36155293-36155360)
chr8 (90-181)||(44802181-44802271)
chr8 (176-247)||(16662483-16662558)
chr8 (90-171)||(4694442-4694523)
chr8 (109-170)||(34614036-34614096)
chr8 (176-249)||(6298047-6298124)
chr8 (93-169)||(10047890-10047966)
chr8 (91-171)||(21005959-21006039)
chr8 (133-181)||(22601540-22601588)
chr8 (91-171)||(44024398-44024478)
[»] chr7 (43 HSPs)
chr7 (90-181)||(17075617-17075708)
chr7 (92-181)||(44803632-44803721)
chr7 (90-180)||(32092227-32092317)
chr7 (99-181)||(42750118-42750200)
chr7 (15-78)||(8770897-8770960)
chr7 (90-181)||(17075218-17075309)
chr7 (90-181)||(28854676-28854767)
chr7 (93-181)||(11974666-11974754)
chr7 (15-78)||(15765509-15765572)
chr7 (106-181)||(22948878-22948953)
chr7 (15-78)||(25185795-25185858)
chr7 (90-181)||(28852692-28852783)
chr7 (18-77)||(48620208-48620267)
chr7 (92-181)||(5029754-5029842)
chr7 (93-169)||(30938597-30938673)
chr7 (90-181)||(18152755-18152846)
chr7 (90-181)||(20543910-20544001)
chr7 (15-77)||(18766874-18766936)
chr7 (92-181)||(28838356-28838442)
chr7 (112-169)||(27311060-27311117)
chr7 (90-181)||(32092529-32092620)
chr7 (90-156)||(23548053-23548119)
chr7 (112-181)||(6621116-6621184)
chr7 (92-173)||(11992715-11992796)
chr7 (113-181)||(12908403-12908471)
chr7 (90-181)||(10466779-10466870)
chr7 (178-249)||(5029767-5029842)
chr7 (91-181)||(23549007-23549097)
chr7 (135-181)||(49053881-49053927)
chr7 (128-180)||(4152757-4152809)
chr7 (93-181)||(11975063-11975150)
chr7 (93-181)||(20544311-20544398)
chr7 (90-181)||(12933061-12933152)
chr7 (90-180)||(30939565-30939655)
chr7 (90-171)||(18443619-18443699)
chr7 (91-180)||(27310047-27310136)
chr7 (116-180)||(16755634-16755698)
chr7 (176-249)||(17075629-17075706)
chr7 (15-78)||(34458772-34458835)
chr7 (132-169)||(33848309-33848346)
chr7 (17-77)||(18670634-18670694)
chr7 (176-249)||(32092229-32092306)
chr7 (22-78)||(41800918-41800974)
[»] chr3 (52 HSPs)
chr3 (90-181)||(9218513-9218604)
chr3 (90-181)||(43933439-43933530)
chr3 (91-181)||(13637780-13637870)
chr3 (90-178)||(132062-132150)
chr3 (90-181)||(22814295-22814386)
chr3 (94-181)||(37172084-37172171)
chr3 (90-181)||(44504386-44504477)
chr3 (15-78)||(45683638-45683701)
chr3 (116-181)||(9217845-9217910)
chr3 (15-78)||(17605434-17605497)
chr3 (90-181)||(25770320-25770411)
chr3 (90-181)||(34743470-34743561)
chr3 (90-181)||(48867649-48867740)
chr3 (90-181)||(51471334-51471425)
chr3 (127-181)||(51755914-51755968)
chr3 (112-181)||(50732246-50732315)
chr3 (112-181)||(50780540-50780609)
chr3 (93-181)||(33225490-33225578)
chr3 (90-181)||(48868587-48868678)
chr3 (132-181)||(44504133-44504182)
chr3 (176-249)||(9218525-9218602)
chr3 (93-169)||(25770728-25770804)
chr3 (90-181)||(37172476-37172567)
chr3 (133-180)||(46690114-46690161)
chr3 (90-181)||(26741304-26741391)
chr3 (90-181)||(27013412-27013499)
chr3 (92-181)||(43933728-43933816)
chr3 (90-163)||(45728335-45728408)
chr3 (93-181)||(13637478-13637565)
chr3 (176-249)||(22814297-22814374)
chr3 (132-180)||(45539249-45539297)
chr3 (132-180)||(45539641-45539689)
chr3 (93-181)||(51507919-51508007)
chr3 (15-78)||(18369570-18369633)
chr3 (46-77)||(36708349-36708380)
chr3 (133-180)||(36899295-36899342)
chr3 (93-172)||(38485699-38485778)
chr3 (133-180)||(42606321-42606368)
chr3 (133-180)||(46689723-46689770)
chr3 (91-181)||(3799722-3799812)
chr3 (133-171)||(4199896-4199934)
chr3 (92-170)||(33226933-33227011)
chr3 (133-171)||(36899695-36899733)
chr3 (15-77)||(42676052-42676114)
chr3 (176-249)||(27013414-27013487)
chr3 (135-180)||(35300788-35300833)
chr3 (187-249)||(45728340-45728406)
chr3 (176-249)||(132071-132148)
chr3 (176-249)||(43933441-43933518)
chr3 (176-249)||(44504398-44504475)
chr3 (176-249)||(51471336-51471413)
chr3 (91-167)||(51505955-51506031)
[»] chr2 (47 HSPs)
chr2 (90-181)||(2517412-2517503)
chr2 (90-181)||(21216922-21217013)
chr2 (90-181)||(21217321-21217412)
chr2 (90-181)||(21264990-21265081)
chr2 (90-181)||(21265389-21265480)
chr2 (91-181)||(2191217-2191307)
chr2 (90-181)||(21267368-21267459)
chr2 (90-177)||(24093155-24093242)
chr2 (15-78)||(28401164-28401227)
chr2 (90-181)||(3691389-3691480)
chr2 (90-181)||(21182306-21182397)
chr2 (90-181)||(32114471-32114562)
chr2 (101-181)||(3691093-3691173)
chr2 (90-181)||(32114165-32114255)
chr2 (90-180)||(23222864-23222954)
chr2 (94-181)||(7083525-7083612)
chr2 (106-181)||(10706651-10706724)
chr2 (90-181)||(2035607-2035698)
chr2 (15-78)||(16212648-16212711)
chr2 (90-181)||(32860813-32860904)
chr2 (90-171)||(18107435-18107516)
chr2 (176-249)||(2517414-2517491)
chr2 (90-180)||(10709474-10709564)
chr2 (112-181)||(24093556-24093625)
chr2 (176-249)||(2191218-2191295)
chr2 (176-249)||(21182308-21182385)
chr2 (176-249)||(21216924-21217001)
chr2 (176-249)||(21217333-21217410)
chr2 (176-249)||(21264992-21265069)
chr2 (176-249)||(21265401-21265478)
chr2 (133-180)||(1804273-1804320)
chr2 (133-180)||(1804664-1804711)
chr2 (128-171)||(2036613-2036656)
chr2 (142-181)||(2606656-2606695)
chr2 (46-77)||(3952770-3952801)
chr2 (133-180)||(6476128-6476175)
chr2 (133-180)||(6476519-6476566)
chr2 (133-180)||(11450797-11450844)
chr2 (133-180)||(11451188-11451235)
chr2 (133-180)||(27377690-27377737)
chr2 (133-180)||(27378081-27378128)
chr2 (46-77)||(37642962-37642993)
chr2 (133-180)||(39096958-39097005)
chr2 (127-169)||(3624925-3624967)
chr2 (147-181)||(39729606-39729640)
chr2 (176-217)||(3691120-3691161)
chr2 (176-249)||(24093157-24093234)
[»] chr1 (41 HSPs)
chr1 (90-181)||(3591337-3591428)
chr1 (90-181)||(5172744-5172835)
chr1 (90-181)||(9880483-9880574)
chr1 (90-180)||(1500982-1501072)
chr1 (90-181)||(6751353-6751445)
chr1 (90-181)||(18180278-18180369)
chr1 (90-181)||(19895399-19895490)
chr1 (90-181)||(50359439-50359530)
chr1 (91-181)||(5683161-5683251)
chr1 (92-181)||(48155279-48155368)
chr1 (90-181)||(18179878-18179969)
chr1 (126-181)||(47541553-47541608)
chr1 (90-181)||(50359124-50359215)
chr1 (91-181)||(4288440-4288525)
chr1 (90-181)||(42723255-42723350)
chr1 (90-180)||(45664686-45664776)
chr1 (90-171)||(12869664-12869745)
chr1 (93-181)||(6751049-6751137)
chr1 (93-181)||(19976166-19976254)
chr1 (91-181)||(9880790-9880880)
chr1 (128-171)||(1500096-1500139)
chr1 (90-173)||(5683569-5683652)
chr1 (133-180)||(32266915-32266962)
chr1 (133-180)||(40124508-40124555)
chr1 (113-171)||(12868455-12868513)
chr1 (91-181)||(48154974-48155063)
chr1 (176-249)||(3591349-3591426)
chr1 (133-180)||(8997382-8997429)
chr1 (176-248)||(19976166-19976242)
chr1 (90-181)||(31436383-31436474)
chr1 (133-180)||(32266524-32266571)
chr1 (46-77)||(34854285-34854316)
chr1 (133-180)||(40124117-40124164)
chr1 (46-77)||(43510435-43510466)
chr1 (133-180)||(47410464-47410511)
chr1 (133-180)||(47410855-47410902)
chr1 (176-219)||(47541553-47541596)
chr1 (176-219)||(48155291-48155334)
chr1 (90-180)||(36793575-36793665)
chr1 (90-164)||(37927519-37927593)
chr1 (132-181)||(19895800-19895849)
[»] chr5 (52 HSPs)
chr5 (96-181)||(3935694-3935779)
chr5 (90-179)||(87018-87107)
chr5 (92-181)||(87261-87350)
chr5 (90-181)||(31588346-31588438)
chr5 (90-181)||(18999365-18999456)
chr5 (90-177)||(22231164-22231251)
chr5 (15-77)||(3169138-3169200)
chr5 (90-180)||(30415485-30415574)
chr5 (92-181)||(8750360-8750449)
chr5 (112-181)||(18339094-18339163)
chr5 (90-180)||(4187837-4187927)
chr5 (90-170)||(8750009-8750089)
chr5 (91-170)||(18340661-18340740)
chr5 (90-181)||(18999640-18999731)
chr5 (90-181)||(31176506-31176597)
chr5 (19-77)||(29740743-29740801)
chr5 (90-180)||(119009-119099)
chr5 (91-180)||(8648066-8648155)
chr5 (90-171)||(119183-119264)
chr5 (93-181)||(13987284-13987373)
chr5 (92-181)||(16284275-16284364)
chr5 (113-169)||(30351716-30351772)
chr5 (15-78)||(38356935-38356996)
chr5 (133-180)||(6543847-6543894)
chr5 (133-180)||(28641202-28641249)
chr5 (91-181)||(35373454-35373538)
chr5 (90-180)||(119959-120049)
chr5 (176-214)||(3406499-3406537)
chr5 (15-77)||(11817256-11817318)
chr5 (118-180)||(14626090-14626152)
chr5 (143-181)||(35383292-35383330)
chr5 (90-171)||(3879214-3879294)
chr5 (90-167)||(18339314-18339391)
chr5 (132-180)||(21949832-21949880)
chr5 (15-78)||(2893652-2893715)
chr5 (133-180)||(5746802-5746849)
chr5 (133-180)||(5747193-5747240)
chr5 (133-180)||(6543456-6543503)
chr5 (133-180)||(21949441-21949488)
chr5 (133-180)||(28641593-28641640)
chr5 (133-180)||(31162462-31162509)
chr5 (133-180)||(31162853-31162900)
chr5 (140-179)||(38834780-38834819)
chr5 (133-180)||(39402253-39402300)
chr5 (92-169)||(1650006-1650082)
chr5 (152-181)||(3935451-3935480)
chr5 (92-181)||(20892545-20892633)
chr5 (92-169)||(37813376-37813453)
chr5 (176-249)||(87273-87350)
chr5 (176-249)||(18999367-18999444)
chr5 (176-249)||(18999652-18999729)
chr5 (176-249)||(31176508-31176585)
[»] scaffold0009 (2 HSPs)
scaffold0009 (93-181)||(108122-108210)
scaffold0009 (90-181)||(107721-107812)
[»] scaffold0063 (2 HSPs)
scaffold0063 (92-181)||(35192-35281)
scaffold0063 (144-181)||(34845-34882)
[»] scaffold0006 (1 HSPs)
scaffold0006 (15-74)||(41601-41660)
[»] scaffold0085 (2 HSPs)
scaffold0085 (133-180)||(39462-39509)
scaffold0085 (133-180)||(39853-39900)
[»] scaffold0014 (1 HSPs)
scaffold0014 (46-77)||(72348-72379)
[»] scaffold0933 (1 HSPs)
scaffold0933 (144-181)||(544-581)


Alignment Details
Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 255 - 363
Target Start/End: Original strand, 4116614 - 4116722
Alignment:
Q  255 atataccttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattgacaatgattcaaacat 354  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4116614 atataacttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattgacaatgattcaaacat 4116713  T
Q  355 ggtgacaaa 363  Q
    |||||||||    
T  4116714 ggtgacaaa 4116722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 255 - 383
Target Start/End: Complemental strand, 4043073 - 4042936
Alignment:
Q  255 atataccttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagat---------tgacaatga 345  Q
    ||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||    
T  4043073 atataacttataagcatattgatgtgttgtgaatttgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattcacaatggtgacaatga 4042974  T
Q  346 ttcaaacatggtgacaaagaccttagaagggaagattt 383  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  4042973 ttcaaacatggtgacaaagaccttagaagagaaaattt 4042936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 4130652 - 4130734
Alignment:
Q  262 ttataagcatattgatgtgtggtgacattgaatttgtgattttcaggatacaaatttgctaaagtttgaaaagattgacaatg 344  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4130652 ttataagcatattgatgtgcggtgacattgaatttgtgattttcagtatacaaatttgctaaagtttgaaaagattgacaatg 4130734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 211440 - 211530
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  211440 gggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccgtacatttcattaaatgattttaaaatcctcacatttt 211530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 5974010 - 5974101
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||| ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  5974010 gggttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccctacatttcattaaatgtttttaaaatccccacatttta 5974101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 1550866 - 1550803
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  1550866 taggcacaccttgtgcttggatattgctgtttggtgtgttatataatttcattttgatttcttc 1550803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 8710431 - 8710340
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||| ||||||| | ||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  8710431 gggttaaatatgtttttagtccttatattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatccccacatttta 8710340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 7646071 - 7645982
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| |||||||||| |||||||| ||||||| ||| ||||||||| |||||||||| ||||| |||||||||||    
T  7646071 gttaaatatgtttttagtccttacattttgtgctcctttgaagaatagtccttacatttcaataaatgttttaaaaattctcacatttta 7645982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 1869450 - 1869541
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||| | | |  ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  1869450 gggttaaatatgtttttagtccttacattctacaccactttaaaaaataatttctacatttcattaaatgtttttaaaatcctcacatttta 1869541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 4510187 - 4510270
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctc 173  Q
    ||||||||||| ||| ||||| ||||||||| |||   ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  4510187 gggttaaatatgtttttagtccttacattttacgcctatttgaagaatagtccctacatttcattaaatgtttttaaaatcctc 4510270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 21113044 - 21113119
Alignment:
Q  106 tagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||| ||||||||||||| |  || ||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  21113044 tagtccttacattttgcgccctattgaagaatagtctctacatttcattaaatgtttttaaaattctcacatttta 21113119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 25932082 - 25932169
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| |||||||||||||||||  |||||| ||||||| ||||| ||||||||||    |||||||||||||  |||||||    
T  25932082 gggttaaatatatttttagtctttacattttgctttcctttgaagaatagtccctgcatttcatta----tttttaaaatccttgcatttta 25932169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 17157547 - 17157636
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||  ||||||||| |||  | || ||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  17157547 gttaaatatgtttttagttcttacattttacgcctcattgaagaatagtccatacatttcattaaatatttttaaaatcctcacatttta 17157636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 17157924 - 17157856
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaat 158  Q
    ||||||||||| ||| ||||| |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  17157924 gggttaaatatgtttttagtccttacattttgcgccactttgaagaatagtccctacatttcattaaat 17157856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 211811 - 211720
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaat-gtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| || || |||||||||||||   ||| ||||||| |||||||||||||||||||  ||||||||||| ||||||||||    
T  211811 ggttaaatatgtttttaatccttacattttgcgcctatttgaagaatagtccctacatttcattaaatattttttaaaatcttcacatttta 211720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 14713075 - 14713006
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||| ||||||| ||| ||||||||||||||||||||  |||| |||| ||||||    
T  14713075 ttacattttgcgctcttttgaagaatagtccttacatttcattaaatgttttagaaatgctcatatttta 14713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 15147754 - 15147806
Alignment:
Q  128 tttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||| |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  15147754 tttagagaataatccctacatttcaataaatgtttttaaaatccctacatttt 15147806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 20824643 - 20824596
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  20824643 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 20824596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 19579293 - 19579212
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||||||  |||||  |||||||||| |   ||||||||||| || || ||||||| ||||||||||||||||||    
T  19579293 gggttaaatatattattagtccatacattttgcacctttttaaagaatagtctctgcatttcaataaatgtttttaaaatcc 19579212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 19595740 - 19595659
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||  |||||  |||||||||| |   ||||||||||| ||||||||||||| ||||| ||||||||||||    
T  19595740 gggttaaatatgttattagtccatacattttgcacctttttaaagaatagtccctacatttcaataaatatttttaaaatcc 19595659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 211519 - 211442
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  211519 attttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 211442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 21548367 - 21548311
Alignment:
Q  22 accttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||||||||||  | || ||| ||||||||||| |||||||||||||||||||||    
T  21548367 accttgtgcttggggactgctgtttggtgtgttatttaatttcattttgatttcttc 21548311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 14257188 - 14257235
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  14257188 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 14257235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 14257626 - 14257579
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  14257626 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 14257579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 20824205 - 20824252
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  20824205 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 20824252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 34984592 - 34984553
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcct 172  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  34984592 agaatagtccctacatttcaataaatgtttttaaaatcct 34984553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 14712659 - 14712747
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| ||||| ||||||||| |||  |||| ||||||||||| || |||| ||||||||||||| ||||||| | ||||||    
T  14712659 ggttaaatatgttt-tagtccttacattttacgcctctttgaagaataatcc-tatattttattaaatgttttttaaatccttatatttta 14712747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 20522205 - 20522167
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatc 170  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  20522205 aagaatagtccctacatttcaataaatgtttttaaaatc 20522167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 5974089 - 5974012
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    ||||||| |||  |||||||| |||||||||    
T  5974089 attttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaac 5974012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 8710352 - 8710429
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    ||||||| |||  |||||||| |||||||||    
T  8710352 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaac 8710429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 14712830 - 14712910
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    |||||||||| ||| | |||  |||||||||||   |||| || |||| ||| ||||||||| ||||||||||||||||||    
T  14712830 ggttaaatatgtttttggtccctacattttgcgtcactttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 14712910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 51906910 - 51906819
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  51906910 gggttaaatatgtttttagtccttacattttgcgctcctttgaagaatagtccctacatctcattaaatgtttttaaaatcctcacatttta 51906819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 3296544 - 3296633
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3296544 gttaaatatgtttttagtccttacattttgcgcccctttgaagaatattccctacatttcattaaatgtttttaaaatcctcacatttta 3296633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 3297035 - 3296944
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||||| ||||||||||||  ||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  3297035 gggttaaatatatttttagtccttacattttgcgaccctttgaagaatagtccctacgtttcattaaatgtttttaaaatccttacatttta 3296944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 46639604 - 46639667
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46639604 taggcataccttgtgcttggatattgctgtgtggtgtgttatataatttcattttgatttcttc 46639667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 51906419 - 51906510
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| |||||||||||||||||||  |||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  51906419 gggttaaatatgtttttagtctttacattttgcgcctctttgaagaatagtccctacgtttcattaaatgtttttaatatcctcacatttta 51906510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 7118255 - 7118164
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||||| |||| ||||||    
T  7118255 gggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaattctcaaatttta 7118164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 29691524 - 29691615
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||| |||||||   | ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29691524 gggttaaatatgtttttagtccttatattttgcatccatttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 29691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 41510067 - 41510158
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| || || ||||||||||||| ||||| ||||||| ||||||||||| ||||||| ||| ||||||||||| ||||||    
T  41510067 gggttaaatatatttttaatccttacattttgcgcccctttgaagaatagtccctacattttattaaatatttctaaaatcctcatatttta 41510158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 30608724 - 30608633
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||| | |||||||||| ||  |||| ||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  30608724 gggttaaatatgtttttagaccttacattttgtgcctctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacatttta 30608633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 38759703 - 38759794
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||| |||||||||  |||| ||||||| ||  ||||||||||||||||||||||||||||||| ||||||    
T  38759703 gggttaaatatttttttagtccttaaattttgcgcctctttgaagaatagtctatacatttcattaaatgtttttaaaatcctcaaatttta 38759794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 48553895 - 48553986
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||  ||| ||||| ||||||||||||  ||||| ||||||| ||| ||||||||||||||  ||||||||||||||||||||||    
T  48553895 gggttaaatacgtttttagtccttacattttgcgtccctttgaagaatagtccatacatttcattaaacctttttaaaatcctcacatttta 48553986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 56106552 - 56106461
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||| |||||| ||| |||||||||||||||| || ||||| ||||||| | |||| |||| |||||||||||||||||||||| |||||||    
T  56106552 gggtcaaatatgtttttagtctttacattttgtgcccctttgaagaatagttcctatattttattaaatgtttttaaaatcctctcatttta 56106461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 17288464 - 17288373
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||  |||||  ||||||||||||| |||| || |||| ||||||||||||| ||||||||||||||||||  ||||||||    
T  17288464 gggttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttta 17288373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 35469151 - 35469065
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||| || || |||||||| |||| || || ||||||||||| |||||||||||||| |||||||||||||||| |||||    
T  35469151 ttaaatatatttttaatccttacatttcgcgccccattgaagaataatccttacatttcattaaa-gtttttaaaatcctcaaatttt 35469065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 30953075 - 30953001
Alignment:
Q  107 agtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||| |||||||||||||  |||  ||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  30953075 agtccttacattttgcgcctcttagaagaatggtccctacatttcattaaatgtttttaaaatcctaacatttta 30953001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 35166956 - 35166866
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| | | ||||  ||||||||||||  ||||  || |||||||||  ||||||||||||||||||||||||||||||||||||    
T  35166956 ggttaaatatgtctttagtgcttacattttgcgtcccttcgaaaaataatcccagcatttcattaaatgtttttaaaatcctcacatttta 35166866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 34129369 - 34129300
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| |   ||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  34129369 ttacattttgcaccaatttgaagaatagtccctacatttcattaaatatttttaaaatcctcacatttta 34129300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 54142325 - 54142414
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||| ||  |||||  ||||||||||||  |||| ||||||| ||| ||||||||| ||||||||||||||||||| |||||||    
T  54142325 ggttaaatatgttattagtccctacattttgcgcgactttgaagaatagtccatacatttcaataaatgtttttaaaatccttacatttt 54142414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 29692000 - 29691912
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||| |||||||| |||||| ||||||||| || |||| |   || |||||||||||| ||||||||||||||||||||||    
T  29692000 ttaaatatgtttttagtctttgcattttacgctcctttgaataatagtttttatatttcattaaatatttttaaaatcctcacatttta 29691912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 26168008 - 26168082
Alignment:
Q  106 tagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||| ||||||||||||| | ||||||||||| |  |||||||| ||||||| ||||||||||||||||||||||    
T  26168008 tagtcattacattttgcgcccttttaaagaatagtttctacattt-attaaatatttttaaaatcctcacatttta 26168082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 26984159 - 26984234
Alignment:
Q  106 tagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||| |||| |||||||||  |||| ||||||| |||||| | || ||||||||||||||||||||||||||||||    
T  26984159 tagtttttatattttgcgcctctttgaagaatagtccctagactttattaaatgtttttaaaatcctcacatttta 26984234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 34294451 - 34294536
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacat 177  Q
    ||||||||||||||| ||||||| |||||||| |  | ||| ||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  34294451 gggttaaatatatttttagtctt-acattttgtgtccatttgaagaatagtcc-tacatttcattaaatgtttttaaaatcttcacat 34294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 49426443 - 49426352
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| | |||  |||||||||| || ||||||| |||| ||| ||||||||| ||||| ||||||||||||| ||||||||    
T  49426443 gggttaaatatgttttttgtccctacattttgctctactttaaataatagtccttacatttcaataaatatttttaaaatccttacatttta 49426352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 5544788 - 5544874
Alignment:
Q  95 aaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||| ||| ||||| | ||||||||||| | ||| ||||||| | |||| |||||||||||| |||||||||| |||||||||||    
T  5544788 aaatatctttttagtcctcacattttgcgcgcatttgaagaatagttcctatatttcattaaatatttttaaaattctcacatttta 5544874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 30608265 - 30608335
Alignment:
Q  111 tttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||||    ||| ||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  30608265 tttacattttgcgtcattttgaagaatagtccctacatttcattatatatttttaaaatcctcacatttta 30608335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 7118176 - 7118253
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  7118176 attttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 7118253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 17287486 - 17287565
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    ||||||||||| ||  |||||  ||||||||||||| ||||||| |||| ||| ||||||||| ||||| ||||||||||    
T  17287486 gggttaaatatgttattagtccctacattttgcgctactttaaataatagtccttacatttcaataaatatttttaaaat 17287565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 28957352 - 28957399
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  28957352 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 28957399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 31227920 - 31227967
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  31227920 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 31227967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 34128993 - 34129084
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || |  ||||||||||||  ||||| ||||||| |||||| |||| |||||| ||||||||||| |||| ||||||    
T  34128993 gggttaaatatgtttctaataattacattttgcgtccctttgaagaatagtccctatattttattaaacgtttttaaaattctcatatttta 34129084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 1791149 - 1791231
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctca 174  Q
    ||||||||| ||| ||||| ||| ||||| | |  |||| ||||||| ||| |||||||||||||||||||| ||||||||||    
T  1791149 gttaaatatgtttttagtcgttaaattttacacctctttgaagaatagtccatacatttcattaaatgttttaaaaatcctca 1791231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 54143592 - 54143502
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||  |||||  || ||||||| |  |||| ||||||| ||||||||||| | ||||||||||||||||||| |||||||    
T  54143592 gggttaaatatgttattagtccctatattttgcacgactttgaagaatagtccctacattttaataaatgtttttaaaatccttacatttt 54143502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 25917087 - 25917050
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaat 169  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  25917087 aagaataatccatacatttcattaaatgtttttaaaat 25917050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 29691830 - 29691749
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||| | ||| ||||||||||||   ||||||| |||| ||  ||||||||| ||||||||||||||||||    
T  29691830 gggttaaatatgtttttggtccttacattttgcgtgactttaaaaaatagtctttacatttcaataaatgtttttaaaatcc 29691749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 48759813 - 48759900
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| ||||||||| ||||| ||| || |||| ||| ||| ||| |||||||||||||||||| |||||||||||    
T  48759813 gttaaatatgtttttagtcgttacattttacgctcatttgaa-aatagtccttactttt-attaaatgtttttaaaattctcacatttta 48759900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 56106473 - 56106547
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatattt 246  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||    ||||||||||  |||||||| ||||||    
T  56106473 attttaaaaacatttaataaaatataggaactattcttcaaaggggcacaaaatgtaaagactaaaaacatattt 56106547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 3296956 - 3297033
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||  || | ||||||||||||||    |||||||||||  ||||||||||||||||||    
T  3296956 attttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggactaaaaatatatttaac 3297033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 26168483 - 26168392
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatcc--ctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| || || ||||||||||||| |||||  |||||| |||  |||||||| ||||||||||| |||||||  |||||||||    
T  26168483 gttaaatatgtttttaatccttacattttgcgcccctttgtagaatagtcctcctacattttattaaatgtttctaaaatctccacatttta 26168392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 40841502 - 40841550
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  40841502 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 40841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 40841942 - 40841894
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  40841942 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 40841894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 55223146 - 55223114
Alignment:
Q  46 tggtgtgttatataatttcattttgatttcttc 78  Q
    |||||||||||||||||||||||||||||||||    
T  55223146 tggtgtgttatataatttcattttgatttcttc 55223114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 55348018 - 55347970
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  55348018 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 55347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 2669048 - 2669095
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  2669048 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 2669095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 2669486 - 2669439
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  2669486 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 2669439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 12108337 - 12108290
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  12108337 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 12108290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 12922683 - 12922730
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  12922683 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 12922730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 28957790 - 28957743
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  28957790 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 28957743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 38026155 - 38026108
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  38026155 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 38026108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 54168914 - 54168824
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| || ||  || ||||||||   |||| ||||||||||||||||||| | ||||| ||||||||||||  |||||||    
T  54168914 gggttaaatatgtttttaatccctatattttgcgtgactttgaagaataatccctacattttaataaatatttttaaaatccctacatttt 54168824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 5544862 - 5544821
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaa 217  Q
    |||||||||  ||||||||||||||| |||||||||||||||    
T  5544862 attttaaaaatatttaatgaaatataggaactattcttcaaa 5544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 30048053 - 30048016
Alignment:
Q  144 tacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  30048053 tacatttcattaaatatttttaaaatcctcatatttta 30048016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 30062394 - 30062357
Alignment:
Q  144 tacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  30062394 tacatttcattaaatatttttaaaatcctcatatttta 30062357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 48760152 - 48760115
Alignment:
Q  144 tacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  48760152 tacaattcattaaatgtttttaaaatcttcacatttta 48760115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 3296621 - 3296544
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | | ||||||||||||    |||||||||||  |||||||| |||||||||    
T  3296621 attttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 3296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 10580040 - 10580120
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    |||||||||| ||| | |||  |||||||||||   |||| || |||| ||| ||||||||| ||||||||||||||||||    
T  10580040 ggttaaatatgtttttggtccatacattttgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 10580120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 34129072 - 34128995
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||    |||||||||||||| || ||| |||||||||    
T  34129072 attttaaaaacgtttaataaaatatagggactattcttcaaagggacgcaaaatgtaattattagaaacatatttaac 34128995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 38759782 - 38759705
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||    ||||||| |||  |||||||| |||||||||    
T  38759782 attttaaaaacatttaatgaaatgtatagactattcttcaaagaggcgcaaaatttaaggactaaaaaaatatttaac 38759705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 51906831 - 51906908
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| |||||||||| || || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  51906831 attttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatgtaaggactaaaaacatatttaac 51906908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 13315201 - 13315292
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  13315201 gggttaaatatgtttttagtccttacattttgcgcccatttaaagaatagtccctacatttcattaaatgtttttaaaatcatcacatttta 13315292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 16662189 - 16662258
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  16662189 ttacattttgcgctcctttgaagaatagtccctacatttcattaaatgtttttaaaattctcacatttta 16662258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 6297463 - 6297551
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||| | | ||||| ||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||    
T  6297463 gttaaatatgtctttagtccttacattttgcgcccctttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacatttt 6297551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 17914196 - 17914287
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| |||  |||||||||||||||||   |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  17914196 gggttaaatatgttttaagtctttacattttgcgtctctttgaagaatagtccctacattttattaaatgtttttaaaatcctcacatttta 17914287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 26243482 - 26243395
Alignment:
Q  94 taaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||| ||| ||||| ||| ||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  26243482 taaatatgtttttagtccttatattttgcgctcctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacatttta 26243395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 26720323 - 26720410
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||| |||||  |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||  |||||||    
T  26720323 ttaaatatatttttagtccctacattttgcgctcctttgaagaatagtccctacatttcattaaatatttttaaaatccctacatttt 26720410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 40471293 - 40471355
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  40471293 taggcataccttgtgtttggatattgctgtgtggtgtgttatataatttcattttgatttctt 40471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 9800038 - 9800127
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacattt 179  Q
    ||||||||||| ||| ||||| ||| |||||||||  |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9800038 gggttaaatatgtttttagtccttagattttgcgcctctttgaagaataatccttacattttattaaatgtttttaaaatcctcacattt 9800127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 17915597 - 17915507
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||| |||||||| ||||||| ||| ||||||| ||||||||||||| ||||||||||||||||    
T  17915597 gggttaaatatgtttttagtccttacattttgtgctcctttgaagaata-tccttacattttattaaatgttttttaaatcctcacatttta 17915507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 9800432 - 9800343
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||| | ||| || |||||||||| ||||| ||||||| ||| || |||||||||||||||||||||||||| ||||||||    
T  9800432 gttaaatatatttttggtccttgcattttgcgcccctttgaagaatagtccatatatttcattaaatgtttttaaaatccttacatttta 9800343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 16662558 - 16662473
Alignment:
Q  94 taaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacattt 179  Q
    ||||||| ||| ||||| ||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||| |||| ||||    
T  16662558 taaatatgtttttagtccttacattttgcgctcttttgaagaatagttcctacatttcattaaatgtttttaaaattctcatattt 16662473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 6298126 - 6298035
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| | ||| ||||  |||||||||||   ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  6298126 gggttaaatgtgtttttagtgcttacattttgcttccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttta 6298035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 10047478 - 10047568
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || || ||||||||||||| | ||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  10047478 gggttaaatatgtttttaatccttacattttgcgcccttttgaagaatagtccctacatt-cattaaatgtttttaaaattctcacatttta 10047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 7344946 - 7344856
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||| |||| ||| ||||| |||||||||| || ||||| ||||||||||| ||||||| |||| |||||||||||||||||| ||||||    
T  7344946 ggttatatatgtttttagtccttacattttgtgcccctttgaagaataatccatacattttattatatgtttttaaaatcctcatatttta 7344856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 21006212 - 21006122
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| || || |||||||||  || ||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  21006212 ggttaaatatgtttatactccttacatttttggcccctttgaaaaatagtccctacattttattaaatgtttttaaaatcctcacatttta 21006122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 6297930 - 6297862
Alignment:
Q  113 tacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||   |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  6297930 tacattttgcgtgactttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttta 6297862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 44148578 - 44148666
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||| ||| |||||  |||||||| ||||| ||| ||||||| ||||||||||| | |||| ||||||||||||||||||||||    
T  44148578 gttaaatatgtttttagtccctacattttacgctcttttgaagaatagtccctacattttaataaacgtttttaaaatcctcacatttt 44148666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 26997960 - 26997869
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||  ||||||||||||  | ||| ||||||| ||| ||||||||||||| | ||||||||||||||||||||||    
T  26997960 gggttaaatatgtttttagttcttacattttgcgtccatttgaagaatagtccatacatttcattaattatttttaaaatcctcacatttta 26997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 40304683 - 40304774
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| |||||  |||||||||| ||||||| |  |||| ||| ||||||| | ||||| ||||||||||||||||||||||    
T  40304683 gggttaaatatatttttagtccctacattttgcactcctttgataaatagtccatacatttaagtaaatatttttaaaatcctcacatttta 40304774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 11089385 - 11089295
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||| ||| ||| ||||  ||| ||||| ||||||||||||||||||||  |||||||| |||||| ||||||||||||||| |||||    
T  11089385 gggttaagtatgtttttagttcttagatttttcgctcctttaaagaataatcattacatttcgttaaatatttttaaaatcctcatatttt 11089295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 44024230 - 44024315
Alignment:
Q  96 aatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||||| ||| ||||||| ||| ||| ||||||| ||| |||||||||  |||||||||||||||| ||||||||||    
T  44024230 aatatatttttagtccttaaattttgcactcatttgaagaatagtccatacatttcaccaaatgtttttaaaatcatcacatttta 44024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 44803654 - 44803563
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| | | |||||  |||||||||||||||||| |  |||| ||||||||||| | |||| ||||||||||| |||||||||||    
T  44803654 gggttaaatatgtgtttagtccctacattttgcgctcctttgataaatagtccctacatttaagtaaaagtttttaaaattctcacatttta 44803563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 45369197 - 45369134
Alignment:
Q  106 tagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    ||||| ||| |||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  45369197 tagtccttatattttgtgctcctttaaaaaataatccttacatttcaataaatgtttttaaaat 45369134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 44083624 - 44083686
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||||| ||||| || |||||||||| ||| |||||||||||||||||| |||||||||||||    
T  44083624 taggcacaccttatgtttggatattgctgtttggtgtgttatataattttattttgatttctt 44083686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 12489269 - 12489318
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  12489269 aagaatagtccctacatttcattaaatatttttaaaatcctcgcatttta 12489318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 9800355 - 9800432
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    |||||||| ||  || |||||||||||||||    
T  9800355 attttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaac 9800432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 12489616 - 12489527
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctt-taaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| ||||| |||||||||||| || || | ||||||| ||| ||||||||||||| ||||||||||||||| ||||||||    
T  12489616 ggttaaatatgtttttagtccttacattttgcg-tcgttatgaagaatagtccttacatttcattaa-tgtttttaaaatccttacatttta 12489527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 15148195 - 15148257
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||||| | ||| |||||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  15148195 taggcacatcttatgcttggaaattgctgtttggtgtgttatataatttcattttaatttctt 15148257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 6297540 - 6297462
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaaca 250  Q
    ||||||||| ||||||||||||| || ||||||||||||||||    |||||||||||  |||||| | ||||||||||    
T  6297540 attttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaagacatatttaaca 6297462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 16682533 - 16682620
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||| ||| | ||| ||| |||||||||  |||||||||||| ||  |||||||||  ||||||||||||||| || |||||||    
T  16682533 ttaaatatgtttttggtcattatattttgcgcgactttaaagaatagtcattacatttcaaaaaatgtttttaaaattcttacatttt 16682620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 29917146 - 29917193
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  29917146 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 29917193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 36155293 - 36155360
Alignment:
Q  113 tacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||| ||  |||| || |||| ||||||||||| | ||||||||||||||||||| |||||||    
T  36155293 tacattttgtgcgactttgaataatagtccctacattttaataaatgtttttaaaatccttacatttt 36155360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 44802181 - 44802271
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| |||||   ||||||||||||| ||| |  |||| ||| ||||||| | ||| ||||||||||||||||||||||||    
T  44802181 gggttaaatatgtttttagtcccaacattttgcgctcatttgataaatagtccatacatttaagtaa-tgtttttaaaatcctcacatttta 44802271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 16662483 - 16662558
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaa----ggcaaaatgtaattactaaaaatatattta 247  Q
    ||||||||| ||||||||||||| || |||||||||||||||     |||||||||||  |||||||| |||||||    
T  16662483 attttaaaaacatttaatgaaatgtaggaactattcttcaaaagagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 4694523 - 4694442
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||| |||||  || ||||| ||||| ||| |  |||| ||||||||||| | ||||||||||||||||||    
T  4694523 gggttaaatatgtttttagtccctatattttacgctcttttgataaatagtccctacatttaagtaaatgtttttaaaatcc 4694442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 34614036 - 34614096
Alignment:
Q  109 tctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatc 170  Q
    ||||||||||||||||  |||| ||||||| ||  ||||||||| |||||||||||||||||    
T  34614036 tctttacattttgcgcgactttgaagaatagtca-tacatttcaataaatgtttttaaaatc 34614096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 6298047 - 6298124
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| | |||||||    
T  6298047 attttaaaaacatttaatgaaatgtaaggactattcttcaaagggaagcaaaatgtaagcactaaaaacacatttaac 6298124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 10047966 - 10047890
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    |||||||||||| || || ||||||||| | ||||||| ||||||| ||  || || ||||||||| ||||||||||    
T  10047966 ttaaatatatttttaatccttacattttccactcctttgaagaatagtctttatatatcattaaatatttttaaaat 10047890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 21006039 - 21005959
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    |||||||||| ||| | |||  |||||||||||   |||| || |||| ||| ||||||||| ||||||||||||||||||    
T  21006039 ggttaaatatgtttttggtccctacattttgcgtggctttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 21005959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 22601540 - 22601588
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||| ||||||||||| | |||||||||||||||| || ||||||||    
T  22601540 agaatagtccctacatttaaataaatgtttttaaaattcttacatttta 22601588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 44024398 - 44024478
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    |||||||||| ||| | ||| ||||||||||||   |||| || |||| ||| ||||||||| ||||| ||||||||||||    
T  44024398 ggttaaatatgtttttggtccttacattttgcgtgactttgaaaaatagtccttacatttcaataaatatttttaaaatcc 44024478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 17075708 - 17075617
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17075708 gggttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 17075617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 44803721 - 44803632
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  44803721 gttaaatatgtttttagtccttacattttgcgcttctttaaagaatagtctctacatttcattaaatgtttttaaaattctcacatttta 44803632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 32092227 - 32092317
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| ||||| |||||||||||||  |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  32092227 gggttaaatatgtttttagtccttacattttgcgcctctttgaagaatagtccctgcatttcattaaatgtttttaaaatcctcacatttt 32092317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 42750200 - 42750118
Alignment:
Q  99 atatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||| ||||||||||||||| ||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  42750200 atatttttagtctttacattttacgcccctttgaagaatagtccctacatttcattaaacgtttttaaaatcctcacatttta 42750118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 8770960 - 8770897
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8770960 taggcataccttatgcttggatattgctgtgtggtgtgttatataatttcattttgatttcttc 8770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 17075218 - 17075309
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||| |||||||||  |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17075218 gggttaaatatgtttttagtccttatattttgcgccgctttgaagaatagtccctacatttcattaaaagtttttaaaatcctcacatttta 17075309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 28854676 - 28854767
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || || ||| ||||||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  28854676 gggttaaatatgtttttaatccttatattttgcgcccatttaaagaatactccctacattttattaaatgtttttaaaatcctcacatttta 28854767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 11974666 - 11974754
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||  || ||||| ||||||||||||||||||| || |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  11974666 ttaaatatgattttagtccttacattttgcgctcctttgaaaaatagtctgtacatttcattaaatgtttttaaaatcctcacatttta 11974754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 15765509 - 15765572
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  15765509 taggcacaccttgtgcttggatattgctgtttggtgtgttatataatttcattttgatttcttc 15765572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 22948953 - 22948878
Alignment:
Q  106 tagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||| ||||||||||||  ||||| ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  22948953 tagtccttacattttgcgaccctttgaagaatagtctctacatttcattaaatgtttttaaaatcctcacatttta 22948878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 25185795 - 25185858
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  25185795 taggcacaccttgtgcttggatattgctgtttggtgtgttatataatttcattttgatttcttc 25185858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 28852692 - 28852783
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || || |||||||||| |  | |||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  28852692 gggttaaatatgtttttaatccttacattttgtgtccatttaaataatactccctacatttcattaaatgtttttaaaatcctcacatttta 28852783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 48620208 - 48620267
Alignment:
Q  18 gcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  48620208 gcataccttgtgcttggatattgctgtatggtgtgttatataatttcattttgatttctt 48620267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 5029842 - 5029754
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||| ||||| ||||||||||||   |||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  5029842 gttaaatatatttttagtcgttacattttgcgtctctttgaagaatagtccctatatttcattaaatgttttt-aaatcctcacatttta 5029754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 30938597 - 30938673
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    |||||||| ||| ||||| |||||||||||||  |||||||||||||||| ||||||| ||||||||||||||||||    
T  30938597 ttaaatatgtttttagtccttacattttgcgcctctttaaagaataatccatacattttattaaatgtttttaaaat 30938673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 18152755 - 18152846
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| |||  |||  ||||||||||||| ||||| ||||||| |||||||||||  ||||||||| |||||||||||||||||||    
T  18152755 gggttaaatatgttttcagttcttacattttgcgcccctttgaagaatagtccctacattttgttaaatgttcttaaaatcctcacatttta 18152846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 20543910 - 20544001
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || |  |||||||||| || ||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  20543910 gggttaaatatgtttttaattcttacattttgtgcccctttgaagaatagtccctacatttcattaaatttttttaaaatcctcatatttta 20544001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 18766936 - 18766874
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  18766936 taggcacaccttgtgcttggatattgctgtttggtatgttatataatttcattttgatttctt 18766874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 28838356 - 28838442
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| |||||||||||||||| | |||||| |||||   |||| |||||||||||||||||||||||||||||||||||||    
T  28838356 gttaaatatgtttttagtctttacattttgtg-tcctttgaagaag--tcccgacatttcattaaatgtttttaaaatcctcacatttta 28838442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 27311117 - 27311060
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  27311117 ttacattttgcgcctctttaaagaatagtccctacatttcattaaatgtttttaaaat 27311060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 32092620 - 32092529
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||  |||||||||| ||| |||  |||  |  ||||||||||||||||||||||||||||||||||||||||||    
T  32092620 gggttaaatatgtttttagttcttacattttgtgcttcttcgaagtttcgtccctacatttcattaaatgtttttaaaatcctcacatttta 32092529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 23548053 - 23548119
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaa 156  Q
    ||||||||||| ||| ||||| ||| |||||||||| |||| |||||||||||||||||||||||||    
T  23548053 gggttaaatatgtttttagtccttatattttgcgcttctttgaagaataatccctacatttcattaa 23548119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 6621184 - 6621116
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| |  ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  6621184 ttacattttgtgaccctttgaagaatagtccctacatttcattaaatg-ttttaaaatcctcacatttta 6621116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 11992715 - 11992796
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctc 173  Q
    ||||||||| ||| || |||||| |||||||||  |||||||||||  ||||||||||| ||| ||||||||||||||||||    
T  11992715 gttaaatatgtttttaatctttatattttgcgcatctttaaagaattgtccctacattttatttaatgtttttaaaatcctc 11992796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 12908403 - 12908471
Alignment:
Q  113 tacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||||| ||| |  |||||||||||||||| | ||||||||||||||||||||||||||||    
T  12908403 tacattttacgctcatttgataaataatccctacatttaactaaatgtttttaaaatcctcacatttta 12908471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 10466870 - 10466779
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || |||||||||||||||    ||| ||||||| || ||| |||| ||||||||||||||||||| ||||||||||    
T  10466870 gggttaaatatgtttttaatctttacattttgcgtctatttgaagaatagtctctatattttattaaatgtttttaaaatcgtcacatttta 10466779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 5029767 - 5029842
Alignment:
Q  178 tttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||| |||||||||||||||| | ||||||||||||||    |||||||||||  ||||||||||||||||||    
T  5029767 tttaaaaacatttaatgaaatatagggactattcttcaaagagacgcaaaatgtaacgactaaaaatatatttaac 5029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 23549097 - 23549007
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||||| || |  ||||||||||||| | ||| ||||||| || ||| |||||||||||| ||||| ||||||||| ||||||    
T  23549097 ggttaaatatatttttatttcttacattttgcgcccttttgaagaatactctctatatttcattaaatctttttgaaatcctcaaatttta 23549007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 49053927 - 49053881
Alignment:
Q  135 aataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  49053927 aataatccctacatttcattaaaagtttttaaaatcctcacgtttta 49053881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 4152757 - 4152809
Alignment:
Q  128 tttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||  |||||||    
T  4152757 tttaaagaataatccctacattttattgaatgtttttaaaatccctacatttt 4152809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 11975150 - 11975063
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||| || || |||||||| | |||||||| || |||| ||  ||| ||| ||||||||||||||||||||||||||||||    
T  11975150 ttaaatatatttttaatccttacattt-gtgctcctttgaaaaatagtctttacgttttattaaatgtttttaaaatcctcacatttta 11975063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 20544398 - 20544311
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||| ||||| ||| ||||||| |   ||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  20544398 ttaaatatgtttttagtccttatattttgcacctttttgaagaatagtccttacatttcattaaatgtttttaaaat-ctcacatttta 20544311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 12933152 - 12933061
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| |||||  ||||||||| | |||||| |  |||| |||||| |||| | ||||||||| ||||||||||||||||||    
T  12933152 gggttaaatatgtttttagtccctacattttgtgttcctttgataaatagtccctatatttaagtaaatgtttctaaaatcctcacatttta 12933061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 30939655 - 30939565
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| |||||  |||||||| |||   ||  ||||||| ||||||||||||||||||| ||||||||||||  |||||||    
T  30939655 gggttaaatatgtttttagtccctacattttacgccatttcgaagaatagtccctacatttcattaaatatttttaaaatccctacatttt 30939565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 18443699 - 18443619
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||| | ||| |||||||||||||   |||  |||||| ||||||||||||| ||||||||||||||||||    
T  18443699 gggttaaatatgtttttggtccttacattttgcgc-gattttgagaatagtccctacatttcaataaatgtttttaaaatcc 18443619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 27310047 - 27310136
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||| ||| || ||  |||||||| ||| | ||  ||||||  ||||||||||||||||||||||||||||||||  |||||||    
T  27310047 ggttaaatatgtttttattccctacattttacgccctttcgaagaatggtccctacatttcattaaatgtttttaaaatccctacatttt 27310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 16755698 - 16755634
Alignment:
Q  116 attttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||  |||| ||||||| || ||| |||||||||||| ||||||||||||||| |||||    
T  16755698 attttgcgccactttgaagaatagtctctatatttcattaaatatttttaaaatcctcatatttt 16755634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 17075629 - 17075706
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  17075629 attttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaac 17075706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 34458772 - 34458835
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| |||||||||||||  | || ||| ||||||||||| ||||| |||||||||||||||    
T  34458772 taggcacaccttgtgcttgggaactgctgtttggtgtgttatttaattccattttgatttcttc 34458835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 33848346 - 33848309
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaat 169  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  33848346 aagaatagtccctacatttcaataaatgtttttaaaat 33848309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 18670694 - 18670634
Alignment:
Q  17 ggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||| |||||||||||||  | || ||  ||||||| ||||||||||||||||||||||||    
T  18670694 ggcacaccttgtgcttgggaactgctgcttggtgtgatatataatttcattttgatttctt 18670634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 32092306 - 32092229
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| |||||||||||||  | | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  32092306 attttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaac 32092229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 41800974 - 41800918
Alignment:
Q  22 accttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||||||||||  | || ||| ||||||||||| ||||| |||||||||||||||    
T  41800974 accttgtgcttggggactgctgtttggtgtgttatttaattccattttgatttcttc 41800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 9218604 - 9218513
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  9218604 gggttaaatatgtttttagtcattacattttgcgctcctttgaagaatagtccctatatttcattaaatgtttttaaaatcatcacatttta 9218513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 43933439 - 43933530
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||||| |||||||||| || | ||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  43933439 gggttaaatatatttttagtccttacattttgtgcccgtttgaagaatagtccctacatttcattaaatatttttaaaatcctcacatttta 43933530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 13637870 - 13637780
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| ||||| ||||||||||||| ||||| ||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  13637870 ggttaaatatgtttctagtccttacattttgcgcccctttgaagaatagtctctacatttcattaaatatttttaaaatcctcacatttta 13637780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 132150 - 132062
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatt 178  Q
    ||||||||||| | | ||||| ||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  132150 gggttaaatatgtatttagtccttacattttgcactcctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatt 132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 22814295 - 22814386
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || |  ||||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22814295 gggttaaatatgtttttaattcttacattttgcgcccctttgaagaatagtccatacatttcattaaatgtttttaaaatcctcacatttta 22814386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 37172084 - 37172171
Alignment:
Q  94 taaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||| ||| ||||| ||||||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  37172084 taaatatttttttagtccttacattttgcgcttatttaaagaatagtctctacatttcattaaatgtttttaaaatcctcacagttta 37172171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 44504477 - 44504386
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| | ||| ||||| ||||||||||| | ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  44504477 gggttaaatgtgtttttagtccttacattttgcacccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttta 44504386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 45683701 - 45683638
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45683701 taggcacaccttgtgcttggatattgctgtgtggtgtgttatataatttcattttgatttcttc 45683638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 9217845 - 9217910
Alignment:
Q  116 attttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9217845 attttgcgctgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 9217910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 17605434 - 17605497
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  17605434 taggcacaccttgtgcttggatattgctgtttggtgtgttatataatttcattttgatttcttc 17605497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 25770320 - 25770411
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||| ||||| ||| ||||| ||||||||||    ||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  25770320 gggttcaatatgtttttagtccttacattttgtatccctttgaagaatagtccctacatttcattaaatgtttttagaatcctcacatttta 25770411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 34743561 - 34743470
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| | | ||||| ||||| ||||||  ||||| |||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  34743561 gggttaaatatgtatctagtccttacactttgcgtccctttgaagaattatccttacatttcattaaatgttttaaaaatcctcacatttta 34743470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 48867649 - 48867740
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||  |||||  ||||||||||||| ||||||| |||| ||||||||||||| ||||| ||||||||||||| ||||||||    
T  48867649 gggttaaatatgttattagtccctacattttgcgctactttaaataatagtccctacatttcaataaatatttttaaaatccttacatttta 48867740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 51471334 - 51471425
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||  ||||  ||||||||||||  ||||| ||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  51471334 gggttaaatatgttcttagttcttacattttgcgtccctttgaagaatagtttctacatttcattaaatgtttttaaaatcctcacatttta 51471425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 51755968 - 51755914
Alignment:
Q  127 ctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51755968 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 51755914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 50732246 - 50732315
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||||||| || |||| ||| ||||||||||||||| |||||||||||||| |||||||    
T  50732246 ttacattttgcgctcctttgaaaaatagtccatacatttcattaaatatttttaaaatcctcgcatttta 50732315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 50780609 - 50780540
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||||||| || |||| ||| ||||||||||||||| |||||||||||||| |||||||    
T  50780609 ttacattttgcgctcctttgaaaaatagtccatacatttcattaaatatttttaaaatcctcgcatttta 50780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 33225490 - 33225578
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||| |||||| |||||||| ||||||||| |  |||| ||||||||||| | |||||||||||||||||| |||||||||    
T  33225490 ttaaatatgtttttagtctctacattttacgctcctttgataaatagtccctacatttaagtaaatgtttttaaaatccccacatttta 33225578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 48868678 - 48868587
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||  |||||  ||||||||||||| |||| || |||| ||||||||||||| ||||||||||||||||||  ||||||||    
T  48868678 gggttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttta 48868587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 44504133 - 44504182
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  44504133 aagaatagtccctacatttcattaaatatttttaaaatcctcacatttta 44504182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 9218525 - 9218602
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| |||||||||||||||| | ||||||||||||||    |||||||||||| |||||||| |||||||||    
T  9218525 attttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatgtaatgactaaaaacatatttaac 9218602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 25770804 - 25770728
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    |||||||| ||| || || ||||||||||| ||| ||| ||||||| | ||||||||| ||||||||||||||||||    
T  25770804 ttaaatatgtttttaatccttacattttgcactcatttgaagaatagttcctacattttattaaatgtttttaaaat 25770728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 37172567 - 37172476
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| || || || | |||| ||  ||||| ||||||||| |||||| || |||||||||||||||||||  |||||||||    
T  37172567 gggttaaatatatttttaatccttgcgttttacgtccctttgaagaataattcctacactttattaaatgtttttaaaatctccacatttta 37172476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 46690161 - 46690114
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  46690161 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 46690114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 26741391 - 26741304
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| |||  |||| |||| |||||||| ||||| ||||||| ||  ||||||||||    ||||||||||||||||||||||||    
T  26741391 gggttaaatatgttttaagtccttacgttttgcgcccctttgaagaatagtctttacatttcat----tgtttttaaaatcctcacatttta 26741304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 27013412 - 27013499
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| |||||||||||||||| |    | | ||||||| | ||| ||||| ||||||||||||||||||||| ||||||||    
T  27013412 gggttaaatatgtttttagtctttacattttgag----tctgaagaatagttcctgcattttattaaatgtttttaaaatccttacatttta 27013499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 43933816 - 43933728
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| | ||||||||||  | ||| || |||| || |||| ||||||||||||||||||||||||||| ||||||    
T  43933816 gttaaatatgtttttagtcctcacattttgcgtccatttgaaaaatagtctctac-tttcattaaatgtttttaaaatcctcatatttta 43933728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 45728408 - 45728335
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttt 163  Q
    ||||||||||| ||| ||||| |||||||||| |  ||||| ||||||| ||| ||||||||||||||| ||||    
T  45728408 gggttaaatatgtttttagtccttacattttgtgtccctttgaagaatagtccatacatttcattaaatatttt 45728335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 13637478 - 13637565
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||| || ||||||||||||||||| |||| || |||| ||  | ||||||||||||| ||||||||||| ||| ||||||    
T  13637478 ttaaatatgtttttaatctttacattttgcgcttctttgaataatagtct-tgcatttcattaaatatttttaaaatcttcatatttta 13637565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 22814374 - 22814297
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||    |||||||||||  | |||||| |||||||||    
T  22814374 attttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaattaaaaacatatttaac 22814297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 45539249 - 45539297
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  45539249 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 45539297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 45539689 - 45539641
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  45539689 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 45539641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 51508007 - 51507919
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||| ||||| ||||||||| ||||| ||| |  |||| | ||||||||| | |||||||||||||| |||| ||||||||    
T  51508007 ttaaatatgtttttagtccttacattttacgctcttttgataaatagttcctacatttaagtaaatgtttttaaagtccttacatttta 51507919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 18369570 - 18369633
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| ||||| |||||||  |||| ||| |||| || |||||||||||||||||||||||||    
T  18369570 taggcacaccttatgcttgggaattgctgtttggtatgatatataatttcattttgatttcttc 18369633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 77
Target Start/End: Complemental strand, 36708380 - 36708349
Alignment:
Q  46 tggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||||||||||||||||||||    
T  36708380 tggtgtgttatataatttcattttgatttctt 36708349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 36899295 - 36899342
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  36899295 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 36899342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 38485699 - 38485778
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcct 172  Q
    ||||||||  || ||||| |||||||||| ||  |||| ||||||| ||| ||||||| |||| ||||||||||||||||    
T  38485699 ttaaatatgattttagtccttacattttgtgcctctttgaagaatagtccatacattttattatatgtttttaaaatcct 38485778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 42606321 - 42606368
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  42606321 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 42606368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 46689723 - 46689770
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  46689723 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 46689770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 3799722 - 3799812
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| |||||  |||||||| ||||| ||| |  |||| || |||||||| | ||||||||||||||||||  ||||||||    
T  3799722 ggttaaatatctttttagtccctacattttacgctcttttgataaatagtctctacatttaagtaaatgtttttaaaatccctacatttta 3799812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 4199934 - 4199896
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  4199934 agaatagtccctacatttcaataaatgtttttaaaatcc 4199896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 33227011 - 33226933
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatc 170  Q
    ||||||||| ||  |||||  |||||||||||||||||| |  |||| |||||| |||| | |||||||||||||||||    
T  33227011 gttaaatatgttcttagtccctacattttgcgctcctttgataaatagtccctatatttaagtaaatgtttttaaaatc 33226933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 36899733 - 36899695
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  36899733 agaatagtccctacatttcaataaatgtttttaaaatcc 36899695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 42676052 - 42676114
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||||| |||||||||||||  | || ||| ||||||||||| ||||| ||||||||||||||    
T  42676052 taggcacaccttgtgcttggggactgctgtttggtgtgttatttaattccattttgatttctt 42676114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 27013487 - 27013414
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaaggcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| |||||||| ||||  | ||||||||||||| |  ||||||||||  |||||||| |||||||||    
T  27013487 attttaaaaacatttaataaaatgcaggaactattcttcagactcaaaatgtaaagactaaaaacatatttaac 27013414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 35300788 - 35300833
Alignment:
Q  135 aataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||| ||||||||| ||||||||||||||||||  |||||||    
T  35300788 aataatccttacatttcaataaatgtttttaaaatccctacatttt 35300833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 45728340 - 45728406
Alignment:
Q  187 atttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatatttaac 249  Q
    |||||||||||| |||| |||||||||||||||    ||||||||||  |||||||| |||||||||    
T  45728340 atttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatatttaac 45728406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 132071 - 132148
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||| | |||||||||    
T  132071 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggagtgcaaaatgtaaggactaaatacatatttaac 132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 43933518 - 43933441
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatatttaac 249  Q
    |||||||||  |||||||||||| || | ||||||||||||| |    ||||||||||  ||||||||||||||||||    
T  43933518 attttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaaatatatttaac 43933441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 44504398 - 44504475
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| | |||||||    
T  44504398 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacatttaac 44504475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 51471413 - 51471336
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| ||  |||||||||||||||    |||||||||||  ||||| || |||||||||    
T  51471413 attttaaaaacatttaatgaaatgtagaaactattcttcaaagggacgcaaaatgtaagaactaagaacatatttaac 51471336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 51505955 - 51506031
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaa 167  Q
    |||||||||||||| || ||  |||||||| ||||| ||| |  |||| ||||||||||| | ||||||||||||||    
T  51505955 ggttaaatatatttttaatccctacattttacgctcttttgataaatagtccctacatttaagtaaatgtttttaaa 51506031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 7e-28; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 2517412 - 2517503
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||||| ||||||||||||   |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2517412 gggttaaatatatttttagtccttacattttgcgtctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 2517503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 21216922 - 21217013
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21216922 gggttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 21217013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 21217412 - 21217321
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21217412 gggttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 21217321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 21264990 - 21265081
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21264990 gggttaaatatgtttttagtccttacattttgcgccgctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 21265081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 21265480 - 21265389
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21265480 gggttaaatatctttttagtccttacattttgcgcctctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 21265389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 2191217 - 2191307
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| ||||| ||||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  2191217 ggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttta 2191307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 21267459 - 21267368
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||| || |||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21267459 gggttaaatatgtttttagtccttacatttttcgatcctttgaagaatagtccctacatttcattaaatgttttaaaaatcctcacatttta 21267368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 24093155 - 24093242
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacat 177  Q
    ||||||||||| ||| ||||| ||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  24093155 gggttaaatatgtttttagtccttacactttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacat 24093242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 28401164 - 28401227
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28401164 taggcataccttgtgcttggatattgctgtgtggtgtgttatataatttcattttgatttcttc 28401227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 3691480 - 3691389
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||  ||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  3691480 gggttaaatatgtttttagtccttgtattttgcgcccctttgaagaatagtccctacatttcattaaatgtttttaaaatcttcacatttta 3691389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 21182306 - 21182397
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||  ||||||||||    
T  21182306 gggttaaatatgtttttagtccttacattttgcgcccctttgaagaatagtccttacatttcattaaatgtttttaaaattttcacatttta 21182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 32114562 - 32114471
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||||| |||||||||||||  ||| |||||||| ||| ||||||||||||||| |||||||||| |||||| ||||    
T  32114562 gggttaaatatatttttagtccttacattttgcgcctcttcaaagaatagtccttacatttcattaaatatttttaaaattctcacacttta 32114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 3691093 - 3691173
Alignment:
Q  101 atttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||| ||||| ||| ||||||||| | ||| ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3691093 atttttagtccttatattttgcgcccttttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacatttta 3691173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 32114165 - 32114255
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||| ||| ||||| ||||||| |||||||| |  ||||||||||||||||||||||||||||||    
T  32114165 gggttaaatatgtttttagtccttacattttacgc-cctttgaagaatagtccctacaatctattaaatgtttttaaaatcctcacatttta 32114255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 23222954 - 23222864
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| |||||  ||||||||||||  ||||||| |||| ||| ||||||||| || ||||||||||||||||||||||||    
T  23222954 gggttaaatatgtttttagtccctacattttgcgcaactttaaataatagtccttacatttcaatatatgtttttaaaatcctcacatttt 23222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 7083525 - 7083612
Alignment:
Q  94 taaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||| ||| || || ||||||||| ||  | ||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  7083525 taaatatgtttttaatccttacattttacgtccatttgaagaatagtccctacatttcattaaatttttttaaaatcctcacatttta 7083612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 10706724 - 10706651
Alignment:
Q  106 tagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||| ||||||||||||| ||||| ||||||| ||  || |||||||||||| ||||||||||||||||||||||    
T  10706724 tagtccttacattttgcgcccctttgaagaatagtc--tatatttcattaaatatttttaaaatcctcacatttta 10706651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 2035607 - 2035698
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| | |||  || ||||| | ||| ||||||||||||||||||||||| | ||||||||||||||||||  ||||||||    
T  2035607 gggttaaatatgtttttggtccctatattttaccctcttttaaagaataatccctacattttaataaatgtttttaaaatccctacatttta 2035698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 16212711 - 16212648
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| |||||||||||||| | || ||  |||||||||||||||||||||||||||||||||    
T  16212711 taggcagaccttgtgcttggaaactgctgcttggtgtgttatataatttcattttgatttcttc 16212648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 32860813 - 32860904
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||| ||||| ||||||||  ||||| || |||| ||  || |||||||||||||||||||||||||| ||||||||    
T  32860813 gggttaaatatgtttttagcctttatattttgcgtccctttgaaaaatagtcgttatatttcattaaatgtttttaaaatcctaacatttta 32860904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 18107516 - 18107435
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||| |||||  | |||||||||   |||||||||||||||| ||||||| | ||||||||||||||||||    
T  18107516 gggttaaatatgtttttagtccctgcattttgcgtgactttaaagaataatccttacattttaataaatgtttttaaaatcc 18107435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 2517491 - 2517414
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  ||||||||||||||||||    
T  2517491 attttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaaaatatatttaac 2517414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 10709474 - 10709564
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| | ||||||| ||||||||    ||| ||||||| ||| ||||||||| ||||||||||||||||||  |||||||    
T  10709474 gggttaaatatgtttttggtctttagattttgcgtgattttgaagaatagtccttacatttcaataaatgtttttaaaatccctacatttt 10709564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 24093625 - 24093556
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| | | ||| ||||||| | |||| |||| ||||||||||||||||||||| ||||||||    
T  24093625 ttacattttgcacccatttgaagaatagtgcctatattttattaaatgtttttaaaatccttacatttta 24093556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 2191295 - 2191218
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  2191295 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 2191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 21182385 - 21182308
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaac 21182308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 21217001 - 21216924
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21217001 attttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaac 21216924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 21217333 - 21217410
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21217333 attttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaac 21217410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 21265069 - 21264992
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21265069 attttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaaacatatttaac 21264992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 21265401 - 21265478
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    |||||||||||  |||||||| |||||||||    
T  21265401 attttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaac 21265478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 1804273 - 1804320
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  1804273 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 1804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 1804711 - 1804664
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  1804711 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 1804664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 2036656 - 2036613
Alignment:
Q  128 tttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||    
T  2036656 tttaaagaatagtccctacatttcaattaatgtttttaaaatcc 2036613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 2606695 - 2606656
Alignment:
Q  142 cctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  2606695 cctacatttcattaaatgtttttaaaattctcatatttta 2606656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 77
Target Start/End: Complemental strand, 3952801 - 3952770
Alignment:
Q  46 tggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||||||||||||||||||||    
T  3952801 tggtgtgttatataatttcattttgatttctt 3952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 6476128 - 6476175
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  6476128 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 6476175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 6476566 - 6476519
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  6476566 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 6476519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 11450797 - 11450844
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| |||||||||| |||||||  |||||||    
T  11450797 agaataatccctacatttcaataaatgttttaaaaatccctacatttt 11450844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 11451235 - 11451188
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  11451235 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 11451188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 27377690 - 27377737
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  27377690 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 27377737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 27378128 - 27378081
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| |||||||||| |||||||  |||||||    
T  27378128 agaataatccctacatttcaataaatgttttaaaaatccctacatttt 27378081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 77
Target Start/End: Complemental strand, 37642993 - 37642962
Alignment:
Q  46 tggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||||||||||||||||||||    
T  37642993 tggtgtgttatataatttcattttgatttctt 37642962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 39097005 - 39096958
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  39097005 agaataatccttacatttcaataaatgtttttaaaatccctacatttt 39096958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 3624967 - 3624925
Alignment:
Q  127 ctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||    
T  3624967 ctttgaagaatagtccctacatttcaataaatgtttttaaaat 3624925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 39729640 - 39729606
Alignment:
Q  147 atttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||| ||||||||||||||||||||||    
T  39729640 atttcattaaatatttttaaaatcctcacatttta 39729606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 3691161 - 3691120
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaa 217  Q
    ||||||||| ||||||||||||| || |||||||||||||||    
T  3691161 attttaaaaacatttaatgaaatgtaggaactattcttcaaa 3691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 24093234 - 24093157
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | ||||||||||||||    ||||| |||||  |||||||| |||||||||    
T  24093234 attttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaaacatatttaac 24093157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 3591428 - 3591337
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  3591428 gggttaaatatatttttagtccttacattttgcgctcatttgaagaatagtccatacattttattaaatgtttttaaaatcctcacatttta 3591337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 5172744 - 5172835
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||  ||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  5172744 gggttaaatatgtttttagttcttacattttgcgctcatttgaagaatagtctctacatttcattaaatgtttttaaaatccttacatttta 5172835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 9880483 - 9880574
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||   ||||| ||||| | || |||||||||||||||||||||||||||||||||||||||    
T  9880483 gggttaaatatgtttttagtccttacattttgcatccctttgaagaaaagtctctacatttcattaaatgtttttaaaatcctcacatttta 9880574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 1501072 - 1500982
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| |||||  || ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  1501072 gggttaaatatgtttttagtccctatattttgcgctcttttgaagaatagtccctacatttcattaaatgtttttaaaatccctacatttt 1500982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 6751445 - 6751353
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttg-cgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||| ||  ||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||    
T  6751445 gggttaaatatgtttttagtcattacattttggcgtccctttaaagaaaagtccttacatttcattaaatttttttaaaatcctcacatttta 6751353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 18180369 - 18180278
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || |||||| |||||||||  |||| ||||||| ||| ||||||| ||||||||||||||||||||||| ||||||    
T  18180369 gggttaaatatgtttttaatctttatattttgcgccactttgaagaatagtccatacattttattaaatgtttttaaaatcctcatatttta 18180278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 19895399 - 19895490
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||  |||| ||| ||||||| ||| ||||||| ||||||||||||||||| ||||||||||||    
T  19895399 gggttaaatatgtttttagtccttacattttatgctcgtttgaagaatagtccatacatttaattaaatgtttttaaaaccctcacatttta 19895490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 50359530 - 50359439
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || || ||||||||||||| | ||| ||||||| ||| |  |||||||||||||||||||||||||||||||||||    
T  50359530 gggttaaatatgtttatattccttacattttgcgcccatttgaagaatagtccttttatttcattaaatgtttttaaaatcctcacatttta 50359439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 5683161 - 5683251
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| || || ||||||||||||   |||| || |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  5683161 ggttaaatatgtttttaatccttacattttgcgtctctttgaaaaatagtccctacatttcattaaatgtatttaaaatcctcacatttta 5683251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 48155368 - 48155279
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| || || ||| ||||||||||||||| ||||||  | |||| |||||||||||||||||||||||| ||||||||||    
T  48155368 gttaaatatgtttttaatccttatattttgcgctcctttgaagaattgttcctatatttcattaaatgtttttaaaatcttcacatttta 48155279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 18179878 - 18179969
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| || ||| ||||| ||||||||||| | ||||| || |||| ||| || |||||||||| ||||||||||||||||||||||||    
T  18179878 gggttaaacatgtttttagtccttacattttgcacccctttgaaaaatagtccttatatttcattaattgtttttaaaatcctcacatttta 18179969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 47541553 - 47541608
Alignment:
Q  126 cctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  47541553 cctttgaagaatagtccctatatttcattaaatgtttttaaaatcctcacatttta 47541608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 50359124 - 50359215
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||| |||||||||   ||  ||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  50359124 gggttaaatatttttttagtccttatattttgcgccaattcgaagaatagtccctacatttcattaaatgttttttaaatcttcacatttta 50359215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 4288525 - 4288440
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| ||||| ||| ||||||||| ||||| ||||||| ||||||||||     |||||||||||||||||||||||||||    
T  4288525 ggttaaatatgtttttagtccttatattttgcgcccctttgaagaatagtccctacatt-----aaatgtttttaaaatcctcacatttta 4288440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 42723350 - 42723255
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacat----ttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| || || ||| ||||||||||||||||||||||||| | || ||    || ||||||||||||||||||||||||||||||    
T  42723350 gggttaaatatgtttttaatccttatattttgcgctcctttaaagaataattcatatatttaatttattaaatgtttttaaaatcctcacatttta 42723255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 45664686 - 45664776
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| |||||  |||||||| ||||| ||| ||||||| || |||||||| | |||||||||||||||||| ||||||||    
T  45664686 gggttaaatatgtttttagtccctacattttacgctcatttgaagaatagtctctacattttaataaatgtttttaaaatccccacatttt 45664776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 12869745 - 12869664
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||| | |||  || ||||| | ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12869745 gggttaaatatgtttttggtccctatattttaccctcctttaaagaatagtccctacatttcaataaatgtttttaaaatcc 12869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 6751049 - 6751137
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| | | |||||||||||||||| ||  |||| ||||||||||| || ||||||||||||||||| |||||| || |||||||    
T  6751049 ttaaatatgtgtttagtctttacattttgtgcctctttgaagaataatccttatatttcattaaatgttttaaaaatcatcgcatttta 6751137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 19976166 - 19976254
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||| ||||| |||||||||||||| |||| ||||||| | | ||  ||| |||||||||||||||||||| |||||||||    
T  19976166 ttaaatatgtttttagtcgttacattttgcgcttctttgaagaatagttcttattttttattaaatgtttttaaaatccccacatttta 19976254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 9880880 - 9880790
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| || |  ||||||||||||||| ||| ||||||| |  ||| |||| |||||||||||||||||| |||||||||||    
T  9880880 ggttaaatatgtttttaattcttacattttgcgctcatttgaagaatagtttctatattttattaaatgtttttaaaattctcacatttta 9880790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 1500096 - 1500139
Alignment:
Q  128 tttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  1500096 tttaaagaatagtccctacatttcattgaatgtttttaaaatcc 1500139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 5683652 - 5683569
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctc 173  Q
    ||||||||||| ||| ||||| ||| ||||| ||    ||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  5683652 gggttaaatatgtttttagtccttatattttacgtctttttgaagaatagtccctacatttcattaaatatttttaaaatcctc 5683569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 32266962 - 32266915
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  32266962 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 32266915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 40124555 - 40124508
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  40124555 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 40124508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 12868455 - 12868513
Alignment:
Q  113 tacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    |||||||| | ||||||||||||||| | ||||||||||| ||||| ||||||||||||    
T  12868455 tacattttaccctcctttaaagaatagttcctacatttcaataaatatttttaaaatcc 12868513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 48154974 - 48155063
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||| ||| || || ||| ||||| |||  |||||| ||||| ||| ||||||| ||||||||||||||||||||||| ||||||    
T  48154974 ggttaaatatgtttttaatccttatattttacgccgctttaa-gaatagtccttacattttattaaatgtttttaaaatcctcatatttta 48155063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 3591349 - 3591426
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaa----ggcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| |||||||| |||| |||| |||||||||||||     |||||||||||  ||||||||||||||||||    
T  3591349 attttaaaaacatttaataaaatgtatggactattcttcaaatgagcgcaaaatgtaaggactaaaaatatatttaac 3591426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 8997382 - 8997429
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  8997382 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 8997429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 19976242 - 19976166
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaa 248  Q
    ||||||||| |||||||| ||| ||| ||||||||||||||||    |||||||||||  |||||||| ||||||||    
T  19976242 attttaaaaacatttaataaaaaataagaactattcttcaaagaagcgcaaaatgtaacgactaaaaacatatttaa 19976166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 31436474 - 31436383
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||  || ||||| |||||||||| |  | ||| ||||||| || ||| |||| ||||||||||||||||||  ||||||||||    
T  31436474 gggttaaatatgattttagtccttacattttgtgtccttttgaagaatagtcactatattttattaaatgtttttaaaattatcacatttta 31436383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 32266524 - 32266571
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  32266524 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 32266571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 77
Target Start/End: Original strand, 34854285 - 34854316
Alignment:
Q  46 tggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||||||||||||||||||||    
T  34854285 tggtgtgttatataatttcattttgatttctt 34854316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 40124117 - 40124164
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  40124117 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 40124164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 77
Target Start/End: Original strand, 43510435 - 43510466
Alignment:
Q  46 tggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||||||||||||||||||||    
T  43510435 tggtgtgttatataatttcattttgatttctt 43510466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 47410464 - 47410511
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  47410464 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 47410511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 47410902 - 47410855
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  47410902 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 47410855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 47541596 - 47541553
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaagg 219  Q
    ||||||||| |||||||||||||||| | |||||||||||||||    
T  47541596 attttaaaaacatttaatgaaatatagggactattcttcaaagg 47541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 48155291 - 48155334
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaagg 219  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||    
T  48155291 attttaaaaacatttaatgaaatataggaacaattcttcaaagg 48155334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 36793665 - 36793575
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| |||||  || ||||||||   |||| ||||||| || |||||||| | ||||||||||||||||||  |||||||    
T  36793665 gggttaaatatgtttttagtccctatattttgcgtgactttgaagaatagtctctacattttaataaatgtttttaaaatccctacatttt 36793575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 37927519 - 37927593
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgttttt 164  Q
    ||||||||||| ||| ||||||||| ||||| |||||  || ||||||| || |||||||| ||||||| |||||    
T  37927519 gggttaaatatgtttttagtctttatattttacgctctattgaagaatagtctctacatttgattaaatattttt 37927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 19895849 - 19895800
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||| || |||||||| |||||||||||||||||| |||| ||||||    
T  19895849 aagaatagtctctacattttattaaatgtttttaaaattctcatatttta 19895800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 3935779 - 3935694
Alignment:
Q  96 aatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||||| || |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3935779 aatatatttttagtcctttcattttacgctcctttgaagaataatccctacatttcattaattgtttttaaaatcctcacatttta 3935694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 87018 - 87107
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacattt 179  Q
    ||||||||||| ||| ||||||||| |||||||| || | | |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  87018 gggttaaatatgtttttagtctttatattttgcgttcatctgaagaataacccctacatttcattaaatgtttttaaaatcttcacattt 87107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 87350 - 87261
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| ||| |||||| |  ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  87350 gttaaatatgtttttagtccttatattttgtgtccctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatttta 87261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 31588438 - 31588346
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcg-ctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||| | ||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  31588438 gggttaaatatgtttttagtccttacattttgcgtcccctttgaagaatagtccctacatttcattaaatatttttaaaatcctaacatttta 31588346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 18999365 - 18999456
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||||||||||| ||| ||| ||||||| ||| ||||||||||||||| |||||||||||||| |||||||    
T  18999365 gggttaaatatgtttttagtccttacattttgcactcttttgaagaatagtccatacatttcattaaatatttttaaaatcctctcatttta 18999456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 22231251 - 22231164
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacat 177  Q
    ||||||||||| ||| ||||| ||| ||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||| ||||    
T  22231251 gggttaaatatgtttttagtccttatattttgcgcccctttaaagaatagtccctatatttcattaaatgtttttgaaatcctgacat 22231164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 3169138 - 3169200
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  3169138 taggcacaccttgtgcttggatattgctgtttggtgtgttatataatttcattttgatttctt 3169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 30415574 - 30415485
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||  || ||||| ||||||||| ||||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  30415574 gggttaaatatggttttagtccttacattttacgctccttcgaagaatagtccctacatttcatt-aatgtttttaaaatcctcacatttt 30415485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 8750449 - 8750360
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| |||||||||||| | |||| ||||||| ||||||||||| ||||||||| ||||||||||||| ||||||    
T  8750449 gttaaatatgtttttagtccttacattttgcgtttctttgaagaatagtccctacattttattaaatgtgtttaaaatcctcatatttta 8750360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 18339094 - 18339163
Alignment:
Q  112 ttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||| ||||| ||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  18339094 ttacattttgcgcccctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacatttta 18339163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 4187927 - 4187837
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| |||||  ||||||||||||  ||||||| |||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  4187927 gggttaaatatgtttttagtccctacattttgcgcaactttaaataatagtccttacatttcaataaatatttttaaaatcctcacatttt 4187837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 8750009 - 8750089
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatc 170  Q
    ||||||||||| ||| || |  ||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||||    
T  8750009 gggttaaatatgtttttaattcttacattttgcgcccctttgaataataatccctacatttcattaaatatttttaaaatc 8750089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 18340740 - 18340661
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatc 170  Q
    ||||||||||  || ||||| |||||| |||||| ||||| ||||||| ||| |||||||||||||||||||||||||||    
T  18340740 ggttaaatatgattttagtccttacatgttgcgccccttttaagaatagtccttacatttcattaaatgtttttaaaatc 18340661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 18999731 - 18999640
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| |||||||||||     ||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  18999731 gggttaaatatgtttttagtccttacattttgcttcattttgaagaatagtccatacatttcattaaatatttttaaaatcctcacatttta 18999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 31176506 - 31176597
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||||| ||| ||||||||  ||||| ||||| | ||| ||||||||||||||||||||||||||| ||| ||||||    
T  31176506 gggttaaatatgtttttagtccttatattttgcgtccctttgaagaacagtccatacatttcattaaatgtttttaaaatcgtcatatttta 31176597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 29740743 - 29740801
Alignment:
Q  19 cataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  29740743 cataccttatgcttggatattactgtttggtgtgttatataatttcattttgatttctt 29740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 119009 - 119099
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| | |||  |||||||||| |||||||||  |||| ||| ||||||||| ||||||||||||||||||  |||||||    
T  119009 gggttaaatatgtttttggtccctacattttgccctcctttaataaatagtccttacatttcaataaatgtttttaaaatccctacatttt 119099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 8648155 - 8648066
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctccttta-aagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||  || ||||| |||||||||||| ||||||  ||||||| ||  ||||||||||||||| |||||||||||||||||||||    
T  8648155 ggttaaatatgattttagtccttacattttgcg-tcctttggaagaatagtctttacatttcattaaatatttttaaaatcctcacatttt 8648066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 119183 - 119264
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||| ||| | ||| ||| ||||||||   |||||||||||| ||| ||||||||| ||||||||||||||||||    
T  119183 gggttaaatatgtttttggtccttagattttgcgtgactttaaagaatagtccttacatttcaataaatgtttttaaaatcc 119264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 13987284 - 13987373
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatg-tttttaaaatcctcacatttta 181  Q
    |||||||| ||| ||||  |||||||| |||| | ||| |||||||||| ||| ||||||||||||| |||||||||| |||||||||||    
T  13987284 ttaaatatgtttttagttcttacatttcgcgcccttttgaagaataatctctatatttcattaaatgttttttaaaattctcacatttta 13987373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 16284275 - 16284364
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| |||||||||||| |  ||| ||||||| ||  || |||| ||||||||||||||||||||||| ||||||    
T  16284275 gttaaatatgtttttagtccttacattttgcgtttttttgaagaatagtctttatattttattaaatgtttttaaaatcctcatatttta 16284364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 30351772 - 30351716
Alignment:
Q  113 tacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    |||||||| | ||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  30351772 tacattttaccctcctttaaagaatagtccctacatttcaataaatatttttaaaat 30351716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 38356996 - 38356935
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| ||||||||||||| ||||| ||| ||||||  |||||||||||||||||||||||||    
T  38356996 taggcacaccttgtgcttgggtattgctgtttggtgt--tatataatttcattttgatttcttc 38356935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 6543894 - 6543847
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  6543894 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 6543847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 28641202 - 28641249
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  28641202 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 28641249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 35373454 - 35373538
Alignment:
Q  91 ggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||||| ||||| |||||||||| |  ||||| |||||      |||||||||||||||| ||||||||||||||| ||||||    
T  35373454 ggttaaatatatttttagtccttacattttgtgtccctttgaagaa------ctacatttcattaaatatttttaaaatcctcatatttta 35373538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 120049 - 119959
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||||||| ||| | |||  |||||||||| || |||| |  |||| ||| ||||||||| ||||||||||||||||||| |||||||    
T  120049 gggttaaatatgtttttggtccctacattttgcccttctttgacaaatagtccttacatttcaataaatgtttttaaaatccttacatttt 119959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 3406537 - 3406499
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttc 214  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  3406537 attttaaaaacatttaatgaaatatatgaactattcttc 3406499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 11817318 - 11817256
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttctt 77  Q
    |||||| ||||| |||||||| |||| ||| ||||||||||| || |||||||||||||||||    
T  11817318 taggcacaccttatgcttggacattgctgtttggtgtgttatttattttcattttgatttctt 11817256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 14626152 - 14626090
Alignment:
Q  118 tttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||  ||||||| |||| ||||||||||||| ||||||||||||||||||  |||||||    
T  14626152 tttgcgcgactttaaaaaatagtccctacatttcaataaatgtttttaaaatccctacatttt 14626090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 35383292 - 35383330
Alignment:
Q  143 ctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  35383292 ctacatttcattaaatgtttttaaaatcctcatatttta 35383330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 3879294 - 3879214
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcc 171  Q
    ||||||||||||||| | |||  ||||||||||||   |||  |||||||||||||||||||| | ||||||||||||||||    
T  3879294 gggttaaatatatttttggtccctacattttgcgc-gattttgagaataatccctacatttcaatgaatgtttttaaaatcc 3879214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 18339391 - 18339314
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaa 167  Q
    ||||||||||||||| | ||| ||||||||| || |  ||| ||||||||||| ||||||| | ||||||||||||||    
T  18339391 gggttaaatatatttttggtccttacattttacgttattttgaagaataatccttacattttaataaatgtttttaaa 18339314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 21949880 - 21949832
Alignment:
Q  132 aagaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  21949880 aagaatagtccctacatttcaataaatgtttttaaaatccctacatttt 21949832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 2893715 - 2893652
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgatttcttc 78  Q
    |||||| |||||||||||||  | || ||| ||||||||||| ||||| |||||||||||||||    
T  2893715 taggcacaccttgtgcttgggaactgctgtttggtgtgttatttaattccattttgatttcttc 2893652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 5746802 - 5746849
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| |||||||||| |||||||  |||||||    
T  5746802 agaataatccctacatttcaataaatgttttaaaaatccctacatttt 5746849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 5747240 - 5747193
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  5747240 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 5747193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 6543456 - 6543503
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  6543456 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 6543503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 21949441 - 21949488
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  21949441 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 21949488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 28641640 - 28641593
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  28641640 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 28641593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 31162462 - 31162509
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  31162462 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 31162509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 31162900 - 31162853
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  31162900 agaataatccttacatttcaataaatgtttttaaaatccctacatttt 31162853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 38834819 - 38834780
Alignment:
Q  140 tccctacatttcattaaatgtttttaaaatcctcacattt 179  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  38834819 tccctacatttcattaaatgtttttaaaattcacacattt 38834780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 39402253 - 39402300
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  39402253 agaatagtccctacatttcaataaatgtttttaaaatccctacatttt 39402300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 1650006 - 1650082
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    ||||||||| ||| |||| |||| ||||||||| | ||| ||||||| |  |||||||| ||||||||||||||||||    
T  1650006 gttaaatatgtttttagtatttatattttgcgc-catttgaagaatattatctacattttattaaatgtttttaaaat 1650082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 181
Target Start/End: Original strand, 3935451 - 3935480
Alignment:
Q  152 attaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||||||||||||||||||    
T  3935451 attaaatgtttttaaaatcctcacatttta 3935480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 20892633 - 20892545
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| || || ||| |||||||| || ||| ||||||| || |||| ||| ||||||||||||||||||  ||||||||||    
T  20892633 gttaaatatgtttttaatccttaaattttgcg-tcatttgaagaatagtctctacgtttaattaaatgtttttaaaattatcacatttta 20892545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 37813376 - 37813453
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaat 169  Q
    ||||||||||||| |||||  |||| ||| |||   ||| ||||||| ||| ||||||||||||| ||||||||||||    
T  37813376 gttaaatatatttttagtccctacagtttacgccattttgaagaatagtccatacatttcattaagtgtttttaaaat 37813453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 87273 - 87350
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaagg----caaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| || | |||||||||||||||    |||||| |||  |||||||| |||||||||    
T  87273 attttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaaaacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 18999444 - 18999367
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaa----ggcaaaatgtaattactaaaaatatatttaac 249  Q
    |||||||||  |||||||||||| |||| |||||||||||||     |||||||||||  |||||||| |||||||||    
T  18999444 attttaaaaatatttaatgaaatgtatggactattcttcaaaagagtgcaaaatgtaaggactaaaaacatatttaac 18999367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 18999652 - 18999729
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    |||||||||  |||||||||||| |||| |||||||||||||     |||||||||||  |||||||| |||||||||    
T  18999652 attttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaac 18999729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 31176585 - 31176508
Alignment:
Q  176 attttaaaagcatttaatgaaatatatgaactattcttcaaag----gcaaaatgtaattactaaaaatatatttaac 249  Q
    ||||||||| ||||||||||||| |||| ||| ||||||||||    ||||||| |||  |||||||| |||||||||    
T  31176585 attttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaaacatatttaac 31176508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 108210 - 108122
Alignment:
Q  93 ttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||| ||| ||||| ||||||||||||| | ||| |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  108210 ttaaatatgtttttagtccttacattttgcgcccttttgaagaattattcctacatttcattaaatgtttttaaaatcctcacatttta 108122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 107721 - 107812
Alignment:
Q  90 gggttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||| ||| ||| | ||||| ||||||||||||| ||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  107721 gggttaaatatgtttttagaccttacactttgcgctcctttgaagaatagtccctacatttcaataaatatttttaaaatcctcacatttta 107812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 35281 - 35192
Alignment:
Q  92 gttaaatatatttgtagtctttacattttgcgctcctttaaagaataatccctacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||| ||| ||||| ||||||||||||  ||||| ||||||| || |||||||| ||| ||||||||||||||||||||||||||    
T  35281 gttaaatatgtttttagtccttacattttgcgtccctttgaagaatagtctctacattttattgaatgtttttaaaatcctcacatttta 35192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 34845 - 34882
Alignment:
Q  144 tacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    |||||||||||||||||||||||| | |||||||||||    
T  34845 tacatttcattaaatgtttttaaagtactcacatttta 34882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 41660 - 41601
Alignment:
Q  15 taggcataccttgtgcttggatattgttgtgtggtgtgttatataatttcattttgattt 74  Q
    |||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  41660 taggcacaccttgtgcttggatattactgtttggtgtgttatataatttcattttgattt 41601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 39462 - 39509
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  39462 agaataatccctacatttcaataaatgtttttaaaatccctacatttt 39509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 39900 - 39853
Alignment:
Q  133 agaataatccctacatttcattaaatgtttttaaaatcctcacatttt 180  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  39900 agaatagtccctacatttcaataaatgtttttaaaatccttacatttt 39853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 77
Target Start/End: Original strand, 72348 - 72379
Alignment:
Q  46 tggtgtgttatataatttcattttgatttctt 77  Q
    ||||||||||||||||||||||||||||||||    
T  72348 tggtgtgttatataatttcattttgatttctt 72379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 544 - 581
Alignment:
Q  144 tacatttcattaaatgtttttaaaatcctcacatttta 181  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  544 tacatttcattaaatgtttttaaaattttcacatttta 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University