View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20016_low_53 (Length: 259)

Name: NF20016_low_53
Description: NF20016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20016_low_53
NF20016_low_53
[»] chr6 (29 HSPs)
chr6 (1-243)||(4563526-4563768)
chr6 (1-171)||(4592118-4592288)
chr6 (2-58)||(4480693-4480749)
chr6 (2-58)||(4492955-4493011)
chr6 (1-61)||(4560503-4560563)
chr6 (116-243)||(4613888-4614016)
chr6 (2-61)||(4557122-4557181)
chr6 (2-60)||(4570970-4571028)
chr6 (197-243)||(4592070-4592116)
chr6 (1-61)||(4585633-4585693)
chr6 (7-58)||(4515202-4515253)
chr6 (2-61)||(4606967-4607026)
chr6 (2-55)||(3171744-3171797)
chr6 (2-58)||(4505857-4505913)
chr6 (1-61)||(4574305-4574365)
chr6 (1-61)||(4613793-4613853)
chr6 (2-52)||(4504473-4504523)
chr6 (2-55)||(4299816-4299869)
chr6 (1-61)||(4598168-4598228)
chr6 (2-58)||(4601789-4601845)
chr6 (2-58)||(4617022-4617078)
chr6 (5-75)||(4579414-4579485)
chr6 (2-55)||(4267242-4267295)
chr6 (2-54)||(4392102-4392154)
chr6 (7-58)||(4461123-4461174)
chr6 (6-52)||(4490435-4490481)
chr6 (2-55)||(4622145-4622198)
chr6 (2-58)||(4516321-4516377)
chr6 (7-39)||(4568072-4568104)
[»] chr8 (3 HSPs)
chr8 (2-61)||(16686343-16686402)
chr8 (2-58)||(1674226-1674282)
chr8 (1-61)||(20863918-20863978)
[»] chr5 (2 HSPs)
chr5 (2-58)||(28000175-28000231)
chr5 (2-55)||(24103002-24103055)
[»] scaffold0477 (1 HSPs)
scaffold0477 (5-55)||(4765-4815)
[»] chr7 (1 HSPs)
chr7 (2-52)||(3086426-3086476)
[»] scaffold0288 (1 HSPs)
scaffold0288 (6-55)||(3799-3848)
[»] chr3 (1 HSPs)
chr3 (2-58)||(1281114-1281170)


Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 4563768 - 4563526
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaatttaagtaacttttttatgcaattcagttcaacgataag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4563768 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaatttaagtaacttttttatgcaattcagttcaacgataat 4563669  T
Q  101 tcattgatcttcccctattgaatttaagttctgatgtaagtgaagtcatcttcagcaagagttcctgaacttaaatagtgattcttgctaattttaaatg 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4563668 taattgatcttcccctattgaatttaagttctgatgtaagtgaagtcatcttcagcaagagttcctgaacttaaatagtgattcttgctaattttaagtg 4563569  T
Q  201 ttttgaatatatgcatattggataattatatggcatgtatatt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4563568 ttttgaatatatgcatattggataattatatggcatgtatatt 4563526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4592288 - 4592118
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa-tttaagtaacttttttatgcaattcagttcaacgataa 99  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||  ||||||||| ||||    
T  4592288 aggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagtaa-ttttttatgcaaagcagttcaacaataa 4592190  T
Q  100 gtcattgatcttcccctattgaatttaagttctgatgtaagtgaagtcatcttcagcaagagttcctgaact 171  Q
     | |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||    
T  4592189 ttgattgatcttcccctattgaatttaagtgatgatgtaagtgaactcatcttcagcaagagttcctaaact 4592118  T

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Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4480749 - 4480693
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  4480749 ggttgttcatacatgaacttggacaaagtgattaaggaggtcttgcttaaacaaaat 4480693  T

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Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4493011 - 4492955
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  4493011 ggttgttcatacatgaacttggacaaagtgatcaaggatgtcttgcttaaacaaaat 4492955  T

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Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4560563 - 4560503
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  4560563 aggttgttcatacatgaacttggagaaagtgattaaggaggtgttgcttaaacaaaatcaa 4560503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 4613888 - 4614016
Alignment:
Q  116 tattgaatttaagttctgatgtaagtgaagtcatcttcagcaagagttcctgaacttaaa-tagtgattcttgctaattttaaatgttttgaatatatgc 214  Q
    ||||||||||||||  |||||||| |||| | |||||||||||||| |  | |||||||| ||  |||||||||| || || |||| |||||||||||||    
T  4613888 tattgaatttaagtgatgatgtaaatgaactgatcttcagcaagagatggtaaacttaaaataacgattcttgcttatcttgaatggtttgaatatatgc 4613987  T
Q  215 atattggataattatatggcatgtatatt 243  Q
    | ||||||||||||||| ||| |||||||    
T  4613988 acattggataattatatagcaggtatatt 4614016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 4557181 - 4557122
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  4557181 ggttgttcatacatgaatttggaaaaagtgattaaggaggttttgcttaaacaaaatcaa 4557122  T

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Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 4571028 - 4570970
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatca 60  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  4571028 ggttgttcatacatgaacttggaaaaagtgattaaggaggttttgcttaaataaaatca 4570970  T

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Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 4592116 - 4592070
Alignment:
Q  197 aatgttttgaatatatgcatattggataattatatggcatgtatatt 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4592116 aatgttttgaatatatgcatattggataattatatggcatgtatatt 4592070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4585693 - 4585633
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||||||    
T  4585693 aggttgttcatacataaacttggaaaaagtgattaaggaggttttgcttaaataaaatcaa 4585633  T

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Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 4515202 - 4515253
Alignment:
Q  7 ttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  4515202 ttcatacttgaacttggacaaagtgatcaaggaggtgttgcttaaacaaaat 4515253  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 4606967 - 4607026
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    |||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  4606967 ggtttttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaaaatcaa 4607026  T

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Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 3171797 - 3171744
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 55  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  3171797 ggttgttcatacatgaacttggataaagtgattaaggaggtcttgcttaaacaa 3171744  T

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Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4505913 - 4505857
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  4505913 ggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaaacaaaat 4505857  T

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Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4574365 - 4574305
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    ||||||||||||||  |||||||| |||||||| |||||||| ||||||||||||||||||    
T  4574365 aggttgttcatacacaaacttggagaaagtgattaaggaggtgttgcttaaacaaaatcaa 4574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4613793 - 4613853
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    |||||||||||| ||||||||||||||||||||||| |||||  |||| ||||||||||||    
T  4613793 aggttgttcatatatgaacttggacaaagtgatcaatgaggtgctgctgaaacaaaatcaa 4613853  T

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Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 4504473 - 4504523
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaa 52  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||    
T  4504473 ggttgttcatacatgaacttggacaaagtgattaaggacgtcttgcttaaa 4504523  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 4299816 - 4299869
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 55  Q
    |||||||| |||||||||||||||||||| || ||||||||| |||||||||||    
T  4299816 ggttgttcgtacatgaacttggacaaagttattaaggaggttctgcttaaacaa 4299869  T

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Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4598228 - 4598168
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    ||||||||||||||||||||| || |||||||| |||||||| || |||||||| ||||||    
T  4598228 aggttgttcatacatgaacttagagaaagtgattaaggaggtgtttcttaaacagaatcaa 4598168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4601845 - 4601789
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    ||||||||||||| |||| |||||||||| || |||||||| |||||||||||||||    
T  4601845 ggttgttcatacaagaacctggacaaagttattaaggaggtgttgcttaaacaaaat 4601789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4617078 - 4617022
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    ||||||||||||||||||||| ||||||| || ||||| || |||||||||||||||    
T  4617078 ggttgttcatacatgaacttgaacaaagttattaaggatgtgttgcttaaacaaaat 4617022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 4579485 - 4579414
Alignment:
Q  5 tgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatc-aatttaagtaactttt 75  Q
    |||||||||||||||||||| |||||||| |||||||| || || |||||||||| || |||||| ||||||    
T  4579485 tgttcatacatgaacttggagaaagtgattaaggaggtgttactcaaacaaaatcgaacttaagtgactttt 4579414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 4267242 - 4267295
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 55  Q
    |||| |||||||||||||||||||||||| || ||||||||  |||||||||||    
T  4267242 ggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 4267295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 4392102 - 4392154
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaaca 54  Q
    |||| ||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  4392102 ggttcttcattcatgaacttggacaaactgattaaggaggtcttgcttaaaca 4392154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 4461174 - 4461123
Alignment:
Q  7 ttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||| ||||||||||||||| || ||||| || |||||||||||||||    
T  4461174 ttcatacaagaacttggacaaagtcattaaggatgtcttgcttaaacaaaat 4461123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 4490435 - 4490481
Alignment:
Q  6 gttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaa 52  Q
    |||||||||||||||||||||||||||| ||||| ||  ||||||||    
T  4490435 gttcatacatgaacttggacaaagtgattaaggatgtcatgcttaaa 4490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 4622198 - 4622145
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 55  Q
    |||||||||||||  |||||||||||||| || ||||||||  |||||||||||    
T  4622198 ggttgttcatacaacaacttggacaaagttattaaggaggtcatgcttaaacaa 4622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4516377 - 4516321
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||||||  |||||||||| |||||||| ||||||||  |||| |||||||||    
T  4516377 ggttgttcatatgtgaacttggaaaaagtgattaaggaggtgctgctcaaacaaaat 4516321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 4568104 - 4568072
Alignment:
Q  7 ttcatacatgaacttggacaaagtgatcaagga 39  Q
    ||||||||||||||||||||||||||| |||||    
T  4568104 ttcatacatgaacttggacaaagtgattaagga 4568072  T

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Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 16686343 - 16686402
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  16686343 ggttgttcatacatgaacttggaaaaagtgattatggaggttttgcttaaacaaaatcaa 16686402  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1674282 - 1674226
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||    
T  1674282 ggttgttcatacatgaacttggacaaagtgattaaggaagtgttgcttaaacaaaat 1674226  T

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Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20863918 - 20863978
Alignment:
Q  1 aggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 61  Q
    |||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  20863918 aggtggttcatatatgaacttggacaaagtgattaaggaggtgttgcttaaacaaaatcaa 20863978  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 28000175 - 28000231
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||||||||||||||||||||||||||| ||||| || ||| |||||||||||    
T  28000175 ggttgttcatacatgaacttggacaaagtgattaaggaagtgttgtttaaacaaaat 28000231  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24103055 - 24103002
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 55  Q
    |||| |||||||||||||||||||||||| || ||||||||  |||||||||||    
T  24103055 ggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 24103002  T

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Target: scaffold0477 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 4765 - 4815
Alignment:
Q  5 tgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 55  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  4765 tgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa 4815  T

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Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 3086476 - 3086426
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaa 52  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  3086476 ggttgttcatacatgaacttggacaaagttattaaggaggtcttgcttaaa 3086426  T

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Target: scaffold0288 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 3799 - 3848
Alignment:
Q  6 gttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 55  Q
    |||||||||||||| |||||||||| || |||||||||||||||||||||    
T  3799 gttcatacatgaacctggacaaagttattaaggaggttttgcttaaacaa 3848  T

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Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1281170 - 1281114
Alignment:
Q  2 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 58  Q
    |||||||||||||||||||| ||||||||||| |||||  | |||||||||||||||    
T  1281170 ggttgttcatacatgaacttcgacaaagtgattaaggaaatgttgcttaaacaaaat 1281114  T

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