View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20016_low_8 (Length: 498)

Name: NF20016_low_8
Description: NF20016
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20016_low_8
NF20016_low_8
[»] chr1 (41 HSPs)
chr1 (185-474)||(7421649-7421938)
chr1 (9-56)||(7421459-7421506)
chr1 (214-299)||(23368756-23368841)
chr1 (220-295)||(9639813-9639887)
chr1 (223-285)||(24253676-24253738)
chr1 (214-290)||(24874970-24875045)
chr1 (214-285)||(24134648-24134719)
chr1 (214-289)||(36666572-36666646)
chr1 (241-287)||(22779221-22779267)
chr1 (240-293)||(27160487-27160540)
chr1 (220-285)||(34702343-34702408)
chr1 (225-286)||(35195646-35195707)
chr1 (220-285)||(43109268-43109333)
chr1 (214-283)||(50065012-50065081)
chr1 (214-278)||(8310661-8310725)
chr1 (220-288)||(16997261-16997328)
chr1 (225-285)||(27054690-27054750)
chr1 (242-290)||(38491040-38491088)
chr1 (237-285)||(39304250-39304298)
chr1 (214-289)||(19564149-19564222)
chr1 (214-289)||(21265656-21265730)
chr1 (214-285)||(31124634-31124704)
chr1 (214-289)||(33207205-33207279)
chr1 (242-281)||(39326666-39326705)
chr1 (214-288)||(11333665-11333738)
chr1 (214-288)||(11491686-11491759)
chr1 (227-289)||(38448869-38448930)
chr1 (214-288)||(43021618-43021691)
chr1 (242-279)||(7006598-7006635)
chr1 (225-290)||(17283947-17284011)
chr1 (220-289)||(22563386-22563454)
chr1 (220-300)||(47763415-47763495)
chr1 (227-284)||(52164408-52164465)
chr1 (217-289)||(4482597-4482668)
chr1 (226-290)||(7438616-7438680)
chr1 (220-288)||(12662688-12662756)
chr1 (227-271)||(25031534-25031578)
chr1 (240-280)||(34940466-34940506)
chr1 (243-287)||(35473951-35473994)
chr1 (252-296)||(40513226-40513270)
chr1 (225-285)||(50011507-50011567)
[»] chr3 (29 HSPs)
chr3 (225-289)||(166784-166848)
chr3 (214-285)||(25165440-25165511)
chr3 (225-281)||(1102731-1102787)
chr3 (222-285)||(32421348-32421411)
chr3 (214-285)||(45431627-45431698)
chr3 (225-279)||(37756448-37756502)
chr3 (214-290)||(29373445-29373520)
chr3 (225-285)||(33528240-33528300)
chr3 (225-285)||(46247260-46247320)
chr3 (245-285)||(54457153-54457193)
chr3 (243-286)||(12977256-12977299)
chr3 (214-289)||(24303390-24303464)
chr3 (220-291)||(39739268-39739339)
chr3 (240-278)||(28054779-28054817)
chr3 (240-278)||(28065204-28065242)
chr3 (220-286)||(32776214-32776279)
chr3 (225-291)||(47098730-47098795)
chr3 (225-286)||(38869226-38869287)
chr3 (226-287)||(41798987-41799047)
chr3 (230-287)||(48315030-48315086)
chr3 (225-285)||(2259157-2259217)
chr3 (227-287)||(8125641-8125700)
chr3 (226-294)||(11483604-11483672)
chr3 (243-299)||(23525140-23525195)
chr3 (253-289)||(27394504-27394540)
chr3 (225-285)||(30162657-30162717)
chr3 (217-289)||(45701344-45701415)
chr3 (253-285)||(50271730-50271762)
chr3 (225-289)||(53347297-53347360)
[»] chr2 (25 HSPs)
chr2 (214-289)||(24202146-24202221)
chr2 (220-289)||(20435777-20435846)
chr2 (223-289)||(20375589-20375655)
chr2 (245-293)||(9564530-9564578)
chr2 (223-290)||(31605494-31605560)
chr2 (225-289)||(44948596-44948659)
chr2 (214-289)||(1844817-1844891)
chr2 (214-289)||(20919610-20919684)
chr2 (225-288)||(24593374-24593436)
chr2 (225-292)||(32084838-32084905)
chr2 (214-289)||(33228929-33229003)
chr2 (243-297)||(9572720-9572774)
chr2 (223-289)||(12124542-12124607)
chr2 (223-289)||(12124681-12124746)
chr2 (241-290)||(7661421-7661469)
chr2 (220-265)||(13242733-13242778)
chr2 (225-290)||(15654870-15654934)
chr2 (220-289)||(34613979-34614047)
chr2 (240-289)||(35429624-35429672)
chr2 (243-300)||(40099402-40099458)
chr2 (220-289)||(40535451-40535519)
chr2 (225-257)||(3154028-3154060)
chr2 (225-289)||(8250308-8250371)
chr2 (220-292)||(32190004-32190075)
chr2 (253-289)||(38790144-38790180)
[»] chr5 (19 HSPs)
chr5 (227-293)||(12256524-12256590)
chr5 (227-289)||(3294079-3294141)
chr5 (223-287)||(9628115-9628179)
chr5 (214-285)||(31250147-31250218)
chr5 (214-285)||(38503281-38503352)
chr5 (214-285)||(43227866-43227937)
chr5 (220-286)||(18928723-18928788)
chr5 (227-285)||(31991798-31991856)
chr5 (214-289)||(1269163-1269237)
chr5 (214-285)||(17077361-17077432)
chr5 (214-284)||(19655968-19656037)
chr5 (243-289)||(27679495-27679540)
chr5 (240-285)||(16764455-16764500)
chr5 (220-289)||(17545174-17545242)
chr5 (240-289)||(39800052-39800100)
chr5 (225-285)||(12375447-12375507)
chr5 (214-262)||(20145560-20145608)
chr5 (225-286)||(34729469-34729532)
chr5 (217-289)||(36422494-36422566)
[»] chr7 (29 HSPs)
chr7 (220-289)||(46570001-46570070)
chr7 (240-292)||(25965739-25965791)
chr7 (214-286)||(44662487-44662559)
chr7 (225-288)||(9668850-9668912)
chr7 (226-294)||(8249696-8249764)
chr7 (225-289)||(14650507-14650570)
chr7 (217-289)||(27424839-27424910)
chr7 (214-290)||(27454006-27454082)
chr7 (226-285)||(8133831-8133890)
chr7 (225-288)||(29357798-29357860)
chr7 (214-285)||(40273821-40273892)
chr7 (214-299)||(23274810-23274894)
chr7 (220-292)||(23602267-23602339)
chr7 (225-289)||(47070316-47070379)
chr7 (214-289)||(9877263-9877337)
chr7 (214-289)||(23102554-23102628)
chr7 (214-285)||(48433734-48433805)
chr7 (217-291)||(24781028-24781101)
chr7 (214-290)||(36315998-36316073)
chr7 (215-285)||(42554634-42554704)
chr7 (220-286)||(46987086-46987151)
chr7 (220-289)||(15238889-15238957)
chr7 (220-297)||(20521027-20521103)
chr7 (225-285)||(15025156-15025216)
chr7 (225-289)||(19752975-19753038)
chr7 (243-295)||(26816683-26816734)
chr7 (243-299)||(29132068-29132124)
chr7 (240-292)||(45411629-45411680)
chr7 (226-286)||(46243290-46243350)
[»] chr8 (33 HSPs)
chr8 (214-285)||(22652683-22652754)
chr8 (241-287)||(40444703-40444749)
chr8 (241-289)||(31220340-31220388)
chr8 (214-285)||(41454851-41454922)
chr8 (214-283)||(8350438-8350507)
chr8 (216-257)||(31406788-31406829)
chr8 (250-290)||(11810565-11810605)
chr8 (225-289)||(13059184-13059247)
chr8 (225-285)||(13906661-13906721)
chr8 (227-283)||(19733106-19733162)
chr8 (214-286)||(19957345-19957417)
chr8 (226-290)||(39974840-39974903)
chr8 (225-285)||(41845464-41845524)
chr8 (225-285)||(44828468-44828528)
chr8 (214-289)||(481011-481085)
chr8 (391-474)||(45517864-45517947)
chr8 (227-289)||(19778062-19778123)
chr8 (223-293)||(38289268-38289338)
chr8 (220-289)||(5326172-5326240)
chr8 (226-283)||(8349519-8349576)
chr8 (240-285)||(10621425-10621470)
chr8 (214-287)||(15856502-15856574)
chr8 (391-464)||(22534625-22534698)
chr8 (220-289)||(23178893-23178961)
chr8 (222-287)||(27750902-27750966)
chr8 (225-285)||(1032570-1032630)
chr8 (214-290)||(3311435-3311511)
chr8 (235-287)||(11690985-11691036)
chr8 (240-288)||(18080936-18080984)
chr8 (243-287)||(23816789-23816832)
chr8 (217-289)||(24458317-24458388)
chr8 (225-289)||(26022247-26022310)
chr8 (225-289)||(42877034-42877097)
[»] chr4 (31 HSPs)
chr4 (225-288)||(13539874-13539936)
chr4 (214-285)||(38690666-38690737)
chr4 (214-286)||(29889802-29889874)
chr4 (225-289)||(55853115-55853178)
chr4 (214-284)||(11491243-11491313)
chr4 (214-295)||(27862855-27862936)
chr4 (240-288)||(35733371-35733419)
chr4 (220-292)||(45139883-45139954)
chr4 (213-289)||(49901482-49901557)
chr4 (214-289)||(8965094-8965168)
chr4 (220-291)||(50457716-50457786)
chr4 (214-285)||(50815707-50815778)
chr4 (214-289)||(51890797-51890871)
chr4 (221-287)||(7230279-7230344)
chr4 (215-285)||(29430497-29430567)
chr4 (240-290)||(39387473-39387523)
chr4 (214-292)||(43362192-43362270)
chr4 (225-259)||(45665038-45665072)
chr4 (225-290)||(624479-624543)
chr4 (225-290)||(16556446-16556511)
chr4 (236-285)||(41971345-41971394)
chr4 (220-285)||(51974747-51974812)
chr4 (240-289)||(54593810-54593859)
chr4 (220-289)||(55055916-55055984)
chr4 (243-300)||(56497627-56497683)
chr4 (240-288)||(3784913-3784960)
chr4 (390-462)||(3879175-3879247)
chr4 (225-289)||(7686269-7686332)
chr4 (225-285)||(13210199-13210259)
chr4 (214-285)||(40406984-40407056)
chr4 (225-289)||(45849047-45849110)
[»] chr6 (11 HSPs)
chr6 (226-289)||(5641726-5641788)
chr6 (214-285)||(6228284-6228355)
chr6 (225-285)||(15717048-15717108)
chr6 (214-289)||(2251838-2251912)
chr6 (252-286)||(3338368-3338402)
chr6 (221-294)||(4450254-4450326)
chr6 (225-294)||(32670061-32670129)
chr6 (226-290)||(4869706-4869769)
chr6 (225-289)||(20568292-20568355)
chr6 (220-300)||(32611556-32611635)
chr6 (217-289)||(32813649-32813720)
[»] scaffold0018 (1 HSPs)
scaffold0018 (225-285)||(121834-121894)
[»] scaffold0088 (1 HSPs)
scaffold0088 (214-289)||(10822-10896)
[»] scaffold0001 (1 HSPs)
scaffold0001 (214-285)||(419712-419783)
[»] scaffold0608 (1 HSPs)
scaffold0608 (217-289)||(8966-9037)
[»] scaffold0562 (1 HSPs)
scaffold0562 (390-462)||(10011-10083)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 185 - 474
Target Start/End: Original strand, 7421649 - 7421938
Alignment:
Q  185 gtcaaatagtttagcgcctagagaaattcggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctc 284  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||  | ||||     
T  7421649 gtcaaatagcttagcgcctagagaaattcgaggtatccgaggttcgaacaccggtccctgcataaattatgcatgatcccttaccatgtgaagtgagcta 7421748  T
Q  285 acgggaacataaaaaactaaatttaattgtgttaaatatacttttgaactctatatatatttcaactttttcattttagtctttctaaaagtttctttta 384  Q
    |  || | || |||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7421749 agcgggatattaaaaactaaatttaattgtgttaaatatgcatttgaactctaaatatatttcaactttttcattttagtctttctaaaagtttctttta 7421848  T
Q  385 gtccagcacataagcaaaaatgagccaaattggtaagaaagtgggtggatagactttttttaaaaattaaaaaatttgcaaggatgtttt 474  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7421849 gtccagcacataagcaaaaatgagccaaatcgataagaaagtgggtggatagacttttttaaaaaattaaaaaatttgcaaggatgtttt 7421938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7421459 - 7421506
Alignment:
Q  9 gaagaatatttgtcctatttttaatatttaccaatgagagctattttt 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7421459 gaagaatatttgtcctatttttaatatttaccaatgagagctattttt 7421506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 23368756 - 23368841
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaa 299  Q
    ||||| |||| |||||||||| ||||||||||| ||| | ||||||||| |||| ||| ||||||||||||| ||||||| |||||    
T  23368756 ggggtgtccggggttcgaacatcggtccctgcacaaaatgtgcattatcccttatcaaatgagctaagctcatgggaacacaaaaa 23368841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 9639813 - 9639887
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacata 295  Q
    |||||||||||||| |||| || |||||| |||||||||| || ||||||||||||| |||||||||||| |||||    
T  9639813 tccgaggttcgaactccggaccttgcatatattatgcattgtc-cttaccaagtgagttaagctcacggggacata 9639887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 24253676 - 24253738
Alignment:
Q  223 gaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||||  |||  ||||||||||||||||||||||| |||| |||||||||||||||||    
T  24253676 gaggttcgaatcccgacccctgcataaattatgcattatcccttatcaagtgagctaagctca 24253738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 24875045 - 24874970
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||| |||||||||||||| || | || ||||||||||||||| |||| | |||||| ||||||||||||||||||    
T  24875045 ggggtgtccgaggttcgaacccctgcccatgcataaattatgcaatatc-cctaccaactgagctaagctcacggga 24874970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 24134648 - 24134719
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  24134648 ggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 24134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 36666572 - 36666646
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||| | || | |||||| |||||||||||||||||    
T  36666572 ggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtc-cctaccaactgagctaagctcacggg 36666646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 22779267 - 22779221
Alignment:
Q  241 cctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  22779267 cctgtataaaatatgcattatcccttaccaagtgagctaagctcacg 22779221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 27160540 - 27160487
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaaca 293  Q
    ||||||||| ||||||||||||| ||||| || |||||||| ||||||||||||    
T  27160540 ccctgcatatattatgcattatcccttactaaatgagctaaactcacgggaaca 27160487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 34702343 - 34702408
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  34702343 tccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 34702408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 35195646 - 35195707
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    ||||||||| | |||||||||||| | ||||||||||| ||||  |||||||||||||||||    
T  35195646 ggttcgaaccctggtccctgcatataatatgcattatcccttattaagtgagctaagctcac 35195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 43109268 - 43109333
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  43109268 tccggggttcgaaccccggcccctgcacatattttgcattatcccttaccaaatgagctaagctca 43109333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 50065081 - 50065012
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagct 283  Q
    ||||| |||||| ||||||| |||||||||||| | ||| ||||||||| |||| ||| |||||||||||    
T  50065081 ggggtgtccgagattcgaaccccggtccctgcacatattgtgcattatcccttatcaaatgagctaagct 50065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 8310725 - 8310661
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagct 278  Q
    |||||||||| ||||||||| | |  ||||||||| || || |||||||||||||||||||||||    
T  8310725 ggggtatccggggttcgaaccctgacccctgcatatataatacattatctcttaccaagtgagct 8310661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 16997261 - 16997328
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    |||| |||||||||  ||| ||||||||||| |||||||| |||| |||||| ||||||||||||||||    
T  16997261 tccggggttcgaacctcggcccctgcataaaatatgcattgtctc-taccaactgagctaagctcacgg 16997328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 27054750 - 27054690
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  27054750 ggttcgaaccccggcccctgcagatattgtgcattatcccttaccaaatgagctaagctca 27054690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 38491088 - 38491040
Alignment:
Q  242 ctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    |||||||||||||||||| ||| ||| |||||||| |||||||||||||    
T  38491088 ctgcataaattatgcattgtctgttatcaagtgagttaagctcacggga 38491040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 39304250 - 39304298
Alignment:
Q  237 ggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||||||    
T  39304250 ggtccctgcacatattatgcattatcccttaccaaatgagctaagctca 39304298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 19564149 - 19564222
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||||||||||||| |||| |||||||||||||||||| | || ||| |||| |||||||| ||||||||    
T  19564149 ggggtgtccgaggttcgaaccccgg-ccctgcataaattatgcaatgtc-cttgccaactgagctaaactcacggg 19564222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 21265730 - 21265656
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  21265730 ggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 21265656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 31124634 - 31124704
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||||  |||||||| |||| |||||||||||||||||| | || ||| |||| |||||||||||||    
T  31124634 ggggtatccggagttcgaaccccggcccctgcataaattatgcaatgtc-cttgccaactgagctaagctca 31124704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 33207279 - 33207205
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  33207279 ggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 33207205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 39326666 - 39326705
Alignment:
Q  242 ctgcataaattatgcattatctcttaccaagtgagctaag 281  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  39326666 ctgcataaattatgcattatttcttaccaagtgagttaag 39326705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 11333738 - 11333665
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||| | || | |||||| ||||||||| ||||||    
T  11333738 ggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtc-cctaccaactgagctaagttcacgg 11333665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 11491759 - 11491686
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||| | || | |||||| ||||||||| ||||||    
T  11491759 ggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtc-cctaccaactgagctaagttcacgg 11491686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 38448869 - 38448930
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| |||| || |||||| |||||||||| || |||||||| |||||||||||||||||    
T  38448869 ttcgaaccccggaccttgcatatattatgcattgtc-cttaccaactgagctaagctcacggg 38448930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 43021618 - 43021691
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||| |||||||||||||| |||  ||||||||||| |||||||| || | |||||| | ||||||||||||||    
T  43021618 ggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtc-cctaccaactaagctaagctcacgg 43021691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 7006635 - 7006598
Alignment:
Q  242 ctgcataaattatgcattatctcttaccaagtgagcta 279  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  7006635 ctgcatataatatgcattatctcttaccaagtgagcta 7006598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 17284011 - 17283947
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||||| | || || |||||| |||||||||| || |||||||| ||||||||||||||||||    
T  17284011 ggttcgaaccctggaccttgcatatattatgcattgtc-cttaccaactgagctaagctcacggga 17283947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 22563454 - 22563386
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  22563454 tccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 22563386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 47763415 - 47763495
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcata-aattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaaa 300  Q
    |||||||||||||| |||| ||||||||| ||| ||||||| || | | |||| ||||||| ||||||||||||| ||||||    
T  47763415 tccgaggttcgaactccggcccctgcatataataatgcattgtc-cctgccaactgagctatgctcacgggaacaaaaaaaa 47763495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 52164408 - 52164465
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctc 284  Q
    ||||||| ||| |||||||| | ||| |||||||||||||||||| |||| |||||||    
T  52164408 ttcgaaccccgatccctgcacatattgtgcattatctcttaccaaatgagttaagctc 52164465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 4482597 - 4482668
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| ||||||||| ||||  |||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  4482597 gtatccggggttcgaactccggctcctgcatataatatgcaatatccct-accaactgagctaagctcacggg 4482668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 7438680 - 7438616
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    |||||||| |||  |||| || ||||| ||||||||| |||||||| ||||||||||||| ||||    
T  7438680 gttcgaaccccgacccctacacaaattgtgcattatcccttaccaaatgagctaagctcatggga 7438616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 12662756 - 12662688
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    |||||| ||||||| |||| ||||||||| | |||||| |||| ||||  || ||||||||||||||||    
T  12662756 tccgagtttcgaactccggcccctgcatataatatgcaatatcccttattaactgagctaagctcacgg 12662688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 25031534 - 25031578
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaa 271  Q
    ||||||| |||| ||||||| | ||||||||||||||||||||||    
T  25031534 ttcgaaccccggcccctgcacatattatgcattatctcttaccaa 25031578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 34940466 - 34940506
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaa 280  Q
    ||||||||| | ||||||||||| |||||||||||||||||    
T  34940466 ccctgcatataatatgcattatcccttaccaagtgagctaa 34940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 35473994 - 35473951
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||    
T  35473994 tgcatatattatgcattatc-cttaccaattgagctaagctcacg 35473951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 40513270 - 40513226
Alignment:
Q  252 tatgcattatctcttaccaagtgagctaagctcacgggaacataa 296  Q
    ||||||||||| |||||||| |||||||||||||| || ||||||    
T  40513270 tatgcattatcccttaccaaatgagctaagctcacagggacataa 40513226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 50011567 - 50011507
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| || | ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  50011567 ggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 50011507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 166848 - 166784
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  166848 ggttcgaaccccggcccctgcataaattatgcattatcccttaccaagtgagctaagctcacggg 166784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 25165511 - 25165440
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||||||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  25165511 ggggtgtccggggttcgaaccccggtccctgcacatattgtgcattatcccttaccaaatgagctaagctca 25165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 1102731 - 1102787
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaag 281  Q
    ||||||||| |||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  1102731 ggttcgaactccgtcccctgcataaattatgcattatcccttaccaggtgagctaag 1102787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 32421411 - 32421348
Alignment:
Q  222 cgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||||||||||| |||  ||||||||| ||||||||||||| |||||||  |||||||||||||    
T  32421411 cgaggttcgaaccccgacccctgcatatattatgcattatcccttaccagatgagctaagctca 32421348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 45431698 - 45431627
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| | |  ||||||||||| || |||||||| ||||||||||||||||||||||    
T  45431698 ggggtgtccggggttcgaaccctgacccctgcataaaatacgcattatcccttaccaagtgagctaagctca 45431627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 37756448 - 37756502
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagcta 279  Q
    ||||||||| || | ||||||||||||||||||||||| |||| |||||||||||    
T  37756448 ggttcgaaccccagcccctgcataaattatgcattatcccttatcaagtgagcta 37756502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 29373445 - 29373520
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||| || ||||||||||| |||| ||||||||| | |||||| |||| |||||||| |||| |||||||||||||    
T  29373445 ggggtgtctgaggttcgaaccccggcccctgcatataatatgcaatatc-cttaccaactgagttaagctcacggga 29373520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 33528240 - 33528300
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| || | ||||||| ||||| ||||||||| |||||||| |||||||||||||    
T  33528240 ggttcgaaccccagcccctgcacaaattgtgcattatcccttaccaaatgagctaagctca 33528300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 46247320 - 46247260
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| || | ||||||| ||||| ||||||||| |||||||| |||||||||||||    
T  46247320 ggttcgaaccccagcccctgcacaaattgtgcattatcccttaccaaatgagctaagctca 46247260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 54457193 - 54457153
Alignment:
Q  245 cataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  54457193 cataaattatgcattatctcttatcaagtgagttaagctca 54457153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 12977299 - 12977256
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    |||||||||||| ||||||| ||| |||||||||||||||||||    
T  12977299 tgcataaattatacattatcccttgccaagtgagctaagctcac 12977256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 24303464 - 24303390
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||| | || | | |||| |||||||||||||||||    
T  24303464 ggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtc-cctgccaactgagctaagctcacggg 24303390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 39739339 - 39739268
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaa 291  Q
    |||| ||||||||| ||  |||||||| | ||| ||||||||| |||||||| ||||||||||||| |||||    
T  39739339 tccggggttcgaaccccaatccctgcacatattgtgcattatcccttaccaaatgagctaagctcatgggaa 39739268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 28054779 - 28054817
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagct 278  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  28054779 ccctgcataaattatgcaatatcccttaccaagtgagct 28054817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 28065204 - 28065242
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagct 278  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  28065204 ccctgcataaattatgcaatatcccttaccaagtgagct 28065242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 32776279 - 32776214
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    |||| ||||||||| |||| |||||||||||||||||| | || | |||||| ||||||||||||||    
T  32776279 tccggggttcgaaccccggcccctgcataaattatgcaatgtc-cctaccaactgagctaagctcac 32776214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 47098795 - 47098730
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaa 291  Q
    ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||||    
T  47098795 ggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacgggaa 47098730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 38869226 - 38869287
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    ||||||||| |||  ||||||||  ||||||||||||| ||||||||||||| |||| ||||    
T  38869226 ggttcgaaccccgacccctgcatgtattatgcattatcccttaccaagtgagttaagttcac 38869287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 41798987 - 41799047
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||||||| ||  ||| ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  41798987 gttcgaacccctatccatgcataaattatgcattatct-ttaccaattgagataagctcacg 41799047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 48315030 - 48315086
Alignment:
Q  230 gaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||| |||| || |||||| ||||||||||||| |||||||| |||||||||||||||    
T  48315030 gaaccccggaccttgcatatattatgcattatc-cttaccaactgagctaagctcacg 48315086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 2259217 - 2259157
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||| |||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  2259217 ggtttgaactccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 2259157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 8125700 - 8125641
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    ||||||| |||||||||||||| | |||||| |||| | |||||| |||||||||||||||    
T  8125700 ttcgaaccccggtccctgcatataatatgcaatatc-cctaccaactgagctaagctcacg 8125641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 11483672 - 11483604
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacat 294  Q
    |||||||| | || ||||||| | ||| ||||||||| |||||||| ||||||||||||| ||| ||||    
T  11483672 gttcgaaccctggcccctgcacatattttgcattatcccttaccaaatgagctaagctcatggggacat 11483604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 23525140 - 23525195
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaa 299  Q
    |||||| |||||||||| || ||| |||| |||| ||||||||||||||||||||||    
T  23525140 tgcatatattatgcattgtc-cttgccaactgagttaagctcacgggaacataaaaa 23525195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 27394540 - 27394504
Alignment:
Q  253 atgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  27394540 atgcattatcccttaccaagtgagcttagctcacggg 27394504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 30162717 - 30162657
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||| || |||| | ||| ||||||||| |||||||| |||||||||||||    
T  30162717 ggttcgaaccccggcccttgcacatattgtgcattatcccttaccaaatgagctaagctca 30162657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 45701415 - 45701344
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| ||||||||| ||||  |||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  45701415 gtatccggggttcgaaccccggctcctgcatataatatgcaatatccct-accaactgagctaagctcacggg 45701344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 50271762 - 50271730
Alignment:
Q  253 atgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||||||||||||| |||||||||||||    
T  50271762 atgcattatctcttaccaaatgagctaagctca 50271730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 53347297 - 53347360
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| || ||||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  53347297 ggttcgaaccccagtccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 53347360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 24202221 - 24202146
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  24202221 ggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttaccaagtgagctaagctcacggg 24202146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 20435846 - 20435777
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||||||||| |||| || |||||||| |||||| |||| ||||||||||||||||||||||||||    
T  20435846 tccgaggttcgaaccccgggccttgcataaaatatgcaatatcccttaccaagtgagctaagctcacggg 20435777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 20375655 - 20375589
Alignment:
Q  223 gaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||||| |||| ||||||||||| || ||| |||| ||||||||||||||||||||||||||    
T  20375655 gaggttcgaaccccggaccctgcataaaataggcaatatcccttaccaagtgagctaagctcacggg 20375589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 9564578 - 9564530
Alignment:
Q  245 cataaattatgcattatctcttaccaagtgagctaagctcacgggaaca 293  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  9564578 catatattatacattatctcttaccaagcgagctaagctcacgggaaca 9564530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 31605560 - 31605494
Alignment:
Q  223 gaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||||||| ||| |||||||||| || |||||||||| ||||| ||||||| |||||||||||||    
T  31605560 gaggttcgaaccccgttccctgcatatat-atgcattatcccttactaagtgagttaagctcacggga 31605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 44948659 - 44948596
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||||||||||||| | |||||| |||| | |||||| |||||||||||||||||    
T  44948659 ggttcgaaccccggtccctgcatataatatgcaatatc-cctaccaactgagctaagctcacggg 44948596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 1844891 - 1844817
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||||||||||||| |||| ||||||||| | |||||| |||| | |||||| ||||||||||| |||||    
T  1844891 ggggtgtccgaggttcgaaccccggcccctgcatataatatgcaatatc-cctaccaactgagctaagcttacggg 1844817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 20919684 - 20919610
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||| |||||||||||||| | || | |||||| |||||||||||||||||    
T  20919684 ggggtgtccggggttcgaaccccggccccagcataaattatgcaatgtc-cctaccaactgagctaagctcacggg 20919610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 24593436 - 24593374
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||||||| |||| || |||||| |||||||||| || |||||||| ||||||||||||||||    
T  24593436 ggttcgaaccccggaccttgcatatattatgcattgtc-cttaccaactgagctaagctcacgg 24593374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 32084905 - 32084838
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaac 292  Q
    ||||||||| |||| |||| |||| | |||||||| || |||||||| ||||||||||||| ||||||    
T  32084905 ggttcgaaccccggcccctacatataatatgcattgtcccttaccaaatgagctaagctcatgggaac 32084838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 33228929 - 33229003
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  33228929 ggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 33229003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 9572774 - 9572720
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaa 297  Q
    |||||| ||||| |||||||||||| ||||||||||||| | ||||| |||||||    
T  9572774 tgcatatattatacattatctcttatcaagtgagctaagtttacggggacataaa 9572720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 12124607 - 12124542
Alignment:
Q  223 gaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||||| |||| || |||||| |||||||||| || |||||||| |||||||| ||||||||    
T  12124607 gaggttcgaaccccggaccttgcatatattatgcattgtc-cttaccaactgagctaaactcacggg 12124542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 12124746 - 12124681
Alignment:
Q  223 gaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||||| |||| || |||||| |||||||||| || |||||||| ||||||||||| |||||    
T  12124746 gaggttcgaactccggaccttgcatatattatgcattgtc-cttaccaactgagctaagctgacggg 12124681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 7661421 - 7661469
Alignment:
Q  241 cctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||||||||||||| | ||||| | ||||||||||||||||||||||    
T  7661421 cctgcataaattatgcaatgtctct-atcaagtgagctaagctcacggga 7661469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 13242733 - 13242778
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctct 265  Q
    |||||||||||||| |||  |||||||||||||||||| |||||||    
T  13242733 tccgaggttcgaaccccgacccctgcataaattatgcaatatctct 13242778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 15654870 - 15654934
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||||| || | || ||||||  |||||||||||| |||||||| ||||||||||||||||||    
T  15654870 ggttcgaaccccagaccttgcatattttatgcattatc-cttaccaactgagctaagctcacggga 15654934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 34614047 - 34613979
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  34614047 tccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 34613979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 35429624 - 35429672
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  35429624 ccctgcataaattatgcaatgtctct-accaactgagctaagctcacggg 35429672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 40099402 - 40099458
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaaa 300  Q
    |||||| |||||||||| || |||||||| ||||||||||||| ||| ||||||||||    
T  40099402 tgcatatattatgcattgtc-cttaccaactgagctaagctcatggggacataaaaaa 40099458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 40535451 - 40535519
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| ||||||||| |||| ||||||||| | |||||| |||| | |||||| |||||||||||||||||    
T  40535451 tccggggttcgaaccccggcccctgcatataatatgcaatatc-cgtaccaactgagctaagctcacggg 40535519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 3154060 - 3154028
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgca 257  Q
    ||||||||| |||||||||||||||||||||||    
T  3154060 ggttcgaaccccggtccctgcataaattatgca 3154028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 8250308 - 8250371
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  8250308 ggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 8250371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 32190004 - 32190075
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaac 292  Q
    |||| ||||||||| |||| |||||||||||||||||| | || | |||||| ||| |||||||| |||||||    
T  32190004 tccggggttcgaaccccggcccctgcataaattatgcaatgtc-cctaccaactgaactaagctcgcgggaac 32190075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 38790144 - 38790180
Alignment:
Q  253 atgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||||| |||||||| |||||||||||||||||    
T  38790144 atgcattatcccttaccaaatgagctaagctcacggg 38790180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 12256524 - 12256590
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaaca 293  Q
    ||||||| |||  ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  12256524 ttcgaaccccgacccctgcatatattatgcattatctcataccaagtgagctaagctcacgggaaca 12256590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 3294141 - 3294079
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| |||| ||||||||||||||||||||||| |||| ||||| || ||||||||||||    
T  3294141 ttcgaaccccggcccctgcataaattatgcattatcccttaacaagtaagttaagctcacggg 3294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 9628179 - 9628115
Alignment:
Q  223 gaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    ||||||||||| |||   |||||||| |||||||||||||||||||||| |||| ||||||||||    
T  9628179 gaggttcgaaccccgaatcctgcatatattatgcattatctcttaccaaatgagttaagctcacg 9628115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 31250218 - 31250147
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  31250218 ggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 31250147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 38503281 - 38503352
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  38503281 ggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 38503352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 43227937 - 43227866
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  43227937 ggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 43227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 18928788 - 18928723
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    |||| |||||||||||||  |||||||||||||||||| |||| | |||||| ||||||||||||||    
T  18928788 tccgtggttcgaacaccgacccctgcataaattatgcaatatc-cctaccaactgagctaagctcac 18928723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 31991798 - 31991856
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||| |||  ||||||||| || |||||||||| ||||||||||||||||||||||    
T  31991798 ttcgaaccccgacccctgcatatataatgcattatcccttaccaagtgagctaagctca 31991856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 1269163 - 1269237
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| ||||||||||||||   || ||||||||| | |||||| |||||| |||||| |||||||||||||||||    
T  1269163 ggggtgtccgaggttcgaactttggcccctgcatataatatgcaatatctc-taccaattgagctaagctcacggg 1269237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 17077432 - 17077361
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||  |||  ||||||| ||||| ||||||||| |||||||| |||||||||||||    
T  17077432 ggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatcccttaccaaatgagctaagctca 17077361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 19655968 - 19656037
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctc 284  Q
    |||||||||| |||||||||||||| || |||||||||||| || | || ||| |||| ||||||||||||    
T  19655968 ggggtatccggggttcgaacaccggcccgtgcataaattatacaatgtc-cttgccaactgagctaagctc 19656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 27679540 - 27679495
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  27679540 tgcatatattatgcattatct-ttaccaactgagctaagctcacggg 27679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 16764500 - 16764455
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||||||||||||||||| || | ||||||||||||    
T  16764500 ccctgcatatattatgcattatctcttatcatgggagctaagctca 16764455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 17545174 - 17545242
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  17545174 tccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 17545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 39800052 - 39800100
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||||||||||||||| || | |||||| |||||||||||||||||    
T  39800052 ccctgcataaattatgcattgtc-cctaccaactgagctaagctcacggg 39800100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 12375447 - 12375507
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||| ||||||| | ||| |||||||||  ||||||| |||||||||||||    
T  12375447 ggttcgaaccccggcccctgcacatattgtgcattatccattaccaaatgagctaagctca 12375507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 20145560 - 20145608
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatc 262  Q
    ||||| |||||||||||||| |||| || ||||||||||||||| ||||    
T  20145560 ggggtgtccgaggttcgaaccccggcccttgcataaattatgcaatatc 20145608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 34729532 - 34729469
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagt--gagctaagctcac 286  Q
    ||||||||| |||  ||||||||| | ||||||||||| ||||||||||  |||||||||||||    
T  34729532 ggttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgagagctaagctcac 34729469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 36422566 - 36422494
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||||||||||   || ||||||||| ||||||||||   || |||||| |||||||||||||||||    
T  36422566 gtatctgaggttcgaaccttggcccctgcatatattatgcatttgttcctaccaactgagctaagctcacggg 36422494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 46570001 - 46570070
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| ||||||||| |||| ||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  46570001 tccggggttcgaaccccggcccctgcataaactatgcattatcccttatcaagtgagctaagctcacggg 46570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 25965791 - 25965739
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaac 292  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  25965791 ccctgcataaattatgcattatcccttaccaggtgagctaagctcatgggaac 25965739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 44662487 - 44662559
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    ||||| |||| ||||||||| |||| ||||||||| || |||||||||| |||||| ||||||||||||||||    
T  44662487 ggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttacctagtgagctaagctcac 44662559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 9668850 - 9668912
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||||||| |  |||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  9668850 ggttcgaaccctagtccctgcataaat-atgcattatcccttaccaagtgagctaagctcacgg 9668912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 8249764 - 8249696
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacat 294  Q
    |||||||| |||  ||||||||| |||||||||||||  ||||||||||||||||||||| ||| ||||    
T  8249764 gttcgaaccccgacccctgcatatattatgcattatcctttaccaagtgagctaagctcatggggacat 8249696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 14650570 - 14650507
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| ||| ||||||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  14650570 ggttcgaactccgatccctgcataaattatgcaatgtct-ttaccaattgagctaagctcacggg 14650507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 27424910 - 27424839
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||||||||||| |||| ||||||||| | |||||| |||| ||| |||| |||||||||||||||||    
T  27424910 gtatccgaggttcgaaccccggcccctgcatataatatgcaatatccctt-ccaactgagctaagctcacggg 27424839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 27454082 - 27454006
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||| ||||||||||||||  ||  ||||||| ||||| ||||||||| |||||||| ||||||||||||| ||||    
T  27454082 ggggtgtccgaggttcgaacctcgacccctgcacaaattgtgcattatcccttaccaaatgagctaagctcatggga 27454006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 8133831 - 8133890
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||  ||| |||||||||||||||||||||||  ||| |||||||||||||||||    
T  8133831 gttcgaacttcggcccctgcataaattatgcattatccattatcaagtgagctaagctca 8133890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 29357860 - 29357798
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||||||| |||| ||||||||| || |||||||||| |||| ||||||||||||||||||||    
T  29357860 ggttcgaactccgg-ccctgcatatataatgcattatcccttatcaagtgagctaagctcacgg 29357798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 40273892 - 40273821
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  40273892 ggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 40273821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 23274810 - 23274894
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaa 299  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||| | || | |||||| | ||||||||||||||| ||| |||||    
T  23274810 ggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtc-cctaccaacttagctaagctcacggggacagaaaaa 23274894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 292
Target Start/End: Complemental strand, 23602339 - 23602267
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaac 292  Q
    |||| ||||||||| |||||| ||||||| | ||||||||||  |||| ||| |||||||||||||| |||||    
T  23602339 tccggggttcgaactccggtcactgcatataatatgcattattccttatcaaatgagctaagctcacaggaac 23602267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 47070316 - 47070379
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||||||||| |||||||||||| | || | |||||| |||||||||||||||||    
T  47070316 ggttcgaaccccggtccctgtataaattatgcaatgtc-cataccaactgagctaagctcacggg 47070379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 9877263 - 9877337
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  9877263 ggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 9877337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 23102554 - 23102628
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  23102554 ggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 23102628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 48433734 - 48433805
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| |||| |||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  48433734 ggggtgtccggggtttgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 48433805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 24781101 - 24781028
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaa 291  Q
    ||||||| ||||||||| ||||  |||||||| | |||||| |||| || ||||| |||||||||||||||||||    
T  24781101 gtatccggggttcgaaccccggctcctgcatataatatgcaatatccct-accaactgagctaagctcacgggaa 24781028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 36315998 - 36316073
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcata-aattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||| |||||||||||||| |||| ||||||||| ||| ||||||||  || |||||| ||||||| ||||||||||    
T  36315998 ggggtgtccgaggttcgaaccccggcccctgcatataataatgcatta--tcctaccaactgagctatgctcacggga 36316073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 42554704 - 42554634
Alignment:
Q  215 gggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| ||||||||| ||   ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  42554704 gggtatccggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaatgagctaagctca 42554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 46987151 - 46987086
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    |||| ||||||||| |||| || |||||| |||||||||| || |||||||| ||||||||||||||    
T  46987151 tccggggttcgaaccccggaccttgcatatattatgcattgtc-cttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 15238957 - 15238889
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  15238957 tccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 15238889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 20521027 - 20521103
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaa 297  Q
    |||| ||||| ||| |||| || |||||| |||||| ||| || |||||||| ||||||||||||||||| |||||||    
T  20521027 tccggggttcaaacgccggaccttgcatacattatggattgtc-cttaccaactgagctaagctcacggggacataaa 20521103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 15025216 - 15025156
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||| |||| |||| ||||| ||||| ||||||||||| |||||||| |||| ||||||||    
T  15025216 ggtttgaaccccggcccctgtataaaatatgcattatcccttaccaaatgagttaagctca 15025156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 19752975 - 19753038
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  19752975 ggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 19753038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 26816683 - 26816734
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacata 295  Q
    |||||| ||||||||||||| || ||||| ||||||||||||||||| |||||    
T  26816683 tgcatatattatgcattatccct-accaactgagctaagctcacggggacata 26816734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 29132068 - 29132124
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaa 299  Q
    |||||| || |||||||||| ||| || |||||| |||||||||||| |||||||||    
T  29132068 tgcatacataatgcattatcccttgccgagtgagttaagctcacggggacataaaaa 29132124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 45411680 - 45411629
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaac 292  Q
    ||||||||||||||| || | | ||||||||| ||||||||||||||||||||    
T  45411680 ccctgcataaattatacaatgt-tcttaccaactgagctaagctcacgggaac 45411629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 46243350 - 46243290
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    |||||||| ||| |||||  ||| | ||||||||||| |||||||| ||||||||||||||    
T  46243350 gttcgaactccgatccctatatataatatgcattatcccttaccaaatgagctaagctcac 46243290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 22652754 - 22652683
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| |||||||||||||| ||||||| ||||||||||||||| |||| ||| |||||||||||||    
T  22652754 ggggtgtccggggttcgaacaccggcccctgcacaaattatgcattatcccttatcaaatgagctaagctca 22652683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 40444749 - 40444703
Alignment:
Q  241 cctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  40444749 cctgcatatattatgcattatcccttaccaagtgagctaagctcacg 40444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 31220388 - 31220340
Alignment:
Q  241 cctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||||    
T  31220388 cctgcatatataatgcattatcccttaccaagtgagctaagctcacggg 31220340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 41454851 - 41454922
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  41454851 ggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 41454922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 8350507 - 8350438
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagct 283  Q
    ||||| |||||||||||||| |||| ||||||||| ||| || |||||| |||||||| |||| ||||||    
T  8350507 ggggtgtccgaggttcgaactccggcccctgcatatattgtgtattatcacttaccaaatgagttaagct 8350438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 31406829 - 31406788
Alignment:
Q  216 ggtatccgaggttcgaacaccggtccctgcataaattatgca 257  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  31406829 ggtatccgaggttcgaaccccggcccctgcataaattatgca 31406788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 11810605 - 11810565
Alignment:
Q  250 attatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  11810605 attatgcattatccattaccaagtgagctaagctcacggga 11810565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 13059184 - 13059247
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| || | |||||||||||||||||||| || | |||||| |||||||||||||||||    
T  13059184 ggttcgaacccctgcccctgcataaattatgcattgtc-cctaccaactgagctaagctcacggg 13059247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 13906661 - 13906721
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  13906661 ggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 13906721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 19733106 - 19733162
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagct 283  Q
    ||||||| |||  ||||||||| ||||||||||||| |||||||| |||||||||||    
T  19733106 ttcgaaccccgacccctgcatatattatgcattatcccttaccaaatgagctaagct 19733162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 19957345 - 19957417
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    ||||| |||| |||||||||  ||  ||||||||| | ||||||||||| |||||||||||||||||| ||||    
T  19957345 ggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttaccaagtgagctaagttcac 19957417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 39974903 - 39974840
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||||  ||||||||| |||||||||||| ||| || |||||| ||||||||||||||||||    
T  39974903 gttcgaacctcggtccctgtataaattatgcaatat-tcctaccaactgagctaagctcacggga 39974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 41845464 - 41845524
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| ||| |||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  41845464 ggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaatgagctaagctca 41845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 44828468 - 44828528
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| || | ||||||| ||||| ||||||||| |||||||| |||||||||||||    
T  44828468 ggttcgaaccccagaccctgcacaaattgtgcattatcccttaccaaatgagctaagctca 44828528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 481085 - 481011
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| |||||||||  ||| |||||||||||||||||| | || | |||||| |||||||||||||||||    
T  481085 ggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtc-cctaccaactgagctaagctcacggg 481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 474
Target Start/End: Original strand, 45517864 - 45517947
Alignment:
Q  391 cacataagcaaaaatgagccaaattggtaagaaagtgggtggatagactttttttaaaaattaaaaaatttgcaaggatgtttt 474  Q
    ||||||||| |||||| |||||||| | |||||| ||||   ||||||| |||| |||||  |||||||||||||||| |||||    
T  45517864 cacataagcgaaaatgcgccaaattagcaagaaattgggcccatagactattttaaaaaacaaaaaaatttgcaaggacgtttt 45517947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 19778123 - 19778062
Alignment:
Q  227 ttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| |||| || |||||| |||||||||| || |||||||| |||||||||||||||||    
T  19778123 ttcgaaccccggaccttgcatatattatgcattgtc-cttaccaactgagctaagctcacggg 19778062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 38289268 - 38289338
Alignment:
Q  223 gaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaaca 293  Q
    ||||||||||| |||  ||||||| | ||| ||||||||| |||||||| ||||||||||| | |||||||    
T  38289268 gaggttcgaaccccgacccctgcacatattgtgcattatcccttaccaaatgagctaagcttatgggaaca 38289338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 5326172 - 5326240
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| |||||||||||||| | ||||||| |  ||||| ||||||| ||||| |||||||||||||||||    
T  5326172 tccggggttcgaacaccggcctctgcatataaaatgcaatatctct-accaactgagctaagctcacggg 5326240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 8349519 - 8349576
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagct 283  Q
    |||||||| |||| ||||||||| ||| || |||||| |||||||| |||||||||||    
T  8349519 gttcgaactccggcccctgcatatattctgtattatcacttaccaaatgagctaagct 8349576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 10621425 - 10621470
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| || |||||||||| |||| |||||||||||||||||    
T  10621425 ccctgcatacataatgcattatcccttatcaagtgagctaagctca 10621470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 15856502 - 15856574
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    ||||| ||||||||| |||| |||||||||| |||||||||||| | || | |||||| |||| ||||||||||    
T  15856502 ggggtgtccgaggtttgaaccccggtccctgtataaattatgcaatgtc-cctaccaactgagttaagctcacg 15856574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 22534625 - 22534698
Alignment:
Q  391 cacataagcaaaaatgagccaaattggtaagaaagtgggtggatagactttttttaaaaattaaaaaatttgca 464  Q
    ||||||||||||||||||||||||  | ||||||||||||  |  ||||||||| |||||  ||||| ||||||    
T  22534625 cacataagcaaaaatgagccaaatcagcaagaaagtgggtccaaggacttttttaaaaaacaaaaaattttgca 22534698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 23178893 - 23178961
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  23178893 tccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 23178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 27750902 - 27750966
Alignment:
Q  222 cgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||||||||||| |||| || |||||| |||||||| | || |||||||| |||||||||||||||    
T  27750902 cgaggttcgaaccccggaccttgcatatattatgcactgtc-cttaccaactgagctaagctcacg 27750966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 1032630 - 1032570
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| || | ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  1032630 ggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 1032570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 3311511 - 3311435
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||| |||| ||||||||| | | |||||||||||||| | ||||||| ||| |||| |||| |||||||| ||||    
T  3311511 ggggtgtccggggttcgaaccctgatccctgcataaattgtacattatcccttgccaaatgagttaagctcatggga 3311435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 11690985 - 11691036
Alignment:
Q  235 ccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||| ||||||||||| |||| |||||| ||||||||||||| ||||||||||    
T  11690985 ccggcccctgcataaaatatgtattatc-cttaccaagtgaggtaagctcacg 11691036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 18080984 - 18080936
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||||||| | ||||||||||| ||||||||||||| |||| ||||||    
T  18080984 ccctgcatataatatgcattatcccttaccaagtgagttaagatcacgg 18080936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 23816832 - 23816789
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||    
T  23816832 tgcatatattatgcattatc-cttaccaactgagctaagctcacg 23816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 24458388 - 24458317
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| ||||||||| |||| ||||||||| | ||| || |||| ||| |||| |||||||||||||||||    
T  24458388 gtatccggggttcgaaccccggcccctgcatataatatacaatatccctt-ccaactgagctaagctcacggg 24458317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 26022310 - 26022247
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  26022310 ggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 26022247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 42877097 - 42877034
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||||  ||| |||||||||||||||||| | || | |||||| |||||||||||||||||    
T  42877097 ggttcgaaccacggcccctgcataaattatgcaatgtc-cctaccaattgagctaagctcacggg 42877034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 13539874 - 13539936
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    ||||||||| |  |||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  13539874 ggttcgaaccctagtccctgcataaat-atgcattatcccttaccaagtgagctaagctcacgg 13539936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 38690737 - 38690666
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||  ||||||||| | ||||||||||| ||||||||||||||||||||||    
T  38690737 ggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgagctaagctca 38690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 29889802 - 29889874
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcac 286  Q
    |||| |||||| |||||||| |||| ||||||||| | ||||||||||| |||||  ||||||||||||||||    
T  29889802 ggggcatccgaagttcgaaccccggcccctgcatataatatgcattatcccttacatagtgagctaagctcac 29889874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 55853115 - 55853178
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||||||||| ||||||||| | |||||| |||||| |||||| |||||||||||||||||    
T  55853115 ggttcgaacaccggcccctgcatataatatgcaatatctc-taccaactgagctaagctcacggg 55853178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 11491243 - 11491313
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctc 284  Q
    ||||| |||| ||||||||| |||| ||||||| ||||||||||||||| |||  ||| ||||||||||||    
T  11491243 ggggtgtccggggttcgaactccggcccctgcacaaattatgcattatcccttgtcaaatgagctaagctc 11491313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 27862855 - 27862936
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacata 295  Q
    ||||| |||| ||||||||| || | ||||||| ||||| ||||||||| |||| ||| ||||||||||||| ||| |||||    
T  27862855 ggggtgtccggggttcgaaccccagcccctgcacaaattgtgcattatcccttatcaaatgagctaagctcatggggacata 27862936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 35733419 - 35733371
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    |||||||| |||||||| ||||| |||||||||| ||||||||||||||    
T  35733419 ccctgcatcaattatgcgttatcccttaccaagtaagctaagctcacgg 35733371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 45139883 - 45139954
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaac 292  Q
    |||| ||||||||| |||| ||||||||||||||| || | || | |||||| ||||||||||||||||||||    
T  45139883 tccggggttcgaaccccggcccctgcataaattatacaatgtc-cctaccaactgagctaagctcacgggaac 45139954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 49901557 - 49901482
Alignment:
Q  213 cggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  49901557 cggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 49901482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 8965168 - 8965094
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  8965168 ggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 8965094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 50457716 - 50457786
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaa 291  Q
    |||| ||||||||| | || ||||||||| | |||||| |||| |||||||| |||||||||||||||||||    
T  50457716 tccggggttcgaaccctggcccctgcatataatatgcaatatc-cttaccaactgagctaagctcacgggaa 50457786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 50815778 - 50815707
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| ||||| |||||||||  ||| ||| |||||||||||||    
T  50815778 ggggtgtccggggttcgaaccccggcccctgcacaaattgtgcattatcctttatcaaatgagctaagctca 50815707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 51890871 - 51890797
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| |||||||||||||||||| | || | | |||| |||||||||||||||||    
T  51890871 ggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtc-cctgccaactgagctaagctcacggg 51890797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 7230344 - 7230279
Alignment:
Q  221 ccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacg 287  Q
    |||||||| |||| |||| || |||||| |||||||||| || |||||||| |||||||||||||||    
T  7230344 ccgaggtttgaaccccggaccttgcatatattatgcattgtc-cttaccaactgagctaagctcacg 7230279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 29430567 - 29430497
Alignment:
Q  215 gggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||| |||| ||||||||| ||| || ||||||| | |||||||| || |||||||||| |||||||||||    
T  29430567 gggtgtccggggttcgaaccccgatcactgcatataatatgcattgtcccttaccaagtaagctaagctca 29430497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 39387523 - 39387473
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||| ||||||||||||||| |||||||| ||||||||| ||| ||||    
T  39387523 ccctgcacaaattatgcattatcccttaccaaatgagctaagttcatggga 39387473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 292
Target Start/End: Original strand, 43362192 - 43362270
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaac 292  Q
    ||||| |||| ||||||||| |||  ||||| ||| ||| ||||||||| |||| ||| ||||||||||||| ||||||    
T  43362192 ggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaatgagctaagctcatgggaac 43362270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 45665038 - 45665072
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcatt 259  Q
    |||||||||||||||||||||||| ||||||||||    
T  45665038 ggttcgaacaccggtccctgcatatattatgcatt 45665072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 624543 - 624479
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||||| || | |||||||||||||||||| | || |||||||| |||| |||||||||||||    
T  624543 ggttcgaacccctgcccctgcataaattatgcaatgtc-cttaccaactgagttaagctcacggga 624479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 16556511 - 16556446
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    ||||||||| |||  ||||||| | ||| ||||||||| |||||||| ||||||||||||| ||||    
T  16556511 ggttcgaaccccgacccctgcacatattgtgcattatcccttaccaaatgagctaagctcatggga 16556446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 41971345 - 41971394
Alignment:
Q  236 cggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| ||||| ||||| ||||||||| |||||||| |||||||||||||    
T  41971345 cggtcgctgcacaaattgtgcattatcacttaccaaatgagctaagctca 41971394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 51974812 - 51974747
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    |||||||||||||  |||  ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  51974812 tccgaggttcgaatcccgacccctgcacatattgtgcattatcccttaccaaatgagctaagctca 51974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 54593810 - 54593859
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||||||||||||||||| ||||| ||| |||  |||||||||||    
T  54593810 ccctgcataaattatgcattatcccttacgaagggagggaagctcacggg 54593859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 55055984 - 55055916
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||| |||||||||  ||| ||||||||||| |||||||| || || ||||| |||||||||||||||||    
T  55055984 tccggggttcgaacctcggcccctgcataaaatatgcattgtccct-accaactgagctaagctcacggg 55055916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 56497627 - 56497683
Alignment:
Q  243 tgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaaa 300  Q
    |||||| |||||||||| || |||||||| ||||||||||||||||| ||| ||||||    
T  56497627 tgcatatattatgcattgtc-cttaccaattgagctaagctcacggggacaaaaaaaa 56497683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 3784960 - 3784913
Alignment:
Q  240 ccctgcataaattatgcattatctcttaccaagtgagctaagctcacgg 288  Q
    |||||||||||||||||| |||| || ||||| ||||||||||||||||    
T  3784960 ccctgcataaattatgcaatatccct-accaattgagctaagctcacgg 3784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 3879247 - 3879175
Alignment:
Q  390 gcacataagcaaaaatgagccaaattggtaagaaagtgggtggatagactttttttaaaaattaaaaaatttg 462  Q
    |||||||||||||||||||||||||  | ||||||||| ||  |  ||||||||| |||||| ||||| ||||    
T  3879247 gcacataagcaaaaatgagccaaatcagcaagaaagtgagtccaaggacttttttaaaaaataaaaaattttg 3879175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 7686269 - 7686332
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||| ||||||||| |  ||||| ||||||| ||||| |||||||||||||||||    
T  7686269 ggttcgaaccccggcccctgcatataaaatgcaatatctct-accaactgagctaagctcacggg 7686332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 13210199 - 13210259
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||| ||||||| | ||| ||||||||| || ||||| |||||||||||||    
T  13210199 ggttcgaaccccggcccctgcacatattgtgcattatccctgaccaaatgagctaagctca 13210259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 40406984 - 40407056
Alignment:
Q  214 ggggtatccgaggttcgaacacc-ggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| || || ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  40406984 ggggtgtccggggttcgaacccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 40407056  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 45849110 - 45849047
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| || | ||||||||||| |||||| |||| || ||||| |||||||||||||||||    
T  45849110 ggttcgaactccagcccctgcataaaatatgcaatatccct-accaactgagctaagctcacggg 45849047  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 5641726 - 5641788
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    |||||||| ||||||| ||||||||||||||||||||  |||||||||||| ||||| ||||||    
T  5641726 gttcgaaccccggtcc-tgcataaattatgcattatccattaccaagtgagttaagcccacggg 5641788  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 6228284 - 6228355
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  6228284 ggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 6228355  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 15717048 - 15717108
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||| ||||||| | ||| ||||||||| |||||||| |||||||||||||    
T  15717048 ggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 15717108  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 2251912 - 2251838
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  2251912 ggggtgtccggggttcgaaccccggcccctgcatatagtatgcaatatccct-accaactgagctaagctcacggg 2251838  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 3338368 - 3338402
Alignment:
Q  252 tatgcattatctcttaccaagtgagctaagctcac 286  Q
    ||||||||||||||||||||||||||||| |||||    
T  3338368 tatgcattatctcttaccaagtgagctaaactcac 3338402  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 4450326 - 4450254
Alignment:
Q  221 ccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacat 294  Q
    ||||| ||||||| |||| || |||||| |||||||||| ||| ||| ||| |||||||||||||||| |||||    
T  4450326 ccgagattcgaaccccggaccttgcatatattatgcattgtct-ttatcaactgagctaagctcacggaaacat 4450254  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 32670061 - 32670129
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacat 294  Q
    ||||||||| || | |||||||||||||||||| ||| || |||||| ||||||||||||| ||| ||||    
T  32670061 ggttcgaacccctgcccctgcataaattatgcaatat-tcctaccaattgagctaagctcaaggggacat 32670129  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 4869706 - 4869769
Alignment:
Q  226 gttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggga 290  Q
    |||||||| |||| ||||||||| | |||||| |||| || ||||| ||||||||||||||||||    
T  4869706 gttcgaaccccggcccctgcatataatatgcagtatccct-accaactgagctaagctcacggga 4869769  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 20568292 - 20568355
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||||| |||  ||||||||| |||||||| | || |||||||| |||||||||||||||||    
T  20568292 ggttcgaaccccgacccctgcatatattatgcaatgtc-cttaccaactgagctaagctcacggg 20568355  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 32611556 - 32611635
Alignment:
Q  220 tccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacgggaacataaaaaa 300  Q
    |||| ||||||||| ||||  |||||||| | |||||| |||| || ||||| ||||||||||||| ||||| ||||||||    
T  32611556 tccggggttcgaaccccggctcctgcatataatatgcaatatccct-accaactgagctaagctcatgggaatataaaaaa 32611635  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 32813649 - 32813720
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| ||||||||| |||| ||||||||| | |||||| |||| | |||||| ||| |||||||||||||    
T  32813649 gtatccggggttcgaaccccggcccctgcatataatatgcaatatc-cgtaccaactgaactaagctcacggg 32813720  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 121834 - 121894
Alignment:
Q  225 ggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||||||| |||||||||||| | ||| ||||||||| | |||||| |||||||||||||    
T  121834 ggttcgaaccccggtccctgcacatattgtgcattatcccctaccaaatgagctaagctca 121894  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 10822 - 10896
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||| |||| ||||||||| |||| ||||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  10822 ggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccct-accaactgagctaagctcacggg 10896  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 419783 - 419712
Alignment:
Q  214 ggggtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctca 285  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| | ||||||| |||||||| |||||||||||||    
T  419783 ggggtgtccggggttcgaaccccggcccctgcacatattgttcattatcccttaccaaatgagctaagctca 419712  T

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Target: scaffold0608 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 9037 - 8966
Alignment:
Q  217 gtatccgaggttcgaacaccggtccctgcataaattatgcattatctcttaccaagtgagctaagctcacggg 289  Q
    ||||||| ||||||||| ||||  |||||||| | |||||| |||| || ||||| |||||||||||||||||    
T  9037 gtatccggggttcgaactccggctcctgcatataatatgcaatatccct-accaactgagctaagctcacggg 8966  T

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Target: scaffold0562 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 10083 - 10011
Alignment:
Q  390 gcacataagcaaaaatgagccaaattggtaagaaagtgggtggatagactttttttaaaaattaaaaaatttg 462  Q
    |||||||||||||||||||||||||  | ||||||||| ||  |  ||||||||| |||||| ||||| ||||    
T  10083 gcacataagcaaaaatgagccaaatcagcaagaaagtgagtccaaggacttttttaaaaaataaaaaattttg 10011  T

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