View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20017_high_25 (Length: 211)
Name: NF20017_high_25
Description: NF20017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20017_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 13863849 - 13864020
Alignment:
| Q |
16 |
atggcaaagatcaaataaataaattatcatattattacgtaaacgtttgaaaaatcaattcaaccagacagacaaaaacatctttgtaatcatcatcatc |
115 |
Q |
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| T |
13863849 |
atggcaaagatcaaataaataaattatcatattattacgtaaacgtttgaaaaatcaattcaaccagacagacaaaaacatctttgta---atcatcatc |
13863945 |
T |
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| Q |
116 |
ggggtctcagattgatttgattgtcttcaacacatcactgctacttaca-ccccccaattctatcttcttctgca |
189 |
Q |
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| T |
13863946 |
ggcgtctcagattgatttgattgtcttcaacacatcactgctacttacacccccccaattctatcttcttctgca |
13864020 |
T |
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