View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20017_high_5 (Length: 447)
Name: NF20017_high_5
Description: NF20017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20017_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 19 - 427
Target Start/End: Complemental strand, 34091281 - 34090881
Alignment:
| Q |
19 |
ctatatgcactttgaggctttcaacaatcttaatgagtaatgactcatcgagatctaactagcctgaaacttacttttcgtaatgagtagtctctcactc |
118 |
Q |
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|||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
34091281 |
ctatatgcactttgaggctttcaacaatcttaatga-------ctcgtcgagatctaactcgcctgaaacttacttttcgtaatgagtagtctctcactc |
34091189 |
T |
|
| Q |
119 |
aactagtcctagaaaccggtttgccttgccatagaccatagtagtcggaaatcaatacaagaaacagcaccatttttgtaagtgtgtcgacatagcaatt |
218 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
34091188 |
aactagtcctggaaaccggtttgccttgccatagaccatagtagtcggaaatcaatacaagaaacagcaccacttttgtaagtgtgtcgacatagcaatt |
34091089 |
T |
|
| Q |
219 |
aaagacaaaaatcaacgttgaatatcggaaatgtagactggggtgctacgtttgtttactacaacatattttaaaatattgaccttgattcattctgacc |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34091088 |
aaagacaaaaatcaacgttgaatatcggaaatgtagacttgggtgctacgtttgtttactacaacatattttaaaatattgaccttgattcattctgacc |
34090989 |
T |
|
| Q |
319 |
cttgtgaaaagttcaacattcaattaattcacgttgacccaaacccaatgctctacttagtaccctgaaaagcattatgtttgctattcctatttaacca |
418 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34090988 |
cttgtgaaaa-ttcaacattcaattaattcacgttgacccaaacccaatgctctacttagtaccctgaaaagcattatgtttgctattcctatttaacca |
34090890 |
T |
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| Q |
419 |
aattttggt |
427 |
Q |
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||||||||| |
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| T |
34090889 |
aattttggt |
34090881 |
T |
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