View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20019_high_12 (Length: 408)
Name: NF20019_high_12
Description: NF20019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20019_high_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 13 - 408
Target Start/End: Complemental strand, 42732582 - 42732187
Alignment:
| Q |
13 |
aatataagcattccctatagagaaggacaatgagtcagagcttatagtaataggttatacaagtgacaacgaagaggctctttctcaggagtaattgggg |
112 |
Q |
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| T |
42732582 |
aatataagcattccctatagagaaggacaatgagtcagagcttatagtaatagattatacaagtgacaacgaagaggctctttctcaggagtaattgggg |
42732483 |
T |
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| Q |
113 |
cctaatggactgttctattgggtctcagcccttaatgtatagtgttggtacgtctagatcaattcaacagtgacacgtgcagtttacttaattccattac |
212 |
Q |
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| T |
42732482 |
cctaatggactgttctattgggtctcagcccttaatgtatagtgttggtacgtctagatcaattcaacagtgacacgtgcagtttacttaattccatcac |
42732383 |
T |
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| Q |
213 |
cattctctgcagctcttttgttgtagtttaatttcattgcctgaaggagagaaagaaatgcagtttgccaaccacaaatcagtaacaggatcagcatatt |
312 |
Q |
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| T |
42732382 |
cattctctgcagctcttttgttgcagtttaatttcattgcctggaggagagaaagaaatgcagtttgccaaccacaaatcagtaacaggatcagcatatt |
42732283 |
T |
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| Q |
313 |
agtatattggtcccaaaaaatttaagtgcaaataattactataaataataaaggtgagtcttatgtcgtctgaagctttgttgatacgtacttatc |
408 |
Q |
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| T |
42732282 |
agtatattggtcccaaaaaatttaagtgcgaataattactataaataataaaggtgagtcttatatcgtctgaagctttgttgatacgtacttatc |
42732187 |
T |
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