View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20019_high_5 (Length: 612)

Name: NF20019_high_5
Description: NF20019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20019_high_5
NF20019_high_5
[»] chr7 (62 HSPs)
chr7 (125-597)||(45272429-45272923)
chr7 (60-364)||(45276031-45276323)
chr7 (403-597)||(45278027-45278221)
chr7 (111-286)||(45284003-45284165)
chr7 (96-207)||(45295363-45295474)
chr7 (96-207)||(45304323-45304434)
chr7 (417-588)||(3796796-3796971)
chr7 (431-569)||(10617220-10617361)
chr7 (451-569)||(19251890-19252011)
chr7 (419-588)||(10068787-10068960)
chr7 (6-77)||(45272347-45272418)
chr7 (487-586)||(43863686-43863784)
chr7 (13-59)||(38911292-38911338)
chr7 (472-558)||(40996241-40996331)
chr7 (472-557)||(977266-977355)
chr7 (472-557)||(34695763-34695852)
chr7 (8-59)||(41860275-41860326)
chr7 (472-557)||(43392138-43392227)
chr7 (472-557)||(44343114-44343201)
chr7 (444-557)||(44622972-44623089)
chr7 (1-59)||(34000255-34000313)
chr7 (500-557)||(7717982-7718039)
chr7 (500-557)||(7718913-7718970)
chr7 (500-557)||(18916557-18916614)
chr7 (500-557)||(34009490-34009547)
chr7 (5-58)||(34934463-34934516)
chr7 (500-557)||(43580728-43580785)
chr7 (2-54)||(48527188-48527240)
chr7 (4-59)||(8227342-8227397)
chr7 (472-557)||(39218995-39219084)
chr7 (14-57)||(46551869-46551912)
chr7 (1-59)||(2618672-2618730)
chr7 (1-59)||(20103464-20103522)
chr7 (473-557)||(20275002-20275090)
chr7 (6-52)||(23221392-23221438)
chr7 (5-59)||(24839481-24839535)
chr7 (1-59)||(27544950-27545008)
chr7 (5-59)||(32228432-32228486)
chr7 (529-563)||(43187063-43187097)
chr7 (6-51)||(15015242-15015287)
chr7 (6-59)||(25251503-25251556)
chr7 (6-51)||(28187562-28187607)
chr7 (500-557)||(30441635-30441692)
chr7 (500-557)||(31401860-31401917)
chr7 (10-59)||(36803831-36803880)
chr7 (5-58)||(37451251-37451304)
chr7 (3-52)||(42043078-42043127)
chr7 (13-46)||(45425459-45425492)
chr7 (13-54)||(48007569-48007610)
chr7 (3-59)||(964753-964809)
chr7 (13-53)||(3948053-3948093)
chr7 (13-53)||(8879769-8879809)
chr7 (6-46)||(19684227-19684267)
chr7 (13-53)||(25246770-25246810)
chr7 (13-61)||(27263332-27263380)
chr7 (13-61)||(27270226-27270274)
chr7 (13-53)||(28012636-28012676)
chr7 (6-50)||(35001145-35001189)
chr7 (13-61)||(35142171-35142219)
chr7 (1-61)||(39280828-39280888)
chr7 (13-53)||(39926560-39926600)
chr7 (13-61)||(42829256-42829304)
[»] chr1 (55 HSPs)
chr1 (446-588)||(9577189-9577334)
chr1 (448-557)||(47784679-47784792)
chr1 (486-588)||(26284216-26284318)
chr1 (487-582)||(46601496-46601594)
chr1 (471-557)||(730578-730668)
chr1 (471-557)||(6303888-6303978)
chr1 (472-557)||(45536494-45536583)
chr1 (472-556)||(47653952-47654040)
chr1 (2-59)||(9639828-9639885)
chr1 (5-58)||(10480708-10480761)
chr1 (471-558)||(31571956-31572047)
chr1 (1-58)||(36371050-36371107)
chr1 (1-58)||(38448876-38448933)
chr1 (486-547)||(41599822-41599883)
chr1 (500-557)||(49418504-49418561)
chr1 (5-61)||(3693810-3693866)
chr1 (18-58)||(5533879-5533919)
chr1 (7-59)||(10292929-10292981)
chr1 (6-58)||(17396702-17396754)
chr1 (471-557)||(21222655-21222745)
chr1 (500-588)||(31622361-31622449)
chr1 (541-581)||(44289193-44289233)
chr1 (13-60)||(15729422-15729469)
chr1 (3-58)||(31401665-31401720)
chr1 (4-59)||(39096853-39096908)
chr1 (1-52)||(41926822-41926873)
chr1 (472-557)||(49197874-49197963)
chr1 (6-53)||(50849088-50849135)
chr1 (13-59)||(7484716-7484762)
chr1 (3-52)||(10654459-10654509)
chr1 (6-52)||(10841900-10841946)
chr1 (1-59)||(19620569-19620627)
chr1 (1-59)||(23397333-23397391)
chr1 (2-60)||(32950772-32950830)
chr1 (6-55)||(11242000-11242049)
chr1 (1-58)||(17139527-17139584)
chr1 (13-58)||(18056738-18056783)
chr1 (500-557)||(19451394-19451451)
chr1 (13-58)||(24324422-24324467)
chr1 (527-588)||(27199018-27199079)
chr1 (6-59)||(30678828-30678881)
chr1 (3-52)||(33153892-33153941)
chr1 (3-52)||(39492321-39492370)
chr1 (1-58)||(45481487-45481544)
chr1 (14-59)||(47528470-47528515)
chr1 (500-557)||(47781182-47781239)
chr1 (4-53)||(49875612-49875661)
chr1 (500-557)||(50192184-50192241)
chr1 (2-59)||(52441522-52441579)
chr1 (3-59)||(6000155-6000211)
chr1 (13-61)||(16033472-16033520)
chr1 (525-557)||(37014405-37014437)
chr1 (1-57)||(41677600-41677656)
chr1 (472-554)||(45759574-45759660)
chr1 (500-556)||(48525018-48525074)
[»] chr3 (45 HSPs)
chr3 (471-588)||(12105133-12105253)
chr3 (419-588)||(6976029-6976201)
chr3 (470-588)||(12103938-12104059)
chr3 (472-588)||(23535717-23535837)
chr3 (491-588)||(6034775-6034872)
chr3 (470-556)||(5825889-5825978)
chr3 (422-522)||(15492554-15492657)
chr3 (495-557)||(38772460-38772522)
chr3 (525-588)||(50899346-50899409)
chr3 (472-557)||(54625981-54626070)
chr3 (13-59)||(22462305-22462351)
chr3 (472-557)||(20498702-20498791)
chr3 (472-557)||(33807276-33807365)
chr3 (487-588)||(7318979-7319081)
chr3 (13-59)||(17588355-17588401)
chr3 (487-588)||(45135598-45135700)
chr3 (13-55)||(47039424-47039466)
chr3 (1-59)||(53633627-53633685)
chr3 (500-557)||(995596-995653)
chr3 (6-59)||(2563922-2563975)
chr3 (500-557)||(3205630-3205687)
chr3 (1-58)||(7464501-7464558)
chr3 (500-557)||(25418893-25418950)
chr3 (500-557)||(52080484-52080541)
chr3 (13-61)||(51882222-51882270)
chr3 (472-557)||(16008202-16008291)
chr3 (472-557)||(33996103-33996192)
chr3 (472-557)||(35338176-35338265)
chr3 (4-59)||(37436952-37437007)
chr3 (472-557)||(51699161-51699250)
chr3 (5-59)||(7827501-7827555)
chr3 (5-59)||(7829889-7829943)
chr3 (466-513)||(39842267-39842318)
chr3 (5-55)||(46469274-46469324)
chr3 (500-557)||(10138837-10138894)
chr3 (500-557)||(19254412-19254469)
chr3 (13-58)||(21914093-21914138)
chr3 (500-557)||(29448548-29448605)
chr3 (2-59)||(33633329-33633386)
chr3 (1-53)||(7651185-7651237)
chr3 (13-53)||(11574252-11574292)
chr3 (13-61)||(32753819-32753867)
chr3 (13-53)||(43334534-43334574)
chr3 (13-53)||(47377371-47377411)
chr3 (6-58)||(48376829-48376881)
[»] chr4 (70 HSPs)
chr4 (419-557)||(8712199-8712340)
chr4 (487-559)||(26340483-26340556)
chr4 (419-588)||(9163510-9163681)
chr4 (500-588)||(11090684-11090772)
chr4 (487-557)||(42721869-42721940)
chr4 (487-557)||(45341510-45341581)
chr4 (431-588)||(20021787-20021937)
chr4 (529-587)||(36478907-36478965)
chr4 (519-588)||(56444461-56444530)
chr4 (419-522)||(12913653-12913758)
chr4 (527-588)||(12913791-12913852)
chr4 (13-58)||(18635524-18635569)
chr4 (500-557)||(41880705-41880762)
chr4 (500-557)||(46635339-46635396)
chr4 (472-558)||(28541969-28542059)
chr4 (2-53)||(6459935-6459986)
chr4 (1-60)||(7371558-7371617)
chr4 (472-557)||(24130565-24130654)
chr4 (472-557)||(25331559-25331648)
chr4 (472-557)||(30009406-30009495)
chr4 (487-588)||(5104840-5104942)
chr4 (13-59)||(29910454-29910500)
chr4 (13-59)||(43183015-43183061)
chr4 (3-53)||(53530008-53530058)
chr4 (500-557)||(7246809-7246866)
chr4 (500-557)||(16020570-16020627)
chr4 (13-54)||(19124644-19124685)
chr4 (6-59)||(21266897-21266950)
chr4 (500-557)||(22202571-22202628)
chr4 (500-557)||(23465403-23465460)
chr4 (13-53)||(14136090-14136130)
chr4 (3-59)||(36203229-36203285)
chr4 (3-55)||(42316836-42316888)
chr4 (1-53)||(54500568-54500620)
chr4 (472-557)||(3437004-3437093)
chr4 (1-60)||(10336996-10337055)
chr4 (525-588)||(16019800-16019863)
chr4 (472-557)||(25446567-25446656)
chr4 (2-53)||(29908055-29908106)
chr4 (431-513)||(36479084-36479169)
chr4 (6-53)||(39842027-39842074)
chr4 (1-60)||(46676508-46676567)
chr4 (472-557)||(49469694-49469783)
chr4 (6-49)||(56096207-56096250)
chr4 (1-59)||(7230273-7230331)
chr4 (13-59)||(7922272-7922318)
chr4 (13-59)||(11314711-11314757)
chr4 (1-59)||(14202489-14202547)
chr4 (8-58)||(16432974-16433024)
chr4 (1-59)||(18915056-18915114)
chr4 (13-59)||(19332323-19332369)
chr4 (3-61)||(19908683-19908741)
chr4 (500-558)||(32952143-32952201)
chr4 (1-59)||(42845018-42845076)
chr4 (1-59)||(43722758-43722816)
chr4 (500-558)||(55975064-55975122)
chr4 (2-59)||(7030904-7030961)
chr4 (13-58)||(16733541-16733586)
chr4 (13-58)||(24488416-24488461)
chr4 (5-58)||(38939548-38939601)
chr4 (500-556)||(1113643-1113699)
chr4 (13-57)||(6460100-6460144)
chr4 (5-53)||(17134124-17134172)
chr4 (525-557)||(28371346-28371378)
chr4 (525-557)||(36727644-36727676)
chr4 (501-557)||(41321206-41321262)
chr4 (6-57)||(47016610-47016664)
chr4 (1-61)||(49473636-49473696)
chr4 (1-53)||(49952579-49952631)
chr4 (500-548)||(53276285-53276333)
[»] chr8 (38 HSPs)
chr8 (487-597)||(29930389-29930499)
chr8 (416-569)||(29976847-29977003)
chr8 (519-588)||(4949651-4949720)
chr8 (501-569)||(2475569-2475637)
chr8 (471-557)||(43959964-43960054)
chr8 (525-588)||(4403497-4403560)
chr8 (472-557)||(10391807-10391896)
chr8 (1-60)||(19778057-19778116)
chr8 (472-557)||(23114882-23114971)
chr8 (445-588)||(39189544-39189679)
chr8 (472-557)||(42734909-42734998)
chr8 (472-557)||(42936906-42936995)
chr8 (472-557)||(42937899-42937988)
chr8 (2-52)||(574384-574434)
chr8 (471-558)||(5576246-5576337)
chr8 (500-557)||(7506551-7506608)
chr8 (1-58)||(29621268-29621325)
chr8 (500-557)||(33850870-33850927)
chr8 (5-58)||(43073450-43073503)
chr8 (13-53)||(1877684-1877724)
chr8 (61-95)||(7241420-7241454)
chr8 (458-582)||(13477980-13478106)
chr8 (550-588)||(14028039-14028077)
chr8 (472-556)||(41479661-41479749)
chr8 (13-59)||(42367722-42367768)
chr8 (13-58)||(7679896-7679941)
chr8 (13-58)||(17062361-17062406)
chr8 (13-58)||(17585952-17585997)
chr8 (500-557)||(24501435-24501492)
chr8 (500-557)||(26373983-26374040)
chr8 (2-59)||(29293170-29293227)
chr8 (13-49)||(7722802-7722838)
chr8 (13-61)||(10967203-10967251)
chr8 (5-53)||(19701358-19701406)
chr8 (2-58)||(27718905-27718961)
chr8 (13-53)||(28084281-28084321)
chr8 (5-53)||(28439958-28440006)
chr8 (13-61)||(30623284-30623332)
[»] chr2 (49 HSPs)
chr2 (487-557)||(11997296-11997367)
chr2 (13-57)||(9459079-9459123)
chr2 (432-515)||(10125121-10125207)
chr2 (13-61)||(16204839-16204887)
chr2 (472-557)||(14198296-14198385)
chr2 (473-557)||(305208-305296)
chr2 (13-59)||(37320539-37320585)
chr2 (500-557)||(12407882-12407939)
chr2 (500-557)||(12419942-12419999)
chr2 (1-58)||(24548005-24548062)
chr2 (2-47)||(41853370-41853415)
chr2 (500-557)||(44766382-44766439)
chr2 (527-563)||(10125093-10125129)
chr2 (1-57)||(10991537-10991593)
chr2 (4-60)||(12893257-12893313)
chr2 (472-557)||(16270244-16270334)
chr2 (5-53)||(27412850-27412898)
chr2 (13-53)||(40967393-40967433)
chr2 (472-557)||(24776770-24776859)
chr2 (3-58)||(28202291-28202346)
chr2 (472-557)||(35317583-35317672)
chr2 (13-60)||(44694680-44694727)
chr2 (4-58)||(1861822-1861876)
chr2 (13-59)||(5676732-5676778)
chr2 (13-55)||(10076871-10076913)
chr2 (1-59)||(12124538-12124596)
chr2 (13-59)||(24393238-24393284)
chr2 (4-50)||(32844865-32844911)
chr2 (13-59)||(39068730-39068776)
chr2 (5-55)||(44926415-44926465)
chr2 (3-52)||(13000685-13000734)
chr2 (2-59)||(17842723-17842780)
chr2 (13-58)||(18231495-18231540)
chr2 (13-58)||(19179072-19179117)
chr2 (500-557)||(21136702-21136759)
chr2 (1-54)||(24593374-24593427)
chr2 (5-58)||(29798531-29798584)
chr2 (2-59)||(33063979-33064036)
chr2 (13-58)||(35727431-35727476)
chr2 (13-58)||(39761432-39761477)
chr2 (13-58)||(42181325-42181370)
chr2 (13-53)||(2661070-2661110)
chr2 (3-59)||(7206118-7206174)
chr2 (7-59)||(7640651-7640703)
chr2 (13-53)||(10332297-10332337)
chr2 (13-57)||(19512850-19512894)
chr2 (3-59)||(21558818-21558874)
chr2 (1-53)||(31815897-31815949)
chr2 (2-58)||(34977198-34977254)
[»] chr5 (45 HSPs)
chr5 (445-588)||(8408564-8408700)
chr5 (1-58)||(8882409-8882466)
chr5 (472-557)||(21147627-21147713)
chr5 (13-58)||(7630198-7630243)
chr5 (3-59)||(9123857-9123913)
chr5 (472-557)||(849777-849866)
chr5 (472-557)||(7016379-7016468)
chr5 (2-53)||(8545000-8545051)
chr5 (525-588)||(9688463-9688526)
chr5 (6-53)||(23118066-23118113)
chr5 (472-557)||(33655694-33655783)
chr5 (13-59)||(34206220-34206266)
chr5 (1-55)||(34702487-34702541)
chr5 (500-557)||(4771880-4771937)
chr5 (471-558)||(6461223-6461314)
chr5 (3-47)||(31305898-31305942)
chr5 (3-46)||(4432122-4432165)
chr5 (1-52)||(4763196-4763247)
chr5 (13-52)||(16076431-16076470)
chr5 (3-58)||(35109394-35109449)
chr5 (500-558)||(5272550-5272608)
chr5 (13-59)||(18147577-18147623)
chr5 (1-55)||(21316879-21316933)
chr5 (1-55)||(28604428-28604482)
chr5 (13-59)||(30893926-30893972)
chr5 (13-51)||(31159430-31159468)
chr5 (13-59)||(40445976-40446022)
chr5 (13-58)||(17144473-17144518)
chr5 (3-52)||(19783647-19783696)
chr5 (6-55)||(20211670-20211719)
chr5 (1-54)||(26409251-26409304)
chr5 (13-58)||(27679492-27679537)
chr5 (500-557)||(32157633-32157690)
chr5 (1-58)||(39914895-39914952)
chr5 (500-557)||(43319332-43319389)
chr5 (3-59)||(2249428-2249484)
chr5 (1-53)||(17672310-17672362)
chr5 (1-53)||(25979843-25979895)
chr5 (6-58)||(29695009-29695061)
chr5 (3-47)||(32460016-32460060)
chr5 (3-59)||(32565517-32565573)
chr5 (3-59)||(40507911-40507967)
chr5 (1-53)||(42515806-42515858)
chr5 (1-33)||(43135203-43135235)
chr5 (2-54)||(43396852-43396904)
[»] chr6 (29 HSPs)
chr6 (8-59)||(6470633-6470684)
chr6 (1-54)||(4450260-4450313)
chr6 (487-588)||(23929214-23929315)
chr6 (472-557)||(6197053-6197142)
chr6 (4-59)||(8381207-8381262)
chr6 (5-60)||(9987073-9987128)
chr6 (472-557)||(29077152-29077241)
chr6 (472-557)||(29112124-29112213)
chr6 (1-59)||(24117499-24117557)
chr6 (13-59)||(31140834-31140880)
chr6 (500-557)||(2300262-2300319)
chr6 (500-569)||(7052290-7052359)
chr6 (1-58)||(18256877-18256934)
chr6 (472-557)||(2238874-2238963)
chr6 (1-59)||(14945523-14945581)
chr6 (3-57)||(15187058-15187112)
chr6 (3-57)||(15473494-15473548)
chr6 (13-58)||(331908-331953)
chr6 (13-50)||(334142-334179)
chr6 (500-557)||(1392114-1392171)
chr6 (13-58)||(7081676-7081721)
chr6 (1-58)||(16390423-16390480)
chr6 (2-59)||(25165270-25165327)
chr6 (13-54)||(28046200-28046241)
chr6 (2-58)||(13496110-13496166)
chr6 (13-53)||(14552336-14552376)
chr6 (1-53)||(20720791-20720843)
chr6 (3-59)||(31971522-31971578)
chr6 (1-53)||(33824880-33824932)
[»] scaffold0151 (2 HSPs)
scaffold0151 (472-557)||(24645-24734)
scaffold0151 (472-557)||(37162-37251)
[»] scaffold0113 (1 HSPs)
scaffold0113 (472-556)||(37770-37858)
[»] scaffold0238 (1 HSPs)
scaffold0238 (4-57)||(25384-25437)
[»] scaffold0400 (1 HSPs)
scaffold0400 (472-557)||(14693-14782)
[»] scaffold0365 (1 HSPs)
scaffold0365 (472-557)||(15336-15425)
[»] scaffold0126 (1 HSPs)
scaffold0126 (4-53)||(34901-34950)


Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 125 - 597
Target Start/End: Original strand, 45272429 - 45272923
Alignment:
Q  125 gtttgttgtgatattttgcaagaaaataacatttctataataatgttaatttatattttgaggtaaattggacaaggttgatagacattttaacatttta 224  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45272429 gtttgttgtgatgttttgcaagaaaataacatttctataataatgttaattaatattttgaggtaaattggacaaggttgatagacattttaacatttta 45272528  T
Q  225 atgtctaaattaaatttagttgaagaagaccgtttctaggatctcgagttctttgttttttgagaaataaacagtgaatttttgtgtgtacgtgtgtggc 324  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45272529 atgtctaaattaaatttagttgaagaagaccgtctctaggatctcaagttctttgttttttgagaaataaacagtgagtttttgtgtgtacgtgtgtggc 45272628  T
Q  325 cttgataaggct----ggtattacctttgtaccatgagatttcacatgatttatannnnnnnaagattttccccctctc-------------------ta 401  Q
    ||||||||||||    | ||||||||||||||||||||||| |||| |||| |||       |||||||||||||||||                   ||    
T  45272629 cttgataaggctttatgctattacctttgtaccatgagatt-cacaggattgatatttttttaagattttccccctctcttcccctctctcttaaaaata 45272727  T
Q  402 aataaataaaagagatgttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaatttgaaatcttataa 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  45272728 aataaataaaagagatgttgagaacattgtgatagagagtgaattataatcatttctttttaatgaaactttaaaattcatgaaatttgaaatcttataa 45272827  T
Q  502 atccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaatgactaaagt 597  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45272828 atccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatccaaattataaattttgatagtctttaaaaatgactaaagt 45272923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 60 - 364
Target Start/End: Original strand, 45276031 - 45276323
Alignment:
Q  60 ctaactaacttctattaactaccaattctcttaataaccactatttttcttttctaaaattgcaagtttgttgtgatattttgcaagaaaataacatttc 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  45276031 ctaactaacttctattaactaccaattctcttaataaccactatttttcttttctgaaattgcaagtttgttgtgatgttttgcaagaaaataacatttc 45276130  T
Q  160 tataataatgttaatttatattttgaggtaaattggacaaggttgatagacattttaacattttaatgtctaaattaaatttagttgaagaagaccgttt 259  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||        ||||||||||||||     || | |||||||||| | ||| |||    
T  45276131 tataataatgttaattaatattttgaggtaaattgaacaaggttgata--------aacattttaatgtc-----tacaattagttgaaggacaccattt 45276217  T
Q  260 ctaggatctcgagttctttgttttttgagaaataaacagtgaatttttgtgtgtacgtgtgtggccttgata--aggctggtattacctttgtaccatga 357  Q
    ||||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||||||| | | || |||  |||||| |||||| ||||||||||||    
T  45276218 ctaggatcttgagttctttgttttttgggaaataaacagtgagattttgtgtgtacgtgtg-gcctttaataagaggctgctattacttttgtaccatga 45276316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 403 - 597
Target Start/End: Original strand, 45278027 - 45278221
Alignment:
Q  403 ataaataaaagagatgttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaatttgaaatcttataaa 502  Q
    ||||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||||  | | ||||||||||||||| |||||||||||||||||||    
T  45278027 ataaataaaagagatgttgagaacattgtaataaagagtgaaatataatcatttcttttcgatgtaactttaaaattcatgaaatttgaaatcttataaa 45278126  T
Q  503 tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaatgactaaagt 597  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||    
T  45278127 tccataaatttttttgaaattgtttaaaatgttatgatgtaaatccattgaaatccaaattgtaaatcttgatagtctttaaaaatcactaaagt 45278221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 111 - 286
Target Start/End: Original strand, 45284003 - 45284165
Alignment:
Q  111 ttctaaaattgcaagtttgttgtgatattttgcaagaaaataacatttctataataatgttaatttatattttgaggtaaattggacaaggttgatagac 210  Q
    |||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  45284003 ttctaaaattgcaaatttgttgtgatgttttgcaagaaaacagcatttctataataatgttaattaatattttgaggtaaattggagaaggttgacagac 45284102  T
Q  211 attttaacattttaatgtctaaattaaatttagttgaagaagaccgtttctaggatctcgagttctttgttttttg 286  Q
    |||||||        |||||||| |     ||||||||| ||||| ||||||||||||||||||| || |||||||    
T  45284103 attttaa--------tgtctaaaat-----tagttgaaggagaccatttctaggatctcgagttccttattttttg 45284165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 45295363 - 45295474
Alignment:
Q  96 accactatttttcttttctaaaattgcaagtttgttgtgatattttgcaagaaaataacatttctataataatgttaatttatattttgaggtaaattgg 195  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||| | ||||||||||||||||||||||  |||||| ||||||||||     
T  45295363 accactatttttcttttctaaaactggcagtttgttgtgatgttttgcaagaaaacagcatttctataataatgttaattggtattttaaggtaaattga 45295462  T
Q  196 acaaggttgata 207  Q
    || |||||||||    
T  45295463 acgaggttgata 45295474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 45304323 - 45304434
Alignment:
Q  96 accactatttttcttttctaaaattgcaagtttgttgtgatattttgcaagaaaataacatttctataataatgttaatttatattttgaggtaaattgg 195  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||| | ||||||||||||||||||||||  |||||| ||||||||||     
T  45304323 accactatttttcttttctaaaactggcagtttgttgtgatgttttgcaagaaaacagcatttctataataatgttaattggtattttaaggtaaattga 45304422  T
Q  196 acaaggttgata 207  Q
    || |||||||||    
T  45304423 acgaggttgata 45304434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 417 - 588
Target Start/End: Complemental strand, 3796971 - 3796796
Alignment:
Q  417 tgttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaa-ttcataaaat---ttgaaatcttataaatccataaaat 512  Q
    ||||||||| ||| |  |||||||||  |||||||||||| ||||  ||||  |||||||| ||||||||||   |||||||||||||||||||||||||    
T  3796971 tgttgagaatattattgtagagagtgtgttgtaatcattttttttcgacgattctttaaaaattcataaaatcttttgaaatcttataaatccataaaat 3796872  T
Q  513 cttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    | ||| ||||| ||||||||  | ||||||||||||||||||||| ||||| |||||  ||||||||||| |||||    
T  3796871 catttcaaattctttaaaattatctgatgtaaatccattgaaatccaaattgtaaatcctgatagtcttttaaaat 3796796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 569
Target Start/End: Original strand, 10617220 - 10617361
Alignment:
Q  431 tgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaatccataaaatcttttgaaattgttt 527  Q
    ||||||||||||  |||||||||||||||||||| ||  | |||||||||||||| |   ||||||| |||||||||||||||||| ||| ||||  |||    
T  10617220 tgatagagagtgtgttgtaatcatttctttttaatgagtccttaaaattcataaactcttttgaaattttataaatccataaaatcatttcaaatccttt 10617319  T
Q  528 aaaatcttatgatgtaaatccattgaaatctaaattataaat 569  Q
    ||||| |||||||||||||||||||||||  ||||| |||||    
T  10617320 aaaattttatgatgtaaatccattgaaattcaaattgtaaat 10617361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 451 - 569
Target Start/End: Original strand, 19251890 - 19252011
Alignment:
Q  451 tcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatc 547  Q
    |||||||||||||| ||  | ||||||||||||||||   |||||||||||||||| ||||||||| ||| | ||  |||||||||||||||||||||||    
T  19251890 tcatttctttttaaagagtccttaaaattcataaaatcttttgaaatcttataaattcataaaatcatttcacatcctttaaaatcttatgatgtaaatc 19251989  T
Q  548 cattgaaatctaaattataaat 569  Q
    |||||||||| ||||| |||||    
T  19251990 cattgaaatccaaattgtaaat 19252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 419 - 588
Target Start/End: Original strand, 10068787 - 10068960
Alignment:
Q  419 ttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaa-aattcataaaat---ttgaaatcttataaatccataaaatct 514  Q
    ||||||| ||| ||||| ||||||  || |||| ||||||||| |||||   ||||| ||||||||||||   |||||||||||||||| ||||| |||     
T  10068787 ttgagaatattatgataaagagtgtgttctaataatttcttttcaacgagtttttaagaattcataaaatcttttgaaatcttataaattcataatatca 10068886  T
Q  515 tttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    |||  |||  ||||||||||| ||||||||||||||||||||| ||||| || ||  ||||||||||| |||||    
T  10068887 tttccaatcctttaaaatcttgtgatgtaaatccattgaaatccaaattgtagatcctgatagtcttttaaaat 10068960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 45272347 - 45272418
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggacactaactaacttctattaa 77  Q
    |||||| |||||| || ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  45272347 accttacatatatcatacattgtccttatcagctgagttaaactcacggggacactaactaacttctattaa 45272418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 586
Target Start/End: Original strand, 43863686 - 43863784
Alignment:
Q  487 tttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaa 586  Q
    |||||||||||||||||||||||||| |||  ||||  | |||||||||| || ||||||| ||||||||||||||| ||||| ||||||||| ||||||    
T  43863686 tttgaaatcttataaatccataaaatgtttc-aaatgttataaaatcttacgaagtaaatcaattgaaatctaaattttaaatcttgatagtcattaaaa 43863784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 38911338 - 38911292
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  38911338 atatattatacattgtctttatcaactgagttaagctcacggggaca 38911292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 558
Target Start/End: Complemental strand, 40996331 - 40996241
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||||||||||    
T  40996331 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatct 40996241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 977266 - 977355
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  977266 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 977355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 34695763 - 34695852
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  34695763 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 34695852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 41860275 - 41860326
Alignment:
Q  8 cttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| ||||||||||||||||||||||||  | |||||||||||||||||||    
T  41860275 cttatatatattatgcattgtctttatcaattaagttaagctcacggggaca 41860326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 43392227 - 43392138
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  43392227 ttaaaattcataaaatctattgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 43392138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 44343201 - 44343114
Alignment:
Q  472 ttaaaattcataaaattt-gaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||||| |||||||  | |||||||||||||  ||| ||||  |||||||||||||||  ||||||||||||||||    
T  44343201 ttaaaattcataaaattttgaaatctcttgaaatccataaaattatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 44343114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 444 - 557
Target Start/End: Complemental strand, 44623089 - 44622972
Alignment:
Q  444 attgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatga 539  Q
    |||||||||||||||||  || ||| | ||||||||||| ||||   ||||||||||||||| | |||| |||||||| ||||  |||||||||||| ||    
T  44623089 attgtaatcatttctttccaatgaatccttaaaattcattaaatcttttgaaatcttataaaattcatacaatcttttcaaatcctttaaaatcttacga 44622990  T
Q  540 tgtaaatccattgaaatc 557  Q
    || || ||| ||||||||    
T  44622989 tgcaagtccgttgaaatc 44622972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34000313 - 34000255
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| |||||| |||||||||||||| || |||||| ||||||||||||||||| ||||    
T  34000313 cccgaaccttacatatattatgcattatccttatcaactgagttaagctcacggagaca 34000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 7718039 - 7717982
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  7718039 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 7717982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 7718970 - 7718913
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  7718970 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 7718913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 18916614 - 18916557
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  18916614 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 18916557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 34009490 - 34009547
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  34009490 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 34009547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 34934463 - 34934516
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||| |||||||||||||||||| || ||||||||||||||| ||| ||||    
T  34934463 gaccttatatatattatgcattgtctataccagctgagttaagctaacgaggac 34934516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 43580785 - 43580728
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  43580785 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 43580728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 48527240 - 48527188
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    |||||||||  ||||||||||||||||| |||||| ||||| |||||||||||    
T  48527240 ccggaccttgcatatattatgcattgtccttatcaactgagataagctcacgg 48527188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 8227397 - 8227342
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| ||| ||||||||||||||||| |||||| ||||| ||| ||||||||||||    
T  8227397 ggactttacatatattatgcattgtccttatcaactgagctaaactcacggggaca 8227342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 39219084 - 39218995
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||||| |  ||||||||||||||||    
T  39219084 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttattaattaaatccattgaaatc 39218995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 46551869 - 46551912
Alignment:
Q  14 tatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||    
T  46551869 tatattatgcattgtccttatcaactgagttaaactcacgggga 46551912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2618730 - 2618672
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  ||||||||||||||||| ||| || |||||  |||||||||||||||    
T  2618730 cccggaccttgcatatattatgcattgtccttaccaactgagcgaagctcacggggaca 2618672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20103464 - 20103522
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  | ||||||||||||||| ||| || ||||||||||||||||| ||||    
T  20103464 cccggaccttgtaaatattatgcattgtccttaccaactgagttaagctcacggagaca 20103522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 557
Target Start/End: Complemental strand, 20275090 - 20275002
Alignment:
Q  473 taaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||| |||  ||||||||||||||||    
T  20275090 taaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttttgaattaaatccattgaaatc 20275002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 23221438 - 23221392
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    |||||| |||||||||||||||||| || || |||||||||||||||    
T  23221438 accttacatatattatgcattgtctctaccaactgagttaagctcac 23221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 24839535 - 24839481
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||| |||| ||||||||||||| || || |||||||||||||||| |||||    
T  24839535 gaccttacatattttatgcattgtctataccaactgagttaagctcacgaggaca 24839481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27545008 - 27544950
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  ||||||||| ||||||| ||| || ||||| ||||||||||||||||    
T  27545008 cccggaccttgcatatattatacattgtccttaccaactgagataagctcacggggaca 27544950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 32228486 - 32228432
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||| |||||    
T  32228486 gaccttacatatattatgctttgtccataccagctgagttaagctcacgaggaca 32228432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 529 - 563
Target Start/End: Complemental strand, 43187097 - 43187063
Alignment:
Q  529 aaatcttatgatgtaaatccattgaaatctaaatt 563  Q
    ||||||||||||||||||||||||||||| |||||    
T  43187097 aaatcttatgatgtaaatccattgaaatccaaatt 43187063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 15015287 - 15015242
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctca 51  Q
    |||||| ||||||||||||||||  |||||| ||||||||||||||    
T  15015287 accttacatatattatgcattgttcttatcaactgagttaagctca 15015242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 25251556 - 25251503
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||| |||||||||||||||| | || || ||||||||||||||||| ||||    
T  25251556 accttatatatattatgcattgtttataccaactgagttaagctcacggagaca 25251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 28187607 - 28187562
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctca 51  Q
    ||||||||||||||||| ||||||| || || ||||||||||||||    
T  28187607 accttaaatatattatgtattgtctctaccaactgagttaagctca 28187562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 30441635 - 30441692
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||| ||||||||    
T  30441635 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatcccttgaaatc 30441692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 31401860 - 31401917
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  ||||||||| |||||  ||||||||||||||||    
T  31401860 aaatccataaaatcatttcaaatcctttaaaatcatatgaattaaatccattgaaatc 31401917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 36803880 - 36803831
Alignment:
Q  10 taaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||||||| || || ||||| |||||||||| |||||    
T  36803880 taaatatattatgcattgtctctaccaactgagctaagctcacgaggaca 36803831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 37451251 - 37451304
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||| |||||||||||||| || |||||| ||||| ||| |||||||||||    
T  37451251 gaccttacatatattatgcattatccttatcaactgagctaaactcacggggac 37451304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 42043078 - 42043127
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    |||||||||||||||||||||||||||  || || ||||| |||||||||    
T  42043078 cggaccttaaatatattatgcattgtccataccaactgagctaagctcac 42043127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 45425492 - 45425459
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaa 46  Q
    |||||||||||||||||||||||| |||||||||    
T  45425492 atatattatgcattgtctttatcaactgagttaa 45425459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 48007569 - 48007610
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    ||||||||||||||||| ||| || |||||||||||||||||    
T  48007569 atatattatgcattgtcattaccaactgagttaagctcacgg 48007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 964753 - 964809
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| |||| |||||||||||||||| | ||||  |||||||||||||||| |||||    
T  964753 cggatcttatatatattatgcattgtttctatcgactgagttaagctcacgaggaca 964809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 3948093 - 3948053
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||||||||||| ||||| ||||||||| ||||||    
T  3948093 atatattatgcattgtctctatcaactgagttaaactcacg 3948053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 8879769 - 8879809
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||||||||||| || || ||||||||||||||||    
T  8879769 atatattatgcattgtctataccaactgagttaagctcacg 8879809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 19684227 - 19684267
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaa 46  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  19684227 accttacatatattatgcattgtctatatcaactgagttaa 19684267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 25246810 - 25246770
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||||||||||||||||| ||||| ||| ||||||    
T  25246810 atatattatgcattgtctttatcaactgagctaaactcacg 25246770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 27263380 - 27263332
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    |||||||||||||||||  || || |||||||||| |||||||||||||    
T  27263380 atatattatgcattgtccataccaactgagttaagttcacggggacact 27263332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 27270274 - 27270226
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    |||||||||||||||||  || || |||||||||| |||||||||||||    
T  27270274 atatattatgcattgtccataccaactgagttaagttcacggggacact 27270226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 28012636 - 28012676
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||||||||| ||| || ||||||||||||||||    
T  28012636 atatattatgcattgtccttaccaactgagttaagctcacg 28012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 35001145 - 35001189
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctc 50  Q
    ||||||||||||||||||||||||| || ||  ||||||||||||    
T  35001145 accttaaatatattatgcattgtctctaccaaatgagttaagctc 35001189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 35142171 - 35142219
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    |||||||||||||||||  ||||| ||||| |||||||||| |||||||    
T  35142171 atatattatgcattgtccatatcaactgagctaagctcacgaggacact 35142219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39280828 - 39280888
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    ||||||||||  ||||||||||||||||  ||| || ||||| |||| |||||||||||||    
T  39280828 cccggaccttgcatatattatgcattgttcttaccaactgagctaagttcacggggacact 39280888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 39926560 - 39926600
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  39926560 atatattatgcattgtccttatcaactgagctaagctcacg 39926600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 42829256 - 42829304
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    |||||||||||||||||  ||||| |||||| ||||||||| |||||||    
T  42829256 atatattatgcattgtccctatcaactgagtcaagctcacgaggacact 42829304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 8e-35; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 446 - 588
Target Start/End: Complemental strand, 9577334 - 9577189
Alignment:
Q  446 tgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgt 542  Q
    |||||||||||| ||| |||||  ||||||||||||||||||   |||||||||||||||||||||||||| ||| ||||  ||||||||||||| ||||    
T  9577334 tgtaatcatttcatttcaacgagtctttaaaattcataaaatattttgaaatcttataaatccataaaatcattttaaatcctttaaaatcttataatgt 9577235  T
Q  543 aaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||||||||| |||||||||||  ||| ||||||| |||||    
T  9577234 aaatccattgaaatccaaattataaatcctgaaagtcttttaaaat 9577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 448 - 557
Target Start/End: Original strand, 47784679 - 47784792
Alignment:
Q  448 taatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgta 543  Q
    |||||||||||| | || ||| | ||||||||||||||||   ||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| ||    
T  47784679 taatcatttcttctcaatgaatcattaaaattcataaaatcttttgaaatcttataaaatccataaaatcatttcaaattctttaaaatcttatgatcta 47784778  T
Q  544 aatccattgaaatc 557  Q
    ||||||||||||||    
T  47784779 aatccattgaaatc 47784792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 588
Target Start/End: Original strand, 26284216 - 26284318
Alignment:
Q  486 atttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaa 585  Q
    ||||||||||||||||||||||||| || ||  ||||  |||||||||| ||||| ||||||  |||||||| ||||||||| |||||||||||||| ||    
T  26284216 atttgaaatcttataaatccataaagtcattccaaatcttttaaaatctcatgatataaatcatttgaaatccaaattataagttttgatagtcttttaa 26284315  T
Q  586 aat 588  Q
    |||    
T  26284316 aat 26284318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 487 - 582
Target Start/End: Complemental strand, 46601594 - 46601496
Alignment:
Q  487 tttgaaatcttata---aatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtcttt 582  Q
    ||||||||||||||   ||| ||||||||| ||| ||||  |||||||| |||||| ||||||||||||||||| |||||||||||  | |||||||||    
T  46601594 tttgaaatcttatagtaaattcataaaatcatttcaaatcctttaaaattttatgacgtaaatccattgaaatccaaattataaatcctaatagtcttt 46601496  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 557
Target Start/End: Original strand, 730578 - 730668
Alignment:
Q  471 tttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  730578 tttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 730668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 557
Target Start/End: Complemental strand, 6303978 - 6303888
Alignment:
Q  471 tttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  6303978 tttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 6303888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 45536494 - 45536583
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatct-tataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   ||||||||| | |||||||| |||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  45536494 ttaaaattcataaaatctgttgaaatctctttaaatccagaaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 45536583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 472 - 556
Target Start/End: Complemental strand, 47654040 - 47653952
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaat 556  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||||||||    
T  47654040 ttaaaattcataaaatctattgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaat 47653952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 9639828 - 9639885
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||  ||||||||||||||||| ||| ||  |||||||||||||||||||||    
T  9639828 ccggaccttgcatatattatgcattgtccttaccaagtgagttaagctcacggggaca 9639885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 10480761 - 10480708
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||| ||||||||||||||||| ||| || |||||||||||||||| ||||    
T  10480761 gaccttacatatattatgcattgtccttaccatctgagttaagctcacgaggac 10480708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 558
Target Start/End: Complemental strand, 31572047 - 31571956
Alignment:
Q  471 tttaaaattcataaaatttg---aaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    ||||||||||||||||||||   ||||||| | |||||||||||||| ||| ||||  ||||||||||||  |  |||||||||||||||||    
T  31572047 tttaaaattcataaaatttgtggaaatcttttgaaatccataaaatcatttcaaatcctttaaaatcttactaattaaatccattgaaatct 31571956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36371050 - 36371107
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||| |||||||||||||||||| || || ||||| |||||||||| ||||    
T  36371050 cccggaccttacatatattatgcattgtctctaccaactgagctaagctcacgaggac 36371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38448876 - 38448933
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||  ||||||||||||||||| ||| || ||||| |||||||||||||||    
T  38448876 cccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacggggac 38448933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 41599883 - 41599822
Alignment:
Q  486 atttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatc 547  Q
    |||||||||||||||||||||||||||| ||| ||||  || ||||||| ||||| ||||||    
T  41599883 atttgaaatcttataaatccataaaatcatttcaaatccttcaaaatctcatgatataaatc 41599822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 49418504 - 49418561
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  49418504 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 49418561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3693810 - 3693866
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    ||||||| ||||||||||| |||||| ||||| ||||| |||||||||| |||||||    
T  3693810 gaccttacatatattatgctttgtctatatcaactgagctaagctcacgaggacact 3693866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 5533919 - 5533879
Alignment:
Q  18 ttatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  5533919 ttatgcattgtctttatcagctgagctaagctcacgaggac 5533879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 10292981 - 10292929
Alignment:
Q  7 ccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||| |||||||||||||||||  ||||| ||||||||||||||||| ||||    
T  10292981 ccttacatatattatgcattgtccctatcaactgagttaagctcacggagaca 10292929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 17396754 - 17396702
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||| |||||||||||||||||| || ||| ||||| |||||||||||||||    
T  17396754 accttgaatatattatgcattgtccttgtcaactgagctaagctcacggggac 17396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 557
Target Start/End: Original strand, 21222655 - 21222745
Alignment:
Q  471 tttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||||| |  ||||||||||||||||    
T  21222655 tttaaaattcataaaatatgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttattaattaaatccattgaaatc 21222745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 588
Target Start/End: Complemental strand, 31622449 - 31622361
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    |||| ||||||||| ||| |||||  ||||||||||||||  |||||| ||||||||| ||||| ||||| |  ||||||||| |||||    
T  31622449 aaattcataaaatcatttcaaattcattaaaatcttatgagttaaatctattgaaatccaaattgtaaatctgaatagtcttttaaaat 31622361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 581
Target Start/End: Complemental strand, 44289233 - 44289193
Alignment:
Q  541 gtaaatccattgaaatctaaattataaattttgatagtctt 581  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  44289233 gtaaatccattgaaatccaaattgtaaattttgatagtctt 44289193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 15729469 - 15729422
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    |||||||||||||||||| || || |||||||||||||||| ||||||    
T  15729469 atatattatgcattgtctctaccaactgagttaagctcacgaggacac 15729422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 31401665 - 31401720
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||  |||||||||||||||| ||| ||| ||||||||| |||||||||||    
T  31401665 cggaccttgcatatattatgcattgtttttgtcaactgagttaaactcacggggac 31401720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 39096853 - 39096908
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| ||| |||||||||| |||||| |||||||||||||||| ||||| ||||||    
T  39096853 ggactttatatatattatgaattgtccttatcagctgagttaaactcacagggaca 39096908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41926873 - 41926822
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    ||||||||||| ||||||||||||||||| ||| || ||||| |||||||||    
T  41926873 cccggaccttacatatattatgcattgtccttaccaactgagctaagctcac 41926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 49197963 - 49197874
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||| |||||||||    
T  49197963 ttaaaattcataaaatatgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatctattgaaatc 49197874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 50849088 - 50849135
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||| ||||||||||||||||| ||| || ||||||||||||||||    
T  50849088 accttacatatattatgcattgtcattaccaactgagttaagctcacg 50849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 7484716 - 7484762
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||||||||||| || |||||||| |||||||||| |||||    
T  7484716 atatattatgcattgtctctaccagctgagctaagctcacgaggaca 7484762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 10654459 - 10654509
Alignment:
Q  3 cggaccttaaatatattatgcattgtc-tttatcagctgagttaagctcac 52  Q
    ||||||||  ||||||||||||||||| ||||||| |||||||||||||||    
T  10654459 cggaccttgcatatattatgcattgtcttttatcaactgagttaagctcac 10654509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10841946 - 10841900
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    |||||| |||||||||||||||||  ||||| |||||||||||||||    
T  10841946 accttatatatattatgcattgtccatatcaactgagttaagctcac 10841900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19620627 - 19620569
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  |||||||||| |||||| ||| || ||||| ||||||||||||||||    
T  19620627 cccggaccttgcatatattatgtattgtccttaccaactgagctaagctcacggggaca 19620569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23397333 - 23397391
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  |||| |||||||||||| |||  | ||||||||||||||||||||||    
T  23397333 cccggaccttgcatatgttatgcattgtcattactaactgagttaagctcacggggaca 23397391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 32950772 - 32950830
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    |||||||||  |||||||||||||||| | || || |||||||||||||||| ||||||    
T  32950772 ccggaccttgcatatattatgcattgtttataccaactgagttaagctcacgtggacac 32950830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 11242000 - 11242049
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    |||||| |||||||||||||||||| | ||| ||||||||| ||||||||    
T  11242000 accttacatatattatgcattgtctctgtcaactgagttaaactcacggg 11242049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17139527 - 17139584
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||| ||||||||||||||||||  || || ||||| |||||||||| ||||    
T  17139527 cccggaccttgaatatattatgcattgtccctaccaactgagctaagctcacgaggac 17139584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 18056738 - 18056783
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| ||| || |||||||||||| ||||||||    
T  18056738 atatattatgcattgtccttaccaactgagttaagcttacggggac 18056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 19451451 - 19451394
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  ||||||||||| |||  ||||||||||||||||    
T  19451451 aaatccataaaatcatttcaaatcctttaaaatcttttgaattaaatccattgaaatc 19451394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 24324422 - 24324467
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  24324422 atatattatgcattgtccttatcacctgagctaagctcacgaggac 24324467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 27199018 - 27199079
Alignment:
Q  527 taaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||| |||| ||||||| |||||||| ||||||  ||| |||||||||||| |||||    
T  27199018 taaaatcttgtgatataaatcctttgaaatccaaattaccaatcttgatagtcttttaaaat 27199079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 30678828 - 30678881
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||| |||||||||||||||||  || || |||||||||||||||| |||||    
T  30678828 accttacatatattatgcattgtccctaccaactgagttaagctcacgaggaca 30678881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 33153892 - 33153941
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    ||||||||| |||||||||||||||||  || || |||||||||||||||    
T  33153892 cggaccttacatatattatgcattgtccctaccaactgagttaagctcac 33153941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 39492370 - 39492321
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    ||||||||| |||||||||||||||||||||| |  |||||||| |||||    
T  39492370 cggaccttacatatattatgcattgtctttattaattgagttaaactcac 39492321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45481544 - 45481487
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||  ||||||||||||||||| ||| ||  ||| ||||||||||||||||    
T  45481544 cccggaccttgcatatattatgcattgtccttaccaaatgaattaagctcacggggac 45481487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 47528470 - 47528515
Alignment:
Q  14 tatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||||||||| ||| || ||||| ||||||||||||||||    
T  47528470 tatattatgcattgtccttaccaactgagctaagctcacggggaca 47528515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 47781182 - 47781239
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||| ||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  47781182 aaatccttaaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 47781239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 49875612 - 49875661
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||  ||||||||||||||||| ||| || ||||||||||||||||    
T  49875612 ggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 49875661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 50192241 - 50192184
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  ||| |||||||||||  ||||||||||||||||    
T  50192241 aaatccataaaatcatttcaaatccttttaaatcttatgaattaaatccattgaaatc 50192184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 52441522 - 52441579
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||  |||||||||||||||||| || || ||||| |||||||||| |||||    
T  52441522 ccggaccttgcatatattatgcattgtctataccaactgagctaagctcacgaggaca 52441579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 6000155 - 6000211
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||  ||||||||||||||||| | | || ||||||||| ||||||||||||    
T  6000155 cggaccttgcatatattatgcattgtcctaaccaactgagttaaactcacggggaca 6000211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 16033472 - 16033520
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    |||||||||||||||||  ||||| |||||| ||||||||| |||||||    
T  16033472 atatattatgcattgtccctatcaactgagtcaagctcacgaggacact 16033520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 557
Target Start/End: Complemental strand, 37014437 - 37014405
Alignment:
Q  525 tttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||||||||||| ||||||||    
T  37014437 tttaaaatcttatgatgtaaatccgttgaaatc 37014405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 41677600 - 41677656
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    |||||| |||| |||||||||| |||||| ||| || ||||| ||||||||||||||    
T  41677600 cccggatcttacatatattatgtattgtccttaccaactgagctaagctcacgggga 41677656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 472 - 554
Target Start/End: Complemental strand, 45759660 - 45759574
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaa 554  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||| |||||||    
T  45759660 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaattcattgaa 45759574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 500 - 556
Target Start/End: Original strand, 48525018 - 48525074
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaat 556  Q
    |||||||||||||| ||| ||||  |||||||||||||||  |||||| ||||||||    
T  48525018 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatctattgaaat 48525074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 471 - 588
Target Start/End: Original strand, 12105133 - 12105253
Alignment:
Q  471 tttaaaattcataaaat---ttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataa 567  Q
    |||||||||||||||||   |||||||||||| ||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||| |||||  ||    
T  12105133 tttaaaattcataaaatcttttgaaatcttatgaatccataaaatccttttaaattctttaaaatattatgatgtaaatccattgaaatccaaattgaaa 12105232  T
Q  568 attttgatagtctttaaaaat 588  Q
    ||||||||||||||| |||||    
T  12105233 attttgatagtcttttaaaat 12105253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 419 - 588
Target Start/End: Original strand, 6976029 - 6976201
Alignment:
Q  419 ttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaatccataaaatctt 515  Q
    ||||||| ||| |||||||| |||  ||||||| ||||| ||| ||  || | ||||||||||||||||   ||||||| |||||||| || |||||| |    
T  6976029 ttgagaatattatgatagagggtgtgttgtaattatttcatttcaataaatccttaaaattcataaaatcttttgaaattttataaattcacaaaatcat 6976128  T
Q  516 ttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    || ||||  ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||    
T  6976129 ttcaaatcctttaaaatcttatgatgtaaatccattgaaatccaaattgtaaatcttgatagtcttttaaaat 6976201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 12103938 - 12104059
Alignment:
Q  470 ctttaaaattcataaaat---ttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattata 566  Q
    |||||||||| |||||||   |||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||  |    
T  12103938 ctttaaaattgataaaatcttttgaaatcttataaatccataaaatcttttaaaatcctttaaaatcttatgatgtaaatccattgaaatccaaattgaa 12104037  T
Q  567 aattttgatagtctttaaaaat 588  Q
    |||   |||||||||| |||||    
T  12104038 aatcccgatagtcttttaaaat 12104059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 23535837 - 23535717
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataa 567  Q
    ||||||||||||||||   ||||||||||||||| | ||||||||| ||| ||||  |||||||||||||  |||||||||||||||||| ||||| |||    
T  23535837 ttaaaattcataaaatcttttgaaatcttataaaattcataaaatcatttcaaatcctttaaaatcttatagtgtaaatccattgaaatccaaattgtaa 23535738  T
Q  568 attttgatagtctttaaaaat 588  Q
    || |||||||| ||| |||||    
T  23535737 atcttgatagttttttaaaat 23535717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 491 - 588
Target Start/End: Complemental strand, 6034872 - 6034775
Alignment:
Q  491 aaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||||||||||||||||  ||| ||||  |||||||||| |||||||| ||||||||||||| |||||  |||| |||||||||||| |||||    
T  6034872 aaatcttataaatccataaaattatttcaaatcctttaaaatctcatgatgtatatccattgaaatccaaatttaaaatcttgatagtcttttaaaat 6034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 470 - 556
Target Start/End: Original strand, 5825889 - 5825978
Alignment:
Q  470 ctttaaaattcataaaat---ttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaat 556  Q
    ||||||||||||||||||   |||||||||||||||| ||||||||| ||| ||||  |||||||| |||||||||||||| ||||||||    
T  5825889 ctttaaaattcataaaatcttttgaaatcttataaattcataaaatcgttttaaatcctttaaaattttatgatgtaaatctattgaaat 5825978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 422 - 522
Target Start/End: Complemental strand, 15492657 - 15492554
Alignment:
Q  422 agaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaa---tttgaaatcttataaatccataaaatcttttg 518  Q
    |||| ||| ||||||||||||  ||||||||||||||||| || ||  | |||||||||||||||   ||||||||| |||||||||||||||||||||     
T  15492657 agaatattatgatagagagtgtgttgtaatcatttcttttcaatgagtccttaaaattcataaaatcttttgaaatcatataaatccataaaatctttta 15492558  T
Q  519 aaat 522  Q
    ||||    
T  15492557 aaat 15492554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 495 - 557
Target Start/End: Original strand, 38772460 - 38772522
Alignment:
Q  495 cttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||||  ||| ||||  |||||||||||||||||||||||||||||||||    
T  38772460 cttataaatccataaaattatttcaaatcctttaaaatcttatgatgtaaatccattgaaatc 38772522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 525 - 588
Target Start/End: Complemental strand, 50899409 - 50899346
Alignment:
Q  525 tttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    |||||||||||||||||||||| |||||||||| |||||  ||||| ||||||||||| |||||    
T  50899409 tttaaaatcttatgatgtaaattcattgaaatccaaattgaaaattctgatagtcttttaaaat 50899346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 54625981 - 54626070
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatct-tataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   ||||||||| | ||||||| ||||||| ||| ||||| |||||||||||||||  ||||||||||||||||    
T  54625981 ttaaaattcataaaatctgttgaaatctctttaaatccttaaaatcatttcaaattctttaaaatcttatgaattaaatccattgaaatc 54626070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 22462351 - 22462305
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  22462351 atatattatgcattgtccttatcaactgagttaagctcacggggaca 22462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 20498702 - 20498791
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  20498702 ttaaaattcataaaatcagttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 20498791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 33807365 - 33807276
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  33807365 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 33807276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 588
Target Start/End: Original strand, 7318979 - 7319081
Alignment:
Q  487 tttgaaatctt-ataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaa 585  Q
    ||||||||||| ||||||||||||| || | | ||||  | | |||||||||||||||||||| || |||||| ||||| |||| || ||||||||| ||    
T  7318979 tttgaaatctttataaatccataaagtcatctcaaatcctatgaaatcttatgatgtaaatcctttaaaatctcaattacaaatcttaatagtcttttaa 7319078  T
Q  586 aat 588  Q
    |||    
T  7319079 aat 7319081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 17588401 - 17588355
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||    
T  17588401 atatattatgcattgtccttaccaactgagttaagctcacggggaca 17588355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 588
Target Start/End: Original strand, 45135598 - 45135700
Alignment:
Q  487 tttgaaatctt-ataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaa 585  Q
    ||||||||||| ||||||||||||| || | | ||||  | | |||||||||||||||||||| || |||||| ||||| |||| || ||||||||| ||    
T  45135598 tttgaaatctttataaatccataaagtcatctcaaatcctatgaaatcttatgatgtaaatcctttaaaatctcaattacaaatcttaatagtcttttaa 45135697  T
Q  586 aat 588  Q
    |||    
T  45135698 aat 45135700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 47039466 - 47039424
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  47039466 atatattatgcattgtccttatcatctgagttaagctcacggg 47039424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 53633627 - 53633685
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||| |||||||||||||| || ||| || |||||||||||||||| |||||    
T  53633627 cccggaccttacatatattatgcattatccttaccaactgagttaagctcacgaggaca 53633685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 995653 - 995596
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  995653 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 995596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 2563975 - 2563922
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||| ||||||||| |||| | ||||||| ||||||||||||||||||||||    
T  2563975 accttacatatattattcattatttttatcaactgagttaagctcacggggaca 2563922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 3205687 - 3205630
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  3205687 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 3205630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7464501 - 7464558
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||| |||||||||||||||||  || || |||||||||||||||| ||||    
T  7464501 cccggaccttacatatattatgcattgtccctaccaactgagttaagctcacgaggac 7464558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 25418893 - 25418950
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  25418893 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 25418950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 52080484 - 52080541
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  52080484 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 52080541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 51882222 - 51882270
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    |||||||||||||||||  || || ||||||||||||||||||||||||    
T  51882222 atatattatgcattgtccataccaactgagttaagctcacggggacact 51882270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 16008291 - 16008202
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||| |||  ||||||||||||||||    
T  16008291 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttgtgaattaaatccattgaaatc 16008202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 33996192 - 33996103
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||| ||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  33996192 ttaaaattcataaaatctgttgaaatctcttgaaatacataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 33996103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 35338176 - 35338265
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||||| |  ||||||||||||||||    
T  35338176 ttaaaattcataaaatctattgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttataaattaaatccattgaaatc 35338265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 37437007 - 37436952
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||||||||||| |||||| |||||||  ||||||||| ||||| |||||    
T  37437007 ggaccttaaatatattatacattgtttttatcaagtgagttaagttcacgaggaca 37436952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 51699250 - 51699161
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||||| |  ||||||||||||||||    
T  51699250 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttattaattaaatccattgaaatc 51699161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 7827555 - 7827501
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||| |||||||||||||||||  ||||| ||||||||| |||||| |||||    
T  7827555 gaccttacatatattatgcattgtccatatcaactgagttaaactcacgaggaca 7827501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 7829943 - 7829889
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||| |||||||||||||||||  ||||| ||||||||| |||||| |||||    
T  7829943 gaccttacatatattatgcattgtccatatcaactgagttaaactcacgaggaca 7829889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 39842318 - 39842267
Alignment:
Q  466 gaaactttaaaattcataaaa----tttgaaatcttataaatccataaaatc 513  Q
    ||||| |||||||||||||||    |||||||||||||||||||||||||||    
T  39842318 gaaaccttaaaattcataaaaatcttttgaaatcttataaatccataaaatc 39842267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 46469324 - 46469274
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    |||||| |||||||||||||||||| ||| || ||||| ||||||||||||    
T  46469324 gaccttgaatatattatgcattgtccttaccaactgagctaagctcacggg 46469274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 10138894 - 10138837
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||| ||||||||||  ||||||||||||||||    
T  10138894 aaatccataaaatcatttcaaatcctttataatcttatgaattaaatccattgaaatc 10138837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 19254412 - 19254469
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||| ||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  19254412 aaattcataaaatcatttcaaatcatttaaaatcttatgaattaaatccattgaaatc 19254469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 21914093 - 21914138
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| ||| || |||||||||||||| ||||||    
T  21914093 atatattatgcattgtccttaccaactgagttaagctcatggggac 21914138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 29448605 - 29448548
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||| ||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  29448605 aaattcataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 29448548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 33633329 - 33633386
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||| |||| |||||||||||||||||| ||  | |||||||||||||||| |||||    
T  33633329 ccggatcttacatatattatgcattgtctatactaactgagttaagctcacgaggaca 33633386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7651237 - 7651185
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||| |||||| ||||| |||||||||||  ||||| ||||||||||||||||    
T  7651237 cccgaaccttatatatactatgcattgtccctatcaactgagttaagctcacg 7651185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 11574292 - 11574252
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||||||| || |||||| ||||||||||||||||    
T  11574292 atatattatgcattatccttatcaactgagttaagctcacg 11574252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 32753867 - 32753819
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    |||||||||||||||||  ||||| |||||| ||||||||| |||||||    
T  32753867 atatattatgcattgtccctatcaactgagtcaagctcacgaggacact 32753819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 43334534 - 43334574
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||||| ||| ||| |||||||||||||||||||    
T  43334534 atatattatgcatggtccttaccagctgagttaagctcacg 43334574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 47377371 - 47377411
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||||||||| ||| || ||||||||||||||||    
T  47377371 atatattatgcattgtccttaccaactgagttaagctcacg 47377411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 48376881 - 48376829
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||| |||||||||||||| |||||| || ||||| |||||||||| ||||    
T  48376881 accttacatatattatgcattatctttaccaactgagctaagctcacgaggac 48376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 419 - 557
Target Start/End: Original strand, 8712199 - 8712340
Alignment:
Q  419 ttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaatccataaaatctt 515  Q
    ||||||| ||| ||||||||||||  ||||||| ||||||||| || ||  | |||||||| |||||||   ||||||||||||||||| |||||||| |    
T  8712199 ttgagaatattatgatagagagtgtgttgtaataatttcttttcaatgagtccttaaaattaataaaatattttgaaatcttataaatcgataaaatcat 8712298  T
Q  516 ttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    || ||||  |||||||||||||||||||||||||||||||||    
T  8712299 ttcaaatcctttaaaatcttatgatgtaaatccattgaaatc 8712340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 487 - 559
Target Start/End: Original strand, 26340483 - 26340556
Alignment:
Q  487 tttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatcta 559  Q
    |||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||||    
T  26340483 tttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatcta 26340556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 419 - 588
Target Start/End: Original strand, 9163510 - 9163681
Alignment:
Q  419 ttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaa-tccataaaatct 514  Q
    ||||||| ||||||| | ||||||  || |||||||||  |||||| ||| |||||||||| |||||||   ||||||||||||||| | || ||||||     
T  9163510 ttgagaatattgtgaaaaagagtgtgttataatcattt--ttttaatgaatctttaaaatttataaaatcttttgaaatcttataaaattcagaaaatcg 9163607  T
Q  515 tttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||| ||||   ||||||||||||| | |||||||||||||||| ||||| ||||| |||||| ||||| |||||    
T  9163608 tttcaaatctcttaaaatcttatggtataaatccattgaaatccaaattgtaaatcttgatattcttttaaaat 9163681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 500 - 588
Target Start/End: Original strand, 11090684 - 11090772
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||| |||||||| ||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||  || ||||||||| |||||    
T  11090684 aaatctataaaatcattttaaatcctttaaaatcttatgatgtaaatccattgaaatccaaattataaaacttcatagtcttttaaaat 11090772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 42721869 - 42721940
Alignment:
Q  487 tttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||    
T  42721869 tttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatc 42721940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 45341510 - 45341581
Alignment:
Q  487 tttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||    
T  45341510 tttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatc 45341581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 588
Target Start/End: Original strand, 20021787 - 20021937
Alignment:
Q  431 tgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaa---tttgaaatcttataaatccataaaatcttttgaaattgttt 527  Q
    ||||||||||||  ||||||||||||||||| || ||  | |||||||||||||||   | |||||||||||||||| ||||||||           |||    
T  20021787 tgatagagagtgtgttgtaatcatttcttttcaatgagtccttaaaattcataaaatcttgtgaaatcttataaatcgataaaatc----------cttt 20021876  T
Q  528 aaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||||||| |||||||||||||||| |||||  ||||  ||||||||||| |||||    
T  20021877 aaaatcttatgatttaaatccattgaaatccaaattgaaaatcctgatagtcttttaaaat 20021937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 587
Target Start/End: Complemental strand, 36478965 - 36478907
Alignment:
Q  529 aaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaa 587  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  36478965 aaattttatgatgtaaatccattgaaatctaaattgtaaatcttgatagtcttttaaaa 36478907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 519 - 588
Target Start/End: Complemental strand, 56444530 - 56444461
Alignment:
Q  519 aaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||| ||||  ||||||||||| |||||    
T  56444530 aaattctttaaaatcttatgatgtaaatccaatgaaatccaaattaaaaatcctgatagtcttttaaaat 56444461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 419 - 522
Target Start/End: Original strand, 12913653 - 12913758
Alignment:
Q  419 ttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaa--atttgaaatcttataaatccataaaatcttt 516  Q
    ||||||| ||| ||||||||||||  |||||||||||  |||| || ||  ||||||||||||||||   ||||||||||||||||||||| ||||| ||    
T  12913653 ttgagaatattatgatagagagtgtgttgtaatcattcattttcaatgagtctttaaaattcataaatcttttgaaatcttataaatccatcaaatcctt 12913752  T
Q  517 tgaaat 522  Q
    | ||||    
T  12913753 taaaat 12913758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 12913791 - 12913852
Alignment:
Q  527 taaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||||||||||||||||||||||||| |||||  ||||  ||||||||||| |||||    
T  12913791 taaaatcttatgatgtaaatccattgaaatccaaattgaaaatcctgatagtcttttaaaat 12913852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 18635569 - 18635524
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  18635569 atatattatgcattgtccttatcaactgagttaagctcacggggac 18635524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 41880762 - 41880705
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||| |||||||||||||||  ||||||||||||||||    
T  41880762 aaatccataaaatcatttcaaattttttaaaatcttatgaattaaatccattgaaatc 41880705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 46635396 - 46635339
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||| |||||||||||||||  ||||||||||||||||    
T  46635396 aaatccataaaatcatttcaaattctttaaaatcttatgaattaaatccattgaaatc 46635339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 558
Target Start/End: Original strand, 28541969 - 28542059
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||||||||||    
T  28541969 ttaaaattcataaaatccgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatct 28542059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 6459935 - 6459986
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||| |||||||||||||||||  ||||| ||||||||||||||||    
T  6459935 ccggaccttacatatattatgcattgtccatatcaactgagttaagctcacg 6459986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7371558 - 7371617
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    ||||||||||  |||||||||| |||||| |||||| ||||||||||||||||| |||||    
T  7371558 cccggaccttgcatatattatgtattgtccttatcaactgagttaagctcacggagacac 7371617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 24130654 - 24130565
Alignment:
Q  472 ttaaaattcataaaatttg---aaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||||||   ||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  24130654 ttaaaattcataaaatttgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 24130565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 25331559 - 25331648
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  25331559 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 25331648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 30009495 - 30009406
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  30009495 ttaaaattcataaaatctattgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 30009406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 588
Target Start/End: Original strand, 5104840 - 5104942
Alignment:
Q  487 tttgaaatctt-ataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaa 585  Q
    ||||||||||| ||||||||||||| || | | ||||  | | |||||||||||||||||||| || |||||| ||||| |||| || ||||||||| ||    
T  5104840 tttgaaatctttataaatccataaagtcatctcaaatcctatgaaatcttatgatgtaaatcctttaaaatctcaattacaaatcttaatagtcttttaa 5104939  T
Q  586 aat 588  Q
    |||    
T  5104940 aat 5104942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 29910500 - 29910454
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  29910500 atatattatgcattgtccttatcaattgagttaagctcacggggaca 29910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 43183015 - 43183061
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||    
T  43183015 atatattatgcattgtctttatcaactgagatatgctcacggggaca 43183061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 53530058 - 53530008
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||| |||||||||||||||| ||||| | ||||||||||||||||    
T  53530058 cggaccttacatatattatgcattgtttttattaactgagttaagctcacg 53530008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 7246866 - 7246809
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  7246866 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 7246809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 16020570 - 16020627
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  16020570 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 16020627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 19124644 - 19124685
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  19124644 atatattatgtattgtctttatcaactgagttaagctcacgg 19124685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 21266897 - 21266950
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||| ||||||||||||||||||||| ||  |||| ||||||||||||||||    
T  21266897 accttacatatattatgcattgtctttaacaattgagctaagctcacggggaca 21266950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 22202571 - 22202628
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  22202571 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 22202628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 23465403 - 23465460
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||| |||||||||||||||  |||||| |||||||||    
T  23465403 aaatccataaaatcatttcaaattctttaaaatcttatgaattaaatctattgaaatc 23465460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 14136130 - 14136090
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  14136130 atatattatgcattgtctttatcaactgagctaagctcacg 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36203285 - 36203229
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||  ||||||||||||||||| |||||| ||||| |||||||||| |||||    
T  36203285 cggaccttgcatatattatgcattgtccttatcaactgagctaagctcacgaggaca 36203229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 42316836 - 42316888
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    ||||||||  |||||||||||| |||||||| || ||||||||||||||||||    
T  42316836 cggaccttgcatatattatgcactgtctttaccaactgagttaagctcacggg 42316888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 54500620 - 54500568
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||| |||||||||||||||||| || || ||||| ||||||||||    
T  54500620 cccggaccttacatatattatgcattgtctctaccaactgagctaagctcacg 54500568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 3437004 - 3437093
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||  ||| ||||  |||||||||||||||  ||||||||||||||||    
T  3437004 ttaaaattcataaaatatgttgaaatctcttgaaatccataaaattatttcaaatcatttaaaatcttatgaattaaatccattgaaatc 3437093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10336996 - 10337055
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    |||| |||||| ||| ||||||||||||||||  || |||||||||||||| ||||||||    
T  10336996 cccgaaccttacatacattatgcattgtctttgccaactgagttaagctcatggggacac 10337055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 588
Target Start/End: Original strand, 16019800 - 16019863
Alignment:
Q  525 tttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||||||||||  |||||| || ||||| | || ||||||||||||||||||| |||||    
T  16019800 tttaaaatcttatgatacaaatcctttaaaatccatatgataaattttgatagtcttttaaaat 16019863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 25446567 - 25446656
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||| |||||    
T  25446567 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattaaaatc 25446656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 29908106 - 29908055
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||  ||||||||||||||||| ||| || ||||||||||||||||    
T  29908106 ccggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 29908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 513
Target Start/End: Complemental strand, 36479169 - 36479084
Alignment:
Q  431 tgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaa---tttgaaatcttataaatccataaaatc 513  Q
    ||||||||||||  |||||||||||  ||||||| ||  | |||||||||||||||   || ||||||||||||||| ||||||||    
T  36479169 tgatagagagtgttttgtaatcattcatttttaatgagtccttaaaattcataaaatctttagaaatcttataaatctataaaatc 36479084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 39842027 - 39842074
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||| ||||||||||||||||| |||||| |||||||||| |||||    
T  39842027 accttacatatattatgcattgtccttatcaactgagttaagatcacg 39842074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 46676508 - 46676567
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    ||||||||||  ||||||||||||||||| ||| || ||||| |||||||| ||||||||    
T  46676508 cccggaccttgcatatattatgcattgtccttaccaactgagctaagctcatggggacac 46676567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 49469694 - 49469783
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||| ||||||||||    
T  49469694 ttaaaattcataaaatcttttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaattcattgaaatc 49469783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 56096250 - 56096207
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagct 49  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||    
T  56096250 accttacatatattatgcattgtccttatcaactgagttaagct 56096207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7230331 - 7230273
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  ||||||||||||||||| ||| || ||||| |||||||||| |||||    
T  7230331 cccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggaca 7230273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 7922272 - 7922318
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||    
T  7922272 atatattatgcattgtctttaccaactgagataagctcacgtggaca 7922318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 11314711 - 11314757
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||    
T  11314711 atatattatacattgtctttatcaactgagttaagcttacgaggaca 11314757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14202489 - 14202547
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||| |||||||||||||| ||   |||| |||||||||||||||| |||||    
T  14202489 cccggaccttacatatattatgcattatccaaatcaactgagttaagctcacgaggaca 14202547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 16432974 - 16433024
Alignment:
Q  8 cttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||| |||||||||||||||||| | ||||||||| |||||||||| ||||    
T  16432974 cttatatatattatgcattgtctatgtcagctgagctaagctcacgaggac 16433024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18915056 - 18915114
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||| | |||||||||||||||||| ||| || ||||| ||| ||||||||||||    
T  18915056 cccggaccatgaatatattatgcattgtccttaccaactgagctaaactcacggggaca 18915114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 19332323 - 19332369
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| |||||| ||||| |||||||||| |||||    
T  19332323 atatattatgcattgtccttatcatctgagataagctcacgaggaca 19332369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 19908741 - 19908683
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    ||||||||  ||||||||||||||||| ||| || ||||||||||||||| || |||||    
T  19908741 cggaccttgcatatattatgcattgtccttaccaactgagttaagctcacaggaacact 19908683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 558
Target Start/End: Original strand, 32952143 - 32952201
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    |||||| ||||||| ||| ||||  |||||||||||||||  |||||||||||||||||    
T  32952143 aaatccttaaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatct 32952201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42845076 - 42845018
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  ||||||||||||||||| ||  || |||||||||||||||| |||||    
T  42845076 cccggaccttgcatatattatgcattgtcctttccaactgagttaagctcacgaggaca 42845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43722816 - 43722758
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||| |||||||||||||||||  || || ||||||||| |||||| |||||    
T  43722816 cccggaccttacatatattatgcattgtccataccaactgagttaaactcacgaggaca 43722758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 558
Target Start/End: Original strand, 55975064 - 55975122
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    |||||||||||||| ||| ||||  ||||||||||||| |  |||||||||||||||||    
T  55975064 aaatccataaaatcatttcaaatcctttaaaatcttatcaattaaatccattgaaatct 55975122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 7030904 - 7030961
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||  |||| ||||||||||||| || || |||||||||||||||| |||||    
T  7030904 ccggaccttgcatattttatgcattgtctataccaactgagttaagctcacgaggaca 7030961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 16733541 - 16733586
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||| |||| ||||||||| |||||||||||||||| ||||    
T  16733541 atatattatacattatctttatcaactgagttaagctcacgaggac 16733586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 24488461 - 24488416
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| ||| || |||||||||| ||||||||||    
T  24488461 atatattatgcattgtcattaccaactgagttaagatcacggggac 24488416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 38939548 - 38939601
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||| |||||||||||||| || |||||||||||| | |||||||| ||||    
T  38939548 gaccttatatatattatgcattatccttatcagctgagcttagctcacgaggac 38939601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 500 - 556
Target Start/End: Original strand, 1113643 - 1113699
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaat 556  Q
    |||||||||||||| ||| ||||  |||||||||||||||  |||||||||| ||||    
T  1113643 aaatccataaaatcattttaaatcctttaaaatcttatgaattaaatccattaaaat 1113699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 6460100 - 6460144
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    |||||||||||||||||| ||| | ||||||||| ||||||||||    
T  6460100 atatattatgcattgtctctattaactgagttaaactcacgggga 6460144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 17134172 - 17134124
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||| |||||||||||||||||| || ||  |||||||||||||||    
T  17134172 gaccttatatatattatgcattgtctctaccaattgagttaagctcacg 17134124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 557
Target Start/End: Original strand, 28371346 - 28371378
Alignment:
Q  525 tttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||||||||| |||||||||    
T  28371346 tttaaaatcttatgatgtaaatctattgaaatc 28371378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 557
Target Start/End: Complemental strand, 36727676 - 36727644
Alignment:
Q  525 tttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||||||||||||| |||||    
T  36727676 tttaaaatcttatgatgtaaatccattaaaatc 36727644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 557
Target Start/End: Original strand, 41321206 - 41321262
Alignment:
Q  501 aatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||| ||| ||||  ||||||||||| |||  ||||||||||||||||    
T  41321206 aatccataaaatcatttcaaatcctttaaaatcttttgaattaaatccattgaaatc 41321262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 47016664 - 47016610
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagc---tgagttaagctcacgggga 57  Q
    |||||| |||||||||||||||||||||||| |   |||| ||||||||||||||    
T  47016664 accttacatatattatgcattgtctttatcaactattgagctaagctcacgggga 47016610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49473696 - 49473636
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    ||||||||||  ||||||||||||||||| ||| || ||| | |||||||||| |||||||    
T  49473696 cccggaccttgcatatattatgcattgtccttaccaactgggctaagctcacgaggacact 49473636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49952579 - 49952631
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||| |||||||||||||||||   ||||  |||||||||||||||    
T  49952579 cccggaccttacatatattatgcattgtccaaatcaattgagttaagctcacg 49952631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 500 - 548
Target Start/End: Original strand, 53276285 - 53276333
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatcc 548  Q
    |||||||||||||| ||| ||||| |||||||||||||||  |||||||    
T  53276285 aaatccataaaatcatttcaaattctttaaaatcttatgaattaaatcc 53276333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 487 - 597
Target Start/End: Complemental strand, 29930499 - 29930389
Alignment:
Q  487 tttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaa 586  Q
    ||||||||||||||||| | ||||||||||  ||||  ||||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||| |||    
T  29930499 tttgaaatcttataaattcgtaaaatctttgaaaatcatttaaaatcttatgatgtaaatccattgaaatccaaatagtaaatcttgatagtcttttaaa 29930400  T
Q  587 atgactaaagt 597  Q
    || ||||||||    
T  29930399 attactaaagt 29930389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 416 - 569
Target Start/End: Complemental strand, 29977003 - 29976847
Alignment:
Q  416 atgttgagaacattgtgatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaattt---gaaatcttataaatccataaaat 512  Q
    |||||||||| ||||||| ||| ||||  || ||||||||| |||| |||||  | | |||||||||||||| |   ||||||||| |||||||||||||    
T  29977003 atgttgagaatattgtgaaagatagtgttttataatcatttattttcaacgagtcctaaaaattcataaaatcttgtgaaatcttaaaaatccataaaat 29976904  T
Q  513 cttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaat 569  Q
      ||| ||||  ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  29976903 aatttcaaatcctttaaaatcttatgatgtaaatctattgaaatccaaattgtaaat 29976847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 519 - 588
Target Start/End: Complemental strand, 4949720 - 4949651
Alignment:
Q  519 aaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||| |||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||| |||||    
T  4949720 aaattctttaaaatcttatgatataaatctattgaaatccaaattataaattttaatagtcttttaaaat 4949651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 501 - 569
Target Start/End: Original strand, 2475569 - 2475637
Alignment:
Q  501 aatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaat 569  Q
    |||||||||||||  || ||||  |||||||||||||||| ||||||||||||| || |||||||||||    
T  2475569 aatccataaaatcaatttaaatactttaaaatcttatgatttaaatccattgaattccaaattataaat 2475637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 557
Target Start/End: Original strand, 43959964 - 43960054
Alignment:
Q  471 tttaaaattcataaaat---ttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||||   |||||||||  |||| ||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  43959964 tttaaaattcataaaatctgttgaaatctcttaaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 43960054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 525 - 588
Target Start/End: Original strand, 4403497 - 4403560
Alignment:
Q  525 tttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||| ||||||||||||||||| ||||| |||||  ||||| ||||||||||| |||||    
T  4403497 tttaaaatcgtatgatgtaaatccattaaaatcgaaattgaaaattctgatagtcttttaaaat 4403560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 10391896 - 10391807
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  10391896 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 10391807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19778116 - 19778057
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    ||||||||||  ||||||||||||||||| ||| || ||||| |||||||||||||||||    
T  19778116 cccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacggggacac 19778057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 23114971 - 23114882
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  23114971 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 23114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 445 - 588
Target Start/End: Complemental strand, 39189679 - 39189544
Alignment:
Q  445 ttgtaatcatttctttttaacgaaactttaaaattcataaa--atttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgt 542  Q
    ||||||| ||||||||| |||||  | ||||||||||||||   |||||||||||||||||  ||||||||           ||||||||||||||||||    
T  39189679 ttgtaattatttcttttcaacgagtccttaaaattcataaatcttttgaaatcttataaatttataaaatc----------ctttaaaatcttatgatgt 39189590  T
Q  543 aaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||| ||||||||| |||||  ||||  ||||||||||| |||||    
T  39189589 aaatctattgaaatccaaattgaaaatcctgatagtcttttaaaat 39189544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 42734998 - 42734909
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  42734998 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 42734909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 42936995 - 42936906
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  42936995 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcttttaaaatcttatgaattaaatccattgaaatc 42936906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 42937899 - 42937988
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  42937899 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 42937988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 574434 - 574384
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    |||||||||| |||||||||||||||||| ||||| ||||| |||||||||    
T  574434 ccggaccttacatatattatgcattgtctatatcaactgagctaagctcac 574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 558
Target Start/End: Complemental strand, 5576337 - 5576246
Alignment:
Q  471 tttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    |||||||||||||||||   |||||||||  | |||| ||||||||| ||| ||||  |||||||||||||||  |||||||||||||||||    
T  5576337 tttaaaattcataaaatccgttgaaatctcttgaaattcataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatct 5576246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 7506608 - 7506551
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  7506608 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 7506551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29621268 - 29621325
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||| ||||| ||||||||||||||| ||  || ||||||||||||||||||||||||    
T  29621268 cccgaaccttgaatatattatgcattttccataccagctgagttaagctcacggggac 29621325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 33850870 - 33850927
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  33850870 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 33850927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 43073450 - 43073503
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||| |||||||||||||||| |||| || |||||||||||| ||||||||    
T  43073450 gaccttacatatattatgcattgtttttaccaactgagttaagcttacggggac 43073503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 1877684 - 1877724
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  1877684 atatattatgcattgtctatatcaactgagttaagctcacg 1877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 7241420 - 7241454
Alignment:
Q  61 taactaacttctattaactaccaattctcttaata 95  Q
    ||||||||||||||||||||||| |||||||||||    
T  7241420 taactaacttctattaactaccagttctcttaata 7241454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 582
Target Start/End: Complemental strand, 13478106 - 13477980
Alignment:
Q  458 tttttaacgaaactttaaaattcataaaat---ttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattga 553  Q
    ||||||||||  | ||||||||||||||||   ||||||| ||||||| | ||||||||| ||| ||||| ||| || | ||||| ||||||||||||||    
T  13478106 tttttaacgagtccttaaaattcataaaatcttttgaaattttataaaattcataaaatcatttcaaatttttttaatt-ttatgttgtaaatccattga 13478008  T
Q  554 aatctaaattataaattttgatagtcttt 582  Q
    |||  ||||| | ||| ||||||||||||    
T  13478007 aattcaaattgt-aatcttgatagtcttt 13477980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 550 - 588
Target Start/End: Complemental strand, 14028077 - 14028039
Alignment:
Q  550 ttgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  14028077 ttgaaatccaaattataaatattgatagtctttaaaaat 14028039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 556
Target Start/End: Original strand, 41479661 - 41479749
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaat 556  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||| ||||    
T  41479661 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattaaaat 41479749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 42367768 - 42367722
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||  |||||| ||||| ||||||||||||||||    
T  42367768 atatattatgcattgttcttatcaactgagctaagctcacggggaca 42367722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 7679941 - 7679896
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||||||  || |||||||||||| ||||||||    
T  7679941 atatattatgcattgtctttgccaactgagttaagcttacggggac 7679896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 17062361 - 17062406
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||| ||||||| ||||| |||||||||||||||| ||||    
T  17062361 atatattatgtattgtctatatcaactgagttaagctcacgaggac 17062406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 17585997 - 17585952
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||| ||||||| ||||| |||||||||||||||| ||||    
T  17585997 atatattatgtattgtctatatcaactgagttaagctcacgaggac 17585952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 24501492 - 24501435
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  |||||| |||||||||    
T  24501492 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatcaattgaaatc 24501435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 26374040 - 26373983
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  ||| |||||||||||  ||||||||||||||||    
T  26374040 aaatccataaaatcatttcaaatcatttcaaatcttatgaattaaatccattgaaatc 26373983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 29293227 - 29293170
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||| |||||||||  ||||||| ||| | |||||||||||||||| |||||    
T  29293227 ccggaccttacatatattatatattgtctatattaactgagttaagctcacgaggaca 29293170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 7722802 - 7722838
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagct 49  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  7722802 atatattatgcattgtctctatcatctgagttaagct 7722838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 10967251 - 10967203
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    ||||||||||||||||  ||||||  |||||||| ||||||||||||||    
T  10967251 atatattatgcattgttcttatcaattgagttaaactcacggggacact 10967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19701358 - 19701406
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||| |||||||||||||| || |||||| ||||||||| ||||||    
T  19701358 gaccttacatatattatgcattatccttatcaactgagttaaactcacg 19701406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 27718905 - 27718961
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||  |||||||||||||||||  ||||| ||||| |||||||||| ||||    
T  27718905 ccggaccttgcatatattatgcattgtccatatcaactgagctaagctcacgaggac 27718961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 28084321 - 28084281
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||| |||||||| ||||| ||||||||||||||||    
T  28084321 atatattattcattgtctctatcaactgagttaagctcacg 28084281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 28440006 - 28439958
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||| |||||||||||||| ||||||||| |||| |||| ||||||    
T  28440006 gaccttacatatattatgcattatctttatcaactgaattaaactcacg 28439958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 30623332 - 30623284
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    ||||||||||||||||| ||| || ||||| ||||||||| ||||||||    
T  30623332 atatattatgcattgtccttaccaactgagctaagctcacagggacact 30623284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 11997367 - 11997296
Alignment:
Q  487 tttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||| ||||||||    
T  11997367 tttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatc 11997296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 9459079 - 9459123
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  9459079 atatattatgcattgtctttatcaactgagctaagctcacgggga 9459123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 432 - 515
Target Start/End: Complemental strand, 10125207 - 10125121
Alignment:
Q  432 gatagagagtgaattgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaatccataaaatctt 515  Q
    |||||||||||  || |||| |||||||||||| |||   ||||||||||||||||   ||||||||||| ||||||||||||||||    
T  10125207 gatagagagtgtgttataataatttctttttaatgaattcttaaaattcataaaatcttttgaaatcttacaaatccataaaatctt 10125121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 16204839 - 16204887
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacact 61  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  16204839 atatattatgcattgtccttatcaactgagttaagctcacagggacact 16204887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 14198385 - 14198296
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||| | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||| |||||    
T  14198385 ttaaaattcataaaatctattgaaatcttttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattaaaatc 14198296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 557
Target Start/End: Complemental strand, 305296 - 305208
Alignment:
Q  473 taaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  305296 taaaattcataaaatccgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 305208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 37320539 - 37320585
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  37320539 atatattatgcattgtctttaccaactgagttaagctcacgtggaca 37320585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 12407882 - 12407939
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  12407882 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 12407939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 12419942 - 12419999
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  12419942 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 12419999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24548062 - 24548005
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||| ||||||||||| |||||| ||| || ||||| |||||||||||||||    
T  24548062 cccggaccttgaatatattatggattgtccttaccaactgagctaagctcacggggac 24548005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 41853415 - 41853370
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaag 47  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||    
T  41853415 ccggaccttacatatattatgcattgtttatatcagctgagttaag 41853370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 44766382 - 44766439
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  44766382 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 44766439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 563
Target Start/End: Complemental strand, 10125129 - 10125093
Alignment:
Q  527 taaaatcttatgatgtaaatccattgaaatctaaatt 563  Q
    ||||||||||||||||||||||||||||||| |||||    
T  10125129 taaaatcttatgatgtaaatccattgaaatccaaatt 10125093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10991593 - 10991537
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    ||||||||||| |||||||||| |||||| ||| || |||||||||||||| |||||    
T  10991593 cccggaccttacatatattatgtattgtccttaccaactgagttaagctcatgggga 10991537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 12893257 - 12893313
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    |||||||| ||||||||| ||||||  |||||| ||||| |||||||||||||||||    
T  12893257 ggaccttacatatattatacattgttcttatcaactgagctaagctcacggggacac 12893313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 16270244 - 16270334
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatg-atgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||| |||||||||||||| ||  |||||||||||||||    
T  16270244 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaattctttaaaatcttatgaattaaaatccattgaaatc 16270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 27412850 - 27412898
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||| |||||||||||||||||| || || ||||||||||||||||    
T  27412850 gaccttacatatattatgcattgtctctaccaactgagttaagctcacg 27412898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 40967393 - 40967433
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  40967393 atatattatgcattgtccttatcaactgagttaagctcacg 40967433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 24776770 - 24776859
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||||| |  ||||||||||||||||    
T  24776770 ttaaaattcataaaatctcttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttataaattaaatccattgaaatc 24776859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 28202346 - 28202291
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||| |||||||||||||||||  ||||| ||||| |||||||||| ||||    
T  28202346 cggaccttacatatattatgcattgtccctatcaactgagctaagctcacgtggac 28202291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 35317583 - 35317672
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  ||||||||||||| |  ||||||||||||||||    
T  35317583 ttaaaattcataaaatctgttgaaatctgttgaaatccataaaatcatttcaaatcctttaaaatcttattaattaaatccattgaaatc 35317672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 44694727 - 44694680
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    |||||||||||||||||| ||||| |||||||||| ||||| ||||||    
T  44694727 atatattatgcattgtctatatcaactgagttaagttcacgaggacac 44694680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 1861822 - 1861876
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||  |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  1861822 ggaccttgcatatattatgcattgtccatatcagctgagctaagctcacgaggac 1861876  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 5676778 - 5676732
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| ||| || |||||||||||||||| |||||    
T  5676778 atatattatgcattgtcattaccaactgagttaagctcacgaggaca 5676732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 10076913 - 10076871
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    |||||||||| |||||||||||||||| ||||||| |||||||    
T  10076913 atatattatgtattgtctttatcagctaagttaagttcacggg 10076871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12124596 - 12124538
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||  ||||||||||||||||| ||| || ||||| ||| ||||||||||||    
T  12124596 cccggaccttgcatatattatgcattgtccttaccaactgagctaaactcacggggaca 12124538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 24393284 - 24393238
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| ||| || ||||| ||||||||||||||||    
T  24393284 atatattatgcattgtccttaacaactgagctaagctcacggggaca 24393238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 32844911 - 32844865
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctc 50  Q
    |||||||| |||||||||||||| || |||||| |||||||||||||    
T  32844911 ggaccttacatatattatgcattatcattatcaactgagttaagctc 32844865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 39068730 - 39068776
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| |||||| ||||| |||||||||| |||||    
T  39068730 atatattatgcattgtccttatcaactgagctaagctcacgtggaca 39068776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 44926415 - 44926465
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    ||||||| |||||| |||||||||||||| || ||||| ||||||||||||    
T  44926415 gaccttacatatataatgcattgtctttaccaactgagataagctcacggg 44926465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 13000734 - 13000685
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    ||||||||| |||||||||||||| |||||| || ||||| |||||||||    
T  13000734 cggaccttacatatattatgcattatctttaccaactgagctaagctcac 13000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 17842723 - 17842780
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||| |||| ||||||||||||||||  |||||| || ||||||| |||||||||||    
T  17842723 ccggatcttacatatattatgcattgttcttatcaactaagttaagttcacggggaca 17842780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 18231495 - 18231540
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| ||| || ||||| |||||||||||||||    
T  18231495 atatattatgcattgtccttaccaactgagctaagctcacggggac 18231540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 19179072 - 19179117
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| ||| || ||||| |||||||||||||||    
T  19179072 atatattatgcattgtccttaccaactgagctaagctcacggggac 19179117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 21136759 - 21136702
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||| ||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  21136759 aaatccttaaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 21136702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24593427 - 24593374
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    ||||||||||  ||||||||||||||||| ||| || ||||| |||||||||||    
T  24593427 cccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacgg 24593374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 29798531 - 29798584
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||||| ||||||||||||  || || |||||||||||||||| ||||    
T  29798531 gaccttaaatattttatgcattgtccataccaactgagttaagctcacgaggac 29798584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 33064036 - 33063979
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||  |||||||||||||||||  ||||| ||||| |||||||||| |||||    
T  33064036 ccggaccttgcatatattatgcattgtccatatcaactgagctaagctcacgaggaca 33063979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 35727476 - 35727431
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||  ||| || |||||||||||||||||||||    
T  35727476 atatattatgcattgttcttaccaactgagttaagctcacggggac 35727431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 39761477 - 39761432
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||| |||||| ||||| ||| |||||||||||    
T  39761477 atatattatgcattgtccttatcaactgagctaaactcacggggac 39761432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 42181325 - 42181370
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||| ||||||||||||||||||||  | |||||||||||||||    
T  42181325 atatatcatgcattgtctttatcagctacgctaagctcacggggac 42181370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 2661070 - 2661110
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||||||||| ||| || ||||||||||||||||    
T  2661070 atatattatgcattgtccttaccaactgagttaagctcacg 2661110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 7206174 - 7206118
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||  |||||||||||||||||| || || ||||| |||||||||| |||||    
T  7206174 cggaccttgcatatattatgcattgtctctaccaactgagctaagctcacgaggaca 7206118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 7640703 - 7640651
Alignment:
Q  7 ccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||| |||||||||| |||||| ||| ||  |||||||||||||||||||||    
T  7640703 ccttacatatattatgtattgtccttaccaattgagttaagctcacggggaca 7640651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 10332297 - 10332337
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  10332297 atatattatgcattgtccttatcaactgagctaagctcacg 10332337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19512894 - 19512850
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    ||||| ||||||| ||| ||| |||||||||||||||||||||||    
T  19512894 atataatatgcatcgtccttaccagctgagttaagctcacgggga 19512850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 21558818 - 21558874
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||  ||||||||||||||||| ||| |||||||| |||| ||||| |||||    
T  21558818 cggaccttgcatatattatgcattgtccttaccagctgagctaagttcacgaggaca 21558874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31815897 - 31815949
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||  |||||||||||||||||  || || ||||||||||||||||    
T  31815897 cccggaccttgcatatattatgcattgtccctaccaactgagttaagctcacg 31815949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 34977254 - 34977198
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||  |||||||||||||||||  || || |||||||||||||||| ||||    
T  34977254 ccggaccttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 34977198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 588
Target Start/End: Original strand, 8408564 - 8408700
Alignment:
Q  445 ttgtaatcatttctttttaacgaaactttaaaattcataaaat---ttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatg 541  Q
    ||||||| ||||||||| || ||  | |||||||| |||||||   |||||||||||||||||||||||||| |||          ||||||||||||||    
T  8408564 ttgtaataatttcttttcaatgagtccttaaaattaataaaatcttttgaaatcttataaatccataaaatccttt----------aaaatcttatgatg 8408653  T
Q  542 taaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||| |||||||||||| |||||   |||||||||| |||||    
T  8408654 taaatccatggaaatctaaattgtaaatcccgatagtcttttaaaat 8408700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8882409 - 8882466
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||    
T  8882409 cccggaccttacatatattatgcactgtcattatcaactgagttaagctcacggggac 8882466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 21147627 - 21147713
Alignment:
Q  472 ttaaaattcataaaatttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||||| || |||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  21147627 ttaaaattcataaaatctgtaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 21147713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 7630198 - 7630243
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  7630198 atatattatgcattgtctttagcatctgagttaagctcacggggac 7630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 9123857 - 9123913
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| |||| ||||||||||||||||||||| || ||||||||||||||| ||||||    
T  9123857 cggatcttacatatattatgcattgtctttaccaactgagttaagctcacagggaca 9123913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 849777 - 849866
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  849777 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 849866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 7016468 - 7016379
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  7016468 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 7016379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 8545000 - 8545051
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||  ||||||||||||||||| |||||| ||||||||||||||||    
T  8545000 ccggaccttgcatatattatgcattgtccttatcaactgagttaagctcacg 8545051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 525 - 588
Target Start/End: Complemental strand, 9688526 - 9688463
Alignment:
Q  525 tttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaaat 588  Q
    ||||||||||||||||| |||||| |||||||| | || |||||| |||||||||||| |||||    
T  9688526 tttaaaatcttatgatgcaaatcctttgaaatccatatgataaatcttgatagtcttttaaaat 9688463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 23118066 - 23118113
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  23118066 accttacatatattatgcattgtccttatcaactgagttaagctcacg 23118113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 33655783 - 33655694
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  |||| ||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  33655783 ttaaaattcataaaatctgttgaaatctcttaaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 33655694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 34206266 - 34206220
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||    
T  34206266 atatattatgcattgtctttaccaactgagttaaactcacggggaca 34206220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34702541 - 34702487
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    ||||||||||  ||||||||||||||||| ||| || ||||||||||||||||||    
T  34702541 cccggacctttcatatattatgcattgtccttaccaactgagttaagctcacggg 34702487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 4771937 - 4771880
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  4771937 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 4771880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 471 - 558
Target Start/End: Original strand, 6461223 - 6461314
Alignment:
Q  471 tttaaaattcataaaat---ttgaaatcttataaa-tccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    |||||||||||||||||   |||||||| | |||| ||| ||||||| ||| ||||  |||||||||||||||  |||||||||||||||||    
T  6461223 tttaaaattcataaaatctgttgaaatcctttaaaatccttaaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatct 6461314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 31305898 - 31305942
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaag 47  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||    
T  31305898 cggaccttacatatattatgcattgtctttatcaattgagttaag 31305942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 4432165 - 4432122
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaa 46  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||    
T  4432165 cggaccttacatatattatgcattgtccttatcaactgagttaa 4432122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4763196 - 4763247
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    ||||||||||| ||||||||||||||||||||| ||  |||||||| |||||    
T  4763196 cccggaccttacatatattatgcattgtctttaccaattgagttaaactcac 4763247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 16076470 - 16076431
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcac 52  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  16076470 atatattatgcattgtccatatcagctgagttaagctcac 16076431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 35109449 - 35109394
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||  |||||||||| |||||||||| || |||||||||||||||| ||||    
T  35109449 cggaccttgcatatattatgtattgtctttaccaactgagttaagctcacgtggac 35109394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 558
Target Start/End: Complemental strand, 5272608 - 5272550
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatct 558  Q
    |||||||||||||| ||| ||||  ||||||||||||| |  |||||||||||||||||    
T  5272608 aaatccataaaatcatttcaaatcctttaaaatcttattaattaaatccattgaaatct 5272550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 18147577 - 18147623
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||    
T  18147577 atatattatacattgtccttatcaactgagttaagctcacgtggaca 18147623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21316933 - 21316879
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    ||||||||||  ||||||||||||||||| ||| || ||||||||| ||||||||    
T  21316933 cccggacctttcatatattatgcattgtccttaccaactgagttaaactcacggg 21316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28604428 - 28604482
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    ||||||||||| || |||||||||||||||||| || ||||| ||| ||||||||    
T  28604428 cccggaccttacatttattatgcattgtctttaccaactgagctaaactcacggg 28604482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 30893972 - 30893926
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||||||||||||||  | |||||||||||||||| |||||    
T  30893972 atatattatgcattgtctttacaaactgagttaagctcacgaggaca 30893926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 31159468 - 31159430
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctca 51  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  31159468 atatattatgtattgtctttatcaactgagttaagctca 31159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 40446022 - 40445976
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||||||||||| |||||| ||||||||| |||||| |||||    
T  40446022 atatattatgcattgtccttatcaactgagttaaactcacgaggaca 40445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 17144518 - 17144473
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  17144518 atatattatgcattgttcttaacagctgagttaagttcacggggac 17144473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 19783647 - 19783696
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcac 52  Q
    ||||||||  |||||||||| ||||||||||||| || ||||||||||||    
T  19783647 cggaccttgcatatattatgtattgtctttatcaactaagttaagctcac 19783696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 20211719 - 20211670
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggg 55  Q
    |||||| |||||||||||||||| ||||||| ||||||| | ||||||||    
T  20211719 accttatatatattatgcattgtttttatcaactgagttgaactcacggg 20211670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26409304 - 26409251
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    ||||||||||| |||||||||||||||||  || || ||||| |||||||||||    
T  26409304 cccggaccttacatatattatgcattgtccataccaactgagctaagctcacgg 26409251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 27679537 - 27679492
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||||||| |||||| || ||||| |||||||||||||||    
T  27679537 atatattatgcattatctttaccaactgagctaagctcacggggac 27679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 32157690 - 32157633
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||| ||||  ||||||||||||||||    
T  32157690 aaatccataaaatcatttcaaatcttttaaaatctcatgaattaaatccattgaaatc 32157633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39914952 - 39914895
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||  ||||||||||||||||| ||| ||  ||||||||||||||| ||||    
T  39914952 cccggaccttgcatatattatgcattgtccttaccaattgagttaagctcacgcggac 39914895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 43319389 - 43319332
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  || ||||||||||||  ||||||||||||||||    
T  43319389 aaatccataaaatcatttcaaatccttcaaaatcttatgaattaaatccattgaaatc 43319332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 2249428 - 2249484
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||| |||||||||| |||||| |||  | |||||||||||||||| |||||    
T  2249428 cggaccttacatatattatgtattgtccttactaactgagttaagctcacgaggaca 2249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17672310 - 17672362
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||| |||||| ||||||||||||| ||| |||||| ||||| ||||||||||    
T  17672310 cccgaaccttatatatattatgcatcgtccttatcaactgagctaagctcacg 17672362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25979895 - 25979843
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||  ||| ||||||||||||||| ||||  |||||||||||||||    
T  25979895 cccggaccttgcatacattatgcattgtcttaatcaattgagttaagctcacg 25979843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 29695061 - 29695009
Alignment:
Q  6 accttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||| |||||||||||||||||  ||||| |||||||||| ||||| ||||    
T  29695061 accttacatatattatgcattgtccatatcaactgagttaaggtcacgaggac 29695009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 32460060 - 32460016
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaag 47  Q
    ||||||||  |||||||||| ||||||||||||| ||||||||||    
T  32460060 cggaccttgtatatattatgtattgtctttatcaactgagttaag 32460016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 32565573 - 32565517
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||| |||||||||||||| ||  || |||||||| |||||||||| |||||    
T  32565573 cggaccttacatatattatgcattatccctaccagctgagctaagctcacgaggaca 32565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 40507911 - 40507967
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||| ||| |||| ||| ||||||||||| ||| |||||||||||||||| |||||    
T  40507911 cggactttacatattttaagcattgtctttgtcaactgagttaagctcacgaggaca 40507967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42515858 - 42515806
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||| |||||||||||||||||  || || |||| |||||||||||    
T  42515858 cccggaccttacatatattatgcattgtccataccaactgaattaagctcacg 42515806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43135203 - 43135235
Alignment:
Q  1 cccggaccttaaatatattatgcattgtcttta 33  Q
    ||||||||||| |||||||||||||||||||||    
T  43135203 cccggaccttacatatattatgcattgtcttta 43135235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 43396904 - 43396852
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    |||||||||| |||||||||||||||||||| |||  |||| || ||||||||    
T  43396904 ccggaccttacatatattatgcattgtctttgtcaattgagctatgctcacgg 43396852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 6470633 - 6470684
Alignment:
Q  8 cttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  6470633 cttacatatattatgcattgtctttatcaactgagttaagctcacggagaca 6470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4450313 - 4450260
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    ||||||||||  |||||||||||||||||||||||| ||||| |||||||||||    
T  4450313 cccggaccttgcatatattatgcattgtctttatcaactgagctaagctcacgg 4450260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 588
Target Start/End: Original strand, 23929214 - 23929315
Alignment:
Q  487 tttgaaatcttataaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaattttgatagtctttaaaa 586  Q
    |||||||||||||||||||||||| || ||| ||||  | | | ||||||||||||||||||  | |||||  |||||||||| || ||||||||| |||    
T  23929214 tttgaaatcttataaatccataaagtcatttcaaatcctatgacatcttatgatgtaaatcctctaaaatcccaattataaatcttaatagtcttttaaa 23929313  T
Q  587 at 588  Q
    ||    
T  23929314 at 23929315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 6197142 - 6197053
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  6197142 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 6197053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 8381207 - 8381262
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||  |||| |||||||||||||||| || ||||||||||||||||||||||    
T  8381207 ggaccttgcatatgttatgcattgtctttaccaactgagttaagctcacggggaca 8381262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 9987128 - 9987073
Alignment:
Q  5 gaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggacac 60  Q
    ||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||||    
T  9987128 gaccttacatataatatgcattgtccttaccaactgagttaagctcacggggacac 9987073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 29077152 - 29077241
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  29077152 ttaaaattcataaaatcttttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 29077241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 29112124 - 29112213
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  29112124 ttaaaattcataaaatcttttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 29112213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24117499 - 24117557
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||| || || |||| ||||||||| |||||| ||||||||||||||||||||||    
T  24117499 cccggaccgtacatgtattttgcattgtccttatcaactgagttaagctcacggggaca 24117557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 31140834 - 31140880
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||| |||| |||||||||||||||||||||||||| |||||    
T  31140834 atatattatacattatctttatcagctgagttaagctcacgaggaca 31140880  T

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Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 2300319 - 2300262
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  2300319 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 2300262  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 500 - 569
Target Start/End: Original strand, 7052290 - 7052359
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatctaaattataaat 569  Q
    ||||||| |||||| ||| ||||  |||||||||||||||  |||||||||||||||| ||||| |||||    
T  7052290 aaatccacaaaatcatttcaaatcctttaaaatcttatgagttaaatccattgaaatccaaattgtaaat 7052359  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18256934 - 18256877
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||  ||||||||||||||||| |||||| ||||| |||||||||| ||||    
T  18256934 cccggaccttgcatatattatgcattgtccttatcaactgagctaagctcacgaggac 18256877  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Original strand, 2238874 - 2238963
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  ||||| ||||||||||    
T  2238874 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaattcattgaaatc 2238963  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14945523 - 14945581
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||| |||||| |||||||||||| ||||| ||||| ||||| ||||||||| ||||||    
T  14945523 cccgaaccttacatatattatgcactgtctctatcaactgagctaagctcacagggaca 14945581  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 15187112 - 15187058
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    ||||||||  ||||||||||||||||  |||||||||||| ||||||||| ||||    
T  15187112 cggaccttgcatatattatgcattgtacttatcagctgagctaagctcacaggga 15187058  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 15473494 - 15473548
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    ||||||||  ||||||||||||||||  |||||||||||| ||||||||| ||||    
T  15473494 cggaccttgcatatattatgcattgtacttatcagctgagctaagctcacaggga 15473548  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 331908 - 331953
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||||||||||| || || |||||||||||||||| ||||    
T  331908 atatattatgcattgtctctaccaactgagttaagctcacgaggac 331953  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 334179 - 334142
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctc 50  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  334179 atatattatgcattgtctttatcaactgagctaagctc 334142  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Original strand, 1392114 - 1392171
Alignment:
Q  500 aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    |||||||||||||| ||| ||||  |||||||||||||||  |||||| |||||||||    
T  1392114 aaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatctattgaaatc 1392171  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 7081676 - 7081721
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  7081676 atatattatgtattgtctttatcaactgagctaagctcacgaggac 7081721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16390480 - 16390423
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    ||||||||||| |||||||||||||||||  || || ||||| |||||||||| ||||    
T  16390480 cccggaccttacatatattatgcattgtccctaccaactgaggtaagctcacgaggac 16390423  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 25165327 - 25165270
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    |||||||||| |||||||||||||||||   ||||||||||||| | ||||| |||||    
T  25165327 ccggaccttacatatattatgcattgtccaaatcagctgagttatgttcacgaggaca 25165270  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 28046200 - 28046241
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacgg 54  Q
    |||||||||||||||||||||||| ||||  |||||||||||    
T  28046200 atatattatgcattgtctttatcaactgaactaagctcacgg 28046241  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 13496166 - 13496110
Alignment:
Q  2 ccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggac 58  Q
    |||||||||  ||||||||||||||||   ||||| |||||||||||||||| ||||    
T  13496166 ccggaccttgcatatattatgcattgttcatatcaactgagttaagctcacgaggac 13496110  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 14552376 - 14552336
Alignment:
Q  13 atatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||||||||| ||| ||||| ||||||||||||||||    
T  14552376 atatattatgcattatctctatcaactgagttaagctcacg 14552336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20720791 - 20720843
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||| |||||||||||||||||  || || ||||| ||||||||||    
T  20720791 cccggaccttacatatattatgcattgtccataacaactgagctaagctcacg 20720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 31971578 - 31971522
Alignment:
Q  3 cggaccttaaatatattatgcattgtctttatcagctgagttaagctcacggggaca 59  Q
    ||||||||  ||||||||||||||||| ||| || |||||||||||| ||| |||||    
T  31971578 cggaccttgcatatattatgcattgtccttaccaactgagttaagcttacgaggaca 31971522  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33824932 - 33824880
Alignment:
Q  1 cccggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    ||||||||||  ||||||||||||||||| |||||| ||||| |||| |||||    
T  33824932 cccggaccttgcatatattatgcattgtccttatcaactgagctaagatcacg 33824880  T

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Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 24734 - 24645
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   ||||||| || | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  24734 ttaaaattcataaaatcttttgaaattttttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 24645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 37251 - 37162
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   ||||||| || | |||||||||||||| ||| ||||  |||||||||||||||  ||||||||||||||||    
T  37251 ttaaaattcataaaatcttttgaaattttttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatc 37162  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 472 - 556
Target Start/End: Complemental strand, 37858 - 37770
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaat 556  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||||||||    
T  37858 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaat 37770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25437 - 25384
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacgggga 57  Q
    |||||||  ||||||||||||||||| ||| || ||||||||||||||||||||    
T  25437 ggaccttgcatatattatgcattgtccttaccaactgagttaagctcacgggga 25384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 14782 - 14693
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||| |||||    
T  14782 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccatttaaatc 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 557
Target Start/End: Complemental strand, 15425 - 15336
Alignment:
Q  472 ttaaaattcataaaat---ttgaaatcttat-aaatccataaaatcttttgaaattgtttaaaatcttatgatgtaaatccattgaaatc 557  Q
    ||||||||||||||||   |||||||||  | |||||||||||||| ||| ||||  |||||||||||||||  |||||||||| |||||    
T  15425 ttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccatttaaatc 15336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34901 - 34950
Alignment:
Q  4 ggaccttaaatatattatgcattgtctttatcagctgagttaagctcacg 53  Q
    |||||||  ||||||||||||||||| ||| || ||||||||||||||||    
T  34901 ggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 34950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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