View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20019_low_15 (Length: 388)

Name: NF20019_low_15
Description: NF20019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20019_low_15
NF20019_low_15
[»] chr3 (50 HSPs)
chr3 (16-388)||(6096129-6096513)
chr3 (16-175)||(36018330-36018489)
chr3 (70-188)||(51398499-51398617)
chr3 (16-203)||(31340570-31340771)
chr3 (277-365)||(44163096-44163185)
chr3 (277-365)||(44189216-44189305)
chr3 (16-175)||(43404262-43404433)
chr3 (20-175)||(43402323-43402490)
chr3 (97-203)||(29812720-29812827)
chr3 (97-188)||(34490687-34490778)
chr3 (16-180)||(40912800-40912976)
chr3 (97-220)||(49200073-49200196)
chr3 (39-203)||(55302517-55302692)
chr3 (16-203)||(4569391-4569590)
chr3 (97-204)||(46173173-46173279)
chr3 (97-253)||(44331851-44332012)
chr3 (54-203)||(54593144-54593305)
chr3 (97-180)||(5236861-5236944)
chr3 (54-188)||(29810541-29810687)
chr3 (97-198)||(44331232-44331333)
chr3 (97-178)||(5258548-5258630)
chr3 (97-184)||(7761941-7762028)
chr3 (97-184)||(7764128-7764216)
chr3 (97-184)||(45094840-45094928)
chr3 (97-203)||(36029530-36029637)
chr3 (97-178)||(3393289-3393370)
chr3 (97-198)||(16264785-16264887)
chr3 (97-175)||(40592353-40592431)
chr3 (136-201)||(40734156-40734221)
chr3 (136-201)||(40735087-40735152)
chr3 (136-216)||(8370020-8370099)
chr3 (137-196)||(23410774-23410833)
chr3 (136-203)||(27027183-27027250)
chr3 (97-203)||(27038478-27038585)
chr3 (97-203)||(35925927-35926034)
chr3 (16-62)||(49200000-49200046)
chr3 (97-184)||(9636532-9636620)
chr3 (97-203)||(47923445-47923553)
chr3 (136-203)||(21711678-21711745)
chr3 (136-199)||(30709342-30709405)
chr3 (54-104)||(29812832-29812882)
chr3 (97-188)||(37726111-37726203)
chr3 (98-188)||(33386233-33386324)
chr3 (97-150)||(5260727-5260781)
chr3 (98-184)||(8127068-8127154)
chr3 (54-104)||(30709451-30709501)
chr3 (137-170)||(24128212-24128245)
chr3 (136-203)||(1735847-1735914)
chr3 (76-104)||(34490783-34490811)
chr3 (97-184)||(39032117-39032205)
[»] scaffold0286 (1 HSPs)
scaffold0286 (16-220)||(10981-11197)
[»] chr4 (53 HSPs)
chr4 (16-220)||(6655379-6655595)
chr4 (16-188)||(2209175-2209347)
chr4 (16-180)||(40630447-40630623)
chr4 (16-180)||(50674375-50674551)
chr4 (97-218)||(54882465-54882586)
chr4 (54-188)||(26175985-26176119)
chr4 (39-183)||(26363725-26363881)
chr4 (54-180)||(35661902-35662028)
chr4 (99-203)||(9927867-9927971)
chr4 (54-188)||(12739899-12740034)
chr4 (97-203)||(12745820-12745926)
chr4 (54-188)||(12748105-12748240)
chr4 (70-184)||(56179001-56179116)
chr4 (97-184)||(52095764-52095852)
chr4 (70-184)||(5370452-5370567)
chr4 (54-170)||(34570763-34570891)
chr4 (16-161)||(50263227-50263383)
chr4 (97-186)||(46570148-46570237)
chr4 (97-188)||(37740299-37740390)
chr4 (97-196)||(5429345-5429444)
chr4 (97-180)||(41639028-41639111)
chr4 (97-203)||(25861585-25861693)
chr4 (97-175)||(36314812-36314890)
chr4 (97-175)||(36329021-36329099)
chr4 (74-166)||(10047778-10047871)
chr4 (136-203)||(16628425-16628492)
chr4 (16-180)||(27417480-27417656)
chr4 (70-150)||(48142763-48142844)
chr4 (97-150)||(54200310-54200363)
chr4 (97-170)||(8689083-8689157)
chr4 (136-201)||(3778025-3778090)
chr4 (97-188)||(5148114-5148206)
chr4 (98-150)||(29254205-29254257)
chr4 (97-184)||(6742988-6743075)
chr4 (221-256)||(54882411-54882446)
chr4 (54-104)||(5429449-5429499)
chr4 (70-104)||(9927826-9927860)
chr4 (97-175)||(54867616-54867694)
chr4 (76-169)||(55085934-55086027)
chr4 (97-198)||(3909760-3909860)
chr4 (97-184)||(5268772-5268860)
chr4 (136-188)||(13992731-13992783)
chr4 (136-188)||(28468073-28468125)
chr4 (54-102)||(29254265-29254313)
chr4 (137-188)||(3754685-3754736)
chr4 (136-175)||(5396272-5396311)
chr4 (136-199)||(16622850-16622913)
chr4 (97-180)||(36994241-36994324)
chr4 (97-150)||(30000877-30000931)
chr4 (138-175)||(48142822-48142859)
chr4 (138-175)||(52083007-52083044)
chr4 (138-175)||(52094014-52094051)
chr4 (39-87)||(41639133-41639181)
[»] chr1 (35 HSPs)
chr1 (16-268)||(192971-193251)
chr1 (18-198)||(37033600-37033792)
chr1 (97-188)||(11348174-11348265)
chr1 (97-188)||(37879513-37879604)
chr1 (97-180)||(44454840-44454923)
chr1 (101-188)||(10924896-10924983)
chr1 (97-188)||(31658911-31659002)
chr1 (101-188)||(49918022-49918109)
chr1 (97-184)||(20762348-20762436)
chr1 (131-202)||(28220665-28220737)
chr1 (99-184)||(3189027-3189113)
chr1 (99-184)||(3197844-3197930)
chr1 (99-184)||(3206662-3206748)
chr1 (131-188)||(28223860-28223917)
chr1 (16-104)||(13547618-13547706)
chr1 (16-104)||(13549529-13549617)
chr1 (97-188)||(3156540-3156631)
chr1 (16-62)||(37879440-37879486)
chr1 (98-198)||(4553053-4553153)
chr1 (54-150)||(30476797-30476905)
chr1 (97-150)||(13316722-13316776)
chr1 (16-62)||(29135841-29135887)
chr1 (97-149)||(29135762-29135814)
chr1 (151-203)||(29652307-29652359)
chr1 (54-100)||(1833295-1833341)
chr1 (74-104)||(31659007-31659037)
chr1 (131-188)||(1833194-1833251)
chr1 (97-150)||(13547711-13547763)
chr1 (97-150)||(13549622-13549674)
chr1 (158-203)||(30476892-30476937)
chr1 (97-188)||(13604191-13604283)
chr1 (136-188)||(19361008-19361060)
chr1 (136-188)||(19365864-19365916)
chr1 (136-188)||(26644469-26644521)
chr1 (76-104)||(29135819-29135847)
[»] chr8 (31 HSPs)
chr8 (16-220)||(42435520-42435736)
chr8 (97-203)||(15212443-15212550)
chr8 (54-198)||(43036086-43036242)
chr8 (97-198)||(30143005-30143106)
chr8 (97-200)||(11383449-11383552)
chr8 (98-188)||(27810971-27811061)
chr8 (97-203)||(22975974-22976080)
chr8 (16-150)||(4283039-4283185)
chr8 (97-184)||(4731335-4731422)
chr8 (97-184)||(1746622-1746710)
chr8 (97-180)||(12703043-12703126)
chr8 (97-198)||(4743597-4743699)
chr8 (97-184)||(31217933-31218021)
chr8 (131-184)||(4733502-4733555)
chr8 (97-198)||(10014822-10014923)
chr8 (97-169)||(34254732-34254805)
chr8 (99-180)||(40221227-40221308)
chr8 (97-188)||(5702048-5702140)
chr8 (97-184)||(34256908-34256996)
chr8 (97-184)||(42497891-42497979)
chr8 (97-218)||(1345775-1345895)
chr8 (97-184)||(19945743-19945831)
chr8 (144-220)||(33351812-33351888)
chr8 (70-104)||(15212555-15212589)
chr8 (97-150)||(17982363-17982417)
chr8 (54-104)||(30143111-30143161)
chr8 (54-104)||(33351919-33351969)
chr8 (16-62)||(40221337-40221383)
chr8 (97-150)||(44303564-44303618)
chr8 (136-188)||(1261510-1261562)
chr8 (76-104)||(40221315-40221343)
[»] chr7 (40 HSPs)
chr7 (14-188)||(29608207-29608382)
chr7 (16-188)||(6360441-6360625)
chr7 (97-203)||(47674347-47674454)
chr7 (97-203)||(47676540-47676647)
chr7 (54-153)||(31733311-31733410)
chr7 (54-209)||(14070182-14070350)
chr7 (54-209)||(14380210-14380378)
chr7 (97-203)||(27347581-27347687)
chr7 (97-203)||(4585819-4585925)
chr7 (97-184)||(23554716-23554804)
chr7 (97-188)||(18126318-18126408)
chr7 (97-200)||(2389735-2389838)
chr7 (39-203)||(32358388-32358564)
chr7 (16-96)||(48599853-48599933)
chr7 (97-180)||(43863942-43864025)
chr7 (97-220)||(33331987-33332110)
chr7 (97-188)||(4538955-4539046)
chr7 (97-188)||(4796238-4796329)
chr7 (97-184)||(19495646-19495735)
chr7 (97-184)||(4178451-4178539)
chr7 (76-170)||(2361540-2361635)
chr7 (97-166)||(2647288-2647357)
chr7 (97-200)||(49092127-49092232)
chr7 (54-150)||(2761651-2761759)
chr7 (97-180)||(26416994-26417077)
chr7 (101-188)||(48489103-48489190)
chr7 (54-104)||(18126413-18126463)
chr7 (97-175)||(30026404-30026481)
chr7 (97-150)||(1113367-1113420)
chr7 (158-203)||(34311285-34311330)
chr7 (131-188)||(48599934-48599991)
chr7 (97-203)||(79826-79933)
chr7 (136-188)||(21646495-21646547)
chr7 (136-188)||(25767398-25767450)
chr7 (16-62)||(2389865-2389911)
chr7 (54-104)||(2647362-2647412)
chr7 (70-104)||(4585930-4585964)
chr7 (97-150)||(24515164-24515218)
chr7 (54-104)||(26417082-26417132)
chr7 (70-104)||(27347692-27347726)
[»] scaffold0014 (1 HSPs)
scaffold0014 (16-203)||(80812-81011)
[»] chr5 (32 HSPs)
chr5 (54-188)||(42428779-42428913)
chr5 (54-150)||(533492-533588)
chr5 (97-202)||(42426639-42426745)
chr5 (18-104)||(27015083-27015169)
chr5 (20-104)||(38746556-38746640)
chr5 (54-180)||(30683268-30683395)
chr5 (97-203)||(32636481-32636588)
chr5 (97-203)||(5057489-5057595)
chr5 (97-209)||(37438797-37438910)
chr5 (96-180)||(38746451-38746535)
chr5 (137-267)||(212942-213068)
chr5 (97-202)||(13487864-13487967)
chr5 (97-203)||(40146707-40146813)
chr5 (97-183)||(13239430-13239516)
chr5 (97-150)||(535614-535667)
chr5 (97-203)||(12083731-12083838)
chr5 (39-106)||(5057598-5057665)
chr5 (136-203)||(11916525-11916592)
chr5 (97-150)||(13342771-13342825)
chr5 (70-104)||(13487972-13488006)
chr5 (54-104)||(19806175-19806225)
chr5 (97-150)||(25412472-25412526)
chr5 (138-188)||(28751027-28751077)
chr5 (97-150)||(19806117-19806170)
chr5 (97-150)||(39468936-39468989)
chr5 (56-112)||(3075976-3076032)
chr5 (97-188)||(9352903-9352995)
chr5 (158-196)||(11181412-11181450)
chr5 (97-146)||(30182302-30182352)
chr5 (74-123)||(15464935-15464984)
chr5 (70-99)||(32636598-32636627)
chr5 (136-188)||(24136336-24136388)
[»] chr2 (32 HSPs)
chr2 (70-203)||(39284554-39284688)
chr2 (277-365)||(32719360-32719449)
chr2 (70-184)||(29867556-29867671)
chr2 (277-363)||(32728309-32728396)
chr2 (97-188)||(2837248-2837339)
chr2 (97-196)||(36318413-36318513)
chr2 (39-220)||(35447436-35447627)
chr2 (97-184)||(36988479-36988567)
chr2 (77-184)||(6595378-6595486)
chr2 (99-209)||(17863844-17863955)
chr2 (97-203)||(33528177-33528284)
chr2 (137-203)||(45726464-45726530)
chr2 (97-184)||(34389287-34389375)
chr2 (97-183)||(45099432-45099519)
chr2 (97-184)||(20522659-20522746)
chr2 (97-203)||(14698563-14698669)
chr2 (98-203)||(23078025-23078131)
chr2 (136-203)||(13569807-13569874)
chr2 (97-203)||(21630382-21630489)
chr2 (136-203)||(8389703-8389768)
chr2 (97-150)||(2334821-2334875)
chr2 (97-150)||(4503536-4503590)
chr2 (136-184)||(10706825-10706873)
chr2 (97-188)||(28258746-28258838)
chr2 (97-184)||(39483313-39483401)
chr2 (97-150)||(5723658-5723712)
chr2 (97-166)||(17865614-17865684)
chr2 (54-104)||(33118517-33118567)
chr2 (97-150)||(36206069-36206123)
chr2 (138-175)||(2334767-2334804)
chr2 (136-188)||(25410118-25410170)
chr2 (136-188)||(30833017-30833069)
[»] scaffold0066 (1 HSPs)
scaffold0066 (97-198)||(20819-20920)
[»] chr6 (29 HSPs)
chr6 (16-183)||(3809238-3809414)
chr6 (39-199)||(21593110-21593282)
chr6 (97-183)||(9183414-9183500)
chr6 (97-188)||(22964135-22964226)
chr6 (97-188)||(23824167-23824258)
chr6 (98-175)||(603642-603719)
chr6 (97-203)||(31979954-31980061)
chr6 (136-203)||(31086025-31086092)
chr6 (97-180)||(5407312-5407396)
chr6 (97-180)||(5411637-5411721)
chr6 (104-183)||(17759415-17759494)
chr6 (97-201)||(5017050-5017156)
chr6 (97-160)||(24714809-24714872)
chr6 (97-170)||(26661422-26661495)
chr6 (97-170)||(26767393-26767466)
chr6 (97-150)||(5413852-5413906)
chr6 (97-175)||(5571846-5571924)
chr6 (97-163)||(24435566-24435632)
chr6 (97-150)||(30834941-30834995)
chr6 (97-150)||(33160758-33160812)
chr6 (97-188)||(5757047-5757139)
chr6 (101-188)||(21272558-21272645)
chr6 (16-58)||(603568-603610)
chr6 (97-150)||(5406602-5406656)
chr6 (97-150)||(5410927-5410981)
chr6 (97-150)||(16452844-16452898)
chr6 (97-184)||(18234520-18234608)
chr6 (136-188)||(22709497-22709549)
chr6 (97-188)||(23896769-23896861)
[»] scaffold0176 (1 HSPs)
scaffold0176 (97-196)||(17668-17767)
[»] scaffold0466 (2 HSPs)
scaffold0466 (16-104)||(6878-6967)
scaffold0466 (158-203)||(6788-6833)
[»] scaffold0002 (1 HSPs)
scaffold0002 (97-175)||(434217-434297)
[»] scaffold0087 (1 HSPs)
scaffold0087 (97-188)||(36401-36493)
[»] scaffold0016 (1 HSPs)
scaffold0016 (97-184)||(114263-114350)
[»] scaffold0098 (1 HSPs)
scaffold0098 (97-191)||(45635-45730)
[»] scaffold0006 (2 HSPs)
scaffold0006 (97-175)||(2930-3009)
scaffold0006 (97-188)||(132848-132940)
[»] scaffold0036 (1 HSPs)
scaffold0036 (137-203)||(86066-86131)
[»] scaffold0510 (1 HSPs)
scaffold0510 (97-188)||(1179-1271)


Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 16 - 388
Target Start/End: Original strand, 6096129 - 6096513
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac------------gac 103  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||            |||    
T  6096129 atgggtcaaagaatgcatatactgtgttcatatcctgacaaaatcgtgtcatgatttcccaaatcgtgacacatttggtgcgtacgacccaaggtacgac 6096228  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||| ||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||    
T  6096229 caaccttatcctgaaaatttgtccaataagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaaccatgctcagtgcct 6096328  T
Q  204 tcaaaaatcatgacacgacgtttcttcactttctccaaaatcatttttgaggcgctttgcaacaaataggaaatagaacttgatgcatctgtcatatagt 303  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||    
T  6096329 tcaaaattcgtgacacgacgtttcttcactttctccaaaatcatttttgaggcactttgcaacaaagagggaatagaacttgatgcatctgtcatatagt 6096428  T
Q  304 gaaacttgcaacagatttaaaacccttgattaataactcaaacaaatcaagtgttagtcatcaaaggggaatcaaatctacttcc 388  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6096429 gaaacttgcaacagatttaaaactctttattaataactcaaacaaatcaagtgttagtcatcaaaggggaatcaaatctacttcc 6096513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 36018489 - 36018330
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattct 115  Q
    |||||||||||||||||||| | ||||||| | |||| ||||||||| ||| | ||||||||||||||||| | ||||||||||||||||||||||| ||    
T  36018489 atgggtcaaagaatgcatatgtagtgttcagatccgggcaaaatcgtgtcacgttttcccaaatcgtgacatggttggtgcgtacgaccaaccttatcct 36018390  T
Q  116 gaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
     ||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||    
T  36018389 aaaaacgtgcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattg 36018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 51398617 - 51398499
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtca 169  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||  || |||||||| |||||||||||| ||||||||||||||    
T  51398617 tttcccaaatcgtgacacgtttggtgcgtacgaccaaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtca 51398518  T
Q  170 caattggacaccctgcaaa 188  Q
    |||||||||||||||||||    
T  51398517 caattggacaccctgcaaa 51398499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 31340570 - 31340771
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaa-tcgtgacacgtttggtgcgtac------------ga 102  Q
    |||||||||||||||||||||||||||||| | | |||||||||| | ||| ||||||||||| ||||| ||||||||||||||||            ||    
T  31340570 atgggtcaaagaatgcatatattgtgttcagatctggacaaaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacga 31340669  T
Q  103 ccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgttttt-ccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgc 201  Q
    |||||||||| |||||||||||||||  |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  31340670 ccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcatgtttttcccaaaatcatgtcacgattggacaccctgaaaaccatgctcactgc 31340769  T
Q  202 ct 203  Q
    ||    
T  31340770 ct 31340771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 44163096 - 44163185
Alignment:
Q  277 tagaacttgatgcatctgtcatatagtgaaacttgcaacagatttaaaacccttga-ttaataactcaaacaaatcaagtgttagtcatc 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44163096 tagaacttgatgcatctgtcatatagtgaaacttgcaacagatttaaaacccttgatttaataactcaaacaaatcaagtgttagtcatc 44163185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 44189216 - 44189305
Alignment:
Q  277 tagaacttgatgcatctgtcatatagtgaaacttgcaacagatttaaaacccttga-ttaataactcaaacaaatcaagtgttagtcatc 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44189216 tagaacttgatgcatctgtcatatagtgaaacttgcaacagatttaaaacccttgatttaataactcaaacaaatcaagtgttagtcatc 44189305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 43404262 - 43404433
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgac 103  Q
    |||||||||||||| ||||||||||||||| | ||||| |||||||| ||| |||||||||||||||||||||||||||||            |||||||    
T  43404262 atgggtcaaagaatacatatattgtgttcagatccggagaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgac 43404361  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    | ||||||| |||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||| ||||    
T  43404362 cgaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattg 43404433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 43402323 - 43402490
Alignment:
Q  20 gtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aac 107  Q
    ||||||||||||||||||| |||||| | | | |||||||| | |||  ||||||||||||||||||||||||||||||||||||            |||    
T  43402323 gtcaaagaatgcatatattatgttcagatcagaacaaaatcatgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaac 43402422  T
Q  108 cttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||    
T  43402423 cttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgtttctccaaaatcgtgtcacgattg 43402490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 29812827 - 29812720
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgc-aaatcatgct 195  Q
    |||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||    
T  29812827 gtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 29812728  T
Q  196 cactgcct 203  Q
    ||||||||    
T  29812727 cactgcct 29812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 34490778 - 34490687
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  34490778 gtacaaccaaccttatcctgaaaacttgcccaataagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggataccctgcaaa 34490687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 40912976 - 40912800
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgt------------acgac 103  Q
    |||||||||||||||| || || ||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||            |||||    
T  40912976 atgggtcaaagaatgcttacatagtgttcagatccggacaaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgatccaagatacgac 40912877  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    || |||||| | |||||||||||||  |||||||||||||||||||||||| ||||||| || |||| |||| ||||    
T  40912876 cagccttatccagaaaacttgcccaacaagccgaaaatcgtgtcacgttttcccaaaattgtatcacgattgaacac 40912800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 49200073 - 49200196
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||| |||||||    
T  49200073 gtacgaccaaccttatcctgaaaacatgcccagcaagccgaaaatcgtgtcacgtttccccaacatcgtgtcacgattggacaccctgcaaaacatgctc 49200172  T
Q  197 actgccttcaaaaatcatgacacg 220  Q
    || || ||  |||||| |||||||    
T  49200173 acggcattgcaaaatcgtgacacg 49200196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 55302517 - 55302692
Alignment:
Q  39 gtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac------------gaccaaccttattctgaaaacttgcc 126  Q
    ||||||| | ||||||||||| || ||| |||||||||||||||||||||||||||||||||            |||||||||||| |||||||||||||    
T  55302517 gtgttcagatccggacaaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcc 55302616  T
Q  127 cagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||| |||||||||||||| ||||| |||||| |||||||||||| |||| |||||||| |||  |||||||||||||    
T  55302617 cagcaagccgaaaatcgtatcacg-ttttcccaaatcgtgtcacgattgaacaccctgaaaacaatgctcactgcct 55302692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 4569590 - 4569391
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac------------gac 103  Q
    |||||||||||||||| |||||| |||||| | |||  ||||||||| ||| | |||||  || ||||||||| |||||||||||            |||    
T  4569590 atgggtcaaagaatgcttatattttgttcaaatccgagcaaaatcgtgtcacgttttccacaaccgtgacacggttggtgcgtacgacccaaggtacgac 4569491  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||||  ||| ||||| ||||||||    
T  4569490 caaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcatgtcacgattggacaccctaaaaaccatgcgcactgcct 4569391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 46173279 - 46173173
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||| ||||||  |||||| || |||||||| ||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  46173279 gtacgaccaaccttatcctgaaaacgtgcccaacaagccggaa-tcgtgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaaaccatgctc 46173181  T
Q  197 actgcctt 204  Q
    ||||||||    
T  46173180 actgcctt 46173173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 44331851 - 44332012
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||| ||| ||||  ||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||    
T  44331851 gtacgactaactttatcttgaaaacgtacccaggaagccaaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaaacatactc 44331950  T
Q  197 actgccttcaaaaatcatgacacg-----acgtttcttcactttctccaaaatcatttttga 253  Q
    || || ||   ||||| |||||||     ||| |||||||||||||||||| ||| ||||||    
T  44331951 acggcattgcgaaatcgtgacacggtgacacgattcttcactttctccaaactcaattttga 44332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 54 - 203
Target Start/End: Complemental strand, 54593305 - 54593144
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aaccttattctgaaaacttgcccagtaagccgaaaat 141  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||            |||||||| |||||||| ||||||| |||  ||||||    
T  54593305 caaaatcgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaat 54593206  T
Q  142 cgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||| ||||||| | ||||| |||| | ||| || ||| ||||||||||||||    
T  54593205 cgtgtcacgttttcccaaaattgagtcacgattgaataccatgaaaaccatgctcactgcct 54593144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 5236861 - 5236944
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  5236861 gtacgaccaaacttatcctgaaaactttcccagcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacac 5236944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 29810687 - 29810541
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aaccttattctgaaaacttgcccagtaagccgaaaat 141  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||            |||||||| ||||||| ||| |||| ||||| |||||    
T  29810687 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaat 29810588  T
Q  142 cgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
     |||  ||||||||| ||||||||||||| |||||||||||||||||    
T  29810587 tgtgctacgtttttctaaaatcgtgtcacgattggacaccctgcaaa 29810541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 44331333 - 44331232
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||| | ||||| ||||| ||||||||||||| |||| ||||||||||||||| |||| |||||| ||||| ||| |||    
T  44331333 gtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtcacgattgaacacccagcaaaacatactc 44331234  T
Q  197 ac 198  Q
    ||    
T  44331233 ac 44331232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 5258548 - 5258630
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggac 178  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||| ||||||||||||||| |||||||    
T  5258548 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggac 5258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 7762028 - 7761941
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  7762028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg-tttcccaaaatcgtgtcacgattggacgccctg 7761941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 7764216 - 7764128
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| || |||| ||||||||  ||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  7764216 gtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctg 7764128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 45094928 - 45094840
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||  ||||| |||||||||||||| ||| ||||||| ||||||| ||||||| |||||    
T  45094928 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaattgtgtcacgattggacgccctg 45094840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 36029530 - 36029637
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| |||||||| | ||||| |||   ||||||||||||||||||||||||||||||| ||| |||   ||||||||||| |||| |    
T  36029530 gtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattaagcaccctgcaaaccatgtt 36029629  T
Q  196 cactgcct 203  Q
    | ||||||    
T  36029630 cgctgcct 36029637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 3393370 - 3393289
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggac 178  Q
    ||||||||||| |||| ||||||| ||||||||| ||||| |||||||||||||| ||| ||||||||||||||| |||||||    
T  3393370 gtacgaccaac-ttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggac 3393289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 16264785 - 16264887
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| |||||||| | |||||  ||   ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| ||||||    
T  16264785 gtacgaccaaccttatcctgaaaacgtacccagctagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgct 16264884  T
Q  196 cac 198  Q
    |||    
T  16264885 cac 16264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 40592431 - 40592353
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||| |||||||| || |||| |||  ||||||||||||||||||| ||||||||||| ||| ||||    
T  40592431 gtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 40592353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 40734221 - 40734156
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgc 201  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| ||||||||||||    
T  40734221 gaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgc 40734156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 40735152 - 40735087
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgc 201  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| ||||||||||||    
T  40735152 gaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgc 40735087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 8370099 - 8370020
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgccttcaaaaatcatga 216  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| |||||||||| || | |||||||||||    
T  8370099 gaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactacc-tgaaaaatcatga 8370020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 23410774 - 23410833
Alignment:
Q  137 aaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  23410774 aaaattgtgacacgtttttccaaaattgtgtcacgattggacaccctgcaaaacatgctc 23410833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 27027183 - 27027250
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||| ||||||| ||||||||||||||    
T  27027183 gaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgcaaaccatgctcactgcct 27027250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 27038478 - 27038585
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| |||||||| | ||||  |||   |||||||||||||| |||| ||||||||||| ||  ||||  ||||||||||| ||||||    
T  27038478 gtacgaccaaccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacattttcccaaaatcgtgacatgattgagcaccctgcaaaccatgct 27038577  T
Q  196 cactgcct 203  Q
    ||||||||    
T  27038578 cactgcct 27038585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 35925927 - 35926034
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| |||||||| | ||||  |||   |||||||||||||||||||  |||| ||||| ||| ||||  ||||||||||| ||||||    
T  35925927 gtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttctcaaactcgtgacacgattgagcaccctgcaaaccatgct 35926026  T
Q  196 cactgcct 203  Q
    ||||||||    
T  35926027 cactgcct 35926034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 49200000 - 49200046
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgt 62  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||    
T  49200000 atgggtcaaagaatgcatatattgtgttcagatccggacaaaatcgt 49200046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 9636532 - 9636620
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| |||| |||  ||||| |||||||||||| | ||| |||||||| |||||| ||||||| |||||    
T  9636532 gtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaaatcgtgtcatgatttcccaaaatcatgtcacgattggacgccctg 9636620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 47923553 - 47923445
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgc 194  Q
    |||||||||||||||| ||||||| | | ||||| |||   ||||||||||||||||||| ||||||  ||| ||| ||||  ||||||||||| |||||    
T  47923553 gtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaaatgtgacacgattgagcaccctgcaaaccatgc 47923454  T
Q  195 tcactgcct 203  Q
    |||||||||    
T  47923453 tcactgcct 47923445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 21711678 - 21711745
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    |||||| |||||||||||| ||||||||||| ||| ||||  ||||||| ||| ||||||||||||||    
T  21711678 gaaaattgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgaaaaccatgctcactgcct 21711745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 30709405 - 30709342
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcact 199  Q
    |||||| ||||||||||||  |||||||||| ||| |||| |||||||||||| ||||||||||    
T  30709405 gaaaattgtgtcacgttttctcaaaatcgtgacacgattgaacaccctgcaaaccatgctcact 30709342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 29812882 - 29812832
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||| | ||| |||||||||||||||||||||||||||||||    
T  29812882 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgacc 29812832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 37726111 - 37726203
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||  |||   ||||||||||||||| ||   |||||||||||||| ||| |||||||||||||    
T  37726111 gtacgaccaaccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaa 37726203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 33386324 - 33386233
Alignment:
Q  98 tacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||||||||||  |||| |||   ||||||||||||||| ||   |||||||||||||| ||| | |||||||||||    
T  33386324 tacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaa 33386233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 5260727 - 5260781
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||  ||||| ||||||||||||||    
T  5260727 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacg 5260781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 8127068 - 8127154
Alignment:
Q  98 tacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    ||||||||||||||| |||||||| | || || |||  ||||||||||||||  ||| ||||||||||| ||| ||||  |||||||    
T  8127068 tacgaccaaccttatcctgaaaacgtacctagcaagttgaaaatcgtgtcacactttcccaaaatcgtgacacgattgagcaccctg 8127154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 30709501 - 30709451
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||| | ||| ||||||||||||||| |||||||||||||||    
T  30709501 caaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacc 30709451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 24128245 - 24128212
Alignment:
Q  137 aaaatcgtgtcacgtttttccaaaatcgtgtcac 170  Q
    ||||||||||||||||||| ||||||||||||||    
T  24128245 aaaatcgtgtcacgtttttacaaaatcgtgtcac 24128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 1735914 - 1735847
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa-tcatgctcactgcct 203  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||||||| |||  ||||||||||||||    
T  1735914 gaaaatcgtgtcacgttttcccaaaatcgtg-cacgattgagcaccctgaaaagccatgctcactgcct 1735847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 34490811 - 34490783
Alignment:
Q  76 aaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||||||||||    
T  34490811 aaatcgtgacacgtttggtgcgtacgacc 34490783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 39032205 - 39032117
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    ||||||||||| |||| |||||||| | ||||| |||   |||||||||||||| |||| ||||||||||| ||| ||||  |||||||    
T  39032205 gtacgaccaactttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctg 39032117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 11197 - 10981
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac------------gac 103  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||            |||    
T  11197 atgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgac 11098  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||| |||||||||||||||| || |||||||||||||||| |||  ||||||||||||||| ||||||||||||||||| ||||||||| || |    
T  11097 caaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcat 10998  T
Q  204 tcaaaaatcatgacacg 220  Q
    |  |||||| |||||||    
T  10997 tgcaaaatcgtgacacg 10981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 4e-54; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 6655595 - 6655379
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac------------gac 103  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||            |||    
T  6655595 atgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaatgtacgac 6655496  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||| |||||||||||||||| || |||||||||||||||| |||  ||||||||||||||| ||||||||||||||||| ||||||||| || |    
T  6655495 caaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcat 6655396  T
Q  204 tcaaaaatcatgacacg 220  Q
    |  |||||| |||||||    
T  6655395 tgcaaaatcgtgacacg 6655379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 2209347 - 2209175
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattct 115  Q
    |||||||||||||||| ||||||||||||| |  | ||||||||  | ||| |||||||||||||||||| |||||||||||||||||||||||||| ||    
T  2209347 atgggtcaaagaatgcttatattgtgttcagattcagacaaaattttgtcacgatttcccaaatcgtgacgcgtttggtgcgtacgaccaaccttatcct 2209248  T
Q  116 gaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||| || || ||||||||||||||||||||  ||||||||||||||| ||||| ||| |||||||    
T  2209247 gaaaacttgcctagcaaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcactctgcaaa 2209175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 40630623 - 40630447
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgac 103  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||            |||||||    
T  40630623 atgggtcaaagaatgcatatattatgttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcatatgacccaaggtacgac 40630524  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||||||||||||||||  |||| || |||| ||||||||||||||||||| ||||||||||| ||| |||||||||    
T  40630523 caaccttattctgaaaatgtgcctagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgacacgattggacac 40630447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 50674375 - 50674551
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacg------------ac 103  Q
    |||||||||||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||||            ||    
T  50674375 atgggtcaaagaatgcatatattgtgttcagatccggacaaaattgtgtcatgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaac 50674474  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    ||||||||| |||||||| ||||||| |||| ||||||| ||||||||||| ||||||||||  ||| |||||||||    
T  50674475 caaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcacgttttcccaaaatcgtaacacgattggacac 50674551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 54882586 - 54882465
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||| ||||||||| |||||||| || |||  |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  54882586 gtacgatcaaccttatcctgaaaacgtgtccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaccatgctc 54882487  T
Q  197 actgccttcaaaaatcatgaca 218  Q
    |||||||||||||||| |||||    
T  54882486 actgccttcaaaaatcgtgaca 54882465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 26175985 - 26176119
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgttt 153  Q
    ||||||||| ||| | ||| | ||||| ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  26175985 caaaatcgtgtcacgttttgctaaatcatgacacgtttggtgcgtacgaccaaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttt 26176084  T
Q  154 ttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    | ||||||| |||||||  |||| |||||||||||    
T  26176085 tcccaaaattgtgtcacggttgggcaccctgcaaa 26176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 39 - 183
Target Start/End: Complemental strand, 26363881 - 26363725
Alignment:
Q  39 gtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aaccttattctgaaaacttgcc 126  Q
    ||||||| | |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||            |||||||| ||||||||||||     
T  26363881 gtgttcagatccggacaaaatcgtgtcacgatttcccaaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaacttgct 26363782  T
Q  127 cagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct 183  Q
    ||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  26363781 cagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 26363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 35662028 - 35661902
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgttt 153  Q
    |||||| |||||| | ||| ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| ||| |||    
T  35662028 caaaattgtatcacgttttgccaaatcgtgacacggttggtgcgtacgaccaaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattt 35661929  T
Q  154 ttccaaaatcgtgtcacaattggacac 180  Q
    | ||||||||||||||| |||||||||    
T  35661928 tcccaaaatcgtgtcacgattggacac 35661902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 9927867 - 9927971
Alignment:
Q  99 acgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcac 198  Q
    |||||||||||||| ||||||||||| |||| ||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||| |||| ||||    
T  9927867 acgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtgtcacgattgaacaccctgcaaaacatgttcac 9927966  T
Q  199 tgcct 203  Q
    |||||    
T  9927967 tgcct 9927971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 12739899 - 12740034
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtt 152  Q
    ||||||||| ||| | ||||| ||||| | ||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||| |||||    
T  12739899 caaaatcgtgtcacgttttccaaaatcataacacgattggtgcgtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgtt 12739998  T
Q  153 tttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    || ||||||||||||| |  ||||||||||||||||    
T  12739999 ttcccaaaatcgtgtcgcggttggacaccctgcaaa 12740034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 12745820 - 12745926
Alignment:
Q  97 gtacgaccaaccttattctg-aaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||||||||||| || || |||    
T  12745820 gtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcatgtcacgattggacaccctgccaaaca-gct 12745918  T
Q  196 cactgcct 203  Q
    ||||||||    
T  12745919 cactgcct 12745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 12748105 - 12748240
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtt 152  Q
    ||||||||| ||| | ||||| ||||| | ||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||| |||||    
T  12748105 caaaatcgtgtcacgttttccaaaatcataacacgattggtgcgtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgtt 12748204  T
Q  153 tttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    || ||||||||||||| |  ||||||||||||||||    
T  12748205 ttcccaaaatcgtgtcgcggttggacaccctgcaaa 12748240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 56179001 - 56179116
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtc 168  Q
    ||||||| |||||| |||| ||| ||||||||||||||||||| ||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||    
T  56179001 tttcccagatcgtgtcacgattgatgcgtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtc 56179100  T
Q  169 acaattggacaccctg 184  Q
    || ||||||| |||||    
T  56179101 acgattggacgccctg 56179116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 52095764 - 52095852
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  52095764 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg 52095852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 5370452 - 5370567
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtc 168  Q
    |||||| ||||||| |||| ||| ||||||||||||||||||| ||||||  ||||||||| ||||| |||||||||||||| ||| |||||||||||||    
T  5370452 tttccccaatcgtgccacgattgatgcgtacgaccaaccttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtc 5370551  T
Q  169 acaattggacaccctg 184  Q
    || ||||||| |||||    
T  5370552 acgattggacgccctg 5370567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 34570763 - 34570891
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aaccttattctgaaaacttgcccagtaagccgaaaat 141  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||||            |||||||| ||||||||||| |||| |||||||||||    
T  34570763 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaat 34570862  T
Q  142 cgtgtcacgtttttccaaaatcgtgtcac 170  Q
    ||||||||||||| |||||||||||||||    
T  34570863 cgtgtcacgttttcccaaaatcgtgtcac 34570891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 50263227 - 50263383
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc-----------gtacgacc 104  Q
    |||||||||||| ||| |||| |||||||| | || ||||||||||| ||| ||||||||||| |||||||| ||||||||           ||||||||    
T  50263227 atgggtcaaagagtgcttataatgtgttcagatccagacaaaatcgtgtcacgatttcccaaaccgtgacacatttggtgcgtacgaccaaggtacgacc 50263326  T
Q  105 aaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaa 161  Q
    ||||||||||||||||||| ||||  |||||||||||||||| ||||||| ||||||    
T  50263327 aaccttattctgaaaacttacccaccaagccgaaaatcgtgttacgttttcccaaaa 50263383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 46570148 - 46570237
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgca 186  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||| |||||||| |||||| ||||| |||||||||    
T  46570148 gtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatcttgtcacgattgggcaccctgca 46570237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 37740390 - 37740299
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||| |||||||||||| || ||||| |||||| ||||    
T  37740390 gtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaatcatgtcacgttttcccaaaatcgtgttacgattgggcaccctacaaa 37740299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 5429444 - 5429345
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||| ||||  ||||||||||| |||  |||| ||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||| |||||||    
T  5429444 gtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaatcgtatcacgttttcccaaaatcgtgtcacgattagacaccctgcaaaacatgctc 5429345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 41639111 - 41639028
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||||||||||||||| |||||||| ||||||  |||  ||||||||||||||||||||||||||||||||||| |||| ||||    
T  41639111 gtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattgaacac 41639028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 25861693 - 25861585
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgttttt-ccaaaatcgtgtcacaattggacaccctgcaaa-tcatgc 194  Q
    |||||||||||||||| |||||||| ||||||| |||  |||||||||||||||||||| ||||||||||| ||| ||||  ||||||| |||  |||||    
T  25861693 gtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaatcgtgtcacgtttttcccaaaatcgtgacacgattgagcaccctgaaaagccatgc 25861594  T
Q  195 tcactgcct 203  Q
    |||||||||    
T  25861593 tcactgcct 25861585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 36314890 - 36314812
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||| |||||||| ||||||| |||  ||||||||||||||||||| ||||||||||| ||| ||||    
T  36314890 gtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 36314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 36329099 - 36329021
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||| |||||||| ||||||| |||  ||||||||||||||||||| ||||||||||| ||| ||||    
T  36329099 gtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattg 36329021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 10047778 - 10047871
Alignment:
Q  74 ccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaag-ccgaaaatcgtgtcacgtttttccaaaatcgtg 166  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||  |||   | ||||||||||||||||| |||||||||||    
T  10047778 ccaaatcgtgacacgattggtgcgtacgaccaaccttatcctgaaaacgtacccatcaagtttgcaaatcgtgtcacgttttcccaaaatcgtg 10047871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 16628492 - 16628425
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| ||||||||||||||    
T  16628492 gaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaagcatgctcactgcct 16628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 27417480 - 27417656
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgac 103  Q
    ||||||||  || ||| ||||| ||||| | | |||||||||||||| ||| ||||||||||||||||||||| ||| |||            |||||||    
T  27417480 atgggtcatggagtgcttatatagtgtttagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacggttgatgcgtacgacccaaggtacgac 27417579  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    ||||||||| |||||| | |||| |  |||  ||||||||||||||||||| ||||||||||||||| |||| ||||    
T  27417580 caaccttatcctgaaaccgtgccgaacaagttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacac 27417656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 48142844 - 48142763
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||||||  ||||| ||||| ||||||||    
T  48142844 tttcccaaatcgtgtcacgattgatgcgtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaattgtgtcacg 48142763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 54200310 - 54200363
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  54200310 gtacgaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacg 54200363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 8689157 - 8689083
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcac 170  Q
    |||||||||||||||| |||||||| | ||||| |||   ||||||||||||||||||| |||||||||||||||    
T  8689157 gtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcac 8689083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 3778025 - 3778090
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgc 201  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| ||||||| ||||    
T  3778025 gaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcgctgc 3778090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 5148114 - 5148206
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| |||||||| |  ||||||||   ||||||||||||| |||||  |||||||||| ||| ||||| |||||||||||    
T  5148114 gtacgaccaaccttatcctgaaaacgtatccagtaagtttgaaaatcgtgtcaagttttcacaaaatcgtgccacgattggtcaccctgcaaa 5148206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 29254257 - 29254205
Alignment:
Q  98 tacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    ||||||||||||||||||||| |||||||||  |||||||||||| |||||||    
T  29254257 tacgaccaaccttattctgaatacttgcccaacaagccgaaaatcatgtcacg 29254205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 6743075 - 6742988
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| |||||||| ||||||  |||   |||||||||||||||||| |||||| |||| ||| ||| | |||||||    
T  6743075 gtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaatcgtgtcacgttttcccaaaaacgtgccacgattaggcaccctg 6742988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 256
Target Start/End: Complemental strand, 54882446 - 54882411
Alignment:
Q  221 acgtttcttcactttctccaaaatcatttttgaggc 256  Q
    ||||||||||||||||||||||||||||||||||||    
T  54882446 acgtttcttcactttctccaaaatcatttttgaggc 54882411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 5429499 - 5429449
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||||| ||||||| ||||||||||| |||||||||||||||    
T  5429499 caaaatcgtgtcatgttttcccacatcgtgacacgattggtgcgtacgacc 5429449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 9927826 - 9927860
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||||||||||||||||    
T  9927826 tttcccaaatcgtgacacgtttggtgcgtacgacc 9927860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 54867616 - 54867694
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||| |  ||||| ||||||| |||  ||||||||||||||||||| ||||||| ||| ||| ||||    
T  54867616 gtacgaccaaccttatccgaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaattgtgacacgattg 54867694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 55085934 - 55086027
Alignment:
Q  76 aaatcgtgacacgtttggtgcgtacgaccaacc-ttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtca 169  Q
    ||||||||||||| ||| ||||||||||||||| |||| |||||| | |||| || | ||| ||||||||| |||| |||||| |||||||||||    
T  55085934 aaatcgtgacacggttgatgcgtacgaccaacctttatcctgaaagcgtgccaagcatgcccaaaatcgtgccacg-ttttcccaaatcgtgtca 55086027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 3909860 - 3909760
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| || ||||| |||| |  | ||| ||||| |||||| ||||| | ||||||||||||| ||| |||||| |||||| |||||||    
T  3909860 gtacgaccaaccttat-cttaaaacgtgccaaacatgccaaaaatagtgtcatgttttccaaaaatcgtgtcacgatttgacaccgtgcaaaacatgctc 3909762  T
Q  197 ac 198  Q
    ||    
T  3909761 ac 3909760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 5268860 - 5268772
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| |||||||| | ||||  |||   ||||||||||||||||||| ||||||||||| ||| ||||  |||||||    
T  5268860 gtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctg 5268772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 13992731 - 13992783
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| ||||||||||||||| ||| | |||||||||||    
T  13992731 gaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaa 13992783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 28468125 - 28468073
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| |||||||| |||||||||| ||| | |||||||||||    
T  28468125 gaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaa 28468073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 29254313 - 29254265
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacga 102  Q
    ||||||||| ||| | ||| |||||||||||||||||||||||||||||    
T  29254313 caaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacga 29254265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 3754736 - 3754685
Alignment:
Q  137 aaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||| |||||  |||||||||| ||||||| ||||||||||||    
T  3754736 aaaatcgtgtcacatttttttaaaatcgtgttacaattgtacaccctgcaaa 3754685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 5396311 - 5396272
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  5396311 gaaaatcgtgtcacgtttttccaaaatcgtgacacgattg 5396272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 16622913 - 16622850
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcact 199  Q
    ||||||||||||||||||| ||||||| ||| ||||||||  |||  |||||| ||||||||||    
T  16622913 gaaaatcgtgtcacgttttcccaaaattgtgacacaattgagcacaatgcaaaccatgctcact 16622850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 36994324 - 36994241
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||||| |||||||||   |||||| |||| || ||||||||||| ||| |||||||| | ||||| ||||||| |||||||||    
T  36994324 gtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttccaaaaattgtgtcacgattggacac 36994241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 30000877 - 30000931
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| || |||| ||||||||| ||||| ||||||||||||||    
T  30000877 gtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 30000931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 48142859 - 48142822
Alignment:
Q  138 aaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  48142859 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 48142822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 52083007 - 52083044
Alignment:
Q  138 aaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  52083007 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 52083044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 52094014 - 52094051
Alignment:
Q  138 aaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  52094014 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 52094051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 41639181 - 41639133
Alignment:
Q  39 gtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacac 87  Q
    ||||||| | || ||||||||||| ||||| ||||||||||||||||||    
T  41639181 gtgttcagatccagacaaaatcgtgtcatggtttcccaaatcgtgacac 41639133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 268
Target Start/End: Complemental strand, 193251 - 192971
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc----------- 104  Q
    |||||||||||||| | ||||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||               
T  193251 atgggtcaaagaatacttatattgtgttcagatccggacaaaatcgtgtcacgatttcccaaatcgcgacacgtttggtgcgtacgacccaaggtacgac 193152  T
Q  105 -aaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
     || ||||| || ||||||||||||| ||||||||||| || ||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||||    
T  193151 caatcttatcctaaaaacttgcccagcaagccgaaaatggtatcacgtttttccaaaattgtgtcatgattggacaccctgcaaaccatgctcactgcct 193052  T
Q  204 tcaaaaatcatgacacg----------------acgtttcttcactttctccaaaatcatttttgaggcgctttgcaacaa 268  Q
    ||||||||| |||||||                |||||||||||||||||||||||||||||||||| | |||||||||||    
T  193051 tcaaaaatcgtgacacgattgccaaatcatgtcacgtttcttcactttctccaaaatcatttttgagacactttgcaacaa 192971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 37033600 - 37033792
Alignment:
Q  18 gggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacg------------acca 105  Q
    |||||||||||||| ||||||||||||| | ||||||||||| || ||| ||||||||||||||||||||||||||||||||||            ||||    
T  37033600 gggtcaaagaatgcttatattgtgttcagatccggacaaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaacca 37033699  T
Q  106 accttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcac 198  Q
    ||||||| |||||||||||||| | ||| |||||||||||||| ||||  | ||||||||||||| ||||||||||||||||| |||||||||    
T  37033700 accttatcctgaaaacttgccctgcaaggcgaaaatcgtgtcatgtttcccgaaaatcgtgtcacgattggacaccctgcaaaacatgctcac 37033792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 11348265 - 11348174
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  11348265 gtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatcgtgtcacgattagacaccctgcaaa 11348174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 37879513 - 37879604
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| || |||||||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||  |||||||||||    
T  37879513 gtacgaccaaccttatcctaaaaacttgtccagtaagctgaaaatcgtgtcacatttttccaaaatcgtgtcacgattgagcaccctgcaaa 37879604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 44454923 - 44454840
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  44454923 gtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattggacac 44454840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 10924983 - 10924896
Alignment:
Q  101 gaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||| ||||| |||||||||||| |  ||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||    
T  10924983 gaccaactttattttgaaaacttgcctaccaagccgaaaatcgtgtcacatttttccaaaatcgtgtcacgattgggtaccctgcaaa 10924896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 31659002 - 31658911
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||| ||||||||||| |||||||||| ||||| ||||  ||||| |||||||||||| ||||||||||||||| ||||| |||||||||||    
T  31659002 gtacaaccaaccttatcctgaaaactttcccagcaagcaaaaaattgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 31658911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 49918109 - 49918022
Alignment:
Q  101 gaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||| |||||||| ||||||| |||   |||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  49918109 gaccaaccttatcctgaaaacgtgcccagcaagttaaaaatcgtgtcacgtttttcgaaaatcgtgtcacgattgggcaccctgcaaa 49918022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 20762436 - 20762348
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||  ||||| |||||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  20762436 gtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg 20762348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 28220665 - 28220737
Alignment:
Q  131 aagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatca-tgctcactgcc 202  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| || |||||||||||    
T  28220665 aagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaaacagtgctcactgcc 28220737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 3189113 - 3189027
Alignment:
Q  99 acgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||| || |||| ||||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  3189113 acgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacgccctg 3189027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 3197930 - 3197844
Alignment:
Q  99 acgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||| || |||| ||||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  3197930 acgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacgccctg 3197844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 3206748 - 3206662
Alignment:
Q  99 acgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||| || |||| ||||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  3206748 acgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacgccctg 3206662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 28223860 - 28223917
Alignment:
Q  131 aagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  28223860 aagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28223917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 13547618 - 13547706
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||| ||||||||| | ||||||| | ||||  |||||||| | ||| ||||||||||||||||||| |||||||||||||||    
T  13547618 atgggtcaaaaaatgcatatgtagtgttcagatccgggtaaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacc 13547706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 13549529 - 13549617
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||| ||||||||| | ||||||| | ||||  |||||||| | ||| ||||||||||||||||||| |||||||||||||||    
T  13549529 atgggtcaaaaaatgcatatgtagtgttcagatccgggtaaaatcgtgttatgttttcccaaatcgtgacacggttggtgcgtacgacc 13549617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 3156631 - 3156540
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| |||||||| || |||| || || |||||||||| | ||||| ||||||||||||||| ||| | |||||||||||    
T  3156631 gtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatttggcaccctgcaaa 3156540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 37879440 - 37879486
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgt 62  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||    
T  37879440 atgggtcaaagaatgcatatattgtgttcagatccggacaaaatcgt 37879486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 4553053 - 4553153
Alignment:
Q  98 tacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctca 197  Q
    |||||| |||||||| |||||||| || | |  ||| |||||||| | |||||||||  |||||||||||||| |||||| |||||||||| |||| |||    
T  4553053 tacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaatcatatcacgttttctcaaaatcgtgtcacgattggataccctgcaaaacatgttca 4553152  T
Q  198 c 198  Q
    |    
T  4553153 c 4553153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 30476797 - 30476905
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacg------------accaaccttattctgaaaacttgcccagtaagccgaaaat 141  Q
    ||||||||| ||| | |||||||||||||||||||||||||| |||||            |||||||||||  ||||||||||||||| || ||||||||    
T  30476797 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaat 30476896  T
Q  142 cgtgtcacg 150  Q
    |||||||||    
T  30476897 cgtgtcacg 30476905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 13316722 - 13316776
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  13316722 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 13316776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 29135887 - 29135841
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgt 62  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||    
T  29135887 atgggtcaaagaatgcttatattgtgttcagatccggacaaaatcgt 29135841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 29135814 - 29135762
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcac 149  Q
    |||||||||||||||| |||||||| ||||||| |||| ||||||| ||||||    
T  29135814 gtacgaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcac 29135762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 29652307 - 29652359
Alignment:
Q  151 tttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    |||||||||||||||| ||| ||||  ||||||||||| ||||||||||||||    
T  29652307 tttttccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgcct 29652359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 1833341 - 1833295
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac 100  Q
    ||||||||| ||| | |||| ||||||||||||||||||||||||||    
T  1833341 caaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtac 1833295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 104
Target Start/End: Complemental strand, 31659037 - 31659007
Alignment:
Q  74 ccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||||||||||||    
T  31659037 ccaaatcgtgacacgtttggtgcgtacgacc 31659007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 1833251 - 1833194
Alignment:
Q  131 aagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||| |||||||||| | ||||| ||||||||||||||| ||||||||  |||||||    
T  1833251 aagccaaaaatcgtgttatgttttcccaaaatcgtgtcaccattggacaatctgcaaa 1833194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 13547711 - 13547763
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    ||||||||||||||||| ||||||| ||||||| |||| |||||| ||||||||    
T  13547711 gtacgaccaaccttatt-tgaaaacgtgcccagcaagctgaaaattgtgtcacg 13547763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 13549622 - 13549674
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    ||||||||||||||||| ||||||| ||||||| |||| |||||| ||||||||    
T  13549622 gtacgaccaaccttatt-tgaaaacgtgcccagcaagctgaaaattgtgtcacg 13549674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 30476892 - 30476937
Alignment:
Q  158 aaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||| ||| ||||||||||||| ||||| ||||||||    
T  30476892 aaaatcgtgtcacgattagacaccctgcaaaacatgcccactgcct 30476937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 13604283 - 13604191
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaag-ccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||| |||   ||||||| ||||||| ||   |||||||||||||| ||| ||||| |||||||    
T  13604283 gtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaa 13604191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 19361060 - 19361008
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| |||| |||||||||| ||| | |||||||||||    
T  19361060 gaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 19361008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 19365916 - 19365864
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| |||| |||||||||| ||| | |||||||||||    
T  19365916 gaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 19365864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 26644521 - 26644469
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||||||  |||||||||| ||| ||| |||||| ||||||    
T  26644521 gaaaatcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaa 26644469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 29135847 - 29135819
Alignment:
Q  76 aaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||||||||||    
T  29135847 aaatcgtgacacgtttggtgcgtacgacc 29135819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 9e-52; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 42435520 - 42435736
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac------------gac 103  Q
    |||||||||||||||||||||||||||||| | |||||||||||| | ||| |||||||||||||||||||||||||||||||||            |||    
T  42435520 atgggtcaaagaatgcatatattgtgttcagaaccggacaaaatcatgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgac 42435619  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||| ||||||||||||| || ||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||| || |    
T  42435620 caaccttatcctgaaaacttgccaagcaagacgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattggacaccctgcaaaacatgctcacggcat 42435719  T
Q  204 tcaaaaatcatgacacg 220  Q
    |  |||||| |||||||    
T  42435720 tgcaaaatcgtgacacg 42435736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 15212550 - 15212443
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgc-aaatcatgct 195  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||    
T  15212550 gtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 15212451  T
Q  196 cactgcct 203  Q
    ||||||||    
T  15212450 cactgcct 15212443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 198
Target Start/End: Complemental strand, 43036242 - 43036086
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aaccttattctgaaaacttgcccagtaagccgaaaat 141  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||| |            |||||||| |||||||||||||||  ||| |||||||    
T  43036242 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaat 43036143  T
Q  142 cgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcac 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  43036142 cgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaaacatgctcac 43036086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 30143106 - 30143005
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| || |||||||| |||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||    
T  30143106 gtacgaccaaccttatccttaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaatcgtgtcacgattggacaccctgcaaaacatgctc 30143007  T
Q  197 ac 198  Q
    ||    
T  30143006 ac 30143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 11383552 - 11383449
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||||||||||||  |||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  11383552 gtacgaccaaccttatcttgaaaatttgcccagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacaattggacaccctaaaaaccatgctc 11383453  T
Q  197 actg 200  Q
    ||||    
T  11383452 actg 11383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 27811061 - 27810971
Alignment:
Q  98 tacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||||    
T  27811061 tacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctcaaaatcgtgtcacgattggacaccctgcaaa 27810971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 22976080 - 22975974
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||| |||||||| ||||||||||| | || |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||||| |    
T  22976080 gtacgacaaaccttatcctgaaaacttgtcaagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaaccatgccc 22975981  T
Q  197 actgcct 203  Q
    |||||||    
T  22975980 actgcct 22975974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 4283185 - 4283039
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgac 103  Q
    |||||||||||||||| | ||||||||||| | ||| ||||||| || ||| ||||||||||||| | |||||||||||||            |||||||    
T  4283185 atgggtcaaagaatgcttgtattgtgttcagatccgaacaaaatggtgtcacgatttcccaaatcctaacacgtttggtgcatacgacccaaggtacgac 4283086  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  4283085 caaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacg 4283039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 4731422 - 4731335
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||| |||||||||||||| || |||| |||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||    
T  4731422 gtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaatcatgtcatgttttcccaaaatcgtgtcacgattggacaccctg 4731335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 1746622 - 1746710
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  1746622 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg 1746710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 12703043 - 12703126
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||||||||||||||| |||||| |||||  || |||| ||||||||||||||||||| ||||||||||||||| |||||||||    
T  12703043 gtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacac 12703126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 4743597 - 4743699
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| ||||||| | |||| || ||| |||||||||||||||||||   |||||||||||||| |||||||||||| |||| ||||||    
T  4743597 gtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacgtttcctcaaaatcgtgtcacgattggacacccttcaaaacatgct 4743696  T
Q  196 cac 198  Q
    |||    
T  4743697 cac 4743699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 31218021 - 31217933
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| || |||| ||||||||  ||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  31218021 gtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacaattggacgccctg 31217933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 4733555 - 4733502
Alignment:
Q  131 aagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  4733555 aagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctg 4733502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 10014923 - 10014822
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| ||| |||| |||| || | ||| |||||||||||| | ||  ||||||||||||||| |||||| |||||| ||| |||||||    
T  10014923 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 10014824  T
Q  197 ac 198  Q
    ||    
T  10014823 ac 10014822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 34254732 - 34254805
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtca 169  Q
    |||||||||||||||| ||||||| ||||||||| || || |||||||||||||| ||| ||||||||||||||    
T  34254732 gtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaatcgtgtcacgatttcccaaaatcgtgtca 34254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 40221308 - 40221227
Alignment:
Q  99 acgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    ||||| |||||||| |||||||| || |||  |||| ||||||||||||||||||| ||||||||||| ||| |||||||||    
T  40221308 acgacaaaccttatcctgaaaacgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaatcgtgacacgattggacac 40221227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 5702140 - 5702048
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| |||||||  | ||||| |||   ||||||||||||||||||||||||||||||| ||| ||||  |||||||||||    
T  5702140 gtacgaccaaccttatcctgaaaatgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaa 5702048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 34256908 - 34256996
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||| ||||| ||||| ||||||| ||||| ||| ||||| |||||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  34256908 gtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg 34256996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 42497979 - 42497891
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    ||||||| |||||||| ||||||| ||||||||| ||||| | |||||||||||  ||| ||||||||||||||| ||||||| |||||    
T  42497979 gtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacgattggacgccctg 42497891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 1345775 - 1345895
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||| || | || |||| |||||| |||||||  |||||  |||||||||||| |||| |||||||||| | |||||||    
T  1345775 gtacgaccaaccttatcctgaaaacgtgtcaagcaagctgaaaattgtgtcac-attttctcaaatcgtgtcacgattgaacaccctgcagaacatgctc 1345873  T
Q  197 actgccttcaaaaatcatgaca 218  Q
     | || ||  ||||||||||||    
T  1345874 tcggcattgcaaaatcatgaca 1345895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 19945743 - 19945831
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||| ||||||||| ||||||| ||| ||||  ||||| |||||||||||||| ||| | ||||||||||||| ||||||| |||||    
T  19945743 gtacgatcaaccttatcctgaaaatcttccccaacaagccaaaaatcgtgtcacgatttcctaaaatcgtgtcacgattggacgccctg 19945831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 33351888 - 33351812
Alignment:
Q  144 tgtcacgtttttccaaaatcgtgtcacaattggacaccctgc-aaatcatgctcactgccttcaaaaatcatgacacg 220  Q
    ||||| ||||| ||||||||||||||| |||||||||||||| ||| |||| |||||||| | ||||||| |||||||    
T  33351888 tgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgttcactgcc-taaaaaatcgtgacacg 33351812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 15212589 - 15212555
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||| |||||||||||||||||||||||||||||    
T  15212589 tttcctaaatcgtgacacgtttggtgcgtacgacc 15212555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 17982417 - 17982363
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| || |||| ||||||||| ||||| ||||||||||||||    
T  17982417 gtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 17982363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 30143161 - 30143111
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||| | ||| ||||||||||||||| |||||||||||||||    
T  30143161 caaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgacc 30143111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 33351969 - 33351919
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||| | ||||||||||| |||||||||||||||||| ||||    
T  33351969 caaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacc 33351919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 40221383 - 40221337
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgt 62  Q
    |||||||||||||||| ||||||||||||| | ||| ||||||||||    
T  40221383 atgggtcaaagaatgcttatattgtgttcagatccgaacaaaatcgt 40221337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 44303618 - 44303564
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||| ||| ||||||||| ||||| ||||||||||||||    
T  44303618 gtacgaccaaccttatcctggaaatcttgcccagcaagccaaaaatcgtgtcacg 44303564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 1261562 - 1261510
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| |||| |||||||||| ||| | |||||||||||    
T  1261562 gaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 1261510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 104
Target Start/End: Complemental strand, 40221343 - 40221315
Alignment:
Q  76 aaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||||||||||    
T  40221343 aaatcgtgacacgtttggtgcgtacgacc 40221315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 9e-52; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 29608382 - 29608207
Alignment:
Q  14 atatgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttatt 113  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||     
T  29608382 atatgggtcaaagaatgcttatattgtgttcagatccggacaaaatcgtgtcatgatttcctaaattgtgacacgtttggtgcgtacgaccaaccttatc 29608283  T
Q  114 ctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttcc-aaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||  ||| ||||||| || |||| |||  || ||||||||||||| |||||||||||||||||    
T  29608282 ctgaaaacttgcccaacaagtcgaaaattgtatcacttttccccaaaaatcgtgtcacgattggacaccctgcaaa 29608207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 6360441 - 6360625
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc----------- 104  Q
    |||||||||||||||| |||| |||||||| | |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||               
T  6360441 atgggtcaaagaatgcttataatgtgttcagatccggacaaaatcgtgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgac 6360540  T
Q  105 -aaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
     ||| |||| |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  6360541 caacattatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacaattgggcaccctgcaaa 6360625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 47674347 - 47674454
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgc-aaatcatgct 195  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||    
T  47674347 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 47674446  T
Q  196 cactgcct 203  Q
    ||||||||    
T  47674447 cactgcct 47674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 47676540 - 47676647
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgc-aaatcatgct 195  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||    
T  47676540 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 47676639  T
Q  196 cactgcct 203  Q
    ||||||||    
T  47676640 cactgcct 47676647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 31733311 - 31733410
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgttt 153  Q
    ||||||||| ||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  31733311 caaaatcgtgtcacgttttcccaaatcgttacacgtttggtgcgtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaattgtgtcacgttt 31733410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 14070182 - 14070350
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaa 140  Q
    ||||||||| ||| | |||||||||||||||||||||||||||            ||||||||||||||||  |||||| |||||| || ||| ||||||    
T  14070182 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14070281  T
Q  141 tcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgccttcaaaa 209  Q
    |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||||||||||| ||||    
T  14070282 tcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgaaaaccatgctcactgccttgaaaa 14070350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 14380210 - 14380378
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaa 140  Q
    ||||||||| ||| | |||||||||||||||||||||||||||            ||||||||||||||||  |||||| |||||| || ||| ||||||    
T  14380210 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaa 14380309  T
Q  141 tcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgccttcaaaa 209  Q
    |||||||||||||| ||||||||||||||| |||| |||||||| ||| ||||||||||||||| ||||    
T  14380310 tcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgaaaaccatgctcactgccttgaaaa 14380378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 27347687 - 27347581
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatca-tgct 195  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||| ||||||||||| || ||||    
T  27347687 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtca-gttttcccaaaatcgtgtcacgattgggcaccctgcaaaacagtgct 27347589  T
Q  196 cactgcct 203  Q
    ||||||||    
T  27347588 cactgcct 27347581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 4585925 - 4585819
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||||||||||||  ||||||||| ||||  ||||| |||||| ||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  4585925 gtacgaccaaccttatattgaaaacttacccaacaagccaaaaatcttgtcacgttttcccaaaatagtgtcacgattggacaccctgcaaaacatgctc 4585826  T
Q  197 actgcct 203  Q
    |||||||    
T  4585825 actgcct 4585819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 23554804 - 23554716
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  23554804 gtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg 23554716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 18126408 - 18126318
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||| |||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  18126408 gtacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtatcacgtttttccaaaatcgtg-cacgattggacaccctgcaaa 18126318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 200
Target Start/End: Complemental strand, 2389838 - 2389735
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||| | ||||| |||| |||||||||||||| ||||  |||||||||||||| ||||||||||||  ||| |||||||    
T  2389838 gtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatcgtgtcacgattggacaccctaaaaaccatgctc 2389739  T
Q  197 actg 200  Q
    ||||    
T  2389738 actg 2389735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 32358388 - 32358564
Alignment:
Q  39 gtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aaccttattctgaaaacttgcc 126  Q
    ||||||| | |||||||||||||| |||  |||| ||||||| ||||||||||||||||||||| |            ||| |||| |||||||| ||||    
T  32358388 gtgttcagatccggacaaaatcgtgtcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcc 32358487  T
Q  127 cagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||| |||| |||||| |||||||||||| |||||||||| |||| |||||| |||||| ||| ||||||||||||||    
T  32358488 cagcaagctgaaaattgtgtcacgttttcccaaaatcgtatcacgattggataccctgaaaaccatgctcactgcct 32358564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 48599853 - 48599933
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc 96  Q
    |||||| ||||||||||||||||||||||| |  |||||||||| || |||||||||||| ||||||||||||||||||||    
T  48599853 atgggtaaaagaatgcatatattgtgttcagattcggacaaaattgtgtcatgatttccccaatcgtgacacgtttggtgc 48599933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 43864025 - 43863942
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||||||||||||||| |||||||||| || |  || ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  43864025 gtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacac 43863942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 33332110 - 33331987
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct-gcaaatcatgct 195  Q
    ||||||||||||||||  ||||||  ||||||| |||  ||||||||||||||||||||||||||||||| ||||||||  ||||||   ||| ||||||    
T  33332110 gtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaatcgtgtcacgtttttccaaaatcgtgacacaattgagcaccctaaaaaaccatgct 33332011  T
Q  196 cactgccttcaaaaatcatgacacg 220  Q
    ||||||| | ||||||| |||||||    
T  33332010 cactgcc-taaaaaatcgtgacacg 33331987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 4538955 - 4539046
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||| | ||||||||||||  || || ||||||||||||||||||||| ||||||||||||||| ||| | |||||| ||||    
T  4538955 gtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattaggcacccttcaaa 4539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 4796329 - 4796238
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||  ||| |||||||| ||||||  |||  ||||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  4796329 gtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaatcgtgtcacgtttttccaaaatcgtgtcacgattgagcaccctgcaaa 4796238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 19495735 - 19495646
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaa-tcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||| ||||| |||||||| ||||||| ||||||| |||||||||||||    
T  19495735 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtggcacgttttcccaaaattgtgtcacgattggacaccctg 19495646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 4178539 - 4178451
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| |||||| |  ||||| |||||||||||||| ||| ||||||||||||||| ||||||| |||||    
T  4178539 gtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg 4178451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 2361540 - 2361635
Alignment:
Q  76 aaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccg-aaaatcgtgtcacgtttttccaaaatcgtgtcac 170  Q
    ||||||||||||||||||||| ||||||||||||||| || |||| ||| |||| ||  || ||||| |||||||||||  |||||||||||||||    
T  2361540 aaatcgtgacacgtttggtgcatacgaccaaccttatcctaaaaatttgtccagcaaatcgaaaaattgtgtcacgtttccccaaaatcgtgtcac 2361635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 2647357 - 2647288
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtg 166  Q
    |||||||||||||||| |||||||| ||||||| |||  ||||||| ||||||||||| |||||||||||    
T  2647357 gtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcatgtcacgttttcccaaaatcgtg 2647288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 49092127 - 49092232
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagc-cgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgc 194  Q
    |||||||||||||||| ||||||| | | ||||| |||  ||||||||||||||| |||| ||||||||||| ||| ||||  ||||||||||| |||||    
T  49092127 gtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctgcaaaccatgc 49092226  T
Q  195 tcactg 200  Q
    ||||||    
T  49092227 tcactg 49092232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 2761651 - 2761759
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaat 141  Q
    ||||||||| ||| | |||||||||||||||||||||||||||            |||||||||| ||||| |||||||||||||||| |||| ||||||    
T  2761651 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaat 2761750  T
Q  142 cgtgtcacg 150  Q
    |||||||||    
T  2761751 cgtgtcacg 2761759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 26417077 - 26416994
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    |||||||||||||||  ||||||||||| |||  || |  ||||||||||||| |||  |||||||||||||||||||||||||    
T  26417077 gtacgaccaaccttaccctgaaaacttgtccaacaaactaaaaatcgtgtcacatttccccaaaatcgtgtcacaattggacac 26416994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 48489190 - 48489103
Alignment:
Q  101 gaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||| ||| || | ||||||| ||||| |||| ||||||||||||| || ||||||||||||  ||| ||||||||||||    
T  48489190 gaccaaccttatcctggaagcatgcccagcaagccaaaaaccgtgtcacgttttccctaaatcgtgtcacggttgaacaccctgcaaa 48489103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 18126463 - 18126413
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||| | |||| ||||||||||||||||||||||||||||||    
T  18126463 caaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgacc 18126413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 30026404 - 30026481
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||| |||||| | ||||| | |||| ||||||||||||||||||  |||||||| |||||| ||||    
T  30026404 gtacgaccaaccttatcctgaaa-cgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacgattg 30026481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 1113420 - 1113367
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| |||||||  | ||||||||||||||||||    
T  1113420 gtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaatcgtgtcacg 1113367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 34311285 - 34311330
Alignment:
Q  158 aaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||    
T  34311285 aaaatcgtgtcatgattggacaccctgcaaaccatgctcactgcct 34311330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 48599934 - 48599991
Alignment:
Q  131 aagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||||  |||||||||||    
T  48599934 aagccgaaaatcgtgtcacgtttccccataatcgtgtcacgattgtgcaccctgcaaa 48599991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 79826 - 79933
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgc 194  Q
    |||||||||||||||| ||||||| | | ||||| |||   ||||||| |||||| |||||||||||||||| ||| ||||  || |||||||| |||||    
T  79826 gtacgaccaaccttatcctgaaaaacgtacccagcaagtttgaaaatcttgtcacatttttccaaaatcgtgacacgattgagca-cctgcaaaccatgc 79924  T
Q  195 tcactgcct 203  Q
    |||||||||    
T  79925 tcactgcct 79933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 21646495 - 21646547
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| |||||||| |||||||||| ||| | |||||||||||    
T  21646495 gaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaa 21646547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 25767398 - 25767450
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| ||||||||||||||| ||| | |||||||||||    
T  25767398 gaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaa 25767450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 2389911 - 2389865
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgt 62  Q
    |||||||||||||||| || |||||||||| | ||||||||||||||    
T  2389911 atgggtcaaagaatgcttacattgtgttcagatccggacaaaatcgt 2389865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 2647412 - 2647362
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||||||| | ||  ||||||||||||||| |||||||||||||||    
T  2647412 caaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacc 2647362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 4585964 - 4585930
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||||||||||| |||||||||||||||||    
T  4585964 tttcccaaatcgtgacatgtttggtgcgtacgacc 4585930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 24515164 - 24515218
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||| ||||||||    
T  24515164 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaattgtgtcacg 24515218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 26417132 - 26417082
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||| ||||  ||||||||||||||| |||||||||||||||    
T  26417132 caaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgacc 26417082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 27347726 - 27347692
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| |||||||||||||||||||||||||    
T  27347726 tttcccaaaccgtgacacgtttggtgcgtacgacc 27347692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 80812 - 81011
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtac------------gac 103  Q
    |||||| ||||||||| ||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||            |||    
T  80812 atgggtgaaagaatgcttatattgtgttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgac 80911  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| |||||| |||||| |||  |||||||||||||    
T  80912 caaccttatcctgaaaacttgcccagcaagccgaaaatcgtgccacgttttcccaaaatcgtgtcacgattggataccctgaaaacaatgctcactgcct 81011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 42428779 - 42428913
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgttt 153  Q
    ||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||    
T  42428779 caaaatcgtgtcaggttttcctaaatcgtgacacgtttggtgcgtacgaccaaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttt 42428878  T
Q  154 ttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    | ||||||||||||||| |||||||||||||||||    
T  42428879 tcccaaaatcgtgtcacgattggacaccctgcaaa 42428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 533588 - 533492
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  533588 caaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaaccgtgtcacg 533492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 42426639 - 42426745
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgc-aaatcatgct 195  Q
    |||||||||||||||| |||||||||||||||| || |||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||    
T  42426639 gtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 42426738  T
Q  196 cactgcc 202  Q
    |||||||    
T  42426739 cactgcc 42426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 27015169 - 27015083
Alignment:
Q  18 gggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||| ||||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27015169 gggtcatagaatgcatatattgtgttcagatccggacaaaatcgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacc 27015083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 38746640 - 38746556
Alignment:
Q  20 gtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  38746640 gtcaaagaatgcatatattgtgttcagatccgaacaaaatcgtgtcatgatttcccaaattgtgacacgtttggtgcgtacgacc 38746556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 30683268 - 30683395
Alignment:
Q  54 caaaatcgtatcatgatttcccaaa-tcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtt 152  Q
    ||||||||| ||| | ||||||||| | ||| |||| ||| ||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||||||    
T  30683268 caaaatcgtgtcacgttttcccaaaattgtgtcacgattgatgcgtacgaccaaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgtt 30683367  T
Q  153 tttccaaaatcgtgtcacaattggacac 180  Q
    || ||||||| ||||||| |||||||||    
T  30683368 ttcccaaaattgtgtcacgattggacac 30683395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 32636588 - 32636481
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| ||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||||||||| |||||||||| |||||| |||| |    
T  32636588 gtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgccacgttttcccaaaatcgtgtcacgattggacaccttgcaaaacatgtt 32636489  T
Q  196 cactgcct 203  Q
    ||||||||    
T  32636488 cactgcct 32636481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 5057595 - 5057489
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||||||| ||  ||| ||||||| |||||||||||| ||||||||||||||| ||||||||||||| |||  ||||||    
T  5057595 gtacgaccaaccttatcctgaaaacttgctcaacaagtcgaaaattgtgtcacgttttaccaaaatcgtgtcacgattggacaccctgaaaactatgctc 5057496  T
Q  197 actgcct 203  Q
    | |||||    
T  5057495 attgcct 5057489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 37438910 - 37438797
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    ||||||| |||||||| ||||||| ||||||||  ||||| |||||||||||||||||| |||||||| |||||| ||||||||| ||| ||| ||||||    
T  37438910 gtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcatgtcacgattggacactctgaaaaccatgct 37438811  T
Q  196 cactgccttcaaaa 209  Q
    ||||||||| ||||    
T  37438810 cactgccttgaaaa 37438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 38746535 - 38746451
Alignment:
Q  96 cgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||  ||||||| |||| ||||    
T  38746535 cgtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacgattgaacac 38746451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 213068 - 212942
Alignment:
Q  137 aaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgccttcaaaaatcatgacacgacgtttcttcactttc 236  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||||| |||||||||| || |  |||||| || |||||   ||||||||||||    
T  213068 aaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgcaaaccatgctcactacc-tagaaaatcgtgtcacga---ttcttcactttc 212973  T
Q  237 tccaaaatcatttttgaggcgctttgcaaca 267  Q
    || |   ||||||| ||||| ||||||||||    
T  212972 tcaatcttcattttagaggcactttgcaaca 212942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 13487967 - 13487864
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||    ||||| ||||||||||||||| ||||  ||||||| |||  ||||||    
T  13487967 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtg--ctgttttcccaaaatcgtgtcacgattgagcaccctgaaaaatatgctc 13487870  T
Q  197 actgcc 202  Q
    | ||||    
T  13487869 attgcc 13487864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 40146813 - 40146707
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||||||| || | |||||||| || |||  |||| |||||||| ||||| |||| ||||||||||||||| ||||||||||||| ||| |||| ||    
T  40146813 gtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacgattggacaccctgaaaaccatgttc 40146714  T
Q  197 actgcct 203  Q
    |||||||    
T  40146713 actgcct 40146707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 13239516 - 13239430
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct 183  Q
    |||||||||||||||| ||||||||||| |||| ||| | || ||||||||||||||  |||||||| |||||| |||| |||||||    
T  13239516 gtacgaccaaccttatcctgaaaacttgtccagcaagtcaaagatcgtgtcacgtttacccaaaatcttgtcacgattgaacaccct 13239430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 535667 - 535614
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  535667 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacg 535614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 12083838 - 12083731
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| |||||||| | ||||  |||   ||||||||||||||||||| ||||||  ||| ||||||||  ||||||| ||| ||||||    
T  12083838 gtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaactgtgacacaattgagcaccctgtaaaccatgct 12083739  T
Q  196 cactgcct 203  Q
    ||||||||    
T  12083738 cactgcct 12083731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 5057665 - 5057598
Alignment:
Q  39 gtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaa 106  Q
    ||||||| | |||||||||||||| ||| | |||||||||| |||||||| ||| |||||||||||||    
T  5057665 gtgttcagatccggacaaaatcgtgtcacgttttcccaaattgtgacacggttgatgcgtacgaccaa 5057598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 11916592 - 11916525
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| ||  ||||||||||    
T  11916592 gaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccacactcactgcct 11916525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 13342825 - 13342771
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  13342825 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 13342771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 13488006 - 13487972
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||||||||||||||||    
T  13488006 tttcccaaatcgtgacacgtttggtgcgtacgacc 13487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 19806225 - 19806175
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||| | |||||||| ||||||||||||||||||||||||||    
T  19806225 caaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgacc 19806175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 25412526 - 25412472
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  25412526 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 25412472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 28751027 - 28751077
Alignment:
Q  138 aaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||||||||    
T  28751027 aaattgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgcaaa 28751077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 19806170 - 19806117
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| || ||||| |||| || ||||||||||||||||||||    
T  19806170 gtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaatcgtgtcacg 19806117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 39468936 - 39468989
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| || ||||| || |||| ||||||||||||||||||||    
T  39468936 gtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtcacg 39468989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 3075976 - 3076032
Alignment:
Q  56 aaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgaccaaccttat 112  Q
    ||||||| ||| ||||| ||||||||||||||  ||| |||||||||||||||||||    
T  3075976 aaatcgtgtcacgatttgccaaatcgtgacacagttgatgcgtacgaccaaccttat 3076032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 9352995 - 9352903
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||| |||   ||||||||||||||| |||  || ||||||| ||| ||| |||||||||||||    
T  9352995 gtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaa 9352903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 11181450 - 11181412
Alignment:
Q  158 aaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  11181450 aaaatcgtgtcacgattggacaccctgcaaaacatgctc 11181412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 30182352 - 30182302
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgt 146  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||    
T  30182352 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgt 30182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 15464935 - 15464984
Alignment:
Q  74 ccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaactt 123  Q
    |||||||||| |||| ||| | ||||||||||||||||| ||||||||||    
T  15464935 ccaaatcgtgtcacgattgatacgtacgaccaaccttatcctgaaaactt 15464984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 32636627 - 32636598
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgta 99  Q
    ||||||||||||||||||||||||||||||    
T  32636627 tttcccaaatcgtgacacgtttggtgcgta 32636598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 24136336 - 24136388
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| |||| |||||||||| ||| | |||||||||||    
T  24136336 gaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 24136388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 39284688 - 39284554
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||    
T  39284688 tttcccaaatcgtgacacatttggtgcgtacgaccaaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtca 39284589  T
Q  170 caattggacaccctgc-aaatcatgctcactgcct 203  Q
    | || ||||||||||| ||| ||||||||||||||    
T  39284588 cgataggacaccctgcgaaaccatgctcactgcct 39284554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 32719360 - 32719449
Alignment:
Q  277 tagaacttgatgcatctgtcatatagtgaaacttgcaacagatttaaaacccttga-ttaataactcaaacaaatcaagtgttagtcatc 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32719360 tagaacttgatgcatctgtcatatagtgaaacttgcaacagatttaaaacccttgatttaataactcaaacaaatcaagtgttagtcatc 32719449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 184
Target Start/End: Complemental strand, 29867671 - 29867556
Alignment:
Q  70 tttcccaaatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtc 168  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  29867671 tttcccaaatcgtgacacgtttggtgcgtacaaccaaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtc 29867572  T
Q  169 acaattggacaccctg 184  Q
    || |||||||||||||    
T  29867571 acgattggacaccctg 29867556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 277 - 363
Target Start/End: Original strand, 32728309 - 32728396
Alignment:
Q  277 tagaacttgatgcatctgtcatatagtgaaacttgcaacagatttaaaacccttga-ttaataactcaaacaaatcaagtgttagtca 363  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32728309 tagaacttgatgcatctgtcatatggtgaaacttgcaacagatttaaaacccttgatttaataactcaaacaaatcaagtgttagtca 32728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 2837248 - 2837339
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| |||||||||| ||||| |||  ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  2837248 gtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 2837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 36318413 - 36318513
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttcc-aaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||||||||||||| |||||||| || |||| |||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||| ||||||    
T  36318413 gtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaatcgtgtcacgtttccccaaaaatcgtgtcacgattggacaccctgcaaaacatgct 36318512  T
Q  196 c 196  Q
    |    
T  36318513 c 36318513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 220
Target Start/End: Original strand, 35447436 - 35447627
Alignment:
Q  39 gtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc------------aaccttattctgaaaacttgcc 126  Q
    ||||||| | |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||            ||||||||  ||||||||||||    
T  35447436 gtgttcagatccggacaaaatcgtgtcacgatttcccaa-tcgtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcc 35447534  T
Q  127 cagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgccttcaaaaatcatgacacg 220  Q
    |   || |||| ||||||||||| |||| |||||||||||| ||||||| |||||||| |||  |||||||||||| |  ||||||||||||||    
T  35447535 cgacaaaccgataatcgtgtcacattttcccaaaatcgtgttacaattgaacaccctgaaaacaatgctcactgcc-tagaaaatcatgacacg 35447627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 36988479 - 36988567
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  36988479 gtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcatgtcacgattggacaccctg 36988567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 6595378 - 6595486
Alignment:
Q  77 aatcgtgacacgtttggtgcgtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    ||||||| || | ||| |||||||||| |||||||| ||||||| || |||||| ||||| |||||||||||||||||| ||||||| ||||||| ||||    
T  6595378 aatcgtgtcaagattgatgcgtacgactaaccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacgattg 6595477  T
Q  176 gacaccctg 184  Q
    |||||||||    
T  6595478 gacaccctg 6595486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 209
Target Start/End: Complemental strand, 17863955 - 17863844
Alignment:
Q  99 acgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctca 197  Q
    |||||||||||||| || |||| ||||||||| |||   |||||||||||||||||| |||||||  |||||| ||||||||||||| ||| ||||||||    
T  17863955 acgaccaaccttatcctcaaaaacttgcccagcaagtaaaaaatcgtgtcacgttttcccaaaattatgtcacgattggacaccctgaaaaccatgctca 17863856  T
Q  198 ctgccttcaaaa 209  Q
    ||||||| ||||    
T  17863855 ctgccttgaaaa 17863844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 33528284 - 33528177
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgct 195  Q
    |||||| |||||||||||||||||| | ||||| |||   ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| ||||||    
T  33528284 gtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgct 33528185  T
Q  196 cactgcct 203  Q
    ||||||||    
T  33528184 cactgcct 33528177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 45726530 - 45726464
Alignment:
Q  137 aaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45726530 aaaatcgtgtcacatttgcccaaaatcgtgtcacaattggacaccctgaaaatcatgctcactgcct 45726464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 34389287 - 34389375
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| |||||||| | ||||| |||   ||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  34389287 gtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg 34389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 45099519 - 45099432
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct 183  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||  ||| ||||||| ||||||| ||||||||||||    
T  45099519 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacaatttcccaaaattgtgtcacgattggacaccct 45099432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 20522659 - 20522746
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| |||||||| ||||||| |||  |||||||||||||||||||  |||||||||| ||| ||||  |||||||    
T  20522659 gtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccctg 20522746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 14698669 - 14698563
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    |||||||||||||||| |||||||  ||||||  |||  ||||||||||||||||||| |||||||||||  || | || ||| || | |||||||||||    
T  14698669 gtacgaccaaccttatcctgaaaatgtgcccaacaagttgaaaatcgtgtcacgttttcccaaaatcgtgatacgaatgaacatccagaaaatcatgctc 14698570  T
Q  197 actgcct 203  Q
    |||||||    
T  14698569 actgcct 14698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 23078131 - 23078025
Alignment:
Q  98 tacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||||||||||| |||||||| | ||||  |||   ||||||||||||||||||| ||||||||||| ||||||||  |||||| |||  |||||||    
T  23078131 tacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacaattgagcaccctacaatccatgctc 23078032  T
Q  197 actgcct 203  Q
    |||||||    
T  23078031 actgcct 23078025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 13569807 - 13569874
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    |||||||||||||||||||||||||||  || ||| ||||  ||||||||||| ||||||||||||||    
T  13569807 gaaaatcgtgtcacgtttttccaaaattatgacacgattgagcaccctgcaaaccatgctcactgcct 13569874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 21630382 - 21630489
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct-gcaaatcatgct 195  Q
    |||||||||||||||| |||||||| ||||||| |||  ||||||||||||| ||||| ||||||| ||| ||| ||||  ||||||   ||| ||||||    
T  21630382 gtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcatgttttcccaaaattgtgacacgattgagcaccctaaaaaaccatgct 21630481  T
Q  196 cactgcct 203  Q
    ||||||||    
T  21630482 cactgcct 21630489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 8389768 - 8389703
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||||||||| ||||||||||| ||| |  | |||||||||||||||| ||||||||||    
T  8389768 gaaaatcgtgtcacgttttcccaaaatcgtgacacga--gaacaccctgcaaatcatactcactgcct 8389703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 2334821 - 2334875
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  2334821 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 2334875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 4503536 - 4503590
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  4503536 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 4503590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 10706873 - 10706825
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    ||||||||||||||||||| ||||||||||| ||||||||  |||||||    
T  10706873 gaaaatcgtgtcacgttttcccaaaatcgtgacacaattgagcaccctg 10706825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 28258838 - 28258746
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||| |||   ||||||||||||||| |||  |||||| ||| ||| ||| |||||||||||||    
T  28258838 gtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaa 28258746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 39483313 - 39483401
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| |||||||| | ||||  |||   ||||||||||||||||||| ||||||||||| ||| ||||  |||||||    
T  39483313 gtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctg 39483401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 5723658 - 5723712
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| |||| |||| ||||| ||||||||||||||    
T  5723658 gtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaatcgtgtcacg 5723712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 17865614 - 17865684
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtg 166  Q
    |||||||||||||||| |||||||| | ||||| |||   |||||||||||||| |||| |||||||||||    
T  17865614 gtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtg 17865684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 33118517 - 33118567
Alignment:
Q  54 caaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcgtacgacc 104  Q
    ||||||||| ||||| ||  ||||||||||||||| |||||||||||||||    
T  33118517 caaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgacc 33118567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 36206069 - 36206123
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||| ||||| ||||| ||||||||||||||    
T  36206069 gtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacg 36206123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 2334767 - 2334804
Alignment:
Q  138 aaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  2334767 aaatcgtgtcacgtttttcccaaatcgtgtcacgattg 2334804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 25410118 - 25410170
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| |||| |||||||||| ||| | |||||||||||    
T  25410118 gaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 25410170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 30833069 - 30833017
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| |||| |||||||||| ||| | |||||||||||    
T  30833069 gaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 30833017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 20819 - 20920
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||    
T  20819 gtacgaccaaccttattctaaaaactttcccaacaagccgaaaatcgtgtcacgttttcccaaaatcgtgtcatgattggacaccctgcaaaacatgctc 20918  T
Q  197 ac 198  Q
    ||    
T  20919 ac 20920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 7e-31; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 3809238 - 3809414
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgc------------gtacgac 103  Q
    |||||||||||||||| |||| |||||||| | |||||||||||||||||| ||||||||||||| |||||| |||||| |            |||||||    
T  3809238 atgggtcaaagaatgcttataatgtgttcagatccggacaaaatcgtatcacgatttcccaaatcatgacacatttggtacgtacgacccaaggtacgac 3809337  T
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct 183  Q
    ||||||||| |||||||||| |||   |||||||||||||||||||||||  ||||||||||||||| ||||| ||||||    
T  3809338 caaccttatcctgaaaactttccc---aagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcaccct 3809414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 21593282 - 21593110
Alignment:
Q  39 gtgttcatacccggacaaaatcgtatcatgatttcccaaatcgtgacacgtttggtgcg------------tacgaccaaccttattctgaaaacttgcc 126  Q
    ||||||||| |||||||||||||| |||   ||||||||||||||||||| ||||| ||            ||||||||||||||| || ||||| ||||    
T  21593282 gtgttcatatccggacaaaatcgtgtcacattttcccaaatcgtgacacggttggtacgaacgacccaaggtacgaccaaccttatcctaaaaacatgcc 21593183  T
Q  127 cagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcact 199  Q
    ||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| ||| ||||||||||    
T  21593182 cagcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacaccctgaaaaccatgctcact 21593110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 9183414 - 9183500
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct 183  Q
    |||||||||||||||| |||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  9183414 gtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccct 9183500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 22964135 - 22964226
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||| |||||||||| |||| |||| ||||||||||||    
T  22964135 gtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccctgcaaa 22964226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 23824258 - 23824167
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||| |||||||||| |||| |||| ||||||||||||    
T  23824258 gtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtatcacgattgaacaccctgcaaa 23824167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 603642 - 603719
Alignment:
Q  98 tacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| ||||    
T  603642 tacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgtcacgattg 603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 31979954 - 31980061
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg-caaatcatgct 195  Q
    |||||||||||||||| |||||||| ||||||| |||  |||||| |||||||||||||||||||||||| ||| ||||  |||||||  ||| ||||||    
T  31979954 gtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaattgtgtcacgtttttccaaaatcgtgacacgattgatcaccctgaaaaaccatgct 31980053  T
Q  196 cactgcct 203  Q
    ||||||||    
T  31980054 cactgcct 31980061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 31086092 - 31086025
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||||||||||||||||||||| ||| ||||  ||||||||||| ||||||||||||||    
T  31086092 gaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgcct 31086025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 5407312 - 5407396
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    ||||||||||||||||  |||||| ||||||||| ||||| ||||  |||||||| ||||||||||||||||||| |||||||||    
T  5407312 gtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacgattggacac 5407396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 5411637 - 5411721
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacac 180  Q
    ||||||||||||||||  |||||| ||||||||| ||||| ||||  |||||||| ||||||||||||||||||| |||||||||    
T  5411637 gtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacgattggacac 5411721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 17759494 - 17759415
Alignment:
Q  104 caaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccct 183  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||||||||||  |||||||||||||||  |||| ||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacggttgggcaccct 17759415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 5017156 - 5017050
Alignment:
Q  97 gtacgaccaaccttattctgaaaact-tgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgc 194  Q
    |||||||||||||||| ||||||| | | |||||||||   |||||||||||||||||||  |||||||||| ||| ||||  ||||||||||| |||||    
T  5017156 gtacgaccaaccttatcctgaaaaatgtacccagtaagtttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccctgcaaaccatgc 5017057  T
Q  195 tcactgc 201  Q
    |||||||    
T  5017056 tcactgc 5017050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 24714809 - 24714872
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaa 160  Q
    |||||||||| ||||| |||||||| ||||||| |||  |||||||||||||||||||||||||    
T  24714809 gtacgaccaatcttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgtttttccaaa 24714872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 26661495 - 26661422
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcac 170  Q
    |||||||||||||||| ||||||||  | |||| ||| |||||||| |||||| |||| |||||||||||||||    
T  26661495 gtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26661422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 26767466 - 26767393
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcac 170  Q
    |||||||||||||||| ||||||||  | |||| ||| |||||||| |||||| |||| |||||||||||||||    
T  26767466 gtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcac 26767393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 5413852 - 5413906
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  5413852 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 5413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 5571924 - 5571846
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||  || ||||| ||||||| |||  |||||||||||||||||||  |||||||||| ||| ||||    
T  5571924 gtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattg 5571846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 24435632 - 24435566
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatc 163  Q
    |||||||||||||||| |||||||| |||| |  |||  ||||||||||||||||||| ||||||||    
T  24435632 gtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaatcgtgtcacgttttcccaaaatc 24435566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 30834941 - 30834995
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  30834941 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 30834995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 33160758 - 33160812
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  33160758 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg 33160812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 5757139 - 5757047
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||| |||   ||||||||||||||| |||  |||||||||  ||| ||| |||||||||||||    
T  5757139 gtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaa 5757047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 21272645 - 21272558
Alignment:
Q  101 gaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||| |||||||| |||| |  | | | ||||||||| |||| ||  ||||||||||||||| |||||||||||| ||||    
T  21272645 gaccaaccttatcctgaaaacgtgccaaacatgtcaaaaatcgtgacacgattacccaaaatcgtgtcacgattggacacccttcaaa 21272558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 603568 - 603610
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaa 58  Q
    |||||||||||||||| ||||||||||||| | ||||||||||    
T  603568 atgggtcaaagaatgcttatattgtgttcagatccggacaaaa 603610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 5406602 - 5406656
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| || |||| ||||||||| ||||| ||||||||||||||    
T  5406602 gtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 5406656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 5410927 - 5410981
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| || |||| ||||||||| ||||| ||||||||||||||    
T  5410927 gtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacg 5410981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 16452844 - 16452898
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaatcgtgtcacg 150  Q
    |||||||||||||||| ||||||| ||| ||||| ||||| ||||||||||||||    
T  16452844 gtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacg 16452898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 18234520 - 18234608
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaag-ccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||||||||||||||| |||||||| | ||||| |||   ||||||||| ||||||||| |||||||| || ||| ||||  |||||||    
T  18234520 gtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtatcacgttttcccaaaatcctgacacgattgagcaccctg 18234608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 22709497 - 22709549
Alignment:
Q  136 gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    ||||||||||||||| ||| |||| |||||||||| ||| | |||||||||||    
T  22709497 gaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 22709549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Original strand, 23896769 - 23896861
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaag-ccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||| |||    |||||||||||||| |||  |||||||||  ||| ||| |||||||||||||    
T  23896769 gtacgaccaaccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaa 23896861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 17668 - 17767
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctc 196  Q
    ||||||||||||||||  ||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||| |||||||    
T  17668 gtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacggttggacaccctgcaaaacatgctc 17767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 6967 - 6878
Alignment:
Q  16 atgggtcaaagaatgcatatattgtgttcatacccggacaaaatcgtatcatgatttcc-caaatcgtgacacgtttggtgcgtacgacc 104  Q
    |||||||||||||||||||||  ||||||||| |||  ||||||||||||| | ||||| |||||||||||| | |||||||||||||||    
T  6967 atgggtcaaagaatgcatataaagtgttcatatccgagcaaaatcgtatcacgttttccacaaatcgtgacatggttggtgcgtacgacc 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 6833 - 6788
Alignment:
Q  158 aaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  6833 aaaatcgtgtcacgattggacaccctgcaaaccatgctcactgcct 6788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 434297 - 434217
Alignment:
Q  97 gtacgaccaaccttattctgaaaa-cttgcccagtaagccgaaaa-tcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||| |||||||||| ||| ||||||||||||||| ||||    
T  434297 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattg 434217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 36493 - 36401
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| |||||||| | ||||| |||   |||||| ||||||||||||  |||||||||| ||| ||| |||||||||||||    
T  36493 gtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaattgtgtcacgttttcacaaaatcgtgccacgatttgacaccctgcaaa 36401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 114350 - 114263
Alignment:
Q  97 gtacgaccaaccttattctgaaaactt-gcccagtaagccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctg 184  Q
    |||| ||||||||||| ||||||| || |||||| ||||| |||||||||||||||||| |||| |||||||||  ||||||| |||||    
T  114350 gtaccaccaaccttatcctgaaaattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtcatgattggacgccctg 114263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 45635 - 45730
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatca 191  Q
    |||||||||||||||| ||||||||||  |||| |||   ||||||||||||||| |||  || ||||||| ||| ||| ||||||||||||||||    
T  45635 gtacgaccaaccttatcctgaaaacttagccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaatca 45730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 2930 - 3009
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaagcc-gaaaatcgtgtcacgtttttccaaaatcgtgtcacaattg 175  Q
    |||||||||||||||| |||||||| | ||||| |||   |||||||| |||||||||| ||||||||||| ||| ||||    
T  2930 gtacgaccaaccttatcctgaaaacatacccagcaagtttgaaaatcgggtcacgttttcccaaaatcgtgacacgattg 3009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 132940 - 132848
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaag-ccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||| |||   ||||||| ||||||| ||   |||||||||||||| ||| ||||| |||||||    
T  132940 gtacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaa 132848  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 86066 - 86131
Alignment:
Q  137 aaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaatcatgctcactgcct 203  Q
    |||||||||||||||||| ||||||||||| ||  ||||  ||||||||||| ||||||| ||||||    
T  86066 aaaatcgtgtcacgttttcccaaaatcgtg-catgattgagcaccctgcaaaccatgctccctgcct 86131  T

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Target: scaffold0510 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 1271 - 1179
Alignment:
Q  97 gtacgaccaaccttattctgaaaacttgcccagtaag-ccgaaaatcgtgtcacgtttttccaaaatcgtgtcacaattggacaccctgcaaa 188  Q
    |||||||||||||||| ||||||||||  |||| |||    |||||||||||||| |||  |||||||||  ||| ||| |||||||||||||    
T  1271 gtacgaccaaccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaa 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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