View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20020_high_18 (Length: 273)
Name: NF20020_high_18
Description: NF20020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20020_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 8896388 - 8896153
Alignment:
| Q |
1 |
tcttttcatattccaatattcttgaacagtttttatttttagtaatgtatattctcttttgcattgtaagggtctagttctaaatgtaagtgtgacactt |
100 |
Q |
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| T |
8896388 |
tcttttcattttccaatattcttgaacagtttttatttttagtaatgtatattctctttttcattgtaaggctctagttctaaatgtaagtg--acactt |
8896291 |
T |
|
| Q |
101 |
gaaaccaagttataaccctaaactcactggaacttccattttgactattaaaaaagtttacatagaggaacaaataacaaatcacattctctgcattcaa |
200 |
Q |
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|||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8896290 |
gaaaccaagttataaccctaaactcatgggaacttgcattttgactattaaaaaggtttacatagaggaacaaataacaaatcacattctctgcattcaa |
8896191 |
T |
|
| Q |
201 |
tattttcatgcaatcgatcgtcgatcgccaatcaagat |
238 |
Q |
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||||||||||||||||||||||||||||||||| |||| |
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| T |
8896190 |
tattttcatgcaatcgatcgtcgatcgccaatcgagat |
8896153 |
T |
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