View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20020_low_22 (Length: 271)
Name: NF20020_low_22
Description: NF20020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20020_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 783524 - 783277
Alignment:
| Q |
6 |
agcagcacagaaaagtaaatgaaaatggcgagaaaatatcgaatatatattctatcatgtttattggttgacgtgaaaattaaaagaagaaatatggata |
105 |
Q |
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| T |
783524 |
agcaccacaaaaaagtaaatgaaaatggcgagaaaatatcgaatatatattctatcatgtttattggttgacgtgaaaattaaaagaagaaatatggata |
783425 |
T |
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| Q |
106 |
gtaaatggtcccataagttgtagcaatttttgtgacttcgaagacaccaaaaatttgcaagtacttgaaaatatgtggaccattagagagacttaccaag |
205 |
Q |
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| T |
783424 |
gtaaatggtcccataagttgtagcaatttttgtgacttcgaagacaccaaaaatttgcaagtacttgaaaatatgtggaccattagagagacttaccaag |
783325 |
T |
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| Q |
206 |
ggcattgataggtgagacaggagtttggaagaagataacagaagagac |
253 |
Q |
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| T |
783324 |
ggcattgataggtgagacaggagtttggaagaagataacagaagagac |
783277 |
T |
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