View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20021_high_16 (Length: 290)
Name: NF20021_high_16
Description: NF20021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20021_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 10 - 277
Target Start/End: Original strand, 31864146 - 31864413
Alignment:
| Q |
10 |
tgagtcctactcaacactaatccttcaataaccgtggctcttttcaagtattaataaatatgaatgaacatctctaaacacataaaccatattgtaagtt |
109 |
Q |
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| T |
31864146 |
tgagtcatactcaacactaatccttcaataaccgtggctgttttcaagtattaataaatatgaatgaacatctctaaacacataaaacatattgtaagtt |
31864245 |
T |
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| Q |
110 |
ttaactgcagctaacactaataaaattcaaaattttaatcatcatagaaggaaaaaattaactgaccatgattgctaggcgaacgacaaagacactgtaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
31864246 |
ttaactgcagctaacactaataaaattcaaaattttaatcatcatagaaggaaaaaattaactgaccatgattgctaggcgaacaacaaagacactgtaa |
31864345 |
T |
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| Q |
210 |
taggatgagagacattgagtagttgaatactggaaatcttctttttccacatccttgtggaattttct |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31864346 |
taggatgagagacattgagtagttgaatactggaaatcttctttttccacatccttgtggaattttct |
31864413 |
T |
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