View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20021_high_9 (Length: 402)

Name: NF20021_high_9
Description: NF20021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20021_high_9
NF20021_high_9
[»] chr3 (68 HSPs)
chr3 (12-384)||(22762064-22762438)
chr3 (13-293)||(32754172-32754452)
chr3 (86-293)||(52464809-52465015)
chr3 (12-293)||(8238922-8239203)
chr3 (12-293)||(54795806-54796087)
chr3 (86-293)||(44075231-44075435)
chr3 (12-293)||(28169944-28170225)
chr3 (178-293)||(46850646-46850761)
chr3 (88-228)||(42617595-42617733)
chr3 (86-151)||(916360-916425)
chr3 (172-291)||(41990692-41990812)
chr3 (206-293)||(54835751-54835839)
chr3 (169-293)||(10617645-10617771)
chr3 (322-384)||(916189-916251)
chr3 (172-293)||(36987666-36987788)
chr3 (172-293)||(37013105-37013227)
chr3 (172-293)||(42187677-42187799)
chr3 (23-71)||(916550-916598)
chr3 (23-71)||(44075065-44075113)
chr3 (237-293)||(46090112-46090168)
chr3 (172-293)||(26881646-26881768)
chr3 (322-384)||(44075483-44075545)
chr3 (322-384)||(54796135-54796197)
chr3 (12-61)||(52464735-52464784)
chr3 (171-293)||(20849328-20849454)
chr3 (328-372)||(36918891-36918935)
chr3 (172-293)||(37413594-37413717)
chr3 (237-293)||(39721284-39721340)
chr3 (172-293)||(46088647-46088770)
chr3 (238-293)||(43316511-43316566)
chr3 (178-289)||(44541149-44541259)
chr3 (322-384)||(28170270-28170332)
chr3 (334-384)||(36170115-36170165)
chr3 (322-384)||(52467965-52468027)
chr3 (171-287)||(33899858-33899975)
chr3 (173-226)||(54835867-54835920)
chr3 (172-293)||(7040906-7041029)
chr3 (237-293)||(12101458-12101514)
chr3 (237-293)||(14587381-14587437)
chr3 (237-293)||(38361775-38361831)
chr3 (328-384)||(42617847-42617903)
chr3 (237-293)||(44762717-44762773)
chr3 (237-293)||(54113437-54113493)
chr3 (237-293)||(54203740-54203796)
chr3 (171-259)||(5239914-5240004)
chr3 (172-274)||(35529785-35529887)
chr3 (328-375)||(48263984-48264031)
chr3 (211-293)||(12996777-12996862)
chr3 (172-293)||(29500357-29500481)
chr3 (172-293)||(30269010-30269134)
chr3 (239-293)||(35690208-35690262)
chr3 (172-293)||(50739179-50739301)
chr3 (172-293)||(50773554-50773676)
chr3 (340-377)||(1757700-1757737)
chr3 (237-293)||(4018941-4018997)
chr3 (335-379)||(7738660-7738704)
chr3 (312-384)||(8238817-8238889)
chr3 (312-384)||(10617539-10617611)
chr3 (237-293)||(13337124-13337179)
chr3 (237-293)||(15496464-15496520)
chr3 (237-293)||(20996328-20996384)
chr3 (312-384)||(32754064-32754136)
chr3 (237-293)||(45599261-45599317)
chr3 (237-293)||(47719509-47719565)
chr3 (237-293)||(52461052-52461108)
chr3 (237-293)||(54510381-54510437)
chr3 (237-293)||(54741828-54741884)
chr3 (340-384)||(54835637-54835681)
[»] chr1 (69 HSPs)
chr1 (12-293)||(28568523-28568804)
chr1 (12-293)||(49223174-49223455)
chr1 (187-301)||(23910857-23910972)
chr1 (12-293)||(16032860-16033141)
chr1 (12-288)||(5542032-5542313)
chr1 (171-293)||(17670010-17670132)
chr1 (15-293)||(36679952-36680230)
chr1 (175-293)||(18091298-18091422)
chr1 (171-286)||(12247693-12247808)
chr1 (211-293)||(24473519-24473601)
chr1 (322-384)||(28568848-28568910)
chr1 (13-61)||(12246579-12246627)
chr1 (167-293)||(15845779-15845905)
chr1 (312-384)||(18091189-18091261)
chr1 (312-384)||(23911002-23911069)
chr1 (172-293)||(36952640-36952763)
chr1 (237-293)||(46040480-46040536)
chr1 (173-293)||(44065371-44065492)
chr1 (236-293)||(11606460-11606517)
chr1 (171-273)||(41916409-41916513)
chr1 (86-138)||(12247614-12247666)
chr1 (237-293)||(43119108-43119164)
chr1 (333-384)||(21965916-21965967)
chr1 (172-293)||(43123063-43123186)
chr1 (340-378)||(4770659-4770697)
chr1 (21-71)||(17670232-17670282)
chr1 (179-293)||(23730228-23730345)
chr1 (172-293)||(25659736-25659860)
chr1 (335-376)||(23524818-23524859)
chr1 (172-286)||(33932947-33933063)
chr1 (179-293)||(45104205-45104321)
chr1 (237-293)||(7308325-7308381)
chr1 (312-384)||(16033180-16033252)
chr1 (172-293)||(17249060-17249183)
chr1 (312-380)||(17669907-17669975)
chr1 (172-293)||(33373747-33373870)
chr1 (172-293)||(33642635-33642758)
chr1 (322-381)||(5541937-5541996)
chr1 (12-71)||(18091524-18091583)
chr1 (171-293)||(39879067-39879190)
chr1 (335-378)||(41032923-41032966)
chr1 (12-67)||(41916249-41916303)
chr1 (342-376)||(12213987-12214021)
chr1 (172-293)||(17366281-17366403)
chr1 (172-293)||(39326971-39327093)
chr1 (172-293)||(39729132-39729254)
chr1 (15-53)||(45003683-45003721)
chr1 (342-375)||(32209871-32209904)
chr1 (340-377)||(49222809-49222846)
chr1 (237-293)||(1322519-1322575)
chr1 (341-377)||(5553033-5553069)
chr1 (340-380)||(6423793-6423833)
chr1 (172-293)||(9574886-9575009)
chr1 (237-293)||(11583181-11583237)
chr1 (341-373)||(15382851-15382883)
chr1 (237-293)||(16097367-16097423)
chr1 (237-293)||(17585540-17585596)
chr1 (341-377)||(17669638-17669674)
chr1 (340-380)||(26329153-26329193)
chr1 (340-376)||(33153911-33153947)
chr1 (237-293)||(33831919-33831975)
chr1 (237-293)||(33894081-33894137)
chr1 (237-293)||(33895211-33895267)
chr1 (237-293)||(34078307-34078363)
chr1 (237-293)||(34652299-34652355)
chr1 (312-384)||(36679848-36679919)
chr1 (237-293)||(41901694-41901750)
chr1 (237-293)||(47037125-47037181)
chr1 (312-380)||(49223075-49223143)
[»] chr7 (65 HSPs)
chr7 (12-293)||(4490804-4491084)
chr7 (20-293)||(42915379-42915652)
chr7 (91-293)||(47171663-47171864)
chr7 (86-293)||(42828726-42828931)
chr7 (86-293)||(33232472-33232676)
chr7 (86-293)||(34284614-34284818)
chr7 (86-293)||(20762936-20763140)
chr7 (86-293)||(29488502-29488706)
chr7 (86-293)||(19036177-19036381)
chr7 (86-293)||(20718255-20718459)
chr7 (172-293)||(3840040-3840162)
chr7 (175-293)||(38435779-38435897)
chr7 (12-293)||(42995366-42995647)
chr7 (171-293)||(19050266-19050390)
chr7 (172-293)||(4399993-4400115)
chr7 (171-293)||(17816611-17816735)
chr7 (12-71)||(38435616-38435675)
chr7 (322-384)||(19036429-19036491)
chr7 (322-384)||(20718145-20718207)
chr7 (172-290)||(4407968-4408083)
chr7 (312-384)||(4491119-4491191)
chr7 (322-384)||(20762826-20762888)
chr7 (322-384)||(29488392-29488454)
chr7 (322-384)||(33232724-33232786)
chr7 (322-384)||(34284866-34284928)
chr7 (178-292)||(38049170-38049286)
chr7 (23-71)||(19036006-19036054)
chr7 (23-71)||(20718582-20718630)
chr7 (23-71)||(20763257-20763305)
chr7 (23-71)||(29488831-29488879)
chr7 (23-71)||(33232306-33232354)
chr7 (340-384)||(38435957-38436001)
chr7 (172-293)||(41343247-41343370)
chr7 (340-384)||(42995262-42995306)
chr7 (312-384)||(47171554-47171626)
chr7 (23-70)||(34284446-34284493)
chr7 (12-71)||(42828648-42828707)
chr7 (172-293)||(23154658-23154779)
chr7 (237-293)||(21134350-21134406)
chr7 (312-384)||(42828965-42829037)
chr7 (340-378)||(43539135-43539173)
chr7 (172-293)||(47840753-47840875)
chr7 (172-293)||(40035956-40036077)
chr7 (21-66)||(47171890-47171935)
chr7 (237-293)||(1448123-1448179)
chr7 (237-293)||(20482302-20482358)
chr7 (172-293)||(41426986-41427108)
chr7 (172-293)||(43156214-43156337)
chr7 (173-293)||(40789202-40789324)
chr7 (172-293)||(4406553-4406677)
chr7 (172-293)||(4492363-4492484)
chr7 (172-293)||(29448643-29448767)
chr7 (314-383)||(27993035-27993103)
chr7 (253-293)||(4615415-4615455)
chr7 (237-293)||(5483428-5483484)
chr7 (237-293)||(10999135-10999191)
chr7 (237-293)||(12907934-12907990)
chr7 (237-293)||(17278177-17278233)
chr7 (340-368)||(21327573-21327601)
chr7 (172-293)||(23639342-23639465)
chr7 (237-293)||(27031223-27031279)
chr7 (237-293)||(32960790-32960846)
chr7 (237-293)||(38045680-38045736)
chr7 (237-293)||(44651876-44651932)
chr7 (237-293)||(45620672-45620728)
[»] scaffold0010 (4 HSPs)
scaffold0010 (12-293)||(50269-50550)
scaffold0010 (12-293)||(57802-58083)
scaffold0010 (312-384)||(50163-50235)
scaffold0010 (312-384)||(57696-57768)
[»] chr8 (63 HSPs)
chr8 (86-293)||(45296629-45296835)
chr8 (171-293)||(39201543-39201665)
chr8 (86-293)||(20665438-20665642)
chr8 (12-293)||(41904779-41905050)
chr8 (86-293)||(30550801-30551005)
chr8 (86-293)||(44215550-44215754)
chr8 (20-293)||(19245452-19245734)
chr8 (20-293)||(19318636-19318918)
chr8 (175-293)||(12251410-12251528)
chr8 (12-293)||(39443680-39443961)
chr8 (171-293)||(22947652-22947774)
chr8 (12-71)||(12251247-12251306)
chr8 (172-293)||(36059204-36059326)
chr8 (322-384)||(44215802-44215864)
chr8 (12-71)||(29431486-29431545)
chr8 (322-384)||(20665690-20665752)
chr8 (180-293)||(27877990-27878104)
chr8 (180-293)||(27914934-27915048)
chr8 (180-293)||(27961353-27961467)
chr8 (180-293)||(28018171-28018285)
chr8 (172-293)||(45138978-45139100)
chr8 (340-384)||(12251588-12251632)
chr8 (23-71)||(20665272-20665320)
chr8 (23-71)||(30550635-30550683)
chr8 (340-384)||(39443576-39443620)
chr8 (23-71)||(44215385-44215433)
chr8 (171-293)||(39140725-39140848)
chr8 (172-293)||(11579216-11579338)
chr8 (178-287)||(27748864-27748976)
chr8 (322-384)||(30551053-30551115)
chr8 (172-293)||(34997554-34997676)
chr8 (172-293)||(38139335-38139459)
chr8 (172-289)||(39525480-39525598)
chr8 (172-293)||(41526333-41526455)
chr8 (237-293)||(2184404-2184460)
chr8 (172-293)||(7219402-7219525)
chr8 (86-138)||(22947573-22947625)
chr8 (172-293)||(36216504-36216626)
chr8 (239-293)||(37034848-37034902)
chr8 (21-71)||(39201769-39201819)
chr8 (178-290)||(41903062-41903175)
chr8 (215-293)||(42844302-42844382)
chr8 (172-293)||(11924791-11924914)
chr8 (172-293)||(27467735-27467860)
chr8 (237-293)||(39486022-39486078)
chr8 (237-293)||(42984014-42984070)
chr8 (172-293)||(169632-169755)
chr8 (172-293)||(12261397-12261520)
chr8 (86-129)||(29431426-29431469)
chr8 (20-59)||(45296562-45296601)
chr8 (172-293)||(1877507-1877628)
chr8 (178-293)||(44602872-44602988)
chr8 (12-49)||(23620645-23620682)
chr8 (237-293)||(2190641-2190697)
chr8 (237-293)||(6816055-6816111)
chr8 (237-293)||(14718890-14718946)
chr8 (328-384)||(15310308-15310364)
chr8 (328-384)||(15490677-15490733)
chr8 (237-293)||(17046004-17046060)
chr8 (237-293)||(17313535-17313591)
chr8 (328-384)||(34997444-34997500)
chr8 (237-293)||(38909310-38909366)
chr8 (237-293)||(39685446-39685502)
[»] chr6 (43 HSPs)
chr6 (86-293)||(33976025-33976230)
chr6 (86-293)||(12582304-12582508)
chr6 (86-293)||(247441-247645)
chr6 (322-384)||(18313919-18313981)
chr6 (218-293)||(18314029-18314104)
chr6 (12-151)||(3053720-3053862)
chr6 (239-293)||(3053911-3053965)
chr6 (171-289)||(28231012-28231121)
chr6 (172-293)||(28472245-28472369)
chr6 (312-384)||(3054003-3054075)
chr6 (172-290)||(8866990-8867111)
chr6 (12-71)||(28229693-28229752)
chr6 (12-71)||(33976348-33976407)
chr6 (322-384)||(247331-247393)
chr6 (23-71)||(247763-247811)
chr6 (23-71)||(12582140-12582188)
chr6 (216-292)||(29043232-29043308)
chr6 (89-148)||(3090713-3090772)
chr6 (172-293)||(19988914-19989036)
chr6 (171-293)||(559751-559875)
chr6 (12-61)||(3090635-3090684)
chr6 (171-293)||(6018500-6018624)
chr6 (237-293)||(5414556-5414612)
chr6 (23-71)||(18314148-18314196)
chr6 (312-384)||(33975915-33975987)
chr6 (172-293)||(7541129-7541251)
chr6 (237-287)||(8872681-8872731)
chr6 (322-384)||(12582556-12582618)
chr6 (172-293)||(34247683-34247805)
chr6 (172-293)||(24046490-24046610)
chr6 (237-293)||(34206997-34207053)
chr6 (237-293)||(34319168-34319223)
chr6 (351-380)||(1225191-1225220)
chr6 (211-293)||(6833575-6833659)
chr6 (336-369)||(21941486-21941519)
chr6 (237-293)||(3850249-3850305)
chr6 (340-376)||(13496110-13496146)
chr6 (237-293)||(18593604-18593660)
chr6 (340-376)||(19277568-19277604)
chr6 (340-376)||(20480662-20480698)
chr6 (237-293)||(20791570-20791626)
chr6 (237-293)||(24162816-24162872)
chr6 (237-293)||(32244401-32244457)
[»] chr5 (53 HSPs)
chr5 (12-293)||(3212999-3213281)
chr5 (12-293)||(18040955-18041235)
chr5 (86-293)||(37461893-37462097)
chr5 (187-298)||(38042067-38042178)
chr5 (175-293)||(9700019-9700137)
chr5 (178-293)||(36514993-36515108)
chr5 (12-293)||(43354534-43354819)
chr5 (13-293)||(33929005-33929281)
chr5 (12-71)||(9700241-9700300)
chr5 (178-293)||(19270927-19271042)
chr5 (321-384)||(18041283-18041346)
chr5 (178-293)||(2001511-2001627)
chr5 (172-293)||(14205435-14205558)
chr5 (172-293)||(15875676-15875801)
chr5 (23-71)||(37462215-37462263)
chr5 (340-383)||(9699915-9699958)
chr5 (173-293)||(20259073-20259194)
chr5 (172-293)||(2530107-2530231)
chr5 (322-384)||(37461783-37461845)
chr5 (215-293)||(39803826-39803903)
chr5 (237-293)||(19361672-19361728)
chr5 (237-293)||(37147089-37147145)
chr5 (172-293)||(42416822-42416945)
chr5 (172-293)||(7536667-7536791)
chr5 (172-293)||(25821245-25821367)
chr5 (211-293)||(29382544-29382626)
chr5 (172-293)||(30503458-30503582)
chr5 (172-293)||(30543801-30543925)
chr5 (172-290)||(39782983-39783104)
chr5 (171-293)||(788952-789076)
chr5 (323-384)||(13351442-13351503)
chr5 (237-290)||(28746312-28746365)
chr5 (237-293)||(3246851-3246907)
chr5 (340-384)||(28887096-28887140)
chr5 (237-293)||(42110710-42110766)
chr5 (237-293)||(42111803-42111859)
chr5 (333-376)||(7336339-7336382)
chr5 (172-293)||(789989-790111)
chr5 (171-224)||(28887272-28887325)
chr5 (237-293)||(31958377-31958434)
chr5 (240-293)||(43396542-43396595)
chr5 (237-293)||(1060726-1060782)
chr5 (237-293)||(2475268-2475324)
chr5 (237-293)||(4374851-4374907)
chr5 (237-293)||(6928354-6928410)
chr5 (340-376)||(11720888-11720924)
chr5 (237-293)||(16050768-16050824)
chr5 (172-293)||(24027787-24027910)
chr5 (173-284)||(30503686-30503800)
chr5 (173-284)||(30544029-30544143)
chr5 (237-293)||(31884659-31884715)
chr5 (237-293)||(35380499-35380555)
chr5 (237-293)||(36083816-36083872)
[»] scaffold0016 (2 HSPs)
scaffold0016 (12-293)||(99404-99684)
scaffold0016 (312-384)||(99299-99371)
[»] chr2 (37 HSPs)
chr2 (187-301)||(1692567-1692682)
chr2 (86-293)||(3708475-3708679)
chr2 (86-293)||(11868737-11868941)
chr2 (86-293)||(35360130-35360334)
chr2 (13-293)||(35287081-35287356)
chr2 (312-384)||(1692713-1692785)
chr2 (172-293)||(17032740-17032863)
chr2 (322-384)||(3708365-3708427)
chr2 (322-384)||(11868989-11869051)
chr2 (172-293)||(34912676-34912798)
chr2 (322-384)||(35360382-35360444)
chr2 (172-293)||(40202240-40202362)
chr2 (172-293)||(41452840-41452962)
chr2 (23-71)||(3708797-3708845)
chr2 (23-71)||(11868571-11868619)
chr2 (23-71)||(35359964-35360012)
chr2 (237-293)||(3243289-3243345)
chr2 (171-293)||(45474747-45474871)
chr2 (211-293)||(38879161-38879244)
chr2 (172-293)||(1835710-1835832)
chr2 (172-293)||(36078488-36078606)
chr2 (172-293)||(36085873-36085997)
chr2 (236-293)||(10120634-10120691)
chr2 (172-293)||(17051076-17051188)
chr2 (172-293)||(31972307-31972430)
chr2 (237-292)||(1118006-1118061)
chr2 (171-293)||(18166760-18166883)
chr2 (172-293)||(668218-668344)
chr2 (172-293)||(970978-971102)
chr2 (172-293)||(8878144-8878268)
chr2 (340-377)||(28644518-28644555)
chr2 (171-224)||(32292281-32292334)
chr2 (237-293)||(3079742-3079798)
chr2 (237-293)||(5166291-5166347)
chr2 (237-293)||(7274695-7274751)
chr2 (237-293)||(24926079-24926135)
chr2 (237-293)||(38709720-38709776)
[»] chr4 (74 HSPs)
chr4 (86-293)||(41986126-41986332)
chr4 (86-293)||(24079915-24080119)
chr4 (86-293)||(43329928-43330132)
chr4 (86-293)||(10261844-10262048)
chr4 (86-293)||(21562407-21562611)
chr4 (86-293)||(26926785-26926989)
chr4 (86-293)||(51449994-51450198)
chr4 (171-293)||(9097398-9097520)
chr4 (86-274)||(19587953-19588139)
chr4 (175-293)||(26871539-26871657)
chr4 (12-293)||(29345993-29346277)
chr4 (322-384)||(26927037-26927099)
chr4 (12-71)||(9097229-9097288)
chr4 (12-71)||(26871376-26871435)
chr4 (322-384)||(10262096-10262158)
chr4 (322-384)||(21562297-21562359)
chr4 (322-384)||(24080167-24080229)
chr4 (172-293)||(43117541-43117663)
chr4 (322-384)||(43329818-43329880)
chr4 (182-290)||(24631040-24631149)
chr4 (23-71)||(10261678-10261726)
chr4 (23-71)||(21562729-21562777)
chr4 (23-71)||(24079750-24079798)
chr4 (237-293)||(26097645-26097701)
chr4 (340-384)||(26871717-26871761)
chr4 (23-71)||(26926617-26926665)
chr4 (12-149)||(35831756-35831896)
chr4 (23-71)||(43330250-43330298)
chr4 (23-71)||(51450318-51450366)
chr4 (178-293)||(32200651-32200766)
chr4 (172-293)||(8847961-8848085)
chr4 (322-384)||(51449884-51449946)
chr4 (167-293)||(35831913-35832041)
chr4 (172-293)||(7365819-7365942)
chr4 (237-293)||(11180931-11180987)
chr4 (23-71)||(19588259-19588307)
chr4 (237-293)||(23628858-23628914)
chr4 (237-293)||(46045789-46045845)
chr4 (178-289)||(44856613-44856723)
chr4 (172-293)||(1166662-1166784)
chr4 (172-293)||(1169144-1169266)
chr4 (172-293)||(11200856-11200980)
chr4 (322-384)||(19587825-19587887)
chr4 (237-291)||(20681220-20681274)
chr4 (172-293)||(24303731-24303853)
chr4 (239-293)||(32139431-32139485)
chr4 (172-293)||(39651758-39651877)
chr4 (172-293)||(40952043-40952165)
chr4 (178-293)||(30071364-30071480)
chr4 (237-293)||(37873640-37873696)
chr4 (237-293)||(41144299-41144355)
chr4 (237-293)||(51153507-51153563)
chr4 (342-377)||(39489599-39489634)
chr4 (333-384)||(41986389-41986440)
chr4 (340-379)||(44724374-44724413)
chr4 (236-290)||(29099618-29099672)
chr4 (350-384)||(41144433-41144467)
chr4 (172-293)||(53274651-53274775)
chr4 (236-293)||(40849751-40849808)
chr4 (237-293)||(6940172-6940228)
chr4 (237-293)||(7400203-7400259)
chr4 (237-293)||(10137877-10137933)
chr4 (237-293)||(13890990-13891046)
chr4 (237-293)||(17624683-17624739)
chr4 (237-293)||(17976470-17976526)
chr4 (237-293)||(18138358-18138414)
chr4 (237-293)||(28116837-28116893)
chr4 (237-293)||(28361487-28361543)
chr4 (328-384)||(32139325-32139381)
chr4 (237-293)||(32206590-32206646)
chr4 (237-293)||(34264626-34264682)
chr4 (237-293)||(36190053-36190109)
chr4 (237-293)||(49125568-49125624)
chr4 (237-293)||(55188193-55188249)
[»] scaffold0006 (2 HSPs)
scaffold0006 (12-293)||(156355-156619)
scaffold0006 (322-384)||(156666-156728)
[»] scaffold0095 (4 HSPs)
scaffold0095 (12-293)||(247-528)
scaffold0095 (175-293)||(1737-1855)
scaffold0095 (340-384)||(143-187)
scaffold0095 (340-384)||(1633-1677)
[»] scaffold0088 (3 HSPs)
scaffold0088 (175-293)||(55329-55447)
scaffold0088 (12-71)||(55166-55225)
scaffold0088 (340-384)||(55507-55551)
[»] scaffold0038 (2 HSPs)
scaffold0038 (171-289)||(31509-31618)
scaffold0038 (12-71)||(30191-30250)
[»] scaffold0318 (1 HSPs)
scaffold0318 (178-287)||(1083-1193)
[»] scaffold0198 (1 HSPs)
scaffold0198 (237-293)||(15255-15311)
[»] scaffold0003 (1 HSPs)
scaffold0003 (237-293)||(229106-229162)
[»] scaffold0244 (1 HSPs)
scaffold0244 (237-293)||(7568-7624)
[»] scaffold0024 (1 HSPs)
scaffold0024 (172-293)||(90386-90511)
[»] scaffold0020 (1 HSPs)
scaffold0020 (172-290)||(132683-132806)
[»] scaffold0768 (1 HSPs)
scaffold0768 (211-293)||(6269-6353)
[»] scaffold0481 (1 HSPs)
scaffold0481 (237-293)||(7472-7528)
[»] scaffold0197 (1 HSPs)
scaffold0197 (237-293)||(25732-25788)
[»] scaffold0008 (1 HSPs)
scaffold0008 (341-377)||(119562-119598)


Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 12 - 384
Target Start/End: Original strand, 22762064 - 22762438
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||               |||||||||||||||||||||||||    
T  22762064 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctcagaaccatgaaaaaagaaaaaaaatgacctcttatgaagaagaaagtga 22762163  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  22762164 aacagtgtttccaactgaacttagataccgtttggccaaggtttgtttacgacttgaaacttacttcaaaacaaagttaaaataaaggcatttacgaaag 22762263  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaagctgtgaa-nnnnnnnn 309  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||             
T  22762264 aagttaaagttgtttggtttatttgattttttagttttaaagctatttttaagttaaatgttgtgtggcaaaatattgtacaaactgtgaattttttttt 22762363  T
Q  310 ggtcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22762364 ggtcgaaccccagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 22762438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 13 - 293
Target Start/End: Complemental strand, 32754452 - 32754172
Alignment:
Q  13 tgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtgaa 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||               ||||||||||||||||||||||||||    
T  32754452 tgaacccctcaagccataaaaattagtcaactcaagtcatgcatggtctcataaccatgaaaaaaggaagaaaatgacctcttatgaagaagaaagtgaa 32754353  T
Q  112 atagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaaga 211  Q
    | |||||| ||| ||||||||| |||||||||||| ||||       |||   | ||| ||||||||||||||||||||||||||| | ||||  |||||    
T  32754352 acagtgttcccagctgaacttaaataccgtttggcaaaggtttttt-acggtctaaaagttacttcaaaacaaagttaaaataaaggcctttaagaaaga 32754254  T
Q  212 agttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    || |||||||||||| | | |||  ||||||||||||||||||| ||| ||||||||| |||| || |||||||||||||||    
T  32754253 agctaaagttgtttgttttctttatttttttagttttaaagctacttttaagttaaatattgtttgacaaaatattgtacaa 32754172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 52464809 - 52465015
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||||       |||   | ||| |||||| ||||||||    
T  52464809 tgacctcttatgaagaagaaagtgaaacagtgttcccagctgaacttagataccgtttgaccaaggattttt-acggtctaaaagttacttgaaaacaaa 52464907  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    |||||||||||||| ||||  ||||||| ||||||| |||||| | |||| ||||||||||||||||||| ||| ||||||||| |||| || |||||||    
T  52464908 gttaaaataaagacctttaagaaagaagctaaagttatttggtttctttgtttttttagttttaaagctaattttaagttaaatattgtttgacaaaata 52465007  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  52465008 ttgtacaa 52465015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 8239203 - 8238922
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||||||| | |||||||               |||||||||||||||||||||||||    
T  8239203 atgaacacctcaagccataaaaatcagtcaactcaagtcatgcatggtctcataaccatgaaaaagtgaagaaaatgacctcttatgaagaagaaagtga 8239104  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || ||||||  || || ||||||||||||||||| ||||||       | | |   ||| |||||||||||||||||||||||  ||   |||| |||||    
T  8239103 aacagtgttctcagctaaacttagataccgtttgaccaaggttttttaaggtcaaaaaa-ttacttcaaaacaaagttaaaatgtaggtctttaaaaaag 8239005  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||| |||||||||||||| | |||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  8239004 aagataaagttgtttggtttctttgtttttttagttttaaagttatttttaagttaaatgttgtttggcaaaatattgtacaa 8238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 54795806 - 54796087
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||                ||||||||||||||||||||| ||     
T  54795806 atgaacccctcaagccataaaaattagtcaactcaagtcatgcatggtctcagaaccatataaaaaggaagaaaatgacctcttatgaagaagaaaatgt 54795905  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || || ||| ||| |  ||||||||||||||||||||||||         | ||  ||| |||||||||||||||||||||||||||   ||||  ||||    
T  54795906 aacagagttcccagccaaacttagataccgtttggccaaggttttttatggtcta-aaagttacttcaaaacaaagttaaaataaaggtctttaagaaag 54796004  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||  |||||||||||||| | |||| |||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||    
T  54796005 aatctaaagttgtttggtttctttgtttttttagttttaaagatatttttaaggtaaatgttgtttggcaaaatattgtacaa 54796087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 44075231 - 44075435
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  44075231 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 44075329  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||| ||  ||||| |||||||| ||||||||||    
T  44075330 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctagtt--aagtttaatgttgtttggcaaaata 44075427  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  44075428 ttgtacaa 44075435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 28169944 - 28170225
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||||||               |||||||||| ||||||||||| ||    
T  28169944 atgaacccctcaagccataaaaatcagtcaactaaagtcatgcatggtctcagaaccatgaaaaaaggaagaaaatgacctcttacgaagaagaaagaga 28170043  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || ||||||  ||  ||||||||||||||||| || ||||        |||   | ||| ||||||||||| ||| ||||||||||| | ||||  ||||    
T  28170044 aacagtgttcacagttgaacttagataccgttagggcaag-attttttacggtctaaaagttacttcaaaataaatttaaaataaaggcttttaagaaag 28170142  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||| |||||||||||||| | |||| ||||||||||| ||||||||||| |||||||||||||  ||| |||||||| |||||    
T  28170143 aagctaaagttgtttggtttctttgtttttttagtttcaaagctatttttaagttaaatgttggttgggaaaatattatacaa 28170225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 46850646 - 46850761
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtg 277  Q
    ||||||||||||||||||||   ||||  |||||||||||||||||||||| | ||   ||||||||||||||||||||||| |||||||| ||||| ||    
T  46850646 aaaacaaagttaaaataaaggtctttaagaaagaagttaaagttgtttggtttcttattttttttagttttaaagctatttttaagttaaaagttgtttg 46850745  T
Q  278 gcaaaatattgtacaa 293  Q
    ||||||||||||||||    
T  46850746 gcaaaatattgtacaa 46850761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 42617595 - 42617733
Alignment:
Q  88 acctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagt 187  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |       ||| ||  |||  ||||||||||||||||    
T  42617595 acctcttatgaagaagaaagtgaaattgtgttcccaactgaacttaggtaccgtttggccaa-gcttttttacg-ctctaaagctacttcaaaacaaagt 42617692  T
Q  188 taaaataaagacatttacaaaagaagttaaagttgtttggt 228  Q
    |||||||||| | ||||  | ||||||||||||||||||||    
T  42617693 taaaataaagtcctttaagagagaagttaaagttgtttggt 42617733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 916425 - 916360
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaagg 151  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||    
T  916425 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaagg 916360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 41990692 - 41990812
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttt-tagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   | ||  ||| |||||||||||||||||| | |||  ||||| ||||| ||||| |||||| |||||||| |    
T  41990692 tactttaaaacaaagttaaaataaagttctataagaaaaaagttaaagttgtttggtttctttattttttctagttctaaagttatttttaagttaaaag 41990791  T
Q  271 ttgtgtggcaaaatattgtac 291  Q
    |||| ||||||||||||||||    
T  41990792 ttgtttggcaaaatattgtac 41990812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 293
Target Start/End: Complemental strand, 54835839 - 54835751
Alignment:
Q  206 aaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||| |||||||||||||| | |||  |||||| ||||||||| ||||||| |||||||| ||||| ||||||||||||||||||    
T  54835839 aaaagaaggtaaagttgtttggttttttttttttttttagttttaaacctatttttaagttaaaagttgtttggcaaaatattgtacaa 54835751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 10617771 - 10617645
Alignment:
Q  169 acttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattt--tttagttttaaagctattttaaagtta 266  Q
    |||||||| ||||||||||||||||||||   |||| |||| ||| ||||| |||||| | | ||   |||  |||||||||||| ||||||| ||||||    
T  10617771 acttactttaaaacaaagttaaaataaagctctttagaaaataagctaaagctgtttgttttcttcattttcttttagttttaaaactatttttaagtta 10617672  T
Q  267 aatgttgtgtggcaaaatattgtacaa 293  Q
    || ||||| ||||||||||||||||||    
T  10617671 aaagttgtttggcaaaatattgtacaa 10617645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 916251 - 916189
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  916251 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 916189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 36987666 - 36987788
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||||||||| |||||||| | |||  |||||| | || ||||| |||||| |||||||| |    
T  36987666 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagctgtttggtttctttattttttttaattctaaagttatttttaagttaaaag 36987765  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  36987766 ttgtttggcaaaatattgtacaa 36987788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 37013105 - 37013227
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||||||||| |||||||| | |||  |||||| | || ||||| |||||| |||||||| |    
T  37013105 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagctgtttggtttctttattttttttaattctaaagttatttttaagttaaaag 37013204  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  37013205 ttgtttggcaaaatattgtacaa 37013227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 42187677 - 42187799
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||| |||||||| | |||| |||| | | ||||| |||||||| | |||  |||||| |||| ||||| |||||| |||||||| |    
T  42187677 tactttaaaacaaagtttaaataaagccctttaaaaaaaaggctaaagctgtttggtttctttattttttttagttataaagttatttttaagttaaaag 42187776  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  42187777 ttgtttggcaaaatattgtacaa 42187799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 916598 - 916550
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  916598 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 916550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 44075065 - 44075113
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  44075065 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 44075113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 46090112 - 46090168
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  46090112 ttttttagttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 46090168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 26881768 - 26881646
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| |||||||||||||||||| |||||   |||||||||| ||||| ||||||  |||||||      
T  26881768 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttgtttggtttatttattttttttagttctaaagttatttttgagttaaaaa 26881669  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| |||||||||||| |||||    
T  26881668 ctgtttggcaaaatattttacaa 26881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 44075483 - 44075545
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| |||  |||  |||||||||||||    
T  44075483 gacttggcatgtatttatgcattgttcctatcaactgagctaaagtcatgaggacaaaacttt 44075545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 54796135 - 54796197
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||| ||| |||||| ||||||||||||||| ||||| ||||||||| |||||||||||||    
T  54796135 gacttgacatatatttatgcattgttcctatcagctgagctaagctcacgaggacaaaacttt 54796197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 52464735 - 52464784
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtct 61  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||    
T  52464735 atgaacccctcaagccataaaaatcagtcaactcaagtcatgtatggtct 52464784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 20849328 - 20849454
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagt-taaagttgtttggtgtatttg---attttttagttttaaagctattttaaagtta 266  Q
    |||||| |||| ||||||||||||||| | |||| |||| |||  ||||| |||||||| | |||    ||||||||||| ||||| |||||| ||||||    
T  20849328 ttactttaaaaaaaagttaaaataaagtcctttaaaaaaaaagagtaaagctgtttggtttctttatttattttttagttctaaagttatttttaagtta 20849427  T
Q  267 aatgttgtgtggcaaaatattgtacaa 293  Q
    || | ||| ||||||||||||||||||    
T  20849428 aaagctgtttggcaaaatattgtacaa 20849454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 36918891 - 36918935
Alignment:
Q  328 gcatgtatttacgcattgttcctatcaactgagttaagctcacaa 372  Q
    |||| |||||| |||||||||||||||||||||||||||||||||    
T  36918891 gcatatatttatgcattgttcctatcaactgagttaagctcacaa 36918935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 37413717 - 37413594
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattt--tttagttttaaagctattttaaagttaaat 269  Q
    ||||| |||||||||||||||||||| | ||||  ||| ||| ||||| |||||||| | | |  |||  ||||||| ||||| |||||| |||||| |     
T  37413717 tactttaaaacaaagttaaaataaagtcctttaagaaaaaagctaaagctgtttggtttctatattttcttttagttataaagttatttttaagttacaa 37413618  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| ||||||||||||||||||    
T  37413617 gttgtttggcaaaatattgtacaa 37413594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 39721340 - 39721284
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  39721340 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 39721284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 46088647 - 46088770
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagttttaaagctattttaaagttaaat 269  Q
    ||||| |||| ||||||||||||||| | || |  ||| |||||||||||||||||| | |||  |  ||||||||| ||||| |||||| |||| |||     
T  46088647 tactttaaaataaagttaaaataaagtccttcaagaaaaaagttaaagttgtttggtttctttatttatttttagttctaaagttatttttaagtgaaaa 46088746  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| ||| ||||||||||||||    
T  46088747 gttgtttggaaaaatattgtacaa 46088770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 43316511 - 43316566
Alignment:
Q  238 tttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  43316511 tttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 43316566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 44541259 - 44541149
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtg 277  Q
    ||||||||||||||||||||   ||||  ||||||| ||||| |||||||| |  || ||||||| ||||||||| |||||| | ||| || ||||| ||    
T  44541259 aaaacaaagttaaaataaagttctttaagaaagaagctaaagctgtttggtttcgtt-atttttttgttttaaagttattttgaggttgaaagttgtttg 44541161  T
Q  278 gcaaaatattgt 289  Q
    ||||||||||||    
T  44541160 gcaaaatattgt 44541149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 28170270 - 28170332
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||||| |||||| ||||||||||||||| || || ||| ||||| |||||||||||||    
T  28170270 gacttggcatatatttatgcattgttcctatcatctaagctaaactcacgaggacaaaacttt 28170332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 36170115 - 36170165
Alignment:
Q  334 atttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||| ||||||||| |||||| |||||||||||||| |||||||||||||    
T  36170115 atttatgcattgttcatatcaattgagttaagctcacgaggacaaaacttt 36170165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 52467965 - 52468027
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||||| |||||| ||||||||||||||| ||||  ||| ||||| |||||||||||||    
T  52467965 gacttggcatatatttatgcattgttcctatcatctgaactaaactcacgaggacaaaacttt 52468027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 287
Target Start/End: Complemental strand, 33899975 - 33899858
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaat 269  Q
    |||||| ||||||||||||||||||||   ||||  ||| ||| ||||  |||||||| | |||   |||||||||| ||||| |||||| ||||||||     
T  33899975 ttactttaaaacaaagttaaaataaagttttttaagaaaaaagctaaaactgtttggtttctttattttttttagttataaagttatttttaagttaaaa 33899876  T
Q  270 gttgtgtggcaaaatatt 287  Q
    ||||| ||||||||||||    
T  33899875 gttgtttggcaaaatatt 33899858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 54835920 - 54835867
Alignment:
Q  173 acttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttg 226  Q
    |||| ||||||||||||||||||||   |||| |||||||||||||||||||||    
T  54835920 actttaaaacaaagttaaaataaaggtttttaaaaaagaagttaaagttgtttg 54835867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 7041029 - 7040906
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| |||||| ||||||||     
T  7041029 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttatttttaagttaaaa 7040930  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| || |||||||||||||||    
T  7040929 gctgtttgacaaaatattgtacaa 7040906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 12101458 - 12101514
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| || |||||||||||||||    
T  12101458 ttttttagttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaa 12101514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 14587381 - 14587437
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| ||||| ||||||||||||||||||    
T  14587381 ttttttagttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaa 14587437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 38361831 - 38361775
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||| ||||||||||||    
T  38361831 ttttttagttctaaagttatttttaagttaaaagttgtttggcagaatattgtacaa 38361775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 42617847 - 42617903
Alignment:
Q  328 gcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||| |||||| ||||||| ||||| ||||||| ||||||||| |||||||||||||    
T  42617847 gcatatatttatgcattgtccctataaactgagctaagctcacgaggacaaaacttt 42617903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 44762717 - 44762773
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| || ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  44762717 ttttttaattctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 44762773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 54113493 - 54113437
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| || |||||||||||||||    
T  54113493 ttttttagttataaagttatttttaagttaaaagttgtttgacaaaatattgtacaa 54113437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 54203740 - 54203796
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| || ||||| ||||| ||||||||||||||||||    
T  54203740 ttttttagttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaa 54203796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 5240004 - 5239914
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagttttaaagctatttt 259  Q
    ||||||||||| ||| ||||||||||  | ||||  |||||||||||||||||||||| | |||| |  ||| ||||||||| ||||||||    
T  5240004 ttacttcaaaataaaattaaaataaaagcctttaagaaagaagttaaagttgtttggtttctttgtttatttatagttttaaggctatttt 5239914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 274
Target Start/End: Original strand, 35529785 - 35529887
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| |||||||||||||||||||| | |||| |||| ||||||||| |||||||| | |||   ||||||| || ||||| |||||| |||||||| |    
T  35529785 tactttaaaacaaagttaaaataaagcccttta-aaaaaaagttaaagctgtttggtttctttattttttttaattctaaagttatttttaagttaaaag 35529883  T
Q  271 ttgt 274  Q
    ||||    
T  35529884 ttgt 35529887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 48263984 - 48264031
Alignment:
Q  328 gcatgtatttacgcattgttcctatcaactgagttaagctcacaagga 375  Q
    |||| |||||| ||||||| ||||||||||||| ||||||||||||||    
T  48263984 gcatatatttatgcattgtccctatcaactgagctaagctcacaagga 48264031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 12996777 - 12996862
Alignment:
Q  211 aagttaaagttgtttggtgtatttgat--tttttagtttt-aaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||||| | |||  |  ||||||||||| |||| |||||| |||||||| ||||| ||| ||||||||||||||    
T  12996777 aagttaaagttgtttggtttctttattgttttttagttttgaaagttatttttaagttaaaagttgtttggaaaaatattgtacaa 12996862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 29500481 - 29500357
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | |   ||  |||||||||| ||||| ||||||  |||||||    
T  29500481 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagttatttttgagttaaa 29500382  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  29500381 agctgtttggcaaaatattgtacaa 29500357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 30269010 - 30269134
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | |   ||  |||||||||| ||||| ||||||  |||||||    
T  30269010 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagttatttttgagttaaa 30269109  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  30269110 agctgtttggcaaaatattgtacaa 30269134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 35690208 - 35690262
Alignment:
Q  239 ttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||| ||||| |||||| |||||||| ||||| || |||||||||||||||    
T  35690208 ttttagttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaa 35690262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 50739301 - 50739179
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| |||| |||||||||||||||   ||||  ||| ||| ||||| |||||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  50739301 tactttaaaataaagttaaaataaagctctttaagaaaaaagctaaagctgtttggtttctttattttttttagttctaaagttatttttaagttaaaag 50739202  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| |||||||||||| |||||    
T  50739201 gtgtttggcaaaatattatacaa 50739179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 50773554 - 50773676
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| |||| |||||||||||||||   ||||  ||| ||| ||||| |||||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  50773554 tactttaaaataaagttaaaataaagctctttaagaaaaaagctaaagctgtttggtttctttattttttttagttctaaagttatttttaagttaaaag 50773653  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| |||||||||||| |||||    
T  50773654 gtgtttggcaaaatattatacaa 50773676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 1757700 - 1757737
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggaca 377  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  1757700 gcattgttcctaccaactgagttaagctcacgaggaca 1757737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 4018997 - 4018941
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  4018997 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 4018941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 7738704 - 7738660
Alignment:
Q  335 tttacgcattgttcctatcaactgagttaagctcacaaggacaaa 379  Q
    |||| ||||||| |||| |||||||||||||||||| ||||||||    
T  7738704 tttatgcattgtccctaccaactgagttaagctcacgaggacaaa 7738660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 8238889 - 8238817
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||| || |||||||||| || ||| | || |||||||||| ||||| ||| ||||| |||||||||||||    
T  8238889 tcgaactctggacttggcatatagttatgaatagttcctatcatctgagctaaactcacgaggacaaaacttt 8238817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 10617611 - 10617539
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||| |||| | | || |||||| ||||| | | ||||||||||| ||||||||| |||||||||||||    
T  10617611 tcgaaccccagaccttgtatatatttatgcattatccatatcaactgagctaagctcacgaggacaaaacttt 10617539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 13337179 - 13337124
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||| ||||||    
T  13337179 ttttttagttctaaagttatttttaagttaaa-gttgtttggcaaaatatcgtacaa 13337124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 15496464 - 15496520
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| ||| || | ||||| ||||||||||||||||||    
T  15496464 ttttttagttctaaagttatttttaagctataagttgtttggcaaaatattgtacaa 15496520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 20996328 - 20996384
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| || ||||| ||||| || |||||||||||||||    
T  20996328 ttttttagttctaaagttatttttaaattaaaagttgtttgtcaaaatattgtacaa 20996384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 32754136 - 32754064
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  |||||| ||| |||||| | |||||| |||||| ||||| ||| ||||| |||||||||||||    
T  32754136 tcgaaccccggacttgacatatatttatgaattgtttctatcacctgagctaaactcacgaggacaaaacttt 32754064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 45599261 - 45599317
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  45599261 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 45599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 47719565 - 47719509
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| || ||||| |||||| |||||||| ||||| |||||||||||| |||||    
T  47719565 ttttttaattctaaagttatttttaagttaaaagttgtttggcaaaatattatacaa 47719509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 52461108 - 52461052
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  52461108 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 52461052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 54510381 - 54510437
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  54510381 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 54510437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 54741884 - 54741828
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  54741884 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 54741828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 54835681 - 54835637
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||  |||||||||||| |||||||||||| ||||||||||    
T  54835681 gcattgtcgctatcaactgagctaagctcacaagcacaaaacttt 54835637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 28568523 - 28568804
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||               ||||||||||||||||||||||||     
T  28568523 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatgtaaaaaggaagaaaatgacctcttatgaagaagaaagtgt 28568622  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || || ||||||| ||||||||||||||||||||||||| |       |||   | ||| ||||||||||||||||||||||||||| | ||||  ||||    
T  28568623 aacagagtttccagctgaacttagataccgtttggccaatgtttttt-acggtctaaaagttacttcaaaacaaagttaaaataaaggcctttaagaaag 28568721  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||  |||| ||||||||| | |||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  28568722 aatctaaatttgtttggtttctttgtttttttagttttaaagatatttttaagttaaatgttgtttggcaaaatattgtacaa 28568804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 49223455 - 49223174
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||| ||| |||||||||               ||||  |||||||||||||||||||    
T  49223455 atgaacccatcaagccataaaaatcagtcaactcaagtcacgcatgatctcagaaccatgaaaaaaggaagaaaatgacagcttatgaagaagaaagtga 49223356  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || |||||| ||| |||||||||||||||||||||||||||       |||   | ||| ||||||||||||||||||||||||||  | ||||  ||||    
T  49223355 aacagtgttcccagctgaacttagataccgtttggccaaggtttctt-acggtctaaaagttacttcaaaacaaagttaaaataaacgcctttaagaaag 49223257  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||| |||||||| | |||| ||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  49223256 aagttaaagctgtttggtttctttgtttttttaattttaaagctatttttaagttaaatgttgtttgacaaaatattgtacaa 49223174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 23910857 - 23910972
Alignment:
Q  187 ttaaaataaagacatttacaaaagaagttaaagttgtt-tggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    ||||||||||| | ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23910857 ttaaaataaaggcctttacgaaagaagttaaagttgttgtggtttatttgattttttagttttaaagctatttttaagttaaatgttgtgtggcaaaata 23910956  T
Q  286 ttgtacaagctgtgaa 301  Q
    |||||||| |||||||    
T  23910957 ttgtacaaactgtgaa 23910972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 16032860 - 16033141
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||| |||||||||               |||| | ||||||||||||||||||    
T  16032860 atgaacccctcaagccataaaaatcagtcaactcaaatcatgcatggtctcagaaccatgcaaaaaggaagaaaatgacattttatgaagaagaaagtga 16032959  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || | |||| ||| |||||||||||||||||||| | ||||       |||   | ||| |||||||||||||||||||||||||||   ||||  |||     
T  16032960 aacaatgttcccagctgaacttagataccgtttgacaaaggtttttt-acggtctaaaagttacttcaaaacaaagttaaaataaaggtctttaagaaaa 16033058  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||| | | |||| ||||||||||||||||||| ||| |||||||||||||| || |||||||||||||||    
T  16033059 aagttaaagttgtttgttttctttgtttttttagttttaaagctacttttaagttaaatgttgtttgacaaaatattgtacaa 16033141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 288
Target Start/End: Complemental strand, 5542313 - 5542032
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||               |||| ||||||||||||||||||||    
T  5542313 atgaacccatcaagccaaaaaaatcagtcaactcaagtcatgcatggtctcagaaccatgaaaaaaggaagaaaatgacatcttatgaagaagaaagtga 5542214  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || | |||| |||  ||||||||||||||||||||||||||        || ||  ||| |||||||||||||||||||||||||||   | ||  ||||    
T  5542213 aacattgttcccatatgaacttagataccgtttggccaaggttttttaccgtcta-aaagttacttcaaaacaaagttaaaataaaggtctctaagaaag 5542115  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaa-----agctattttaaagttaaatgttgtgtggcaaaatattg 288  Q
    ||| |||||||||||||| | |||| ||||||||||||||     ||||||||| || ||||||||||| |||||||||||||    
T  5542114 aagctaaagttgtttggtttctttgtttttttagttttaatttaaagctatttttaaattaaatgttgtttggcaaaatattg 5542032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 17670132 - 17670010
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| | | |||| ||||||| |||||||| || ||| ||||||||||    
T  17670132 ttacttcaaaacaaagttaaaataaagacatttaagaaagaagctaaagttgtttgttttctttgtttttttaattttaaagttacttttaagttaaatg 17670033  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  17670032 ttgtttggcaaaatattgtacaa 17670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 293
Target Start/End: Complemental strand, 36680230 - 36679952
Alignment:
Q  15 aacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtgaaat 113  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||||               |||||||||||||||||||||||||||     
T  36680230 aacccctcaagccataaaaatcagtcaactcaagtcatgtatggtctcagaaccatgaaaaaaggaagaaaatgacctcttatgaagaagaaagtgaaac 36680131  T
Q  114 agtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaagaag 213  Q
    | |||||||| |||||||||||||| ||||| | |||        |||   | ||| ||| |||||||||||||||||||||||   ||||  | |||||    
T  36680130 aatgtttccagctgaacttagatactgtttgacaaag-attttttacggtctaaaagttaattcaaaacaaagttaaaataaaggtctttaagagagaag 36680032  T
Q  214 ttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||||||| | | |||  ||||||||||||||| ||| ||| |||| ||||||||| ||||||||||||||||||    
T  36680031 ttaaagttgtttgttttctttatttttttagttttaaatctacttttaagtaaaatgttgtttggcaaaatattgtacaa 36679952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 18091422 - 18091298
Alignment:
Q  175 ttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggt------gtatttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||||||||||||||||||||| | ||||  ||||||| ||||||||||||||      || |||  ||||||||||||||||||||||| ||||||||    
T  18091422 ttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttgtttggttactttgtttttttttttttagttttaaagctatttttaagttaaa 18091323  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  18091322 agttgtttggcaaaatattgtacaa 18091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 12247693 - 12247808
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    |||||| |||||||||||||||||||| | ||||  ||||||  |||||||||||| | | |||  ||||||||||||||||||| ||| ||||||||||    
T  12247693 ttactttaaaacaaagttaaaataaaggcctttaagaaagaaactaaagttgtttgttttctttatttttttagttttaaagctacttttaagttaaatg 12247792  T
Q  271 ttgtgtggcaaaatat 286  Q
    |||| ||| |||||||    
T  12247793 ttgtttggaaaaatat 12247808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 24473519 - 24473601
Alignment:
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||| |||||||| | |||  |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  24473519 aagttaaagctgtttggtttctttatttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 24473601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 28568848 - 28568910
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||| |||| |||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  28568848 gactttgcatatatttatgcattgttcctatcagctgagttaagctcacgaggacaaaacttt 28568910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 12246579 - 12246627
Alignment:
Q  13 tgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtct 61  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  12246579 tgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtct 12246627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 293
Target Start/End: Complemental strand, 15845905 - 15845779
Alignment:
Q  167 aaacttacttcaaaacaaagttaaaa-taaagacatttacaaaagaagttaaagttgtttggtgtatttgat-tttttagttttaaagctattttaaagt 264  Q
    |||| ||||||||||||||||||||| ||||| | ||||  ||||||||||||||||||||||   |||  | |||||||||||| | ||||||| ||||    
T  15845905 aaacctacttcaaaacaaagttaaaattaaaggc-tttaagaaagaagttaaagttgtttggttacttttttatttttagttttacaactatttttaagt 15845807  T
Q  265 taaatgttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||| |||||||||||| |||||    
T  15845806 taaa-gttgtttggcaaaatattatacaa 15845779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 18091261 - 18091189
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  ||||| | || |||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  18091261 tcgaaccccggactttgtatatatttatgcattgtccctatcaactgagttaagctcacgaggacaaaacttt 18091189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 23911002 - 23911069
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  ||||||||||||||||| |||||||||     |||||||||||||||||||||||||||||||    
T  23911002 tcgaaccccggacttggcatgtatttatgcattgttc-----aactgagttaagctcacaaggacaaaacttt 23911069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 36952640 - 36952763
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   |||| | || |||||||||||||||||| | ||  |  |||||| ||| ||||  |||||| ||||||||     
T  36952640 tactttaaaacaaagttaaaataaagttctttaaagaaaaagttaaagttgtttggtttctttattttttttttgttctaaatttatttttaagttaaaa 36952739  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| ||||||||||||||||||    
T  36952740 gttgtttggcaaaatattgtacaa 36952763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 46040480 - 46040536
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  46040480 ttttttagttttaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 46040536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 293
Target Start/End: Original strand, 44065371 - 44065492
Alignment:
Q  173 acttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagttttaaagctattttaaagttaaatg 270  Q
    |||| |||||||||||||||| |||   ||||  ||||||||||||||| |||||| || || ||  |||||||||||| |||| |||| |||||||| |    
T  44065371 actttaaaacaaagttaaaattaagggctttaagaaagaagttaaagttatttggt-tactttataatttttagttttacagctttttttaagttaaaag 44065469  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||| ||||||||||||    
T  44065470 ttgtttggcacaatattgtacaa 44065492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 11606460 - 11606517
Alignment:
Q  236 attttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||||||||||  || ||||| ||||| ||||||||||||||||||    
T  11606460 attttttagttttaaagctatttctaaattaaaagttgtttggcaaaatattgtacaa 11606517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 41916409 - 41916513
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagttttaaagctattttaaagttaaa 268  Q
    ||||||||||| ||| | ||||||||| | ||||  |||||||||||||||||||||| | |||| |  ||| ||||||||| |||||||| ||||||||    
T  41916409 ttacttcaaaataaaatcaaaataaaggcctttaataaagaagttaaagttgtttggtttctttgtttatttatagttttaaggctatttttaagttaaa 41916508  T
Q  269 tgttg 273  Q
     ||||    
T  41916509 agttg 41916513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 12247614 - 12247666
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagatac 138  Q
    ||||||||||||||||||||||||||| | |||| ||| ||||||||||||||    
T  12247614 tgacctcttatgaagaagaaagtgaaacactgttcccagctgaacttagatac 12247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 43119108 - 43119164
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  43119108 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 43119164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 21965916 - 21965967
Alignment:
Q  333 tatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||| ||||| ||| ||||||||||| |||||||||||||||||||||||    
T  21965916 tatttatgcattattcatatcaactgagctaagctcacaaggacaaaacttt 21965967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 43123186 - 43123063
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaa-gttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| |||||||||||||||||||| | |||| |||| || |  |||| |||||||| | |||   |||||||||| ||||| |||||| ||||||||     
T  43123186 tactttaaaacaaagttaaaataaagccctttaaaaaaaaaggcaaaagctgtttggtttctttattttttttagttctaaagttatttttaagttaaaa 43123087  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  43123086 gctgtttggcaaaatattgtacaa 43123063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 378
Target Start/End: Original strand, 4770659 - 4770697
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaa 378  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  4770659 gcattgttcatatcaactgagttaagctcacaaggacaa 4770697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 17670282 - 17670232
Alignment:
Q  21 tcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||| ||||||||| |||||| |||||||||||||||||| |||||||||    
T  17670282 tcaaggcataaaaataagtcaattcaagtcatgcatggtcttagaaccatg 17670232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 23730228 - 23730345
Alignment:
Q  179 aaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagtttt-aaagctattttaaagttaaatgttgtg 275  Q
    |||||||||||||||||||   ||||   || ||| |||||||||||||| | |||  |  ||||||||||| |||| |||||| |||||||| |||||     
T  23730228 aaacaaagttaaaataaagctctttaaggaataagctaaagttgtttggtttctttattgttttttagttttgaaagttatttttaagttaaaagttgtt 23730327  T
Q  276 tggcaaaatattgtacaa 293  Q
    ||||||||||||||||||    
T  23730328 tggcaaaatattgtacaa 23730345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 25659736 - 25659860
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat---tttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| |||||  |   ||||||||| ||||| ||||||  |||||||    
T  25659736 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttatttattttatttttagttctaaagttatttttgagttaaa 25659835  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  25659836 agctgtttggcaaaatattgtacaa 25659860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 23524859 - 23524818
Alignment:
Q  335 tttacgcattgttcctatcaactgagttaagctcacaaggac 376  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  23524859 tttatgcattgttccaatcaactgagttaagctcacaaggac 23524818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 33933063 - 33932947
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttg--attttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||   || |||||||||||||||||| | |||   |||||||| || ||||| |||||| || |||||     
T  33933063 tactttaaaacaaagttaaaataaagttctttaaggaaaaagttaaagttgtttggtttctttattattttttaattctaaagttatttttaaattaaaa 33932964  T
Q  270 gttgtgtggcaaaatat 286  Q
    ||||| |||||||||||    
T  33932963 gttgtttggcaaaatat 33932947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 45104321 - 45104205
Alignment:
Q  179 aaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaatgttgtgt 276  Q
    |||||||||||||||||||   ||||  ||| | |||||||||||||||| | ||  |  |||||||||| ||||| ||||||  ||||||| | ||| |    
T  45104321 aaacaaagttaaaataaagctctttaagaaaaaggttaaagttgtttggtttctttatttttttttagttctaaagttatttttgagttaaaagctgttt 45104222  T
Q  277 ggcaaaatattgtacaa 293  Q
    |||||||||||||||||    
T  45104221 ggcaaaatattgtacaa 45104205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 7308325 - 7308381
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||| | |||||| |||||||| ||||| ||||||||||||||||||    
T  7308325 ttttttagttctaatgttatttttaagttaaaagttgtttggcaaaatattgtacaa 7308381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 16033180 - 16033252
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||| ||| ||||||| |||||| | ||||||||||||| ||||||||| ||||| | |||| ||||||    
T  16033180 tcgaaccccagatttggcatatatttatgaattgttcctatcatctgagttaaactcacgatgacacaacttt 16033252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 17249183 - 17249060
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaat 269  Q
    ||||| |||||||||||||||||||| | ||||  ||| | | ||||| |||||||| | |||  ||||||  |||| ||||| |||||| ||| ||||     
T  17249183 tactttaaaacaaagttaaaataaagccctttaagaaaaaggctaaagctgtttggtttctttattttttttcagttctaaagttatttttaagctaaaa 17249084  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  17249083 gctgtttggcaaaatattgtacaa 17249060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 17669975 - 17669907
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaa 380  Q
    ||||||||  |||||||||| |||||| | ||||||||||||| ||||| ||| ||||| |||||||||    
T  17669975 tcgaaccccggacttggcatatatttatgaattgttcctatcatctgagctaaactcacgaggacaaaa 17669907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 33373747 - 33373870
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| ||||||  |||||||     
T  33373747 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttatttttgagttaaaa 33373846  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  33373847 gctgtttggcaaaatattgtacaa 33373870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 33642758 - 33642635
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| ||||||  |||||||     
T  33642758 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggttttttattttttttttagttctaaagttatttttgagttaaaa 33642659  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  33642658 gctgtttggcaaaatattgtacaa 33642635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 381
Target Start/End: Complemental strand, 5541996 - 5541937
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaac 381  Q
    |||| ||||| |||||| ||||||||||||||| ||||| ||| ||||| ||||||||||    
T  5541996 gactcggcatatatttatgcattgttcctatcatctgagctaaactcacgaggacaaaac 5541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 18091583 - 18091524
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| ||||||| |||| ||||||||| || | |||||||    
T  18091583 atgaacccctcaagccataaaaatcagtcaacacaagccatgcatggcctcaaaaccatg 18091524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 39879067 - 39879190
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattt-tttagttttaaagctattttaaagttaaat 269  Q
    |||||| |||||||||||||||||||    ||||  ||  ||||||||| |||||| | | |||  ||| ||||||| ||||| |||||| ||||||||     
T  39879067 ttactttaaaacaaagttaaaataaaactctttaagaacaaagttaaagctgtttgatttctttattttatttagttctaaagttatttttaagttaaaa 39879166  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| |||||||||||| |||||    
T  39879167 gttgtttggcaaaatattttacaa 39879190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 41032966 - 41032923
Alignment:
Q  335 tttacgcattgttcctatcaactgagttaagctcacaaggacaa 378  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||    
T  41032966 tttatgcattgttcatatcaactgagttaagctcacgaggacaa 41032923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 41916249 - 41916303
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaac 67  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  41916249 atgaacccctcaagccataaaaatcagtc-actcaagtcatgcattgtctcagaac 41916303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 12214021 - 12213987
Alignment:
Q  342 attgttcctatcaactgagttaagctcacaaggac 376  Q
    ||||||||||||||||||| |||||||||||||||    
T  12214021 attgttcctatcaactgagctaagctcacaaggac 12213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 17366281 - 17366403
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||   || ||  |||||||||||||| | |||  |||||| | || ||||| |||||| |||||||| |    
T  17366281 tactttaaaacaaagttaaaataaagctctttaaggaaaaaagtaaagttgtttggtttctttattttttttaattctaaagttatttttaagttaaaag 17366380  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||| ||||||||||||||    
T  17366381 ttgtttggtaaaatattgtacaa 17366403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 39326971 - 39327093
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| |||| |||||||||||||||   ||||  ||| | | |||||||||||||| | |||   |||||||||| ||||| ||||||  ||||||| |    
T  39326971 tactttaaaataaagttaaaataaagctctttaagaaaaaggctaaagttgtttggtttctttattttttttagttctaaagttatttttgagttaaaag 39327070  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| ||||||||||||||||||    
T  39327071 ctgtttggcaaaatattgtacaa 39327093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 39729132 - 39729254
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| |||||||| |||||||||||   |||| | || ||||||||| |||||||| | |||  |||||| | || ||||| |||||| |||||||| |    
T  39729132 tactttaaaacaaaattaaaataaagctctttaaagaaaaagttaaagctgtttggtttctttattttttttaattctaaagttatttttaagttaaaag 39729231  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| |  |||||||||||||||    
T  39729232 ttgtttcacaaaatattgtacaa 39729254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 45003721 - 45003683
Alignment:
Q  15 aacccttcaagccataaaaattagtcaactcaagtcatg 53  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  45003721 aacccctcaagccataaaaatcagtcaactcaagtcatg 45003683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 32209871 - 32209904
Alignment:
Q  342 attgttcctatcaactgagttaagctcacaagga 375  Q
    ||||||||||||||||||| ||||||||||||||    
T  32209871 attgttcctatcaactgaggtaagctcacaagga 32209904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 49222846 - 49222809
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggaca 377  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  49222846 gcattgttcctatcaattgagttaagctcacgaggaca 49222809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 1322519 - 1322575
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| || ||||| ||||| ||| ||||||||||||||    
T  1322519 ttttttagttctaaagttatttttaaattaaaagttgtttggtaaaatattgtacaa 1322575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 5553033 - 5553069
Alignment:
Q  341 cattgttcctatcaactgagttaagctcacaaggaca 377  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  5553033 cattgttcatatcaactgagttaagcccacaaggaca 5553069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 380
Target Start/End: Original strand, 6423793 - 6423833
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaa 380  Q
    ||||||||| || |||||||||||||||||| |||||||||    
T  6423793 gcattgttcataccaactgagttaagctcacgaggacaaaa 6423833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 9575009 - 9574886
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | | |||||||||||||| | ||  |  |||||||||| ||||| ||||||  |||||||     
T  9575009 tactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttgtttggtttctttatttttttttagttctaaagttatttttgagttaaaa 9574910  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | |||  |||||||||||||||||    
T  9574909 gctgttcggcaaaatattgtacaa 9574886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 11583237 - 11583181
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  11583237 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 11583181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 15382851 - 15382883
Alignment:
Q  341 cattgttcctatcaactgagttaagctcacaag 373  Q
    |||||||| ||||||||||||||||||||||||    
T  15382851 cattgttcatatcaactgagttaagctcacaag 15382883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 16097423 - 16097367
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||  |||||| |||||||| | ||| ||||||||||||||||||    
T  16097423 ttttttagttctaaaattatttttaagttaaaagctgtttggcaaaatattgtacaa 16097367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 17585596 - 17585540
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  17585596 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 17585540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Complemental strand, 17669674 - 17669638
Alignment:
Q  341 cattgttcctatcaactgagttaagctcacaaggaca 377  Q
    |||||| |||||||||||||| |||||||||||||||    
T  17669674 cattgtccctatcaactgagtcaagctcacaaggaca 17669638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 380
Target Start/End: Original strand, 26329153 - 26329193
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaa 380  Q
    ||||||||| ||||||||||| |||||| ||||||||||||    
T  26329153 gcattgttcttatcaactgagctaagctaacaaggacaaaa 26329193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 33153911 - 33153947
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggac 376  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  33153911 gcattgtccctaccaactgagttaagctcacaaggac 33153947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 33831919 - 33831975
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  33831919 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 33831975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 33894081 - 33894137
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  33894081 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 33894137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 33895211 - 33895267
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  33895211 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 33895267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 34078363 - 34078307
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| || ||||| |||||| || ||||| ||||| ||||||||||||||||||    
T  34078363 ttttttaattctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaa 34078307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 34652355 - 34652299
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| || || |||||| |||||||| ||||| || |||||||||||||||    
T  34652355 ttttttagttatacagttatttttaagttaaaagttgtttgacaaaatattgtacaa 34652299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 36679919 - 36679848
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  |||||||||| | |||| | ||||||||||||| ||||||||| ||||| |||| ||||||||    
T  36679919 tcgaaccccggacttggcatat-tttatgaattgttcctatcatctgagttaaactcacgaggaaaaaacttt 36679848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 41901694 - 41901750
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  41901694 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 41901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 47037125 - 47037181
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  47037125 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 47037181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 380
Target Start/End: Complemental strand, 49223143 - 49223075
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaa 380  Q
    ||||||||  |||||||||| |||||  | ||||||||||||| ||||| ||| ||||| |||||||||    
T  49223143 tcgaaccccggacttggcatatatttttgaattgttcctatcatctgagctaaactcacgaggacaaaa 49223075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 4490804 - 4491084
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn--tgacctcttatgaagaagaaagtg 109  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||| |||||||||                ||||||||| ||||||||||||||    
T  4490804 atgaacccctcaagccattaaaatcagtcaactcaagtcatgcatggtctcagaaccatgaaaaaaaggaagaaaatgacctcttttgaagaagaaagtg 4490903  T
Q  110 aaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaa 209  Q
    |||||||||| ||||||||||||||||| |||||||||||||       |||   | ||| ||||||||||||||||||||||||||| | ||||  |||    
T  4490904 aaatagtgttcccaactgaacttagatagcgtttggccaaggtttttt-acggtctaaaaattacttcaaaacaaagttaaaataaaggcctttaagaaa 4491002  T
Q  210 gaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||  |||||||||||||| | |||| |||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||    
T  4491003 gaaactaaagttgtttggt-tctttg-ttttttagatttaaagctattttaaagttaaatgttatttggccaaatattgtacaa 4491084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 42915652 - 42915379
Alignment:
Q  20 ttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtgaaatagtgt 118  Q
    |||||||||||||||| ||||||||||| ||||| ||||||| |||||||||               |||||| |||||||||||||||||||| |||||    
T  42915652 ttcaagccataaaaatcagtcaactcaaatcatgtatggtctcagaaccatgaaaaaaggaagaaaatgaccttttatgaagaagaaagtgaaacagtgt 42915553  T
Q  119 ttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaa 218  Q
    | ||| ||||||||||||||||||||| |||||       ||| |   ||| |||||||||||||||||||||||||||   ||||  ||||||| ||||    
T  42915552 tcccagctgaacttagataccgtttggtcaaggtttttt-acggccaaaaagttacttcaaaacaaagttaaaataaaggtctttaagaaagaagctaaa 42915454  T
Q  219 gttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||| |||||| | |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  42915453 gttatttggtttctttgtttttttagttttaaagctatttttaagttaaatgttgtttggcaaaatattgtacaa 42915379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 293
Target Start/End: Complemental strand, 47171864 - 47171663
Alignment:
Q  91 tcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaa 190  Q
    |||||||||||||||| ||||| | |||| |||  ||||||||||||| ||||||||||||       |||   | ||| ||||||||||||||||||||    
T  47171864 tcttatgaagaagaaaatgaaacaatgttcccagttgaacttagatacagtttggccaaggtttttt-acggtctaaaagttacttcaaaacaaagttaa 47171766  T
Q  191 aataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgta 290  Q
    ||||||||| ||||  ||||||| |||||||||||||| | |||| |||||| |||||||||||||||| |||||||||||||  || ||||||||||||    
T  47171765 aataaagacctttaagaaagaagctaaagttgtttggtttctttgtttttttggttttaaagctatttttaagttaaatgttgcttgacaaaatattgta 47171666  T
Q  291 caa 293  Q
    |||    
T  47171665 caa 47171663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 42828726 - 42828931
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| | | || ||||||||||||||||||| || |       |||   | ||| |||||||||||||||    
T  42828726 tgacctcttatgaagaagaaagtgaaacagtgttcctagctaaacttagataccgtttggcaaatgtttttt-acggtctaaaagttacttcaaaacaaa 42828824  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    ||||||||||||   ||||  |||||||||||||||||||| | | |||| ||||||||||||||||||| ||| |||||||||||||| || |||||||    
T  42828825 gttaaaataaaggtctttaagaaagaagttaaagttgtttgttttctttg-ttttttagttttaaagctacttttaagttaaatgttgtttgacaaaata 42828923  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  42828924 ttgtacaa 42828931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 33232472 - 33232676
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  33232472 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 33232570  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  33232571 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 33232668  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  33232669 ttgtacaa 33232676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 34284614 - 34284818
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  34284614 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 34284712  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  34284713 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 34284810  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  34284811 ttgtacaa 34284818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 20763140 - 20762936
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  20763140 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 20763042  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| || |||||||    
T  20763041 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttgacaaaata 20762944  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  20762943 ttgtacaa 20762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 29488706 - 29488502
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    |||| |||||||||||||||||||||| ||||||  | |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  29488706 tgacatcttatgaagaagaaagtgaaacagtgttctcgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 29488608  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  29488607 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 29488510  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  29488509 ttgtacaa 29488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 19036177 - 19036381
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | | | ||| |||||||||||||||    
T  19036177 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtc-taaaagttacttcaaaacaaa 19036275  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||  | ||||  ||||||  |||| || |||| | | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  19036276 gtaaaaataaaagcctttaagaaagaaactaaaattatttgctttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 19036373  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  19036374 ttgtacaa 19036381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 20718459 - 20718255
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | | | ||| |||||||||||||||    
T  20718459 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtc-taaaagttacttcaaaacaaa 20718361  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||  | ||||  ||||||  |||| || |||| | | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  20718360 gtaaaaataaaagcctttaagaaagaaactaaaattatttgctttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 20718263  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  20718262 ttgtacaa 20718255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 3840162 - 3840040
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagttttaaagctattttaaagttaaat 269  Q
    ||||| |||||||||||||||||||||  ||||  |||||||||||||||||||||| || |||||  |||||||||||| ||||||||| ||||||||     
T  3840162 tactttaaaacaaagttaaaataaagaattttaagaaagaagttaaagttgtttggt-tacttgatcatttttagttttacagctatttttaagttaaaa 3840064  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| || |||||||||||||||    
T  3840063 gttgtttgacaaaatattgtacaa 3840040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 38435779 - 38435897
Alignment:
Q  175 ttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    ||||||||||||||||||||||| | ||||  ||||||  |||||||||||||| | |||| ||| ||| ||||||||||||||| ||||||||||||||    
T  38435779 ttcaaaacaaagttaaaataaaggcctttaagaaagaatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgt 38435878  T
Q  275 gtggcaaaatattgtacaa 293  Q
     ||  ||||||||||||||    
T  38435879 ttgcaaaaatattgtacaa 38435897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 42995647 - 42995366
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg-nnnnnnnnnnnnnntgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||               |||||||||| |||||||||||||     
T  42995647 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatgaaaaaaggaagaaaatgacctcttaagaagaagaaagtgt 42995548  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || ||| || ||| | |||||  |||| |||||| |||| |       |||   | ||  ||| ||||||||||||||||||||||| | ||||  ||||    
T  42995547 aacagttttcccatccgaactctgatatcgtttgaccaatg-gtttttacggtctaaatgttatttcaaaacaaagttaaaataaaggcctttaagaaag 42995449  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||  |||||||||||||| | |||| ||| ||| ||||||||||||||| |||||||||||||| ||  ||||||||||||||    
T  42995448 aatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgtttgcaaaaatattgtacaa 42995366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 19050266 - 19050390
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagttttaaagctattttaaagttaaa 268  Q
    ||||||||||| ||| ||||||||||| | ||||  |||||||||||||||||||||| | |||| |  ||| ||||||||| |||||||| ||||||||    
T  19050266 ttacttcaaaataaaattaaaataaaggcctttaagaaagaagttaaagttgtttggtttctttgtttatttatagttttaaggctatttttaagttaaa 19050365  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| || |||||||||||||||    
T  19050366 agttgtttgacaaaatattgtacaa 19050390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 4399993 - 4400115
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| |||||||||||||||||||| | ||||  ||| |||||||||||||||||| | |||  |||||| |||| ||||| |||||| |||||||| |    
T  4399993 tactttaaaacaaagttaaaataaagccctttaagaaaaaagttaaagttgtttggtttctttatttttttcagttctaaagttatttttaagttaaaag 4400092  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| || |||||||||||||||    
T  4400093 ttgtttgacaaaatattgtacaa 4400115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 17816735 - 17816611
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttta--gttttaaagctattttaaagttaaa 268  Q
    ||||||||||| ||| ||||||||||| |  |||  |||||||||||||||||||||| | |||| || ||||  ||||||| |||||||| ||||||||    
T  17816735 ttacttcaaaataaaattaaaataaaggccattaagaaagaagttaaagttgtttggtttctttgtttatttatagttttaaggctatttttaagttaaa 17816636  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| || |||||||||||||||    
T  17816635 agttgtttgacaaaatattgtacaa 17816611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 38435616 - 38435675
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  38435616 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 38435675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 19036429 - 19036491
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||  |||||||||||||    
T  19036429 gacttggcatgtatttatgcattgttcctatcaactgagttaaactcatgaggacaaaacttt 19036491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 20718207 - 20718145
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||  |||||||||||||    
T  20718207 gacttggcatgtatttatgcattgttcctatcaactgagttaaactcatgaggacaaaacttt 20718145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 4407968 - 4408083
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgt 271  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||| ||||| |||||||| |||||   ||||||||||||||| |||||| |||||||| |     
T  4407968 tactttaaaacaaagttaaaataaagctctttaagaaaaaagctaaagctgtttggtttattt---tttttagttttaaagttatttttaagttaaaagc 4408064  T
Q  272 tgtgtggcaaaatattgta 290  Q
    ||| |||||||||||||||    
T  4408065 tgtttggcaaaatattgta 4408083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 4491119 - 4491191
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||  ||||||||||| |||||| |||||||| |||||||||||| ||||||||| |||||||||||||    
T  4491119 tcgaacctcagacttggcatatatttatgcattgttactatcaactgagctaagctcacgaggacaaaacttt 4491191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 20762888 - 20762826
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||  ||| ||||| |||||||||||||    
T  20762888 gacttggcatgtatttatgcattgttcctatcaactgaactaaactcacgaggacaaaacttt 20762826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 29488454 - 29488392
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  29488454 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 29488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 33232724 - 33232786
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  33232724 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 33232786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 34284866 - 34284928
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  34284866 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 34284928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 38049170 - 38049286
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaatgttgtg 275  Q
    ||||||||||||||||||||   ||||  |||||||||||||||||||||| | ||  |  |||||||||||||||  |||||| || ||||| |||||     
T  38049170 aaaacaaagttaaaataaagctctttaagaaagaagttaaagttgtttggtttctttattgttttttagttttaaaattatttttaaattaaaagttgtt 38049269  T
Q  276 tggcaaaatattgtaca 292  Q
    ||| |||||||||||||    
T  38049270 tggtaaaatattgtaca 38049286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 19036006 - 19036054
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  19036006 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 19036054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 20718630 - 20718582
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20718630 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 20718582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 20763305 - 20763257
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20763305 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 20763257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 29488879 - 29488831
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  29488879 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 29488831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 33232306 - 33232354
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  33232306 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 33232354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 38435957 - 38436001
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  38435957 gcattgttcctatcaactgagttaagctcacgaggacaaaacttt 38436001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 41343247 - 41343370
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattt--tttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||   || ||| ||||||||||| || | |||  |||  ||||||| ||||| |||||| |||||||||    
T  41343247 tactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaagttgttttgtttctttattttgttttagttctaaagttatttttaagttaaat 41343346  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| ||||||||||||||||||    
T  41343347 gttgtttggcaaaatattgtacaa 41343370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 42995306 - 42995262
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  42995306 gcattgttcctatcaactgagttaagctcacgaggacaaaacttt 42995262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 47171626 - 47171554
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  |||||||||| |||||| ||||||||||||||| |||||  || |||||||||||||||||||    
T  47171626 tcgaaccccggacttggcatatatttatgcattgttcctatcacctgagccaaactcacaaggacaaaacttt 47171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 34284446 - 34284493
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccat 70  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  34284446 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccat 34284493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 42828648 - 42828707
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||| | |||||||    
T  42828648 atgaacccctcaagccataaaaatcagtcaactcaagtcatacatggtctcaaaaccatg 42828707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 23154779 - 23154658
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||  |||||   || |||||||||  ||||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  23154779 tactttaaaacaaagttaaaataaagttatttaaggaaaaagttaaagccgtttggtttctttattttttttagttctaaagttatttt-aagttaaaag 23154681  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  23154680 ttgtttggcaaaatattgtacaa 23154658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 21134350 - 21134406
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  21134350 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 21134406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 42828965 - 42829037
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  || ||||||| |||||| | ||||||||||||| ||||||||| ||||| |||||||||||||    
T  42828965 tcgaaccccggatttggcatatatttatgaattgttcctatcatctgagttaaactcacgaggacaaaacttt 42829037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 378
Target Start/End: Original strand, 43539135 - 43539173
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaa 378  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  43539135 gcattgttcctatcaactgagctaagctcacaaggacaa 43539173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 47840875 - 47840753
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| || |||||||||||||||||  |||||   || ||  |||||||||||||| | |||   |||||||||| ||||| |||||| ||||| || |    
T  47840875 tactttaagacaaagttaaaataaagctatttaaggaaaaaactaaagttgtttggtttctttattttttttagttctaaagttatttttaagttgaaag 47840776  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  47840775 ttgtttggcaaaatattgtacaa 47840753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 40035956 - 40036077
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgt 271  Q
    ||||| |||| ||||||||||||||    ||||  ||| ||| ||||| |||||| | | |||  |||| ||||||||||| |||||| |||||||| ||    
T  40035956 tactttaaaataaagttaaaataaaactctttaagaaaaaaggtaaagctgtttgatttctttatttttatagttttaaagttatttttaagttaaaagt 40036055  T
Q  272 tgtgtggcaaaatattgtacaa 293  Q
    | | ||||||||||||||||||    
T  40036056 tttttggcaaaatattgtacaa 40036077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 47171935 - 47171890
Alignment:
Q  21 tcaagccataaaaattagtcaactcaagtcatgcatggtctgagaa 66  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||    
T  47171935 tcaagccataaaaattggtcaattcaagtcatgcatggtctcagaa 47171890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 1448179 - 1448123
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||||||||||  ||||||| | ||| ||||||||||||||||||    
T  1448179 ttttttagttctaaagctatttttgagttaaaagctgtttggcaaaatattgtacaa 1448123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 20482358 - 20482302
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||| | |||| || ||||| ||||| ||||||||||||||||||    
T  20482358 ttttttagttttaaagttttttttaatttaaaagttgtttggcaaaatattgtacaa 20482302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 41427108 - 41426986
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaat 269  Q
    ||||| |||||||||||||||||||  | || | |||| ||||||||| |||||||| | |||  ||||||  |||| ||||| ||||||  |||||||     
T  41427108 tactttaaaacaaagttaaaataaattctttaagaaaa-aagttaaagctgtttggtttctttatttttttgtagttctaaagttatttttgagttaaaa 41427010  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  41427009 gctgtttggcaaaatattgtacaa 41426986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 43156337 - 43156214
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| ||||||  |||||||     
T  43156337 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttatttttgagttaaaa 43156238  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  43156237 gctgtttggcaaaatattgtacaa 43156214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 40789324 - 40789202
Alignment:
Q  173 acttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaatg 270  Q
    |||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| ||||||  ||||||| |    
T  40789324 actttaaaacaaagttaaaataaagttctttaagaaaaaggttaaagctgtttggtttctttatttttttttagttataaagttatttttgagttaaaag 40789225  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| ||||||||||||||||||    
T  40789224 ctgtttggcaaaatattgtacaa 40789202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 4406553 - 4406677
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt---agttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||   || |||||||||||||||| | | |||  ||||||   ||||  |||| || ||| ||||||||    
T  4406553 tactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagttgtttgttttctttattttttttttagttccaaagttaattttaagttaaa 4406652  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  4406653 agttgtttggcaaaatattgtacaa 4406677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 4492363 - 4492484
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||||||||| |||||||  | |||   |||||||||| ||| | ||||||||| ||||| |    
T  4492363 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagctgtttggattctttattttttttagttctaaggttattttaaa-ttaaaag 4492461  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    || | ||||||||||||||||||    
T  4492462 ttatttggcaaaatattgtacaa 4492484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 29448643 - 29448767
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | |   ||  |||||||||| ||||| ||||||  |||||||    
T  29448643 tactttaaaacaaagttaaaataaagttctttaagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagttatttttgagttaaa 29448742  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  29448743 agctgtttggcaaaatattgtacaa 29448767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 383
Target Start/End: Original strand, 27993035 - 27993103
Alignment:
Q  314 gaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaactt 383  Q
    ||||||||||| | |||| | |||| ||||||||| || |||||||||||||||||| ||||||| ||||    
T  27993035 gaaccctagaccttgcatat-tttatgcattgttcataccaactgagttaagctcacgaggacaatactt 27993103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 4615455 - 4615415
Alignment:
Q  253 ctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  4615455 ctatttttaagttaaaagttgtttggcaaaatattgtacaa 4615415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 5483484 - 5483428
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||| ||| ||||| |||||| |||||||| ||||| ||| ||||||||||||||    
T  5483484 tttttttgttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaa 5483428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 10999191 - 10999135
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  10999191 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 10999135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 12907990 - 12907934
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  12907990 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 12907934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 17278233 - 17278177
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  17278233 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 17278177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 21327573 - 21327601
Alignment:
Q  340 gcattgttcctatcaactgagttaagctc 368  Q
    |||||||||||||||||||||||||||||    
T  21327573 gcattgttcctatcaactgagttaagctc 21327601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 23639342 - 23639465
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttgg--tgtatttgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | | |||||||||||||  | | |||  ||||||| || ||||| ||||||  |||||||     
T  23639342 tactttaaaacaaagttaaaataaagttctttaagaaaaaggctaaagttgtttggtttctttttttttttttaattctaaagttatttttgagttaaaa 23639441  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  23639442 gctgtttggcaaaatattgtacaa 23639465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 27031223 - 27031279
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  27031223 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 27031279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 32960790 - 32960846
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  32960790 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 32960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 38045736 - 38045680
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  38045736 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 38045680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 44651876 - 44651932
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||  ||||||||||||||    
T  44651876 ttttttagttctaaagttatttttaagttaaaagttgtttgataaaatattgtacaa 44651932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 45620728 - 45620672
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| || ||||| |||||| |||||||| | ||| ||||||||||||||||||    
T  45620728 ttttttaattctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaa 45620672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 6e-47; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 50550 - 50269
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||  ||||||||||||||| |||||| |||||||||||||||||| |||||||||               ||||||||||| ||||||||| |||    
T  50550 atgaaccactcaagccataaaaatcagtcaattcaagtcatgcatggtctcagaaccatgaaaaaaggaagaaaatgacctcttatcaagaagaaaatga 50451  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || |||||| ||| |||||||||||||||||||||| ||||         | ||| ||| ||||||||||||||||||||||||||| | ||||  ||||    
T  50450 aacagtgttcccagctgaacttagataccgtttggctaaggttttttacggtctt-aaagttacttcaaaacaaagttaaaataaaggcctttaagaaag 50352  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||| |||||||||||||| | |||| ||||||||||||||||||||||| || ||||||||||| || |||||||||||||||    
T  50351 aagctaaagttgtttggtttctttgtttttttagttttaaagctatttttaaattaaatgttgtttgacaaaatattgtacaa 50269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 58083 - 57802
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||  ||||||||||||||| |||||| |||||||||||||||||| |||||||||               ||||||||||| ||||||||| |||    
T  58083 atgaaccactcaagccataaaaatcagtcaattcaagtcatgcatggtctcagaaccatgaaaaaaggaagaaaatgacctcttatcaagaagaaaatga 57984  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || |||||| ||| |||||||||||||||||||||| ||||         | ||| ||| ||||||||||||||||||||||||||| | ||||  ||||    
T  57983 aacagtgttcccagctgaacttagataccgtttggctaaggttttttacggtctt-aaagttacttcaaaacaaagttaaaataaaggcctttaagaaag 57885  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||| |||||||||||||| | |||| ||||||||||||||||||||||| || ||||||||||| || |||||||||||||||    
T  57884 aagctaaagttgtttggtttctttgtttttttagttttaaagctatttttaaattaaatgttgtttgacaaaatattgtacaa 57802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 50235 - 50163
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  |||||||||| |||||| ||||| ||||||||| |||||  || |||||||||||||||||||    
T  50235 tcgaaccccggacttggcatatatttatgcattattcctatcatctgagccaaactcacaaggacaaaacttt 50163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 57768 - 57696
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  |||||||||| |||||| ||||| ||||||||| |||||  || |||||||||||||||||||    
T  57768 tcgaaccccggacttggcatatatttatgcattattcctatcatctgagccaaactcacaaggacaaaacttt 57696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 9e-46; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 45296629 - 45296835
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||| |||||       |||   | ||| |||||||||||||||    
T  45296629 tgacctcttatgaagaagaaagtgaaaccgtgttcccagctgaacttagataccgtttggtcaaggtttttt-acggtctaaaagttacttcaaaacaaa 45296727  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    |||||||||||| | ||||  ||||||| ||||||| |||| | | |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  45296728 gttaaaataaaggcctttaagaaagaagctaaagttatttgatttctttgtttttttagttttaaagctatttttaagttaaatgttgtttggcaaaata 45296827  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  45296828 ttgtacaa 45296835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 39201665 - 39201543
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||||||||||||||||||||||||| ||||||  ||||||| |||||||||||||| | |||  ||||| ||||||||| ||||||||||||||||||    
T  39201665 ttacttcaaaacaaagttaaaataaaggcatttaagaaagaagataaagttgtttggtttctttattttttaagttttaaaactattttaaagttaaatg 39201566  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  39201565 ttgtttggcaaaatattgtacaa 39201543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 20665438 - 20665642
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||       ||    | ||| |||||||||||||||    
T  20665438 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggtttttt-acattataaaagttacttcaaaacaaa 20665536  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  20665537 gtaaaaataaaggcctttatgaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 20665634  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  20665635 ttgtacaa 20665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 41905050 - 41904779
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn--tgacctcttatgaagaagaaagtg 109  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||                 ||||||||||||||||||||||||    
T  41905050 atgaacccctcaagccataaaaaccagtcaactcaagtcatgcatggtctcagaaccataaaaaaaaggaagaaattgacctcttatgaagaagaaagtg 41904951  T
Q  110 aaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaa 209  Q
    ||| |||||| ||| |||||||||||||||||||||||||||       |||  || ||| ||||| |||||||||| |            ||||  |||    
T  41904950 aaacagtgttcccagctgaacttagataccgtttggccaaggtttttt-acggtttaaaagttactacaaaacaaaggtc-----------tttaagaaa 41904863  T
Q  210 gaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||| |||||||||||||| | |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  41904862 gaagctaaagttgtttggtttctttgtttttttagttttaaagctatttttaagttaaatgttgtttggcaaaatattgtacaa 41904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 30550801 - 30551005
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| | |||         | ||  ||| |||||||||||||||    
T  30550801 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcgaggttttttacagtcta-aaagttacttcaaaacaaa 30550899  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| || |||||||    
T  30550900 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttgacaaaata 30550997  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  30550998 ttgtacaa 30551005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 44215550 - 44215754
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | | | ||| ||||||||||||||     
T  44215550 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtc-taaaagttacttcaaaacaat 44215648  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| || |||||||    
T  44215649 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttgacaaaata 44215746  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  44215747 ttgtacaa 44215754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 19245734 - 19245452
Alignment:
Q  20 ttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtgaaatagtgt 118  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||               ||||||||||||||||||||||||||| | |||    
T  19245734 ttcaagccataaaaatcagtcaactcaagtcatgtatggtctcagaaccatgaaaaaacgaagaaaatgacctcttatgaagaagaaagtgaaacaatgt 19245635  T
Q  119 ttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaa 218  Q
    | ||| |||||||||||||||||||||||||||       |||   | ||| |||||||||||  |||||||||||||  | ||||  ||||||| ||||    
T  19245634 tcccagctgaacttagataccgtttggccaagg-ttttttacgttctaaaagttacttcaaaatgaagttaaaataaatgcctttaagaaagaagctaaa 19245536  T
Q  219 gttgtttggtgtatttg---------attttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||| |||||| | ||||          ||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  19245535 gttatttggtttctttgttttttttttttttttaattttaaagctattttgaagttaaatgttgtttgacaaaatattgtacaa 19245452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 19318918 - 19318636
Alignment:
Q  20 ttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtgaaatagtgt 118  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||               ||||||||||||||||||||||||||| | |||    
T  19318918 ttcaagccataaaaatcagtcaactcaagtcatgtatggtctcagaaccatgaaaaaacgaagaaaatgacctcttatgaagaagaaagtgaaacaatgt 19318819  T
Q  119 ttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaa 218  Q
    | ||| |||||||||||||||||||||||||||       |||   | ||| |||||||||||  |||||||||||||  | ||||  ||||||| ||||    
T  19318818 tcccagctgaacttagataccgtttggccaagg-ttttttacgttctaaaagttacttcaaaatgaagttaaaataaatgcctttaagaaagaagctaaa 19318720  T
Q  219 gttgtttggtgtatttg---------attttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||| |||||| | ||||          ||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  19318719 gttatttggtttctttgttttttttttttttttaattttaaagctattttgaagttaaatgttgtttgacaaaatattgtacaa 19318636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 12251410 - 12251528
Alignment:
Q  175 ttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    ||||||||||||||||||||||| | ||||  ||||||  |||||||||||||| | |||| ||| ||| ||||||||||||||| ||||||||||||||    
T  12251410 ttcaaaacaaagttaaaataaaggcctttaagaaagaatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgt 12251509  T
Q  275 gtggcaaaatattgtacaa 293  Q
     ||  ||||||||||||||    
T  12251510 ttgcaaaaatattgtacaa 12251528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 39443961 - 39443680
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg-nnnnnnnnnnnnnntgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||               |||||||||| |||||||||||||     
T  39443961 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatgaaaaaaggaagaaaatgacctcttaagaagaagaaagtgt 39443862  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || ||| || ||| | |||||  |||| |||||| |||| |       |||   | ||  ||| ||||||||||||||||||||||| | ||||  ||||    
T  39443861 aacagttttcccatccgaactctgatatcgtttgaccaatg-gtttttacggtctaaatgttatttcaaaacaaagttaaaataaaggcctttaagaaag 39443763  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||  |||||||||||||| | |||| ||| ||| ||||||||||||||| |||||||||||||| ||  ||||||||||||||    
T  39443762 aatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgtttgcaaaaatattgtacaa 39443680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 22947652 - 22947774
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    |||||| |||||||||||||||||||| | ||||  ||||||  |||||||||||| | | |||  ||||||||||||||||||| ||| ||||||||||    
T  22947652 ttactttaaaacaaagttaaaataaaggcctttaagaaagaaactaaagttgtttgttttctttatttttttagttttaaagctacttttaagttaaatg 22947751  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||| ||||||| ||||||    
T  22947752 ttgtttggaaaaatatcgtacaa 22947774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 12251247 - 12251306
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  12251247 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 12251306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 36059204 - 36059326
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattt-tttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||| ||||||||   |||| | || |||||||||||||||||| | |||  ||| ||||||| ||||| |||||| |||||||| |    
T  36059204 tactttaaaacaaagttcaaataaagttctttaaagaaaaagttaaagttgtttggtttctttattttatttagttctaaagttatttttaagttaaaag 36059303  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  36059304 ttgtttggcaaaatattgtacaa 36059326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 44215802 - 44215864
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  44215802 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcacgaggacaaaacttt 44215864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 29431545 - 29431486
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  29431545 atgaacccctcaagccataaaaatcaatcaactcaagtcatgcatggtctcagaaccatg 29431486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 20665690 - 20665752
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  20665690 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 20665752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 27878104 - 27877990
Alignment:
Q  180 aacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt-atttgattttttagttttaaagctattttaaagttaaatgttgtgtgg 278  Q
    |||||||||||||||||| ||||||  ||||||| ||||| |||||||| |  ||   |||||||||||||||| || ||| |||||||| ||||| ||     
T  27878104 aacaaagttaaaataaagtcatttaagaaagaaggtaaagctgtttggtttcgttattttttttagttttaaagttagttttaagttaaaagttgtttga 27878005  T
Q  279 caaaatattgtacaa 293  Q
    |||||||||||||||    
T  27878004 caaaatattgtacaa 27877990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 27915048 - 27914934
Alignment:
Q  180 aacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt-atttgattttttagttttaaagctattttaaagttaaatgttgtgtgg 278  Q
    |||||||||||||||||| | ||||  ||||||| ||||| |||||||| |  ||   |||||||||||||||| || ||| |||||||| ||||| |||    
T  27915048 aacaaagttaaaataaagtcctttaagaaagaaggtaaagctgtttggtttcgttattttttttagttttaaagttacttttaagttaaaagttgtttgg 27914949  T
Q  279 caaaatattgtacaa 293  Q
    |||||||||||||||    
T  27914948 caaaatattgtacaa 27914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 27961467 - 27961353
Alignment:
Q  180 aacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt-atttgattttttagttttaaagctattttaaagttaaatgttgtgtgg 278  Q
    |||||||||||||||||| | ||||  ||||||| ||||| |||||||| |  ||   |||||||||||||||| || ||| |||||||| ||||| |||    
T  27961467 aacaaagttaaaataaagtcctttaagaaagaaggtaaagctgtttggtttcgttattttttttagttttaaagttacttttaagttaaaagttgtttgg 27961368  T
Q  279 caaaatattgtacaa 293  Q
    |||||||||||||||    
T  27961367 caaaatattgtacaa 27961353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 28018285 - 28018171
Alignment:
Q  180 aacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt-atttgattttttagttttaaagctattttaaagttaaatgttgtgtgg 278  Q
    |||||||||||||||||| ||||||  ||||||| ||||| |||||||| |  ||   |||||||||||||||| || ||| |||||||| ||||| ||     
T  28018285 aacaaagttaaaataaagtcatttaagaaagaaggtaaagctgtttggtttcgttattttttttagttttaaagttagttttaagttaaaagttgtttga 28018186  T
Q  279 caaaatattgtacaa 293  Q
    |||||||||||||||    
T  28018185 caaaatattgtacaa 28018171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 45138978 - 45139100
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||   || ||||||||| |||||||| | |||   |||||||||||||||| |||||| |||||||| |    
T  45138978 tactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagctgtttggtttctttattttttttagttttaaagttatttttaagttaaaag 45139077  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    ||||  |||||||||||||||||    
T  45139078 ttgttcggcaaaatattgtacaa 45139100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 12251588 - 12251632
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  12251588 gcattgttcctatcaactgagttaagctcacgaggacaaaacttt 12251632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 20665272 - 20665320
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20665272 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 20665320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 30550635 - 30550683
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  30550635 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 30550683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 39443620 - 39443576
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  39443620 gcattgttcctatcaactgagttaagctcacgaggacaaaacttt 39443576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 44215385 - 44215433
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  44215385 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 44215433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 39140725 - 39140848
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt-tgattttttagttttaaagctattttaaagttaaat 269  Q
    |||||| ||||||||||||||||||||   ||||  ||| ||||||||| |||||||| | ||    ||||||||||||||| ||| ||| ||||||||     
T  39140725 ttactttaaaacaaagttaaaataaagttctttaagaaaaaagttaaagctgtttggtttcttaattttttttagttttaaaactaattttaagttaaaa 39140824  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| | ||||||||||||||||    
T  39140825 gttgtttagcaaaatattgtacaa 39140848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 11579338 - 11579216
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| |||||||||||||||||||    |||| | || ||||||||| |||||||| | |||  |||||| |||| ||||| |||||| |||||||| |    
T  11579338 tactttaaaacaaagttaaaataaacctttttaaagaaaaagttaaagctgtttggtttctttattttttttagttctaaagttatttttaagttaaaag 11579239  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||| ||||||||||||||    
T  11579238 ttgtttggtaaaatattgtacaa 11579216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 27748976 - 27748864
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggt---gtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    |||| ||||||||||||||| | ||||  ||||||||||||  ||||||||   ||  ||  |||||||||||||||| |||||| |||||||| |||||    
T  27748976 aaaataaagttaaaataaagtcttttaagaaagaagttaaaactgtttggtttcgttattttttttttagttttaaagttatttttaagttaaaagttgt 27748877  T
Q  275 gtggcaaaatatt 287  Q
     ||||||||||||    
T  27748876 ttggcaaaatatt 27748864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 30551053 - 30551115
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| |||||||||| |||||||||| ||| ||||  |||||||||||||    
T  30551053 gacttggcatgtatttatgcattgttccaatcaactgagctaaactcatgaggacaaaacttt 30551115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 34997676 - 34997554
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| |||||||||||||||||||  | |||| | || ||  |||||||||||||| | |||  |||||| |||| || || |||||| |||||||| |    
T  34997676 tactttaaaacaaagttaaaataaatccctttaaataaaaaactaaagttgtttggtttctttattttttttagttctatagttatttttaagttaaaag 34997577  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  34997576 ttgtttggcaaaatattgtacaa 34997554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 38139459 - 38139335
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattt---tttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||   || ||| |||||||||||||| | |||  |||   ||||||| ||||| |||||| ||||||||    
T  38139459 tactttaaaacaaagttaaaataaagctctttaaggaaaaaggtaaagttgtttggtttctttattttatttttagttctaaagttatttttaagttaaa 38139360  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  38139359 agttgtttggcaaaatattgtacaa 38139335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 39525598 - 39525480
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   | ||  ||| |||||||||||||||||| | |||  |||||| |||| ||||| |||||| || ||||| |    
T  39525598 tactttaaaacaaagttaaaataaagctctataagaaaaaagttaaagttgtttggtttctttattttttttagttctaaagttatttttaatttaaaag 39525499  T
Q  271 ttgtgtggcaaaatattgt 289  Q
    |||| ||||||||||||||    
T  39525498 ttgtttggcaaaatattgt 39525480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 41526455 - 41526333
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||  |||||||||||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  41526455 tactttaaaacaaagttaaaataaagctctttaagaaaaaaactaaagttgtttggtttctttattttttttagttctaaagttatttttaagttaaaag 41526356  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| | ||||||||||||||||    
T  41526355 ttgtttagcaaaatattgtacaa 41526333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 2184404 - 2184460
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||||||||||| | ||| ||||||||||||||||||    
T  2184404 ttttttagttctaaagttattttaaagttaaaagctgtttggcaaaatattgtacaa 2184460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 7219525 - 7219402
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| ||||||  |||||||     
T  7219525 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttatttttgagttaaaa 7219426  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| ||||||||||||||||||    
T  7219425 gttgtttggcaaaatattgtacaa 7219402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 22947573 - 22947625
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagatac 138  Q
    ||||||||||||||||||||||||||| | |||| ||| ||||||||||||||    
T  22947573 tgacctcttatgaagaagaaagtgaaacactgttcccagctgaacttagatac 22947625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 36216504 - 36216626
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| |||| ||| |||||||||||   |||| |||| | |||||||||||||||| | |||  |||||| |||| ||||| ||||||  ||||||| |    
T  36216504 tactttaaaaaaaaattaaaataaagttctttaaaaaaaaggttaaagttgtttggtttctttattttttttagttctaaagttatttttgagttaaaag 36216603  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| |||||||||||| |||||    
T  36216604 ttgtttggcaaaatattatacaa 36216626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 37034902 - 37034848
Alignment:
Q  239 ttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  37034902 ttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 37034848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 39201819 - 39201769
Alignment:
Q  21 tcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||||  ||||||||||||||||||||||||| | |||||||    
T  39201819 tcaagccataaaaaccagtcaactcaagtcatgcatggtctcaaaaccatg 39201769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 290
Target Start/End: Original strand, 41903062 - 41903175
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt-atttgattttttagttttaaagctattttaaagttaaatgttgtgt 276  Q
    ||||||||| |||||||||| | ||||  ||||||| |||||||||||||| | |||   ||||||| |||| ||  |||||| ||||||||  |||| |    
T  41903062 aaaacaaagataaaataaagtcttttaagaaagaagctaaagttgtttggtttcattattttttttaattttgaatttatttttaagttaaaatttgttt 41903161  T
Q  277 ggcaaaatattgta 290  Q
    ||||||||||||||    
T  41903162 ggcaaaatattgta 41903175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 42844382 - 42844302
Alignment:
Q  215 taaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||| | |||  ||||||  |||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  42844382 taaagttgtttggtttctttatttttttctagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 42844302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 11924914 - 11924791
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaat 269  Q
    ||||| |||||||||||||||||||  | ||||  ||| ||| ||||| |||||||| | |||  ||||||  |||| ||||| |||||| ||||||||     
T  11924914 tactttaaaacaaagttaaaataaaaccctttaagaaaaaagctaaagctgtttggtttttttattttttttcagttctaaagttatttttaagttaaaa 11924815  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| || |||||||||||||||    
T  11924814 gctgtttgacaaaatattgtacaa 11924791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 27467860 - 27467735
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt----atttgattttttagttttaaagctattttaaagttaa 267  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| |    ||||  |||||||||| ||||| ||||||  ||||||    
T  27467860 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttatttttttttttagttctaaagttatttttgagttaa 27467761  T
Q  268 atgttgtgtggcaaaatattgtacaa 293  Q
    | | ||| ||||||||||||||||||    
T  27467760 aagctgtttggcaaaatattgtacaa 27467735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 39486022 - 39486078
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| || || |||||| |||||||| ||||| ||||||||||||||||||    
T  39486022 ttttttagttctacagttatttttaagttaaaagttgtttggcaaaatattgtacaa 39486078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 42984070 - 42984014
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||| ||||||||||||||    
T  42984070 ttttttagttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaa 42984014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 169632 - 169755
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagt-taaagttgtttggtgtatttgatt-ttttagttttaaagctattttaaagttaaat 269  Q
    ||||| |||| ||||||||||||||| | |||| |||| |||  ||||| |||||||| | |||  || |||||||| ||||| |||||| ||||||||     
T  169632 tactttaaaataaagttaaaataaagtcctttaaaaaaaaaggctaaagctgtttggtttctttatttcttttagttctaaagttatttttaagttaaaa 169731  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
      ||| ||||||||||||||||||    
T  169732 actgtttggcaaaatattgtacaa 169755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 12261397 - 12261520
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagtt-aaat 269  Q
    ||||| |||| |||||||||||||||   ||||   || ||||||||| |||||||| | |||   |||||||||||||||| |||||| ||||| |||     
T  12261397 tactttaaaataaagttaaaataaagttctttaaggaaaaagttaaagctgtttggtttctttattttttttagttttaaagttatttttaagttaaaaa 12261496  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| || |||||||||||||||    
T  12261497 gttgtttgacaaaatattgtacaa 12261520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 29431469 - 29431426
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaa 129  Q
    |||||||||||||||||||||| |||| |||||||||| |||||    
T  29431469 tgacctcttatgaagaagaaagggaaacagtgtttccagctgaa 29431426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 45296562 - 45296601
Alignment:
Q  20 ttcaagccataaaaattagtcaactcaagtcatgcatggt 59  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  45296562 ttcaagccataaaaatcagtcaactcaagtcatgtatggt 45296601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 1877507 - 1877628
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| |||| |||| ||||||||||   |||| |||| ||| |||||||||||||| | |||  |||||| |||| ||| | |||||| ||||||||      
T  1877507 tactttaaaataaagataaaataaagctctttaaaaaa-aaggtaaagttgtttggtttctttattttttttagttctaacgttatttttaagttaaaaa 1877605  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  1877606 ttgtttggcaaaatattgtacaa 1877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 44602872 - 44602988
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaatgttgtg 275  Q
    ||||||||||||||||||||   ||||| ||| | | |||||||||||||| | ||  |  |||||||||| ||||| ||||||  ||||||| | |||     
T  44602872 aaaacaaagttaaaataaagctctttacgaaa-aggctaaagttgtttggtttctttatttttttttagttctaaagttatttttgagttaaaagctgtt 44602970  T
Q  276 tggcaaaatattgtacaa 293  Q
    ||||||||||||||||||    
T  44602971 tggcaaaatattgtacaa 44602988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 23620645 - 23620682
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagt 49  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  23620645 atgaacccctcaagccataaaaatcagtcaactcaagt 23620682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 2190641 - 2190697
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||  |||||| |||||||| | ||| ||||||||||||||||||    
T  2190641 ttttttagttctaaaattattttgaagttaaaagctgtttggcaaaatattgtacaa 2190697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 6816111 - 6816055
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| | ||| || |||||||||||||||    
T  6816111 ttttttagttctaaagttatttttaagttaaaagctgtttgacaaaatattgtacaa 6816055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 14718946 - 14718890
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  14718946 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 14718890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 15310364 - 15310308
Alignment:
Q  328 gcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||| |||||| |||||||   ||||||||||| ||||||||| |||||||||||||    
T  15310364 gcatatatttatgcattgtctatatcaactgagctaagctcacgaggacaaaacttt 15310308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 15490733 - 15490677
Alignment:
Q  328 gcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||| |||||| |||||||   ||||||||||| ||||||||| |||||||||||||    
T  15490733 gcatatatttatgcattgtctatatcaactgagctaagctcacgaggacaaaacttt 15490677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 17046004 - 17046060
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  17046004 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 17046060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 17313535 - 17313591
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  17313535 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 17313591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 34997500 - 34997444
Alignment:
Q  328 gcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||| |||||| |||||||   ||||||||||| ||||||||| |||||||||||||    
T  34997500 gcatatatttatgcattgtctatatcaactgagctaagctcacgaggacaaaacttt 34997444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 38909366 - 38909310
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||  || |||||||||||||||    
T  38909366 ttttttagttctaaagttatttttaagttaaaagttgcttgacaaaatattgtacaa 38909310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 39685502 - 39685446
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  39685502 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 39685446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 33976230 - 33976025
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||| ||||||||| ||| |       |||   | ||| |||||||||||||||    
T  33976230 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagacaccgtttggtcaaaggttttttacggtctaaaagttacttcaaaacaaa 33976131  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    |||||||||||| | ||||  ||||||| |||||||||||||| | |||| ||||||||||||||||||||||  |||||||||||||| || |||||||    
T  33976130 gttaaaataaaggcttttaagaaagaagctaaagttgtttggtttctttgtttttttagttttaaagctattt--aagttaaatgttgtttgacaaaata 33976033  T
Q  286 ttgtacaa 293  Q
    || |||||    
T  33976032 ttatacaa 33976025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 12582304 - 12582508
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  12582304 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 12582402  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  12582403 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 12582500  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  12582501 ttgtacaa 12582508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 247645 - 247441
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||       ||    | ||| |||||||||||||||    
T  247645 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggtttttt-acattataaaagttacttcaaaacaaa 247547  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  247546 gtaaaaataaaggcctttatgaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 247449  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  247448 ttgtacaa 247441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 18313981 - 18313919
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  18313981 gacttggcatgtatttatgcattgttcctatcaactgagttaagctcacgaggacaaaacttt 18313919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 18314104 - 18314029
Alignment:
Q  218 agttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||| |||||| ||||||||||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  18314104 agttatttggtttatttgatttttttgttttaaagttatttttaatttaaatgttgtgtggcaaaatattgtacaa 18314029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 3053720 - 3053862
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn---tgacctcttatgaagaagaaagt 108  Q
    |||||||| ||||| ||||||||| ||||||||| ||||||||||||||| |||||||||                 ||||||| |||||||||||||||    
T  3053720 atgaacccctcaagtcataaaaatcagtcaactctagtcatgcatggtctcagaaccatgaaaaaaaaggaagaaaatgacctcatatgaagaagaaagt 3053819  T
Q  109 gaaatagtgtttccaactgaacttagataccgtttggccaagg 151  Q
    |||||||||||  || ||||||||||||||| |||||||||||    
T  3053820 gaaatagtgttctcagctgaacttagataccatttggccaagg 3053862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 3053911 - 3053965
Alignment:
Q  239 ttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  3053911 ttttagttttaaagctatttttaagttaaatgttgtttggcaaaatattgtacaa 3053965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 28231012 - 28231121
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||||||||||||||||||||||||| | ||||  ||||||| |||||||||||| |         ||||||||||||||| || ||| ||||||||||    
T  28231012 ttacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttgtttgtt---------tttttagttttaaagttacttttaagttaaatg 28231102  T
Q  271 ttgtgtggcaaaatattgt 289  Q
    |||| ||||||||||||||    
T  28231103 ttgtttggcaaaatattgt 28231121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 28472369 - 28472245
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttg---attttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||| |||||||||||||| | |||    ||||||||||| ||||| |||||| ||||||||    
T  28472369 tactttaaaacaaagttaaaataaagctctttaagaaaaaagataaagttgtttggtttctttatttattttttagttctaaagttatttttaagttaaa 28472270  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  28472269 agttgtttggcaaaatattgtacaa 28472245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 3054003 - 3054075
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||| ||||||||||| ||| |||||| |||||||||||||||| |||| ||||||||| |||||||||||||    
T  3054003 tcgagccctagacttgacatatatttatgcattgttcctatcaattgagctaagctcacgaggacaaaacttt 3054075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 8867111 - 8866990
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttga---ttttttagttttaaagctattttaaagttaaa 268  Q
    ||||| |||| ||||||||||| |||   ||||  ||||||||||||||||||| ||   ||| |   ||||||||||||||||||||||| ||||||||    
T  8867111 tactttaaaataaagttaaaattaagggttttaagaaagaagttaaagttgtttagttactttaaattttttttagttttaaagctatttttaagttaaa 8867012  T
Q  269 tgttgtgtggcaaaatattgta 290  Q
     ||||| |||||||||||||||    
T  8867011 agttgtttggcaaaatattgta 8866990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 28229693 - 28229752
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  28229693 atgaacccctcaagccataaaaatcagtcaattcaagtcatgcatggtctcagaaccatg 28229752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 33976407 - 33976348
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  33976407 atgaaccccttaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 33976348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 247393 - 247331
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  247393 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 247331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 247811 - 247763
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  247811 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 247763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 12582140 - 12582188
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  12582140 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 12582188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 29043308 - 29043232
Alignment:
Q  216 aaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtaca 292  Q
    ||||||||||||| | |||  |||||||||| ||||| |||||| |||||||| ||||| |||||||||||||||||    
T  29043308 aaagttgtttggtttctttatttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtaca 29043232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 3090713 - 3090772
Alignment:
Q  89 cctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggcca 148  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||||||| || ||||||    
T  3090713 cctcttatgaagaagaaagtgaaacagtgttcccagctgaacttagatacagtgtggcca 3090772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 19989036 - 19988914
Alignment:
Q  172 tacttcaaaacaaagttaaaataaaga-catttacaaaagaagttaaagttgtttggtgtatttgattttt-tagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||  | |||| |||| | || |||| |||||||| | |||  ||||| ||||| ||||| |||||| ||||||||     
T  19989036 tactttaaaacaaagttaaaataaagctcttttagaaaaaatgt-aaagctgtttggtttctttattttttatagttctaaagttatttttaagttaaaa 19988938  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||||||||||||||||||||||    
T  19988937 gttgtgtggcaaaatattgtacaa 19988914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 559875 - 559751
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaa 268  Q
    |||||| ||||||||||||||||||||   ||||  ||| | |||||||||||||||| | |||  ||||||  |||| ||||| ||||||  |||||||    
T  559875 ttactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagttgtttggtttctttatttttttgtagttctaaagttatttttgagttaaa 559776  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  559775 agctgtttggcaaaatattgtacaa 559751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 3090635 - 3090684
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtct 61  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  3090635 atgaacctctcaagccataaaaatcagtcaactcaagtcatgcatggtct 3090684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 6018500 - 6018624
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaa 268  Q
    |||||| ||||||||||||||||||||   ||||   || ||||||||| |||||||| | ||  |  |||||||| | ||||| |||||| ||||||||    
T  6018500 ttactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagctgtttggtttctttatttttttttagatctaaagttatttttaagttaaa 6018599  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  6018600 agttgtttggcaaaatattgtacaa 6018624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 5414556 - 5414612
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  5414556 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 5414612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 18314196 - 18314148
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  18314196 aagccataaaaatcagtcaactcaagtcatacatggtcttagaaccatg 18314148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 33975987 - 33975915
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  |||||| ||| |||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  33975987 tcgaaccccggacttgacatatatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 33975915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 7541251 - 7541129
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||   || ||| ||||| |||||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  7541251 tactttaaaacaaagttaaaataaagctctttaaggaaaaagctaaagctgtttggtttctttattttttttagttctaaagttatttttaagttaaaag 7541152  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||| ||||||||    
T  7541151 ttgtttggcaaaatgttgtacaa 7541129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 8872731 - 8872681
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatatt 287  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||||||||||    
T  8872731 ttttttagttttaaagctatttttaagttaaaacttgtttggcaaaatatt 8872681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 12582556 - 12582618
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||| |||||||||| ||||||||||||||||||||  ||| ||||  |||||||||||||    
T  12582556 gacttgacatgtatttatgcattgttcctatcaactgaactaaactcatgaggacaaaacttt 12582618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 34247683 - 34247805
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||   || ||||||||| |||||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  34247683 tactttaaaacaaagttaaaataaagttctttaaggaaaaagttaaagctgtttggtttctttattttttttagttctaaagttatttttaagttaaaag 34247782  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||  ||||||||||||||    
T  34247783 ttgtttgaaaaaatattgtacaa 34247805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 24046490 - 24046610
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgt 271  Q
    ||||| |||||||||||||||||||   |||||  ||| | | ||||| |||||  | ||||| ||||||||||| ||||| ||||||  ||||||| |     
T  24046490 tactttaaaacaaagttaaaataaaactatttaagaaaaaggctaaagctgtttctt-tattttattttttagttctaaagttatttttgagttaaaagc 24046588  T
Q  272 tgtgtggcaaaatattgtacaa 293  Q
    ||| ||||||||||||||||||    
T  24046589 tgtttggcaaaatattgtacaa 24046610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 34206997 - 34207053
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||| ||||||||||||||    
T  34206997 ttttttagttctaaagttatttttaagttaaaagttgtttggaaaaatattgtacaa 34207053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 34319223 - 34319168
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||| |||||| ||||||| |||||||||||||| || |||||||||||||||    
T  34319223 ttttttagatttaaa-ctatttttaagttaaatgttgtttgacaaaatattgtacaa 34319168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 380
Target Start/End: Complemental strand, 1225220 - 1225191
Alignment:
Q  351 atcaactgagttaagctcacaaggacaaaa 380  Q
    ||||||||||||||||||||||||||||||    
T  1225220 atcaactgagttaagctcacaaggacaaaa 1225191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 6833659 - 6833575
Alignment:
Q  211 aagttaaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||||| | |||  ||||||  || | ||||  |||||| |||||||| ||||| ||||||||||||||||||    
T  6833659 aagttaaagttgtttggtttctttatttttttttagatctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaa 6833575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 369
Target Start/End: Original strand, 21941486 - 21941519
Alignment:
Q  336 ttacgcattgttcctatcaactgagttaagctca 369  Q
    ||||||||||| ||||||||||||||||||||||    
T  21941486 ttacgcattgtccctatcaactgagttaagctca 21941519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 3850305 - 3850249
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  3850305 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 3850249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 13496146 - 13496110
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggac 376  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  13496146 gcattgttcatatcaactgagttaagctcacgaggac 13496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 18593604 - 18593660
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  18593604 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 18593660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 19277604 - 19277568
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggac 376  Q
    |||||||||||||||||||||||||| |||| |||||    
T  19277604 gcattgttcctatcaactgagttaagttcacgaggac 19277568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 20480662 - 20480698
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggac 376  Q
    |||||||||||| |||||||||||||||||| |||||    
T  20480662 gcattgttcctaccaactgagttaagctcacgaggac 20480698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 20791626 - 20791570
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  20791626 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 20791570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 24162872 - 24162816
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||| ||| ||||| |||||||||||| |||||    
T  24162872 ttttttagttctaaagttatttttaagtaaaaagttgtttggcaaaatattatacaa 24162816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 32244457 - 32244401
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| || || ||||||  ||||||| ||||| ||||||||||||||||||    
T  32244457 ttttttagttctacagttatttttgagttaaaagttgtttggcaaaatattgtacaa 32244401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 3212999 - 3213281
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn---tgacctcttatgaagaagaaagt 108  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||||||| | |||||||                 |||||||||||||||||||||||    
T  3212999 atgaactcctcaagccataaaaatcagtcaactcaagtcatgcatggtctcaaaaccatgaaaaaaaaagaagaaaatgacctcttatgaagaagaaagt 3213098  T
Q  109 gaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaa 208  Q
    | |  |  ||| |||||||||||||||||||||||| ||||||       |||   | ||| |||||||||||||||||||||||||||   ||||  ||    
T  3213099 gtacaaa-gttcccaactgaacttagataccgtttgaccaaggtttttt-acggtctaaaagttacttcaaaacaaagttaaaataaaggtctttaagaa 3213196  T
Q  209 agaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  3213197 agaagataaagttgtttggtttctttgtttttttagttttaaagctattttaaagttaaatgttgtttgacaaaatattgtacaa 3213281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 18040955 - 18041235
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||| |||| |||||||||               ||||||| |||||||||||||||||    
T  18040955 atgaacccctcaagccataaaaatcagtcaactctagtcatgcatagtctcagaaccatgaaaaaaggaagaaaatgacctcatatgaagaagaaagtga 18041054  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || ||||||  || ||||||||| ||||||||||||||| |       | |   | ||| |||||||||||||||||||||||| || | ||||  ||||    
T  18041055 aacagtgttctcagctgaacttaaataccgtttggccaacgtttttttatggtctaaaagttacttcaaaacaaagttaaaatacaggcctttaagaaag 18041154  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||| | | |||| ||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||    
T  18041155 aagttaaagttgtttgtt-tctttg-ttttttagttttaaagctatttttaagttaaatgttgtttcgcaaaatattttacaa 18041235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 37462097 - 37461893
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  37462097 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 37461999  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  37461998 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 37461901  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  37461900 ttgtacaa 37461893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 298
Target Start/End: Original strand, 38042067 - 38042178
Alignment:
Q  187 ttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatat 286  Q
    ||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||| ||||||| |||||||    
T  38042067 ttaaaataaaggcctttacgaaagaagttaaagttgtttggtttatttgattttttaattttaaaactatttttaagttaaatgctgtgtggtaaaatat 38042166  T
Q  287 tgtacaagctgt 298  Q
    ||||||| ||||    
T  38042167 tgtacaaactgt 38042178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 9700137 - 9700019
Alignment:
Q  175 ttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    ||||||||||||||||||||||||| ||||  ||||||  |||||||||||||| | |||| ||| ||| ||||||||||||||| |||||||||||| |    
T  9700137 ttcaaaacaaagttaaaataaagacctttaagaaagaatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttct 9700038  T
Q  275 gtggcaaaatattgtacaa 293  Q
     || |||||||||||||||    
T  9700037 ttgccaaaatattgtacaa 9700019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 36514993 - 36515108
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtg 277  Q
    |||||||||||||||||||| | ||||  ||||||||||||| |||||||| |  ||  |||||||||||||||  ||||||||||||||| ||||| ||    
T  36514993 aaaacaaagttaaaataaagtcgtttaagaaagaagttaaagctgtttggttttgttatttttttagttttaaaattattttaaagttaaaagttgtttg 36515092  T
Q  278 gcaaaatattgtacaa 293  Q
    |||||||| |||||||    
T  36515093 gcaaaataatgtacaa 36515108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 43354819 - 43354534
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn---tgacctcttatgaagaagaaagt 108  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||                 |||| |||||||| ||||||| |    
T  43354819 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaacaatgaaaaaaaaataagaaaatgacatcttatgaggaagaaaat 43354720  T
Q  109 gaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaa 208  Q
    |||| |||||| |||||||||||||| ||| | ||||||||         |||   | ||| ||||||||||| ||| | ||||||||| | ||||  ||    
T  43354719 gaaacagtgttcccaactgaacttaggtacagcttggccaac-ctttttaacggtctaaaagttacttcaaaataaaataaaaataaaggcctttaagaa 43354621  T
Q  209 agaagttaaagttgtttggtgtatttgatttttta--gttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||| |||||||||||||| |||||| || ||||  ||||||| |||||||| |||||||| ||||| || |||||||||||||||    
T  43354620 agaagataaagttgtttggtttatttgtttatttatagttttaaggctatttttaagttaaaagttgtttgacaaaatattgtacaa 43354534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 293
Target Start/End: Complemental strand, 33929281 - 33929005
Alignment:
Q  13 tgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg--nnnnnnnnnnnnnntgacctcttatgaagaagaaagtga 110  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||                |||||||||||||||||||||||||    
T  33929281 tgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctaagaaccatgaaaaaaataaagaaaatgacctcttatgaagaagaaagtga 33929182  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || | |||| ||| ||||||||||||||      | |||         ||||  | ||| |||||| ||| |||||||||||| ||| | ||||  ||||    
T  33929181 aacattgttcccagctgaacttagatac------gacaaatgttttttacgatctaaaagttactttaaagcaaagttaaaatgaaggcctttaagaaag 33929088  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||  |||| ||||||| | | |||   |||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  33929087 aaactaaaattgtttgttttctttatgtttttagttttaaagctacttttaagttaaatgttgtttggaaaaatattgtacaa 33929005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 9700300 - 9700241
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  9700300 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 9700241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 19271042 - 19270927
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtg 277  Q
    ||||||||  || |||||||  |||||  ||||||| ||||| |||||||| | |||  ||||||||||||||||||||||| |||||||| ||||| ||    
T  19271042 aaaacaaatgtagaataaaggtatttaagaaagaagataaagctgtttggtttctttatttttttagttttaaagctatttttaagttaaaggttgtttg 19270943  T
Q  278 gcaaaatattgtacaa 293  Q
    |||||||||| |||||    
T  19270942 gcaaaatattatacaa 19270927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 18041283 - 18041346
Alignment:
Q  321 agacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||| |||||| |||||||||||||||| |||| ||||||||| |||||||||||||    
T  18041283 agacttggcatatatttatgcattgttcctatcaattgagctaagctcacgaggacaaaacttt 18041346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 2001627 - 2001511
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt-atttgattttttagttttaaagctattttaaagttaaatgttgtgt 276  Q
    |||||||||||||||||||| | ||||  ||| || ||||||||||||||| |  ||   |||||||||||||||| |||||| |||||||| ||||| |    
T  2001627 aaaacaaagttaaaataaagtcttttaagaaaaaaattaaagttgtttggtttcgttattttttttagttttaaagttatttttaagttaaaagttgttt 2001528  T
Q  277 ggcaaaatattgtacaa 293  Q
    || |||||| |||||||    
T  2001527 ggtaaaatactgtacaa 2001511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 14205558 - 14205435
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| |||||||||||||||||| | ||  |  |||||||||| ||||| |||||| || |||||     
T  14205558 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttgtttggtttctttatttttttttagttctaaagttatttttaatttaaaa 14205459  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| |||||||||||| |||||    
T  14205458 gttgtttggcaaaatattatacaa 14205435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 15875676 - 15875801
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt----agttttaaagctattttaaagttaa 267  Q
    ||||| ||||||||||||||||||||   ||||  ||||||| |||||||||||||| | |||  ||||||    | |||||||| |||||| |||||||    
T  15875676 tactttaaaacaaagttaaaataaaggtctttaagaaagaagctaaagttgtttggtttctttttttttttttttaattttaaagttatttttaagttaa 15875775  T
Q  268 atgttgtgtggcaaaatattgtacaa 293  Q
    | ||||| | ||||||||||||||||    
T  15875776 aagttgtttagcaaaatattgtacaa 15875801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 37462263 - 37462215
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  37462263 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 37462215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 383
Target Start/End: Complemental strand, 9699958 - 9699915
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaactt 383  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  9699958 gcattgttcctatcaactgagttaagctcacgaggacaaaactt 9699915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 20259194 - 20259073
Alignment:
Q  173 acttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat--tttttagttttaaagctattttaaagttaaatg 270  Q
    ||||||||||||||||||||| |||   ||||  |||||||||||||||||||| | || || ||  |||||||||||| | ||||||| ||||||||      
T  20259194 acttcaaaacaaagttaaaattaagggttttatgaaagaagttaaagttgtttgat-tactttattatttttagttttacaactatttttaagttaaaaa 20259096  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| || |||||||||||||||    
T  20259095 ttgtttgacaaaatattgtacaa 20259073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 2530231 - 2530107
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt---agttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||   || |||||||| ||||||||| | |||  ||||||   |||| ||||| |||||| ||||||||    
T  2530231 tactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaaattgtttggtttctttatttttttttcagttctaaagttatttttaagttaaa 2530132  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  2530131 agttgtttggcaaaatattgtacaa 2530107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 37461845 - 37461783
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||| |||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  37461845 gacttgacatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 37461783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 39803826 - 39803903
Alignment:
Q  215 taaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||| |||||||| | ||| ||||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  39803826 taaagctgtttggtttcttt-attttttagttctaaagttatttttaagttaaacgttgtttggcaaaatattgtacaa 39803903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 19361728 - 19361672
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  19361728 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 19361672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 37147145 - 37147089
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  37147145 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 37147089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 42416945 - 42416822
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| |||||||||||||||||||| | ||||  ||| |||||||||||||||||| | ||  |  ||||||  || ||||| |||||| ||||||||     
T  42416945 tactttaaaacaaagttaaaataaagccctttaagaaaaaagttaaagttgtttggtttctttattttttttttattctaaagttatttttaagttaaaa 42416846  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| |  |||||||||||||||    
T  42416845 gttgtttcacaaaatattgtacaa 42416822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 7536791 - 7536667
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||   || ||| |||||||||||||| | |   ||  |||||||||| ||||| |||||| ||||||||    
T  7536791 tactttaaaacaaagttaaaataaagttctttaaggaaaaagctaaagttgtttggtttctttattttttttttagttctaaagttatttttaagttaaa 7536692  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| | ||||||||||||||||    
T  7536691 agttgtttagcaaaatattgtacaa 7536667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 25821367 - 25821245
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| | | |||||||||||||| | |||   |||||||||| ||||| ||||||  ||||||| |    
T  25821367 tactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttgtttggtttctttattttttttagttctaaagttatttttgagttaaaag 25821268  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| ||||||||||||||||||    
T  25821267 ctgtttggcaaaatattgtacaa 25821245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 29382544 - 29382626
Alignment:
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||  |||||||| | |||  |||||||||| ||||| |||||| |||||||| ||||| ||||||||||| ||||||    
T  29382544 aagttaaaactgtttggtttctttagttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatatagtacaa 29382626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 30503458 - 30503582
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt---agttttaaagctattttaaagttaaa 268  Q
    ||||| |||||||||||||||||||    ||||  ||| |||||||||||||||||| | ||| |||||||   |||| ||||| |||||| ||||||||    
T  30503458 tactttaaaacaaagttaaaataaaactctttaagaaaaaagttaaagttgtttggtttctttaatttttttttagttctaaagttatttttaagttaaa 30503557  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
      || | | ||||||||||||||||    
T  30503558 aattatttagcaaaatattgtacaa 30503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 30543801 - 30543925
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt---agttttaaagctattttaaagttaaa 268  Q
    ||||| |||||||||||||||||||    ||||  ||| |||||||||||||||||| | ||| |||||||   |||| ||||| |||||| ||||||||    
T  30543801 tactttaaaacaaagttaaaataaaactctttaagaaaaaagttaaagttgtttggtttctttaatttttttttagttctaaagttatttttaagttaaa 30543900  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
      || | | ||||||||||||||||    
T  30543901 aattatttagcaaaatattgtacaa 30543925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 39783104 - 39782983
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttg--attttttagtttt-aaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||   || ||||||||| |||||||| | |||   ||||||||||||| |||| ||||||  |||||||    
T  39783104 tactttaaaacaaagttaaaataaagttctttaaggaataagttaaagctgtttggtttctttattattttttagttttgaaagttatttttcagttaaa 39783005  T
Q  269 tgttgtgtggcaaaatattgta 290  Q
     ||||| |||||||||||||||    
T  39783004 agttgtttggcaaaatattgta 39782983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 788952 - 789076
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaa 268  Q
    |||||| |||||||| |||||||||||   ||||   || || ||||||||||||||| | |||  ||||||  |||| ||||  |||||| ||||||||    
T  788952 ttactttaaaacaaacttaaaataaagctctttaaggaaaaaattaaagttgtttggtttctttatttttttttagttctaaaattatttttaagttaaa 789051  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  789052 agttgtttggcaaaatattgtacaa 789076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 13351503 - 13351442
Alignment:
Q  323 acttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||| ||| || ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  13351503 acttggcatatatatatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 13351442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 28746312 - 28746365
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgta 290  Q
    |||||||||| ||||| |||||| |||||||| ||||| |||||||||||||||    
T  28746312 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgta 28746365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 3246907 - 3246851
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||| | ||||| ||||||||||||||||||    
T  3246907 ttttttagttctaaagttatttttaagttacaagttgtttggcaaaatattgtacaa 3246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 28887140 - 28887096
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||    
T  28887140 gcattgttcctatcaactgagttaaactcacgaagacaaaacttt 28887096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 42110766 - 42110710
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| | ||| ||||||||||||||||||    
T  42110766 ttttttagttctaaagttatttttaagttaaaagctgtttggcaaaatattgtacaa 42110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 42111803 - 42111859
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||| | |||||||| ||||| ||||||||||||||||||    
T  42111803 ttttttagttataaagttattgttaagttaaaagttgtttggcaaaatattgtacaa 42111859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 333 - 376
Target Start/End: Original strand, 7336339 - 7336382
Alignment:
Q  333 tatttacgcattgttcctatcaactgagttaagctcacaaggac 376  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||    
T  7336339 tatttatgcattgttcctatcaactgagctaagctcacgaggac 7336382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 789989 - 790111
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||||||||  | |||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  789989 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaaactatttggtttctttattttttttagttctaaagttatttttaagttaaaag 790088  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||  ||||||||||||||    
T  790089 ttgtttgaaaaaatattgtacaa 790111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 28887325 - 28887272
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtt 224  Q
    |||||| |||||||||||||||||||| ||||||  ||||||| | ||||||||    
T  28887325 ttactttaaaacaaagttaaaataaaggcatttaagaaagaagcttaagttgtt 28887272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 31958377 - 31958434
Alignment:
Q  237 ttttttagtttt-aaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||| |||| |||||| |||||||| ||||| || |||||||||||||||    
T  31958377 ttttttagttttgaaagttatttttaagttaaaagttgtttgacaaaatattgtacaa 31958434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 43396595 - 43396542
Alignment:
Q  240 tttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| ||||| |||||| |||||| | ||||| ||||||||||||||||||    
T  43396595 tttagttctaaagttatttttaagttagaagttgtttggcaaaatattgtacaa 43396542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 1060782 - 1060726
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||||||| || |||||| ||||||||  |||| || |||||||||||||||    
T  1060782 ttttttagttttagagttatttttaagttaaaaattgtttgacaaaatattgtacaa 1060726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 2475268 - 2475324
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  2475268 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 2475324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 4374851 - 4374907
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| ||||| |||||| |||||||||||    
T  4374851 ttttttagttctaaagttatttttgagttaaaagttgtttggcaagatattgtacaa 4374907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 6928354 - 6928410
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  6928354 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 6928410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 11720924 - 11720888
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggac 376  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  11720924 gcattgtccctaccaactgagttaagctcacaaggac 11720888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 16050768 - 16050824
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  16050768 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 16050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 24027787 - 24027910
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||| | ||||| ||||||  |||||||     
T  24027787 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttatttttttttagctctaaagttatttttgagttaaaa 24027886  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  24027887 gctgtttggcaaaatattgtacaa 24027910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 30503686 - 30503800
Alignment:
Q  173 acttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaat 269  Q
    |||| ||||||||||||||||||||   ||||  ||| ||||||||| || ||||| | |   ||  |||||||||| ||||| |||||| ||||||||     
T  30503686 actttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagctgattggtttctttattttttttttagttctaaagttatttttaagttaaaa 30503785  T
Q  270 gttgtgtggcaaaat 284  Q
    ||||| |||||||||    
T  30503786 gttgtttggcaaaat 30503800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 30544029 - 30544143
Alignment:
Q  173 acttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaat 269  Q
    |||| ||||||||||||||||||||   ||||  ||| ||||||||| || ||||| | |   ||  |||||||||| ||||| |||||| ||||||||     
T  30544029 actttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagctgattggtttctttattttttttttagttctaaagttatttttaagttaaaa 30544128  T
Q  270 gttgtgtggcaaaat 284  Q
    ||||| |||||||||    
T  30544129 gttgtttggcaaaat 30544143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 31884659 - 31884715
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  31884659 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 31884715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 35380499 - 35380555
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| || ||| |||||||| ||||| |||||||||||| |||||    
T  35380499 ttttttagttctaaagttaattttaagttaaaagttgtttggcaaaatattatacaa 35380555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 36083872 - 36083816
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| ||| |||| | ||| ||||||||||||||||||    
T  36083872 ttttttagttctaaagttatttttaagctaaaagctgtttggcaaaatattgtacaa 36083816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 99684 - 99404
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnntgacctcttatgaagaagaaagtgaa 111  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||||              |||||||||||||||||||| |||||    
T  99684 atgaacccctcaagccataaaaatcattcaactcaagtcatgcatggtctcagaaccatgaaaaaggaagaaaatgacctcttatgaagaagaatgtgaa 99585  T
Q  112 atagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaaga 211  Q
    | |||||| ||| |||||||||||||||||||| | ||||       |||   | ||| ||| |||||||||||||||||||||||   ||||  || ||    
T  99584 acagtgttcccagctgaacttagataccgtttgacaaaggtttttt-acggtctaaaagttatttcaaaacaaagttaaaataaaggtctttaagaatga 99486  T
Q  212 agttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    || |||||||||||| | | |||| ||||||||||||||||||| ||| ||||||||| |||| || |||||||||||||||    
T  99485 agctaaagttgtttgttttctttgtttttttagttttaaagctacttttaagttaaatattgtttgacaaaatattgtacaa 99404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 99371 - 99299
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||  |||||| ||| |||||| | ||||||||||||| ||||| ||| ||||| |||||||||||||    
T  99371 tcgaaccccggacttgacatatatttatgaattgttcctatcatctgagctaaactcacgaggacaaaacttt 99299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 1692567 - 1692682
Alignment:
Q  187 ttaaaataaagacatttacaaaagaagttaaagttgtt-tggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    ||||||||||| | ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1692567 ttaaaataaaggcttttacgaaagaagttaaagttgttgtggtttatttgattttttagttttaaagctatttttaagttaaatgttgtgtggcaaaata 1692666  T
Q  286 ttgtacaagctgtgaa 301  Q
    |||||||| |||||||    
T  1692667 ttgtacaaactgtgaa 1692682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 3708679 - 3708475
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  3708679 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 3708581  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  3708580 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 3708483  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  3708482 ttgtacaa 3708475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 11868737 - 11868941
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||       ||    | ||| |||||||||||||||    
T  11868737 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggtttttt-acattataaaagttacttcaaaacaaa 11868835  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  11868836 gtaaaaataaaggcctttatgaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 11868933  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  11868934 ttgtacaa 11868941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 35360130 - 35360334
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||       ||    | ||| |||||||||||||||    
T  35360130 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggtttttt-acattataaaagttacttcaaaacaaa 35360228  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  35360229 gtaaaaataaaggcctttatgaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 35360326  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  35360327 ttgtacaa 35360334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 293
Target Start/End: Original strand, 35287081 - 35287356
Alignment:
Q  13 tgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtgaa 111  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||||||| |||||||||               ||||||||||||||||||||||||||    
T  35287081 tgaacccctcaaaccataaaaatcagtcaactcaagtcatgcatggtctaagaaccatgaaaaaataaagaaaatgacctcttatgaagaagaaagtgaa 35287180  T
Q  112 atagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaaga 211  Q
    | | |||| ||| ||||||||||||||     ||| || |       ||||  | ||| |||||| |||||||||||||||||||| | ||||  |||||    
T  35287181 acattgttcccagctgaacttagatac-----ggcaaatgtttttt-acgatctaaaagttactttaaaacaaagttaaaataaaggcctttaagaaaga 35287274  T
Q  212 agttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |  |||||||||||| | | |||  ||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  35287275 aactaaagttgtttgttttctttatttttttagttttaaagctacttttaagttaaatgttgtttggaaaaatattgtacaa 35287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 1692713 - 1692785
Alignment:
Q  312 tcgaaccctagacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  1692713 tcgaacccttgacttggcatgtatttatgcattgttcatatcaattgagttaagctcacaaggacaaaacttt 1692785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 17032740 - 17032863
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttt--ttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| |||||||||||||||||| | ||| |||||  |||||||||||| |||||| ||||||||     
T  17032740 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttgtttggtttctttaattttttttagttttaaagttatttttaagttaaaa 17032839  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    ||||| ||||||||||||||||||    
T  17032840 gttgtttggcaaaatattgtacaa 17032863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 3708427 - 3708365
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  3708427 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 3708365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 11868989 - 11869051
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  11868989 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 11869051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 34912798 - 34912676
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||   || |||||||||||||||||| | |||  |||||| | || ||||| |||||| |||||||| |    
T  34912798 tactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagttgtttggtttctttattttttttaattctaaagttatttttaagttaaaag 34912699  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  34912698 ttgtttggcaaaatattgtacaa 34912676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 35360382 - 35360444
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  35360382 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 35360444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 40202362 - 40202240
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttt-tagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||   || |||||||||||||||||| | |||  ||||| ||||| ||||| |||||| |||||||| |    
T  40202362 tactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagttgtttggtttctttattttttctagttctaaagttatttttaagttaaaag 40202263  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    ||||  |||||||||||||||||    
T  40202262 ttgttaggcaaaatattgtacaa 40202240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 41452962 - 41452840
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttt-tagttttaaagctattttaaagttaaatg 270  Q
    ||||| |||||||||||||||||||    ||||   || |||||||||||||||||| | |||  ||||| ||||| ||||| |||||| |||||||| |    
T  41452962 tactttaaaacaaagttaaaataaaactctttaaggaaaaagttaaagttgtttggtttctttattttttctagttctaaagttatttttaagttaaaag 41452863  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  41452862 ttgtttggcaaaatattgtacaa 41452840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 3708845 - 3708797
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3708845 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 3708797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 11868571 - 11868619
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  11868571 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 11868619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 35359964 - 35360012
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  35359964 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 35360012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 3243289 - 3243345
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  3243289 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 3243345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 45474871 - 45474747
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttaca-aaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaa 268  Q
    |||||| |||| |||||||||||||||   ||||   ||| ||||||||| |||||||| |||||  |||||| |||| ||||  |||||| ||||||||    
T  45474871 ttactttaaaataaagttaaaataaagctctttaaggaaaaaagttaaagctgtttggtttatttattttttttagttctaaatttatttttaagttaaa 45474772  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  45474771 agttgtttggcaaaatattgtacaa 45474747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 38879244 - 38879161
Alignment:
Q  211 aagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||||| | |||  |||||| |||| ||||| |||||| |||||||| ||||| |||||||||||| |||||    
T  38879244 aagttaaagttgtttggtttctttattttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattttacaa 38879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 1835832 - 1835710
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttgg-tgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| | | ||||||||||||| | | |||  |||||||||| ||||| ||||||  ||||||| |    
T  1835832 tactttaaaacaaagttaaaataaagctctttaagaaaaaggctaaagttgtttggttttttttttttttttagttctaaagttatttttgagttaaaag 1835733  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| ||||||||||||||||||    
T  1835732 ctgtttggcaaaatattgtacaa 1835710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 36078488 - 36078606
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgt 271  Q
    ||||| ||||||||||||||||||||   |||| |||| ||| ||||| |||||| | | |||  |||||||||| ||||| |||||| |||||||| |     
T  36078488 tactttaaaacaaagttaaaataaagctctttaaaaaa-aagctaaagctgtttgatttcttt--ttttttagttctaaagttatttttaagttaaaagg 36078584  T
Q  272 tgtgtggcaaaatattgtacaa 293  Q
    ||| || |||||||||||||||    
T  36078585 tgtttgacaaaatattgtacaa 36078606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 36085873 - 36085997
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttg---attttttagttttaaagctattttaaagttaaa 268  Q
    ||||| |||||||||||||||||||||  ||||  ||| | | ||||| |||||||| | |||    ||||||||||| ||||| ||||||  |||||||    
T  36085873 tactttaaaacaaagttaaaataaagatctttaagaaaaaggctaaagctgtttggtttctttatttattttttagttctaaagttatttttgagttaaa 36085972  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  36085973 agctgtttggcaaaatattgtacaa 36085997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 10120691 - 10120634
Alignment:
Q  236 attttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||||| ||||| |||||| |||||||| ||||| || |||||||||||||||    
T  10120691 attttttagttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaa 10120634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 17051076 - 17051188
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgt 271  Q
    ||||| ||||||||||||||||||||   ||||  ||| |||||||||||||||||| | ||| |||||    |||||      |||||||||||| |||    
T  17051076 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaagttgtttggtttctttaatttt----tttta-----gttttaaagttaattgt 17051166  T
Q  272 tgtgtggcaaaatattgtacaa 293  Q
    ||| ||||||||||||||||||    
T  17051167 tgtttggcaaaatattgtacaa 17051188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 31972430 - 31972307
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| ||||||  |||||||     
T  31972430 tactttaaaacaaagttaaaataaagctctttaagaaaaatgttaaagctgtttggtttctttatttttttttagttctaaagttatttttgagttaaaa 31972331  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  31972330 gctgtttggcaaaatattgtacaa 31972307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 1118061 - 1118006
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtaca 292  Q
    |||||||||| ||||| |||||| |||||||| ||||| || ||||||||||||||    
T  1118061 ttttttagttctaaagttatttttaagttaaaagttgtttgacaaaatattgtaca 1118006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 18166760 - 18166883
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaat 269  Q
    |||||| ||||||||||||||||||||   |||| |||| | | ||||| ||||| || | |||   |||||||||| ||||| ||||||  |||||||     
T  18166760 ttactttaaaacaaagttaaaataaagttctttaaaaaaaaggctaaagctgtttcgtttctttattttttttagttctaaagttatttttgagttaaaa 18166859  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  18166860 gctgtttggcaaaatattgtacaa 18166883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 668218 - 668344
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-----agttttaaagctattttaaagtta 266  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||| |||||||||||||| | |||  ||||||     |||| ||||| |||||| || |||    
T  668218 tactttaaaacaaagttaaaataaagttctttaagaaaaaagctaaagttgtttggtttctttattttttttttttagttctaaagttatttttaaatta 668317  T
Q  267 aatgttgtgtggcaaaatattgtacaa 293  Q
    || ||||| ||||||||||||| ||||    
T  668318 aaagttgtttggcaaaatattgcacaa 668344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 971102 - 970978
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | |   ||  |||||||||| ||||| ||||||  |||||||    
T  971102 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagttatttttgagttaaa 971003  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  971002 agctgtttggcaaaatattgtacaa 970978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 8878268 - 8878144
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | |   ||  |||||||||| ||||| ||||||  |||||||    
T  8878268 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagttatttttgagttaaa 8878169  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  8878168 agctgtttggcaaaatattgtacaa 8878144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 28644555 - 28644518
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggaca 377  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  28644555 gcattgtccctaccaactgagttaagctcacaaggaca 28644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 32292334 - 32292281
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtt 224  Q
    |||||| |||||||||||||||||||| |||||| | || ||||||||| ||||    
T  32292334 ttactttaaaacaaagttaaaataaagccatttaaagaaaaagttaaagctgtt 32292281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 3079798 - 3079742
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||  |||||| |||||||| ||||| ||||||||||||| ||||    
T  3079798 ttttttagttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaa 3079742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 5166347 - 5166291
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  5166347 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 5166291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 7274751 - 7274695
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  7274751 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 7274695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 24926079 - 24926135
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  24926079 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 24926135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 38709776 - 38709720
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| || ||||| |||||| |||||||| ||||| || |||||||||||||||    
T  38709776 ttttttaattataaagttatttttaagttaaaagttgtttgacaaaatattgtacaa 38709720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 41986126 - 41986332
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||||       |||   | ||| |||||| |||| |||    
T  41986126 tgacctcttatgaagaagaaagtgaaacagtgttcccagctgaacttagataccgtttgaccaaggtttttt-acggtctaaaagttacttgaaaataaa 41986224  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    |||||||||||| | ||||  ||||||| ||||||| |||||| | |||| ||||||||||||||||||| ||| |||||||| ||||| || |||||||    
T  41986225 gttaaaataaaggcctttaagaaagaagctaaagttatttggtttctttgtttttttagttttaaagctaattttaagttaaacgttgtttgacaaaata 41986324  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  41986325 ttgtacaa 41986332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 24079915 - 24080119
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  24079915 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 24080013  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  24080014 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 24080111  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  24080112 ttgtacaa 24080119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 43330132 - 43329928
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  43330132 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 43330034  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  43330033 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 43329936  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  43329935 ttgtacaa 43329928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 10261844 - 10262048
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||       ||    | ||| |||||||||||||||    
T  10261844 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggtttttt-acattataaaagttacttcaaaacaaa 10261942  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  10261943 gtaaaaataaaggcctttatgaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 10262040  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  10262041 ttgtacaa 10262048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 21562611 - 21562407
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||       ||    | ||| |||||||||||||||    
T  21562611 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggtttttt-acattataaaagttacttcaaaacaaa 21562513  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  21562512 gtaaaaataaaggcctttatgaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 21562415  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  21562414 ttgtacaa 21562407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 26926785 - 26926989
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  26926785 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 26926883  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || ||||||||| | ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| || |||||||    
T  26926884 gtaaaaataaaggcctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttgacaaaata 26926981  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  26926982 ttgtacaa 26926989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 51450198 - 51449994
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||         | ||  ||| |||||||||||||||    
T  51450198 tgacctcttatgaagaagaaagtgaaacagtgttcccgactgaacttagataccgtttggtcaaggttttttacagtcta-aaagttacttcaaaacaaa 51450100  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaata 285  Q
    || |||||||||   ||||  ||||||  ||||||| |||||| | |||| ||| ||||||||||||||||||  ||||| |||||||| ||||||||||    
T  51450099 gtaaaaataaaggtctttaagaaagaaactaaagttatttggtttttttgttttgttagttttaaagctattt--aagtttaatgttgtttggcaaaata 51450002  T
Q  286 ttgtacaa 293  Q
    ||||||||    
T  51450001 ttgtacaa 51449994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 9097398 - 9097520
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||||||||||||||||||||||||| | ||||  |||||||  ||||||||||||| | |||| ||| |||||||| |||||||||| ||||||||||    
T  9097398 ttacttcaaaacaaagttaaaataaaggcctttaagaaagaagcaaaagttgtttggtttttttgttttcttagttttcaagctatttttaagttaaatg 9097497  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  9097498 ttgtttggcaaaatattgtacaa 9097520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 86 - 274
Target Start/End: Complemental strand, 19588139 - 19587953
Alignment:
Q  86 tgacctcttatgaagaagaaagtgaaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaa 185  Q
    ||||| ||||||||||||||||| ||| ||||||  | |||||||||||| ||||||||| ||| |       |||   | ||| ||||||||| |||||    
T  19588139 tgaccacttatgaagaagaaagtaaaacagtgttcgcgactgaacttagacaccgtttggtcaaagggtttttacggtctaaaagttacttcaagacaaa 19588040  T
Q  186 gttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    |||||||||||| | ||||  ||||||| |||||||||||||| | |||  ||||||||||||||||||||||  ||||||||||||||    
T  19588039 gttaaaataaaggcttttaagaaagaagctaaagttgtttggtttctttatttttttagttttaaagctattt--aagttaaatgttgt 19587953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 26871539 - 26871657
Alignment:
Q  175 ttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    ||||||||||||||||||||||| | ||||  ||||||  |||||||||||||| | |||| ||| ||| ||||||||||||||| ||||||||||||||    
T  26871539 ttcaaaacaaagttaaaataaaggcctttaagaaagaatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgt 26871638  T
Q  275 gtggcaaaatattgtacaa 293  Q
     ||  ||||||||||||||    
T  26871639 ttgcaaaaatattgtacaa 26871657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 29345993 - 29346277
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn--tgacctcttatgaagaagaaagtg 109  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||                |||| |||||||| ||||||||||    
T  29345993 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaacaatgaaaaaaaagaagaaaatgacatcttatgaggaagaaagtg 29346092  T
Q  110 aaatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaa 209  Q
    ||| |||||| |||||||||||||| |||  |||||||||           | ||  ||| ||||||||||| ||| ||||||||||| | || |  |||    
T  29346093 aaacagtgttcccaactgaacttaggtacaatttggccaaactttttagcggtcta-aaagttacttcaaaataaaattaaaataaaggccttcaagaaa 29346191  T
Q  210 gaagttaaagttgtttggtgtatttgatttttta--gttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||||||||||||| | |||| || ||||  ||||||| |||||||| |||||||| ||||| || |||||||||||||||    
T  29346192 gaagttaaagttgtttggtttctttgtttatttatagttttaaggctatttttaagttaaaagttgtttgacaaaatattgtacaa 29346277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 26927037 - 26927099
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  26927037 gacttggcatgtatttacgcattgttcctatcaactgagttaaactcatgaggacaaaacttt 26927099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 9097229 - 9097288
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  9097229 atgaacccctcaaaccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 9097288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 26871376 - 26871435
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  26871376 atgaacccctcaagccataaaaaacagtcaactcaagtcatgcatggtctcagaaccatg 26871435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 10262096 - 10262158
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  10262096 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 10262158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 21562359 - 21562297
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  21562359 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 21562297  T

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Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 24080167 - 24080229
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  24080167 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 24080229  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 43117663 - 43117541
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttt-agttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||   || |||||||||||||||||| | |||  |||||| |||| ||||| | |||| |||||||| |    
T  43117663 tacttaaaaacaaagttaaaataaagctttttaagtaaaaagttaaagttgtttggtttctttattttttttagttctaaagttgtttttaagttaaaag 43117564  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||||||||||||||||    
T  43117563 ttgtttggcaaaatattgtacaa 43117541  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 43329880 - 43329818
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  43329880 gacttggcatgtatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 43329818  T

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Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 24631040 - 24631149
Alignment:
Q  182 caaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatgttgtgtggca 280  Q
    ||||||||||||||||   ||||  ||||||||||||||||||| || | |||   ||||||||||||||| ||||||| |||||||| ||||| ||| |    
T  24631040 caaagttaaaataaaggtttttaagaaagaagttaaagttgtttagtttctttattttttttagttttaaaactatttttaagttaaaagttgtttggaa 24631139  T
Q  281 aaatattgta 290  Q
    ||||||||||    
T  24631140 aaatattgta 24631149  T

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Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 10261678 - 10261726
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  10261678 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 10261726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 21562777 - 21562729
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  21562777 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 21562729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 24079750 - 24079798
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  24079750 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 24079798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 26097645 - 26097701
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  26097645 ttttttagttttaaagttattttgaagttaaaagttgtttggcaaaatattgtacaa 26097701  T

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Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 26871717 - 26871761
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  26871717 gcattgttcctatcaactgagttaagctcacgaggacaaaacttt 26871761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 26926617 - 26926665
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  26926617 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 26926665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 35831756 - 35831896
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg---nnnnnnnnnnnnnntgacctcttatgaagaagaaagt 108  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||| ||||| |||                 |||| |||||||| |||||||||    
T  35831756 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatagtctcagaacaatgagaaaaaaagaagaaaatgacatcttatgaggaagaaagt 35831855  T
Q  109 gaaatagtgtttccaactgaacttagataccgtttggccaa 149  Q
    |||| |||||| |||||||||||||| ||| ||||||||||    
T  35831856 gaaacagtgttcccaactgaacttaggtacagtttggccaa 35831896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 43330298 - 43330250
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  43330298 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 43330250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 51450366 - 51450318
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  51450366 aagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatg 51450318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 32200651 - 32200766
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtg 277  Q
    ||||||||||||||||||||   ||||   |||||  |||||||||||||| | | |  |||||||||||||||| |||||| || ||||| ||||| ||    
T  32200651 aaaacaaagttaaaataaagctctttaaggaagaaactaaagttgtttggtttttattgttttttagttttaaagttatttttaaattaaaagttgtttg 32200750  T
Q  278 gcaaaatattgtacaa 293  Q
    ||| ||||||||||||    
T  32200751 gcagaatattgtacaa 32200766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 8848085 - 8847961
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||   || ||||||||| |||||||| | |   ||  |||||||||| ||||| |||||| ||||||||    
T  8848085 tactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagctgtttggtttctttattttttttttagttctaaagttatttttaagttaaa 8847986  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     ||||| ||||||||||||||||||    
T  8847985 agttgtttggcaaaatattgtacaa 8847961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 51449946 - 51449884
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||| | ||||||||||||||||||| ||| ||||  |||||||||||||    
T  51449946 gacttggcatgtatttatgtattgttcctatcaactgagctaaactcatgaggacaaaacttt 51449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 293
Target Start/End: Original strand, 35831913 - 35832041
Alignment:
Q  167 aaacttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgatttttta--gttttaaagctattttaaagt 264  Q
    ||| |||||| |||| ||| ||||| ||||| | ||||   ||||||||||| ||||||||| | |||| || ||||  ||||||| |||||||| ||||    
T  35831913 aaagttacttaaaaataaaattaaactaaaggcctttaaggaagaagttaaaattgtttggtttctttgtttatttatagttttaaggctatttttaagt 35832012  T
Q  265 taaatgttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||| || |||||||||||||||    
T  35832013 taaaagttgtttgacaaaatattgtacaa 35832041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 7365942 - 7365819
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatt--tgattttttagttttaaagctattttaaagttaaat 269  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | ||  |  |||||||||| ||||| |||||| ||||||||     
T  7365942 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttatttttttttagttctaaagttatttttaagttaaaa 7365843  T
Q  270 gttgtgtggcaaaatattgtacaa 293  Q
    | ||| ||||||||||||||||||    
T  7365842 gctgtttggcaaaatattgtacaa 7365819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 11180987 - 11180931
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  11180987 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 11180931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 19588307 - 19588259
Alignment:
Q  23 aagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  19588307 aagccataaaaatcagtcaactcaagtcatgtatggtctcagaaccatg 19588259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 23628914 - 23628858
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  23628914 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 23628858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 46045789 - 46045845
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  46045789 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 46045845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 289
Target Start/End: Complemental strand, 44856723 - 44856613
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtg 277  Q
    |||||||||||||||||||| | |||| |||| ||||||||| |||||||| |  ||  |||| ||||||||||   ||||| |||||||| ||||| ||    
T  44856723 aaaacaaagttaaaataaagcccttta-aaaaaaagttaaagatgtttggtttcattatttttctagttttaaaatgatttttaagttaaaagttgtttg 44856625  T
Q  278 gcaaaatattgt 289  Q
    | ||||||||||    
T  44856624 gtaaaatattgt 44856613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 1166784 - 1166662
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||||||||  |||||||| | |||   |||||||||| ||||| ||||||  ||||||| |    
T  1166784 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaaactgtttggtttctttattttttttagttctaaagttatttttgagttaaaag 1166685  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| ||||||||||||||||||    
T  1166684 ctgtttggcaaaatattgtacaa 1166662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 1169266 - 1169144
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||||||||  |||||||| | |||   |||||||||| ||||| ||||||  ||||||| |    
T  1169266 tactttaaaacaaagttaaaataaagctctttaagaaaaaagttaaaactgtttggtttctttattttttttagttctaaagttatttttgagttaaaag 1169167  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
     ||| ||||||||||||||||||    
T  1169166 ctgtttggcaaaatattgtacaa 1169144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 11200980 - 11200856
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | |   ||  |||||||||| ||||| |||||| ||||||||    
T  11200980 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagttatttttaagttaaa 11200881  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  11200880 agctgtttggcaaaatattgtacaa 11200856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 19587887 - 19587825
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||| ||| |||||| ||||||||||||||||||||| ||| ||||  |||||||||||||    
T  19587887 gacttgacatatatttatgcattgttcctatcaactgagctaaactcatgaggacaaaacttt 19587825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 20681274 - 20681220
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtac 291  Q
    |||||||||||||||| |||||| |||||||| ||||| ||| ||||||||||||    
T  20681274 ttttttagttttaaagttatttttaagttaaaagttgtttggtaaaatattgtac 20681220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 24303731 - 24303853
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| |||| ||||||||||||||| ||||||   || ||| ||||| | |||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  24303731 tactttaaaataaagttaaaataaagccatttaaggaaaaagctaaagctatttggtttctttattttttttagttctaaagttatttttaagttaaaag 24303830  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    || | ||||||||||||||||||    
T  24303831 ttatttggcaaaatattgtacaa 24303853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 32139485 - 32139431
Alignment:
Q  239 ttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||  |||||| |||||||| ||||| ||||||||||||||||||    
T  32139485 ttttagttttaaaattatttttaagttaaaagttgtttggcaaaatattgtacaa 32139431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 39651877 - 39651758
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgt 271  Q
    ||||| ||||||||||||||||||||   ||||   || ||||||||| |||||||| | |||   |||||||  |||||| |||||| |||||||| ||    
T  39651877 tactttaaaacaaagttaaaataaagctctttaaggaaaaagttaaagctgtttggtttcttt--atttttagagttaaagttatttttaagttaaaagt 39651780  T
Q  272 tgtgtggcaaaatattgtacaa 293  Q
    ||| ||||||||| ||||||||    
T  39651779 tgtttggcaaaatgttgtacaa 39651758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 40952165 - 40952043
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||| |||| |||||||||||||||   ||||   || ||||| |||||||||||| | |||   |||||||||| ||||| |||||| |||||||| |    
T  40952165 tactttaaaataaagttaaaataaagttttttaaggaaaaagtttaagttgtttggtttctttattttttttagttctaaagttatttttaagttaaaag 40952066  T
Q  271 ttgtgtggcaaaatattgtacaa 293  Q
    |||| || |||||||||||||||    
T  40952065 ttgtttgacaaaatattgtacaa 40952043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 30071480 - 30071364
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtattt-gattttttagttttaaagctattttaaagttaaatgttgtgt 276  Q
    |||||||||||||||||||||  ||||  ||||||||||||| | |||| | | |||   |||||||||| ||||| |||||| || || || ||||| |    
T  30071480 aaaacaaagttaaaataaagatctttaagaaagaagttaaagctatttgatttctttattttttttagttataaagttatttttaactttaaagttgttt 30071381  T
Q  277 ggcaaaatattgtacaa 293  Q
    |||||||||| ||||||    
T  30071380 ggcaaaatatcgtacaa 30071364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 37873640 - 37873696
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| || ||||| ||||| ||||||||||||||||||    
T  37873640 ttttttagttctaaagttatttttaaattaaaagttgtttggcaaaatattgtacaa 37873696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 41144299 - 41144355
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| |||||||||||| |||||    
T  41144299 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattatacaa 41144355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 51153563 - 51153507
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||| || ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  51153563 ttttttaattctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 51153507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 377
Target Start/End: Complemental strand, 39489634 - 39489599
Alignment:
Q  342 attgttcctatcaactgagttaagctcacaaggaca 377  Q
    |||||||||||||||||| |||||||||||||||||    
T  39489634 attgttcctatcaactgaattaagctcacaaggaca 39489599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 41986389 - 41986440
Alignment:
Q  333 tatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||| ||||||||||||||| ||||| ||| ||||| |||||||||||||    
T  41986389 tatttatgcattgttcctatcatctgagctaaactcacgaggacaaaacttt 41986440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 379
Target Start/End: Complemental strand, 44724413 - 44724374
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaa 379  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  44724413 gcattgttcataccaactgagttaagctcacaaggacaaa 44724374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 290
Target Start/End: Original strand, 29099618 - 29099672
Alignment:
Q  236 attttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgta 290  Q
    ||||||||||| ||||| ||||||  ||||||| ||||| |||||||||||||||    
T  29099618 attttttagttgtaaagttatttttcagttaaaagttgtttggcaaaatattgta 29099672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 384
Target Start/End: Original strand, 41144433 - 41144467
Alignment:
Q  350 tatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||| |||||||||||||    
T  41144433 tatcaactgagttaagctcacgaggacaaaacttt 41144467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 53274775 - 53274651
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtat---ttgattttttagttttaaagctattttaaagttaaa 268  Q
    ||||| ||||||||||||||||||||   ||||  ||| | ||||||| |||||||| | |   ||  |||||||||| ||||| ||||||  |||||||    
T  53274775 tactttaaaacaaagttaaaataaagctctttaagaaaaaggttaaagctgtttggtttctttattttttttttagttctaaagttatttttgagttaaa 53274676  T
Q  269 tgttgtgtggcaaaatattgtacaa 293  Q
     | ||| ||||||||||||||||||    
T  53274675 agctgtttggcaaaatattgtacaa 53274651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 40849808 - 40849751
Alignment:
Q  236 attttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||||||||||| ||||| |||||| ||||||||  |||| || |||||||||||||||    
T  40849808 attttttagttataaagttatttttaagttaaaaattgtttgtcaaaatattgtacaa 40849751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 6940172 - 6940228
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  6940172 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 6940228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 7400203 - 7400259
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  7400203 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 7400259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 10137877 - 10137933
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  10137877 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 10137933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 13890990 - 13891046
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  13890990 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 13891046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 17624739 - 17624683
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| | ||| |||||||||||| |||||    
T  17624739 ttttttagttctaaagttatttttaagttaaaagctgtttggcaaaatattatacaa 17624683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 17976526 - 17976470
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||  |||||| |||||||| ||||| ||||||||||||| ||||    
T  17976526 ttttttagttctaaatttatttttaagttaaaagttgtttggcaaaatattgcacaa 17976470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 18138414 - 18138358
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||| | ||||| ||||||||||||    
T  18138414 ttttttagttctaaagttatttttaagttaaaagttctttggcataatattgtacaa 18138358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 28116837 - 28116893
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  28116837 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 28116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 28361487 - 28361543
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| | ||  |||||| |||||||| ||||| ||||||||||||||||||    
T  28361487 ttttttagttatgaatttatttttaagttaaaagttgtttggcaaaatattgtacaa 28361543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 32139381 - 32139325
Alignment:
Q  328 gcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||| |||||| | ||||| ||||||||||||| ||||||||| || ||||||||||    
T  32139381 gcatatatttatgtattgtccctatcaactgagctaagctcacgagaacaaaacttt 32139325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 32206590 - 32206646
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  32206590 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 32206646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 34264626 - 34264682
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||| ||||| ||||| ||||||  ||||||| ||||| ||||||||||||||||||    
T  34264626 ttttgtagttctaaagttatttttgagttaaaagttgtttggcaaaatattgtacaa 34264682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 36190053 - 36190109
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| ||||| || |||||||||||||||    
T  36190053 ttttttagttctaaagttatttttgagttaaaagttgtttgacaaaatattgtacaa 36190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 49125624 - 49125568
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||| | ||||| ||||||||||||    
T  49125624 ttttttagttctaaagttatttttaagttaaaagttctttggcataatattgtacaa 49125568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 55188249 - 55188193
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  55188249 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 55188193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 293
Target Start/End: Original strand, 156355 - 156619
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatgnnnnnnnnnnnnnn-tgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||               ||||||||||||||||||||||||     
T  156355 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatgtaaaaaggaagaaaatgacctcttatgaagaagaaagtgt 156454  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || || ||| ||| ||||||||||||||||||||| |||                  || ||||||||||||||||||||||||||| | ||||  |||     
T  156455 aagagagttcccagctgaacttagataccgtttggtcaa------------------aagttacttcaaaacaaagttaaaataaaggcctttaagaaat 156536  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||  |||||||||||||| | |||| ||||| |||||||||| ||| || |||||||||||||| ||||||||||||||||||    
T  156537 aatctaaagttgtttggtttctttgttttttaagttttaaagatatgtttaagttaaatgttgtttggcaaaatattgtacaa 156619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 156666 - 156728
Alignment:
Q  322 gacttggcatgtatttacgcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||||| |||||| |||||||| |||||| ||||| ||||||||| |||||||||||||    
T  156666 gacttggcatatatttatgcattgttgctatcagctgagctaagctcacgaggacaaaacttt 156728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 59; Significance: 7e-25; HSPs: 4)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 528 - 247
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg-nnnnnnnnnnnnnntgacctcttatgaagaagaaagtga 110  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||               |||||||||| |||||||||||||     
T  528 atgaacccctcaagccataaaaatcagtcaactcaagtcatgcatggtctcagaaccatgaaaaaaggaagacaatgacctcttaagaagaagaaagtgt 429  T
Q  111 aatagtgtttccaactgaacttagataccgtttggccaaggnnnnnnnacgacttgaaacttacttcaaaacaaagttaaaataaagacatttacaaaag 210  Q
    || ||| || ||| | |||||  |||| |||||| |||| |       |||   | ||  ||| ||||||||||||||||||||||| | ||||  ||||    
T  428 aacagttttcccatccgaactctgatatcgtttgaccaatg-gtttttacggtctaaatgttatttcaaaacaaagttaaaataaaggcctttaagaaag 330  T
Q  211 aagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    ||  |||||||||||||| | |||| ||| ||| ||||||||||||||| |||||||||||||| ||  ||||||||||||||    
T  329 aatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgtttgcaaaaatattgtacaa 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 1855 - 1737
Alignment:
Q  175 ttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    ||||||||||||||||||||||| | ||||  ||||||  |||||||||||||| | |||| ||| ||| ||||||||||||||| ||||||||||||||    
T  1855 ttcaaaacaaagttaaaataaaggcctttaagaaagaatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgt 1756  T
Q  275 gtggcaaaatattgtacaa 293  Q
     ||  ||||||||||||||    
T  1755 ttgcaaaaatattgtacaa 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 187 - 143
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  187 gcattgttcctatcaactgagttaagctcacgaggacaaaacttt 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 1677 - 1633
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  1677 gcattgttcctatcaactgagtaaagctcacgaggacaaaacttt 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 55329 - 55447
Alignment:
Q  175 ttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatgttgt 274  Q
    ||||||||||||||||||||||| | ||||  ||||||  |||||||||||||| | |||| ||| ||| ||||||||||||||| ||||||||||||||    
T  55329 ttcaaaacaaagttaaaataaaggcctttaagaaagaatctaaagttgtttggtttctttgttttcttaattttaaagctatttttaagttaaatgttgt 55428  T
Q  275 gtggcaaaatattgtacaa 293  Q
     ||  ||||||||||||||    
T  55429 ttgcaaaaatattgtacaa 55447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 55166 - 55225
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  55166 atgaacccctcaagccataaaaagcagtcaactcaagtcatgcatggtctcagaaccatg 55225  T

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Target: scaffold0088; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 55507 - 55551
Alignment:
Q  340 gcattgttcctatcaactgagttaagctcacaaggacaaaacttt 384  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  55507 gcattgttcctatcaactgagtaaagctcacaaggacaaaacttt 55551  T

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Target: scaffold0038 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 31509 - 31618
Alignment:
Q  171 ttacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgattttttagttttaaagctattttaaagttaaatg 270  Q
    ||||||||||||||||||||||||||| | ||||  ||||||| |||||||||||| |         ||||||||||||||| || ||| ||||||||||    
T  31509 ttacttcaaaacaaagttaaaataaaggcctttaagaaagaagctaaagttgtttgtt---------tttttagttttaaagttacttttaagttaaatg 31599  T
Q  271 ttgtgtggcaaaatattgt 289  Q
    |||| ||||||||||||||    
T  31600 ttgtttggcaaaatattgt 31618  T

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Target: scaffold0038; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 30191 - 30250
Alignment:
Q  12 atgaacccttcaagccataaaaattagtcaactcaagtcatgcatggtctgagaaccatg 71  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  30191 atgaacccctcaagccataaaaatcagtcaattcaagtcatgcatggtctcagaaccatg 30250  T

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Target: scaffold0318 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 1193 - 1083
Alignment:
Q  178 aaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggt----gtatttgattttttagttttaaagctattttaaagttaaatgttg 273  Q
    |||||||||||||||||||| |||||| |||| ||||||||| ||||||||     |||||  |||||||||||||||| |||||| |||||||| ||||    
T  1193 aaaacaaagttaaaataaagtcattta-aaaaaaagttaaagctgtttggtttcgttattt--ttttttagttttaaagttatttttaagttaaaagttg 1097  T
Q  274 tgtggcaaaatatt 287  Q
    | ||||||||||||    
T  1096 tttggcaaaatatt 1083  T

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Target: scaffold0198 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 15255 - 15311
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||    
T  15255 ttttttagttctaaagttatttttaagttaaaagttgtttggcaaaatattgtacaa 15311  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 229162 - 229106
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||| |||||| |||||||| ||||| ||| ||||||||||||||    
T  229162 ttttttagttttaaagttatttttaagttaaaagttgtttggtaaaatattgtacaa 229106  T

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Target: scaffold0244 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 7568 - 7624
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| |||||| |||||||| ||||| || |||||||||||||||    
T  7568 ttttttagttctaaagttatttttaagttaaaagttgtttgacaaaatattgtacaa 7624  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Original strand, 90386 - 90511
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgt----atttgattttttagttttaaagctattttaaagttaa 267  Q
    ||||| |||||||||||||||||||  | |||| |||| | | ||||| |||||||| |    ||||  ||||||| || ||||| |||||| |||||||    
T  90386 tactttaaaacaaagttaaaataaaatcctttaaaaaaaaggctaaagctgtttggtttctttatttatttttttaattctaaagttatttttaagttaa 90485  T
Q  268 atgttgtgtggcaaaatattgtacaa 293  Q
    | | ||| ||||||||||||||||||    
T  90486 aagctgtttggcaaaatattgtacaa 90511  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 290
Target Start/End: Complemental strand, 132806 - 132683
Alignment:
Q  172 tacttcaaaacaaagttaaaataaagacatttacaaaagaagttaaagttgtttggtgtatttgat-----tttttagttttaaagctattttaaagtta 266  Q
    ||||| ||||||||||||||||||||   ||||  ||| ||| ||||| |||||||| |||||  |     ||||||||| ||||| |||||| || |||    
T  132806 tactttaaaacaaagttaaaataaagctctttaagaaaaaagctaaagctgtttggtttattttttatttttttttagttctaaagttatttttaattta 132707  T
Q  267 aatgttgtgtggcaaaatattgta 290  Q
    || ||||| |||||||||||||||    
T  132706 aaagttgtttggcaaaatattgta 132683  T

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Target: scaffold0768 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 6269 - 6353
Alignment:
Q  211 aagttaaagttgtttggtgtatttgatttttt--agttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||||||||||| | |||  ||||||  || | ||||  |||||| |||||||| ||||| ||||||||||||||||||    
T  6269 aagttaaagttgtttggtttctttatttttttttagatctaaaattatttttaagttaaaagttgtttggcaaaatattgtacaa 6353  T

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Target: scaffold0481 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 7528 - 7472
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  7528 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 7472  T

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Target: scaffold0197 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 25788 - 25732
Alignment:
Q  237 ttttttagttttaaagctattttaaagttaaatgttgtgtggcaaaatattgtacaa 293  Q
    |||||||||| ||||| ||||||  ||||||| | ||| ||||||||||||||||||    
T  25788 ttttttagttctaaagttatttttgagttaaaagctgtttggcaaaatattgtacaa 25732  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Complemental strand, 119598 - 119562
Alignment:
Q  341 cattgttcctatcaactgagttaagctcacaaggaca 377  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  119598 cattgtccctatcaactgagttaagctcacgaggaca 119562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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