View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20021_low_13 (Length: 371)
Name: NF20021_low_13
Description: NF20021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20021_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 6 - 355
Target Start/End: Complemental strand, 45698401 - 45698051
Alignment:
| Q |
6 |
aggagcagagaacaatgtgacacatttaattttggacaggaataatgagtcacatcttagcaaacaaagaaaggtaaagtcaagatagaatgagtcacgt |
105 |
Q |
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|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45698401 |
aggaccagaaaacaatgtgacacatttaattttggacaggaataatgagtcacatcttagcaaacaaagaaaggtaaagtcaagatagaatgagtcacgt |
45698302 |
T |
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| Q |
106 |
gaatttcccccgtccacgtgaaattcacgccggcaacccacgtacaagacagagattcaaattcttcatggcgtgatcataatcacttttttgttggtca |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45698301 |
gaatttcccccgtccacgtgaaattcacgccggcaacccacgtacaagacagagattcaaattcttcatggcgtgatcataatcacttttttgttggtca |
45698202 |
T |
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| Q |
206 |
aattaagaccctccaaatttctctgcacttggtcactcacatttgtggtacatacatgaatgctcccaaagaagatggatgccctctggac-tgtgggtc |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
45698201 |
aattaagaccctccaaatttctctgcacttggtcactcacatttgtggtacatacatgaatgctcccaaagaagatggatgccctctggacttgtgggtc |
45698102 |
T |
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| Q |
305 |
actgctcactgaatgcgactaaaatcccattcttgggtgtgcataacaatt |
355 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45698101 |
actgctcactgaatgcgactaaaatcccattcttgggtgtgcataacaatt |
45698051 |
T |
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