View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20022_high_23 (Length: 295)
Name: NF20022_high_23
Description: NF20022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20022_high_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 56 - 295
Target Start/End: Complemental strand, 46852754 - 46852515
Alignment:
| Q |
56 |
ggttaaaaattcaatttttgtttctctgaatggagaatacatattactggaaaaccaaataatttttgttctgttgaataattaataaatttcttaactg |
155 |
Q |
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| T |
46852754 |
ggttaaaaattcaatttttgtttctctgaatggagaatacatattactggaaaaccaaataatttttgttctgttgaataattaataaatttcttaactg |
46852655 |
T |
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| Q |
156 |
atttgcttgttatgtgcatgccttgtgtgaacaggtcttttagttgaattgagtgataattctgtgannnnnnnaaattgaaagcttatttttgtattct |
255 |
Q |
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| T |
46852654 |
atttgcttgttatgtgcatgccttgtgtgaacaggtcttttagttgaattgagtgataattctgtgatttttttaaattgaaagcttatttttgtattct |
46852555 |
T |
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| Q |
256 |
aagggaagatttgttgatcaaatctggtatttattttgat |
295 |
Q |
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| T |
46852554 |
aagcgaagatttgttgatcaaatctggtatttattttgat |
46852515 |
T |
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