View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20022_low_20 (Length: 318)
Name: NF20022_low_20
Description: NF20022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20022_low_20 |
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Alignment Details
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 35723979 - 35724042
Alignment:
| Q |
16 |
ataagaaagaaaattaggtaaacacaaactaaaaacaaagaaactcatatatgttggttggcaaaa |
81 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
35723979 |
ataagaaagaaaattaggtaaacacaaactaaaaacaaagaaactc--atatgttggttggcaaaa |
35724042 |
T |
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