View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20022_low_36 (Length: 205)

Name: NF20022_low_36
Description: NF20022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20022_low_36
NF20022_low_36
[»] chr8 (33 HSPs)
chr8 (11-205)||(43324917-43325112)
chr8 (11-205)||(26169198-26169394)
chr8 (9-205)||(4081732-4081931)
chr8 (9-205)||(4085881-4086080)
chr8 (11-205)||(38982110-38982306)
chr8 (11-205)||(39013207-39013403)
chr8 (11-205)||(44058108-44058303)
chr8 (11-205)||(20164624-20164818)
chr8 (12-199)||(37482270-37482456)
chr8 (9-205)||(9556864-9557061)
chr8 (9-90)||(43323788-43323869)
chr8 (11-90)||(9555844-9555922)
chr8 (11-90)||(37483362-37483443)
chr8 (11-90)||(26170371-26170452)
chr8 (11-90)||(38983257-38983338)
chr8 (11-90)||(39014354-39014435)
chr8 (11-90)||(20165839-20165919)
chr8 (6-90)||(44057136-44057222)
chr8 (11-109)||(43827104-43827202)
chr8 (12-109)||(14529631-14529725)
chr8 (11-89)||(14530275-14530354)
chr8 (11-109)||(37871840-37871937)
chr8 (12-92)||(33284378-33284458)
chr8 (11-90)||(13163241-13163320)
chr8 (10-108)||(37124198-37124296)
chr8 (11-90)||(3777126-3777206)
chr8 (11-90)||(3777356-3777433)
chr8 (10-108)||(30680238-30680337)
chr8 (9-44)||(43828034-43828069)
chr8 (11-69)||(34985321-34985379)
chr8 (13-49)||(1178388-1178424)
chr8 (11-75)||(38980147-38980211)
chr8 (11-75)||(39011244-39011308)
[»] chr7 (50 HSPs)
chr7 (11-205)||(39174264-39174457)
chr7 (13-205)||(35357455-35357647)
chr7 (11-205)||(15992329-15992524)
chr7 (13-205)||(37746060-37746252)
chr7 (11-200)||(32042837-32043025)
chr7 (10-205)||(7468063-7468259)
chr7 (11-205)||(28240667-28240862)
chr7 (11-205)||(11845718-11845910)
chr7 (15-205)||(27249972-27250164)
chr7 (13-205)||(39049940-39050135)
chr7 (11-205)||(44377462-44377657)
chr7 (11-205)||(44386329-44386524)
chr7 (54-205)||(29674557-29674709)
chr7 (11-205)||(21520444-21520636)
chr7 (9-123)||(11651338-11651452)
chr7 (83-203)||(30465132-30465251)
chr7 (9-85)||(32040951-32041027)
chr7 (11-90)||(15993748-15993827)
chr7 (11-90)||(48989279-48989357)
chr7 (123-205)||(11651421-11651503)
chr7 (11-88)||(39050620-39050698)
chr7 (11-90)||(44378679-44378759)
chr7 (11-90)||(44387546-44387626)
chr7 (11-90)||(44523503-44523581)
chr7 (72-178)||(48991598-48991704)
chr7 (9-109)||(8490803-8490901)
chr7 (11-90)||(27251096-27251177)
chr7 (11-90)||(37747401-37747480)
chr7 (9-90)||(28241794-28241876)
chr7 (10-90)||(7469221-7469302)
chr7 (9-90)||(30917394-30917474)
chr7 (11-70)||(28394998-28395057)
chr7 (9-109)||(8517610-8517708)
chr7 (12-84)||(34459195-34459268)
chr7 (14-90)||(11652456-11652531)
chr7 (11-85)||(26906460-26906536)
chr7 (11-85)||(34461123-34461199)
chr7 (20-70)||(36709208-36709259)
chr7 (10-71)||(23371448-23371509)
chr7 (28-90)||(11847077-11847141)
chr7 (11-71)||(23784584-23784644)
chr7 (11-106)||(1853366-1853461)
chr7 (11-86)||(26905200-26905273)
chr7 (11-70)||(42957664-42957723)
chr7 (11-75)||(29675637-29675703)
chr7 (53-106)||(3092495-3092548)
chr7 (11-71)||(35913280-35913341)
chr7 (9-69)||(38193192-38193253)
chr7 (10-38)||(5766637-5766665)
chr7 (14-90)||(35359266-35359345)
[»] chr6 (34 HSPs)
chr6 (9-205)||(2404909-2405106)
chr6 (11-205)||(19634502-19634697)
chr6 (1-205)||(17184427-17184630)
chr6 (11-205)||(28189112-28189308)
chr6 (11-205)||(34492279-34492473)
chr6 (12-205)||(5756260-5756452)
chr6 (11-173)||(18325541-18325703)
chr6 (32-205)||(28743659-28743832)
chr6 (54-205)||(28564157-28564308)
chr6 (45-205)||(16840939-16841100)
chr6 (17-205)||(3587012-3587197)
chr6 (11-121)||(17139767-17139875)
chr6 (120-203)||(29057356-29057438)
chr6 (14-90)||(17183323-17183398)
chr6 (9-90)||(28188110-28188192)
chr6 (11-84)||(20400141-20400216)
chr6 (24-123)||(29057404-29057502)
chr6 (11-123)||(24672559-24672673)
chr6 (11-90)||(28562775-28562855)
chr6 (11-90)||(2403674-2403753)
chr6 (13-109)||(29056776-29056866)
chr6 (11-109)||(33198525-33198623)
chr6 (11-90)||(34491151-34491235)
chr6 (11-124)||(995853-995966)
chr6 (48-109)||(3816721-3816782)
chr6 (9-85)||(14328628-14328705)
chr6 (9-85)||(14421638-14421715)
chr6 (124-205)||(17139847-17139926)
chr6 (11-67)||(29942444-29942500)
chr6 (11-90)||(18867228-18867306)
chr6 (11-90)||(19635831-19635913)
chr6 (10-63)||(10344049-10344102)
chr6 (12-69)||(19325614-19325671)
chr6 (11-75)||(17141192-17141256)
[»] chr3 (32 HSPs)
chr3 (9-205)||(23494348-23494544)
chr3 (11-205)||(26165877-26166071)
chr3 (11-205)||(18320814-18321010)
chr3 (11-205)||(28039844-28040036)
chr3 (12-205)||(24170599-24170794)
chr3 (20-205)||(49116400-49116593)
chr3 (11-90)||(5117364-5117443)
chr3 (11-90)||(26167202-26167280)
chr3 (11-109)||(5117789-5117887)
chr3 (11-90)||(5118779-5118858)
chr3 (11-90)||(38601337-38601417)
chr3 (11-90)||(39274586-39274666)
chr3 (9-90)||(24171764-24171847)
chr3 (11-89)||(49116811-49116891)
chr3 (11-121)||(38602541-38602647)
chr3 (12-90)||(23495720-23495797)
chr3 (9-90)||(7104544-7104623)
chr3 (14-90)||(27988345-27988422)
chr3 (11-90)||(28038786-28038864)
chr3 (150-205)||(21959937-21959992)
chr3 (11-109)||(50563945-50564042)
chr3 (11-90)||(7104642-7104723)
chr3 (11-109)||(27989272-27989372)
chr3 (48-106)||(7308276-7308334)
chr3 (28-106)||(55257658-55257736)
chr3 (11-90)||(46565260-46565335)
chr3 (9-84)||(39747155-39747229)
chr3 (11-69)||(27760289-27760347)
chr3 (9-69)||(8355565-8355626)
chr3 (10-90)||(39273663-39273744)
chr3 (11-68)||(49872949-49873006)
chr3 (11-67)||(49116362-49116417)
[»] scaffold0862 (2 HSPs)
scaffold0862 (11-205)||(684-879)
scaffold0862 (11-90)||(2127-2206)
[»] chr1 (46 HSPs)
chr1 (17-205)||(50962537-50962726)
chr1 (11-205)||(27902953-27903149)
chr1 (11-205)||(36632121-36632313)
chr1 (11-205)||(49762585-49762780)
chr1 (11-205)||(10374134-10374329)
chr1 (10-205)||(16829853-16830050)
chr1 (12-205)||(48642062-48642254)
chr1 (11-205)||(20159222-20159416)
chr1 (11-205)||(46625653-46625849)
chr1 (11-205)||(22059655-22059847)
chr1 (11-205)||(7378301-7378495)
chr1 (72-205)||(32975645-32975778)
chr1 (11-90)||(50961356-50961435)
chr1 (10-104)||(27362112-27362208)
chr1 (11-120)||(17864837-17864948)
chr1 (11-124)||(45459212-45459326)
chr1 (11-90)||(48643316-48643396)
chr1 (11-109)||(27904237-27904335)
chr1 (11-109)||(38174065-38174160)
chr1 (9-90)||(9774962-9775041)
chr1 (16-90)||(49664356-49664430)
chr1 (10-90)||(49763678-49763760)
chr1 (11-90)||(16831030-16831111)
chr1 (11-90)||(20160396-20160477)
chr1 (11-120)||(17865623-17865734)
chr1 (9-90)||(27361382-27361465)
chr1 (11-123)||(38132610-38132722)
chr1 (11-75)||(22058697-22058761)
chr1 (9-109)||(49663431-49663531)
chr1 (11-90)||(6668283-6668364)
chr1 (9-109)||(7377353-7377453)
chr1 (12-121)||(45459658-45459766)
chr1 (11-90)||(46624604-46624685)
chr1 (16-106)||(6667331-6667422)
chr1 (21-109)||(162760-162847)
chr1 (11-86)||(161687-161761)
chr1 (11-70)||(21796115-21796176)
chr1 (9-84)||(21813819-21813896)
chr1 (60-106)||(5469341-5469387)
chr1 (13-109)||(9775814-9775906)
chr1 (11-106)||(22315145-22315242)
chr1 (12-91)||(32976819-32976897)
chr1 (13-69)||(21853418-21853474)
chr1 (11-71)||(24987608-24987668)
chr1 (9-81)||(39910646-39910716)
chr1 (9-69)||(42736820-42736880)
[»] chr2 (24 HSPs)
chr2 (12-205)||(25979588-25979780)
chr2 (11-205)||(5202729-5202924)
chr2 (15-205)||(15248393-15248585)
chr2 (11-154)||(18695346-18695492)
chr2 (66-205)||(43238401-43238540)
chr2 (92-205)||(18695461-18695574)
chr2 (75-205)||(18748046-18748176)
chr2 (9-123)||(9894488-9894602)
chr2 (9-90)||(15249517-15249599)
chr2 (120-205)||(9894437-9894522)
chr2 (11-120)||(22285998-22286109)
chr2 (12-121)||(10746220-10746330)
chr2 (11-120)||(18859073-18859182)
chr2 (12-120)||(42742799-42742905)
chr2 (122-205)||(42742876-42742959)
chr2 (9-90)||(18748777-18748859)
chr2 (11-90)||(42744085-42744165)
chr2 (120-157)||(18859151-18859188)
chr2 (120-173)||(22286078-22286131)
chr2 (12-69)||(22535682-22535739)
chr2 (54-90)||(5203760-5203795)
chr2 (11-82)||(29099741-29099812)
chr2 (13-41)||(34384754-34384782)
chr2 (1-108)||(44579216-44579324)
[»] chr4 (46 HSPs)
chr4 (9-205)||(53552157-53552354)
chr4 (7-205)||(42250134-42250330)
chr4 (12-205)||(21021089-21021284)
chr4 (11-201)||(33269381-33269571)
chr4 (11-205)||(25437930-25438126)
chr4 (13-205)||(2713172-2713366)
chr4 (11-151)||(46079141-46079281)
chr4 (15-205)||(23020011-23020203)
chr4 (11-205)||(30606025-30606221)
chr4 (11-205)||(34422052-34422248)
chr4 (11-205)||(10670329-10670519)
chr4 (11-205)||(10883968-10884158)
chr4 (11-205)||(21076990-21077182)
chr4 (15-205)||(40315244-40315435)
chr4 (15-205)||(40325319-40325510)
chr4 (54-205)||(46575964-46576115)
chr4 (11-202)||(2568155-2568344)
chr4 (93-205)||(48182854-48182966)
chr4 (12-147)||(2856285-2856420)
chr4 (9-192)||(48509443-48509625)
chr4 (11-99)||(48183152-48183241)
chr4 (11-90)||(21075157-21075236)
chr4 (120-205)||(21463006-21463091)
chr4 (11-90)||(40314216-40314296)
chr4 (11-90)||(40324292-40324372)
chr4 (11-90)||(30607169-30607250)
chr4 (11-90)||(34423196-34423277)
chr4 (126-205)||(10336849-10336928)
chr4 (11-90)||(25439102-25439182)
chr4 (11-90)||(48181824-48181905)
chr4 (11-110)||(1968184-1968282)
chr4 (9-85)||(4499769-4499847)
chr4 (54-120)||(21462971-21463037)
chr4 (9-90)||(23018999-23019081)
chr4 (11-85)||(4493691-4493767)
chr4 (14-90)||(46577059-46577134)
chr4 (11-90)||(46080519-46080598)
chr4 (11-83)||(21020033-21020107)
chr4 (11-80)||(48508289-48508359)
chr4 (12-90)||(468216-468295)
chr4 (165-205)||(46079497-46079537)
chr4 (19-90)||(10671480-10671549)
chr4 (19-90)||(10885120-10885189)
chr4 (14-75)||(2569107-2569167)
chr4 (170-205)||(21463130-21463165)
chr4 (14-90)||(33268196-33268271)
[»] chr5 (32 HSPs)
chr5 (11-205)||(3371190-3371384)
chr5 (11-205)||(7121320-7121515)
chr5 (15-205)||(40721676-40721864)
chr5 (11-200)||(21789549-21789739)
chr5 (11-205)||(42536929-42537123)
chr5 (11-200)||(21715633-21715823)
chr5 (11-205)||(31796926-31797121)
chr5 (9-90)||(3859757-3859839)
chr5 (52-122)||(25641861-25641930)
chr5 (11-90)||(14212383-14212464)
chr5 (9-90)||(40728250-40728333)
chr5 (120-200)||(25641897-25641976)
chr5 (9-90)||(3370126-3370209)
chr5 (11-109)||(7216575-7216673)
chr5 (19-109)||(294328-294416)
chr5 (121-200)||(3860736-3860815)
chr5 (11-90)||(7122484-7122564)
chr5 (14-90)||(25642706-25642782)
chr5 (126-205)||(25796276-25796355)
chr5 (9-90)||(15839279-15839363)
chr5 (11-70)||(7006347-7006404)
chr5 (11-69)||(10976746-10976804)
chr5 (59-109)||(27757653-27757702)
chr5 (12-97)||(293067-293152)
chr5 (33-90)||(21716853-21716909)
chr5 (33-90)||(21796589-21796645)
chr5 (11-71)||(38482318-38482379)
chr5 (11-90)||(42536144-42536220)
chr5 (32-121)||(3860784-3860875)
chr5 (165-205)||(18574859-18574899)
chr5 (11-75)||(22714523-22714587)
chr5 (11-90)||(31795820-31795899)
[»] scaffold0013 (2 HSPs)
scaffold0013 (11-205)||(100770-100966)
scaffold0013 (9-90)||(99611-99693)
[»] scaffold0230 (1 HSPs)
scaffold0230 (11-173)||(18652-18814)
[»] scaffold0760 (1 HSPs)
scaffold0760 (12-205)||(1184-1377)
[»] scaffold0012 (3 HSPs)
scaffold0012 (9-123)||(53370-53485)
scaffold0012 (123-205)||(53454-53536)
scaffold0012 (13-90)||(54485-54562)
[»] scaffold0087 (1 HSPs)
scaffold0087 (12-90)||(42090-42171)
[»] scaffold0606 (1 HSPs)
scaffold0606 (12-98)||(1316-1400)
[»] scaffold0300 (1 HSPs)
scaffold0300 (11-123)||(15736-15850)
[»] scaffold0188 (1 HSPs)
scaffold0188 (11-106)||(13352-13447)
[»] scaffold0265 (1 HSPs)
scaffold0265 (9-84)||(18913-18990)
[»] scaffold0450 (1 HSPs)
scaffold0450 (11-69)||(7859-7917)
[»] scaffold0032 (1 HSPs)
scaffold0032 (11-68)||(91050-91107)
[»] scaffold0142 (1 HSPs)
scaffold0142 (9-69)||(34825-34885)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 7e-88; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 43325112 - 43324917
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccc-cctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43325112 gggttaatatgtctttaccccctgtaatttgagtgagttccggtttacccacctgtaaaaataaaagtttagattccaaccctataatatgaagattctt 43325013  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  43325012 cacaaaacacccctataataataagattctccacaaaacacccctgaccccgtccagacgctgatgtggcatgccactgtgtaattattttaattt 43324917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 26169198 - 26169394
Alignment:
Q  11 gggttaatatgtctttac-cccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||  ||||||||||||||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  26169198 gggttaatatgtctttattcccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 26169297  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
      ||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  26169298 ctacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 26169394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 4081931 - 4081732
Alignment:
Q  9 ttgggttaatatgtctttaccccct--gtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagat 105  Q
    |||||||||||||||||||||||||  |||||||||| |||||| ||||| ||||| |||||||| ||||||||||||||||||| |||||||| |||||    
T  4081931 ttgggttaatatgtctttaccccctctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagat 4081832  T
Q  106 tcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||| |||||||||||| | |||||| ||||||||||||||||||||  |||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4081831 tctccacaaaacacccttgtaatatgaagattctccacaaaacacctttgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 4081732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 4086080 - 4085881
Alignment:
Q  9 ttgggttaatatgtctttaccccct--gtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagat 105  Q
    |||||||||||||||||||||||||  |||||||||| |||||| ||||| ||||| |||||||| ||||||||||||||||||| |||||||| |||||    
T  4086080 ttgggttaatatgtctttaccccctctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagat 4085981  T
Q  106 tcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||| |||||||||||| | |||||| ||||||||||||||||||||  |||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4085980 tctccacaaaacacccttgtaatatgaagattctccacaaaacacctttgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 4085881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 38982110 - 38982306
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  38982110 gggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 38982209  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||    
T  38982210 ccacaaaacacccctgtaatatgaagattcttcacaaaacacccctgaccccattcaaacgctgatgtggcacgccactgtgtaattattttaattt 38982306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 39013207 - 39013403
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  39013207 gggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 39013306  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||    
T  39013307 ccacaaaacacccctgtaatatgaagattcttcacaaaacacccctgaccccattcaaacgctgatgtggcacgccactgtgtaattattttaattt 39013403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 44058303 - 44058108
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttac-cccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||| | |||||||||||| ||||||||||||||||||| |||||||| ||||||||     
T  44058303 gggttaatatgtctttacctcctgtaatttgggcgagttccggtttcctcccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 44058204  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||| || | | |||||| |||||||||| ||||||| ||||||| |||| || |||||||||||||| ||||||||||||||||||||||||    
T  44058203 cacaaaatacacatgtaatatgaagattctccccaaaacaaccctgaccccattcatacgctgatgtggcacgccactgtgtaattattttaattt 44058108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 20164624 - 20164818
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||||| |||||||| || |||||    
T  20164624 gggttaatatgtctttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaa-aaaagtttagatttcaaccctataatataaaaattct 20164722  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||| | |||||| ||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||||||||    
T  20164723 ccacaaaacaccc-tgtaatatgaagatcctccacaaaacacccctgaccctattcagacgctgatgtggcacgccactgtgtaattattttaattt 20164818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 37482270 - 37482456
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttca 111  Q
    |||||||||||||||| ||| |||||||| || ||||||||||||| ||| |||||||| || |||||||||||||||| ||||||||||||||||| ||    
T  37482270 ggttaatatgtctttatcccttgtaatttaggcgagttctggtttatcccttgtaaaaa-aagagtttagattccaaccttataatatgaagattctcca 37482368  T
Q  112 caaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattt 199  Q
    ||||||||| || |||||| |||||| ||||||||||||| ||||| ||||||||||| ||| |||||| ||||||||||| ||||||    
T  37482369 caaaacaccgctgtaatatgaagattttccacaaaacacctctgaccccatccagacgttgacgtggcacgccactgtgtagttattt 37482456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 9557061 - 9556864
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttacc-ccctgtaaaaataaaag-tttagattccaaccatataatatgaagatt 106  Q
    ||||||||||||||||||| ||| ||||||||||  |||||  ||||| || ||||||||||| ||||  |||||||||||||| |||||||| ||||||    
T  9557061 ttgggttaatatgtctttatccc-tgtaatttggacgagtttcggttttcctccctgtaaaaaaaaaaaatttagattccaaccctataatataaagatt 9556963  T
Q  107 cttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    || |||||||||||||| |||||| ||||||||| |||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||    
T  9556962 ctccacaaaacacccctgtaatatgaagattctctacaaaacacccctgaccccattcagacgctgatgtggcacgccattgtgtaattattttaattt 9556864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 43323788 - 43323869
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||| |||||||||||||||||||    
T  43323788 ttgggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaagtttagattccaacc 43323869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 9555844 - 9555922
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||    
T  9555844 gggttaatatgtctttaccccctgtaatttgggcgagttccggttttccccctgtaaaaa-aaaagtttagattccaacc 9555922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 37483443 - 37483362
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgta--aaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||  |||| |||||||||||||||||||    
T  37483443 gggttaatatgtctttaccccctgtaatttggacgagttctggtttaccccctgtaaaaaaaaaaaagtttagattccaacc 37483362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 26170452 - 26170371
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggttt--accccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||||||||||| || |||||| |||||   ||||||||||||| |||||||||||||||||||    
T  26170452 gggttaatatgtctttaccccctgtaatttaggcgagttccggttttccccccctgtaaaaaaaaaagtttagattccaacc 26170371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 38983338 - 38983257
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  38983338 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 38983257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 39014435 - 39014354
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  39014435 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 39014354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 20165919 - 20165839
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||| | ||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||    
T  20165919 gggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaacc 20165839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 44057136 - 44057222
Alignment:
Q  6 atgttgggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaacc 90  Q
    |||| |||||||||||| ||||||||| ||||||||||| |||||| ||||| |||| ||||||||| |||||||||||||||||||    
T  44057136 atgtagggttaatatgtatttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 44057222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 43827104 - 43827202
Alignment:
Q  11 gggttaatatgtcttta-ccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||||||| ||||||||||||||||  ||||| | |||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||    
T  43827104 gggttaatatgtctttatccccctgtaatttgggcaagttccgatttaaccccctgtaaaaa-aaaagtttagattccaaccctataaaat-aagattct 43827201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 14529631 - 14529725
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||||| ||||||||||| |||||| | ||||||| | ||||||  |||| |||||||||||||| | |||| |||||||||||    
T  14529631 ggttaatatgtctttaccccatgtaatttgggcgagttccgatttaccctc-gtaaaa--aaaaatttagattccaaccctgtaatttgaagattctt 14529725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 14530354 - 14530275
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaac 89  Q
    |||||||||| ||||||||  |||||||||||| |||||  ||||||| || ||||||||||||||||||| ||||||||    
T  14530354 gggttaatatatctttaccgtctgtaatttgggcgagtttcggtttacacctctgtaaaaataaaagtttacattccaac 14530275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 37871937 - 37871840
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||| |||||||||| ||| |||||||||||||||||| |||||| ||  |||||||| || |||||| ||| ||||| | |||| |||||||||||    
T  37871937 gggttagtatgtctttagccc-tgtaatttgggtgagttccggtttatcctttgtaaaaaaaatagtttaaatttcaaccttgtaatttgaagattctt 37871840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 33284378 - 33284458
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgt-aaaaataaaagtttagattccaaccat 92  Q
    |||||||||||||||||||| ||||||||||| |||||  ||||||||| |||| ||||| ||||  |||||||||||||||    
T  33284378 ggttaatatgtctttacccc-tgtaatttgggcgagtttcggtttaccctctgtaaaaaaaaaaaaattagattccaaccat 33284458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 13163241 - 13163320
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||| |||||||| ||| ||||||||| |||||| ||||||||||||| |   |||||||||||||||    
T  13163241 gggttaatatgtcttta-cccctgtattttaggtgagttccggtttatccccctgtaaaaaaatttgtttagattccaacc 13163320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 37124198 - 37124296
Alignment:
Q  10 tgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaa-agtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||| ||||||||||||||| || |||  ||||| ||  |||||||| |||  ||||||||||||||| || || |||||||||||    
T  37124198 tgggttaatatgtcttta-cccctgtaatttgggcgaattccagtttatcctatgtaaaaaaaaattgtttagattccaaccttaaaaaatgaagattct 37124296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 3777126 - 3777206
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc--ctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| |||||||| |||||||| |  |||||| ||||||||||  || |||||| |||||||||||||||||||    
T  3777126 gggttaatatgtatttacccc-tgtaatttagacgagttccggtttacccctcctataaaaaaaaaagtttagattccaacc 3777206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 3777433 - 3777356
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||| ||| ||||||||  || ||| |||||| ||| |  |||||||||||||||||||||||||    
T  3777433 gggttaatatgtctttacctcct-taatttggacgaattccggtttatccctta-aaaaataaaagtttagattccaacc 3777356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 30680238 - 30680337
Alignment:
Q  10 tgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||||| || ||| ||||||||||| ||||||  |||||||||| |||||||| |   |||||||||| |||| |  || |||||||||||    
T  30680238 tgggttaatatgtctctatcccatgtaatttgggcgagttccagtttacccccttgtaaaaaaatttgtttagattctaaccttgaaaaatgaagattct 30680337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 43828069 - 43828034
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggt 44  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43828069 ttgggttaatatgtctttaccccctctaatttgggt 43828034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 34985379 - 34985321
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||||| |||||||||||||||||| | ||| | ||||||||| | ||||||||||    
T  34985379 gggttaataggtctttaccccctgtaatataggtcatttctggttttcgccctgtaaaa 34985321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 1178424 - 1178388
Alignment:
Q  13 gttaatatgtctttaccccctgtaatttgggtgagtt 49  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  1178424 gttaacatgtctttaccccctgtaatttgggcgagtt 1178388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 38980211 - 38980147
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa 75  Q
    ||||||||| || |||||||||||| ||||||| |  || ||||||||||||| |||||| ||||    
T  38980211 gggttaataggtttttaccccctgtcatttgggagtcttttggtttaccccctataaaaaaaaaa 38980147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 39011308 - 39011244
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa 75  Q
    ||||||||| || |||||||||||| ||||||| |  || ||||||||||||| |||||| ||||    
T  39011308 gggttaataggtttttaccccctgtcatttgggagtcttttggtttaccccctataaaaaaaaaa 39011244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 7e-85; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 39174264 - 39174457
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||    
T  39174264 gggttaatatgtctttacccactgtaatttgggcgagttctggtttacccc-tgtaaaaataaaagtttagattccaatcctataatatgaagattcttc 39174362  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  39174363 acaaaacacccctataatattaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 39174457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 35357455 - 35357647
Alignment:
Q  13 gttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcac 112  Q
    ||||||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  35357455 gttaatatgtctttaccccctataatttggacgagttccggtttaccccctgtaaaaataaaagtttagattctaaccctataatatgaagattcttcac 35357554  T
Q  113 aaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  35357555 aaaacacccctataatattaagattctccacaaaacacctctgaccccatccagacgctgatgtggcacgccactgtgtaattattttaattt 35357647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 15992329 - 15992524
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  15992329 gggttaatatgtctttacccccctgtaatttgggcgagttccggtttaccccctgtaaaaataaaagtttagatttcaaccctataatatgaagattctt 15992428  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15992429 cacaaaacacctctataatattaagattctctacaaaacacccctgaccccatcaagacgctgatgtggcacgccactgtgtaattattttaattt 15992524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 37746060 - 37746252
Alignment:
Q  13 gttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcac 112  Q
    ||||||||||||| ||||||||||||||||   ||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  37746060 gttaatatgtcttcaccccctgtaatttggacaagttccggtttatcccctgtaaaaataaaagtttagattccaaccctatcatatgaagattcttcac 37746159  T
Q  113 aaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||||||    
T  37746160 aaaacacccctataatattaagattctccacaaaacacccctgaccccatgcagacgttgatgtggcacgccactgtgtaattattttaattt 37746252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 32043025 - 32042837
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||||||||||||||||  |||||  |||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32043025 gggttaatatgtctttaccccctgtaatttggacgagtttcggtttacccc-tgtaaaaataaaagtttagatttcaaccctataatatgaagattcttc 32042927  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattatttt 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | || ||||||||||||||    
T  32042926 acaaaacacccctataatattaagattctccacaaaacacccttgaccccatccagacgctgatgtggcacgtcaatgtgtaattatttt 32042837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 10 - 205
Target Start/End: Original strand, 7468063 - 7468259
Alignment:
Q  10 tgggttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  7468063 tgggttaatatgtctttaccccctgtaatttgggcgagttccggtttttccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 7468162  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     ||||||||| |||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  7468163 ccacaaaacatccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 7468259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 28240667 - 28240862
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||     
T  28240667 gggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccctctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 28240766  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  28240767 cacaaaacacccctgtaatatgaagattcttcacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 28240862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 11845718 - 11845910
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||| |||  |||||||||| ||||||||||||||||  ||||||||||||| |||||||| ||||| || ||||||||||||||||    
T  11845718 gggttaatatgtctttatccca-gtaatttgggcgagttctggtttaccct-tgtaaaaataaaaatttagatttcaaccctacaatatgaagattcttc 11845815  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11845816 acaaaacacccctataatattaagattctccacaaaacacctctgacctcatccagacgctgatgtggcacgccactgtgtaattattttaattt 11845910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 27249972 - 27250164
Alignment:
Q  15 taatatgtctttacccc-ctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcac 112  Q
    ||||||||||||||||| |||||||||||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||||| |||||||| |||    
T  27249972 taatatgtctttaccccgctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctccac 27250071  T
Q  113 aaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  27250072 aaaacacccctgtaatatgaagattcttcacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattatttttattt 27250164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 39049940 - 39050135
Alignment:
Q  13 gttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaa-gtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||||| |||||||| || |||||| ||||| ||||| |||||||| |||| ||||||||||||||| |||||||| ||||||||     
T  39049940 gttaatatgtctttacccccctgtaattttggcgagttccggttttcccccctgtaaaaaaaaaaagtttagattccaaccctataatataaagattctc 39050039  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  39050040 cacaaaacacccctgtaatatgaagattctccacaaaacacccttgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 39050135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 44377462 - 44377657
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||||| |||||||| || |||||    
T  44377462 gggttaatatgtctttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagatttcaaccctataatataaaaattct 44377561  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||| | |||||| ||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||||||||    
T  44377562 ccacaaaacaccc-tgtaatatgaagatcctccacaaaacacccctgaccctattcagacgctgatgtggcacgccactgtgtaattattttaattt 44377657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 44386329 - 44386524
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||||| |||||||| || |||||    
T  44386329 gggttaatatgtctttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagatttcaaccctataatataaaaattct 44386428  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||| | |||||| ||||| |||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||||||||    
T  44386429 ccacaaaacaccc-tgtaatatgaagatcctccacaaaacacccctgaccctattcagacgctgatgtggcacgccactgtgtaattattttaattt 44386524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 29674557 - 29674709
Alignment:
Q  54 tttaccccctgtaaaaataaaa-gtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacaccc 152  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||| |||||| | |||||||||||||| |||||| |||||||||||||||||||||    
T  29674557 tttaccccctgtaaaaaaaaaaagtttagattccaaccctataatataaagattttccacaaaacacccctgtaatatgaagattctccacaaaacaccc 29674656  T
Q  153 ctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  29674657 ctgaccccatccagacgctgatgtggcacgccactgtataattattttaattt 29674709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 21520444 - 21520636
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    |||||||||||  ||||||||||||||||| || |||||| || |||||||||||||||| || |||||||| ||||||| ||||||||||||||||| |    
T  21520444 gggttaatatgattttaccccctgtaatttaggcgagttccggcttaccccctgtaaaaa-aacagtttagagtccaaccctataatatgaagattctcc 21520542  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||| | |||| |||||| |||||||||||||||||||||||||| ||||||| ||||||| |||| | |||| |||||||||||||||||||    
T  21520543 acaaaa-atccctgtaatatgaagattctccacaaaacacccctgaccccatccaaacgctgacgtggtacgccattgtgtaattattttaattt 21520636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 11651338 - 11651452
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  11651338 ttgggttaatatgtctttaccccctgtaatttgggcgagttccggtttaccccctgtaaaaaaagaagtttagatttcaaccatataatatgaagattct 11651437  T
Q  109 tcacaaaacacccct 123  Q
     ||||||||||||||    
T  11651438 ccacaaaacacccct 11651452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 30465132 - 30465251
Alignment:
Q  83 ttccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatg 182  Q
    |||||||| ||||||||||||||| | |||||| || |||  |||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||| |    
T  30465132 ttccaaccctataatatgaagattttccacaaa-catccccgtaatatgaagattctccacaaaacacccctgaccccatccacacgctgacgtggcacg 30465230  T
Q  183 ccactgtgtaattattttaat 203  Q
    ||| |||||||||||| ||||    
T  30465231 ccattgtgtaattattataat 30465251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 32040951 - 32041027
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattc 85  Q
    |||||||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||    
T  32040951 ttgggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaagtttagattc 32041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 15993827 - 15993748
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  15993827 gggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaatgtttagattccaacc 15993748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 48989279 - 48989357
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||| |||||||||||||||||||    
T  48989279 gggttaatatgtctttaccccctgtaatttgggcgactttcggtttaccccctgtaaaaa-aaaagtttagattccaacc 48989357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 11651421 - 11651503
Alignment:
Q  123 tataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||||||| |||||| |||| | |||||||||||||||||    
T  11651421 tataatatgaagattctccacaaaacacccctgaccccacccagacgctgacgtggcacgccagtatgtaattattttaattt 11651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 39050698 - 39050620
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaa 88  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||    
T  39050698 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaa 39050620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 44378759 - 44378679
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||| | ||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||    
T  44378759 gggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaacc 44378679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 44387626 - 44387546
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||| | ||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||    
T  44387626 gggttaatatgtatttacccccctctaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaacc 44387546  T

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Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 44523581 - 44523503
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  || |  |||||| |||||||||||||||||||    
T  44523581 gggttaatatgtctttaccccctgtaatttgggcgagttctggtttttcctcc-taaaaaaaaaagtttagattccaacc 44523503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 48991704 - 48991598
Alignment:
Q  72 aaaagtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgct 171  Q
    ||||||||| ||| ||||| ||||||||||||| || ||||||||||||| | | |||| |||||||||| |||||||||| ||||  ||| ||||||||    
T  48991704 aaaagtttatatttcaaccctataatatgaagagtcatcacaaaacacccttgtgatatgaagattctccgcaaaacacccatgacctcattcagacgct 48991605  T
Q  172 gatgtgg 178  Q
    || ||||    
T  48991604 gacgtgg 48991598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 8490901 - 8490803
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||| ||||||||  ||||||||||| |||||| ||||||| |||  || ||| ||||||||||||||||||| | |||| ||||||||||    
T  8490901 ttgggttaatatgcctttaccctatgtaatttgggcgagttccggtttactccc--tagaaaaaaaagtttagattccaaccctgtaatttgaagattct 8490804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 27251177 - 27251096
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| | ||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  27251177 gggttaatatgtctttacccccctataatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 27251096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 37747480 - 37747401
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacc-ccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||||||||||| || |||||| |||||||| ||| ||||||| |||||||||||||||||||    
T  37747480 gggttaatatgtatttaccccctgtaatttaggcgagttccggtttacctcccagtaaaaa-aaaagtttagattccaacc 37747401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 28241876 - 28241794
Alignment:
Q  9 ttgggttaatatgtctttaccc-cctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||  ||||||||| |||||||||||||  | ||| ||||| ||||||||||||| |||||||||||||||||||    
T  28241876 ttgggttaatacatctttaccctcctgtaatttgggcaaattccggttttccccctgtaaaaaaaaaagtttagattccaacc 28241794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 7469302 - 7469221
Alignment:
Q  10 tgggttaatatgtctttaccccctgtaatttgggtgagtt-ctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||| |||||||||||||||||||  ||||| | | ||| |||||| |||||| |||||||||||||||||||    
T  7469302 tgggttaatatgtttttaccccctgtaatttggacgagttccagtttttccccctataaaaaaaaaagtttagattccaacc 7469221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 30917474 - 30917394
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| ||| | |||||||||||||| |||||  | ||||||||||||||||| ||| |||||||||||||||    
T  30917474 ttgggttaatatgtttttcctccctgtaatttgggcgagtttcgatttaccccctgtaaaaa-aaaggtttagattccaacc 30917394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 28395057 - 28394998
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaa 70  Q
    ||||||||| || ||||||||| |||||||||| |||||| |||||||||||||||||||    
T  28395057 gggttaatacgtatttaccccccgtaatttgggcgagttccggtttaccccctgtaaaaa 28394998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 8517708 - 8517610
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||| ||||||||  ||||||||||| | |||| ||||||| |||  || ||| ||||||| ||||||||||| | |||| ||||||||||    
T  8517708 ttgggttaatatgcctttaccctatgtaatttgggcgcgttccggtttactccc--tagaaaaaaaagttcagattccaaccctgtaatttgaagattct 8517611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 34459195 - 34459268
Alignment:
Q  12 ggttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagatt 84  Q
    |||||||||||||||||||| |||||||||||| |||||  |||||  |||||||||||| | |||||||||||    
T  34459195 ggttaatatgtctttacccccctgtaatttgggcgagtttcggtttttcccctgtaaaaaaataagtttagatt 34459268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 11652531 - 11652456
Alignment:
Q  14 ttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||| || | ||||||||| |||||| |||||||| |||||||||| ||||  |||||||||||||    
T  11652531 ttaatatgtctttactcc-tataatttgggcgagttccggtttaccgcctgtaaaaaaaaaaaattagattccaacc 11652456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 26906536 - 26906460
Alignment:
Q  11 gggttaatatgtcttta-ccccctgtaatttgggtgagttctggtttaccccctgt-aaaaataaaagtttagattc 85  Q
    ||||||||||||||||| |||||||||||||||| |||||| | ||| ||| |||| ||||| ||||||||||||||    
T  26906536 gggttaatatgtctttatccccctgtaatttgggcgagttccgattttccctctgtaaaaaaaaaaagtttagattc 26906460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 34461199 - 34461123
Alignment:
Q  11 gggttaatatgtctttaccc-cctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattc 85  Q
    |||||||||||||||||||  ||||||||||||| |||||| ||||| ||||| |||||||| | ||||||||||||    
T  34461199 gggttaatatgtctttaccttcctgtaatttgggcgagttccggttttcccccctgtaaaaaaataagtttagattc 34461123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 36709208 - 36709259
Alignment:
Q  20 tgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaa 70  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  36709208 tgtctttacccccctgtaatttgggtgagttccgatttaccccctgtaaaaa 36709259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 23371448 - 23371509
Alignment:
Q  10 tgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaat 71  Q
    |||||||||| |||||||||||||||||| | ||| | || |||||| ||||||||||||||    
T  23371448 tgggttaataggtctttaccccctgtaatataggtcatttatggttttccccctgtaaaaat 23371509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 11847141 - 11847077
Alignment:
Q  28 ccccctgtaatttgggtgagttctggtttac-cccctgt-aaaaataaaagtttagattccaacc 90  Q
    ||||||||||||| || |||||| ||||||| ||||||| ||||| |||||||||||||||||||    
T  11847141 ccccctgtaatttaggcgagttccggtttacccccctgtaaaaaaaaaaagtttagattccaacc 11847077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 23784584 - 23784644
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaat 71  Q
    ||||||||| |||||||||||||||||| | ||| | | ||||||| ||||||||||||||    
T  23784584 gggttaataggtctttaccccctgtaatataggtcattactggttttccccctgtaaaaat 23784644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 1853461 - 1853366
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    |||||||||| | ||||||||||||||| |  |||| || ||||||||| | |||||||| |   ||||||||||||||| | |||| ||||||||    
T  1853461 gggttaatatatgtttaccccctgtaatattagtgatttttggtttacctcatgtaaaaaaatttgtttagattccaaccttgtaatttgaagatt 1853366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 26905200 - 26905273
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattcc 86  Q
    |||||||||||||||||| || ||||||||| | || ||||| |||||||| | |||||| |||||||||||||||    
T  26905200 gggttaatatgtctttacacc-tgtaatttgagcgaattctgatttacccc-tataaaaaaaaaagtttagattcc 26905273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 42957723 - 42957664
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaa 70  Q
    |||||||||| | ||||||||||||||| |  |||| ||| |||||||||||||||||||    
T  42957723 gggttaatatatgtttaccccctgtaatattagtgaattccggtttaccccctgtaaaaa 42957664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 29675703 - 29675637
Alignment:
Q  11 gggttaatatgtctttaccc-cctgtaatttgggtgagttctggtttac-cccctgtaaaaataaaa 75  Q
    |||||||||||| ||||||| ||||||||||||| || ||||||||| | |||||||||||| ||||    
T  29675703 gggttaatatgtttttaccctcctgtaatttgggcgaattctggttttctcccctgtaaaaaaaaaa 29675637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 3092548 - 3092495
Alignment:
Q  53 gtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    |||||||||||||||||| ||  ||||||||||||||| | |||| ||||||||    
T  3092548 gtttaccccctgtaaaaagaattgtttagattccaaccctgtaatttgaagatt 3092495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 35913341 - 35913280
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttac-cccctgtaaaaat 71  Q
    ||||||||| |||||||||||||||||| | | | | ||||||||||| |||||||||||||    
T  35913341 gggttaataggtctttaccccctgtaatatagatcatttctggtttacacccctgtaaaaat 35913280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 38193253 - 38193192
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttac-cccctgtaaaa 69  Q
    ||||||||||| |||||||||||||||||| | ||| | ||||||||| | |||||||||||    
T  38193253 ttgggttaataggtctttaccccctgtaatataggtcatttctggttttctcccctgtaaaa 38193192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 5766637 - 5766665
Alignment:
Q  10 tgggttaatatgtctttaccccctgtaat 38  Q
    |||||||||||||||||||||||||||||    
T  5766637 tgggttaatatgtctttaccccctgtaat 5766665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 35359345 - 35359266
Alignment:
Q  14 ttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaag--tttagattccaacc 90  Q
    ||||||||| ||||||||   |||||| || |||||| |||||| ||||||||||||| |||||  ||||||||||||||    
T  35359345 ttaatatgtatttacccctcttaatttaggcgagttccggtttatccccctgtaaaaacaaaagagtttagattccaacc 35359266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 2405106 - 2404909
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattc 107  Q
    |||||||||||||||||||||| ||||||||| || |||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  2405106 ttgggttaatatgtctttaccctctgtaatttaggcgagttccggtttacccccctgtaaaaataaaagtttagattccaaccttataatatgaagattc 2405007  T
Q  108 ttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2405006 ttcacaaaacacctctataatattaagattctccacaaaacatccctgaccccatccagacgctgatgtggcatgccactgtgtaattattttaattt 2404909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 19634502 - 19634697
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||| |||||||| ||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  19634502 gggttaatatgtttttacccccctgtaatttaggcgagtttcggtttaccccctgtaaaaataaaagtttagattccaactctataataagaagattctt 19634601  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  19634602 cacaaaacacccctataatattaagattctccacaaaatacccctcaccccatccagacgttgatgtggcacgccactgtgtaattattttaattt 19634697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 17184630 - 17184427
Alignment:
Q  1 attagatgttgggttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatat 99  Q
    |||| |||| |||||||||||| |||||||  | |||||||||| ||| || ||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  17184630 attaaatgtagggttaatatgtttttacccttcggtaatttgggcgaggtccggtttaccccc-gtaaaaataaaagtttagatttcaaccctataatat 17184532  T
Q  100 gaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||    
T  17184531 gaagattcttcacaaaacacccctataatattaagattctccacaaaacacctctg-ccccatccagacgctgatgtggcacgccactgtgtaattattt 17184433  T
Q  200 taattt 205  Q
    | ||||    
T  17184432 tcattt 17184427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 28189308 - 28189112
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||| ||||||||| ||||||||||| ||||||  |||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||    
T  28189308 gggttaatatgtttttacccccctgtaatttgggcgagttccagtttacccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 28189209  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  28189208 ccacaaaacacccctgtaatatgaagattctccacaaaacaccactgaccccatccagacgctgatgtggcacgccactgtgtaattactttaattt 28189112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 34492473 - 34492279
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa-gtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||| ||||| |||||||||||||| |||||| | ||||||||||||||||| |||| ||||||||| ||||| |||||||| ||||||||     
T  34492473 gggttaatatgtttttactccctgtaatttgggcgagttccgatttaccccctgtaaaaaaaaaaagtttagatttcaaccctataatataaagattctc 34492374  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  34492373 cacaaaacacccctataatatgaagattctccacaaaaca-tcctgaccccatccagacgctgatgtggcacgccactgtgtaattactttaattt 34492279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 5756452 - 5756260
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttca 111  Q
    |||||||||||||||||| |  ||||| |||| |||||| | |||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  5756452 ggttaatatgtctttaccacg-gtaatgtgggcgagttccgatttacctcctgtaaaaataaaagtttagatttcaatcctataatatgaagattcttca 5756354  T
Q  112 caaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||||||||||||||||||||||||| |  |||| |||| ||||||||||||||||| ||| |  |||||||||||| ||||    
T  5756353 caaaacacccctataatattaagattctccacaaaacatctttgaccccattcagacgctgatgtggcacgccgccatgtaattatttttattt 5756260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 18325541 - 18325703
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||| |||||||| |||||||||||||| |||| ||||||||||||||||| |    
T  18325541 gggttaatatgtctttaccccctgtaatttgggcgagtttcggtttaccccatgtaaaaaaaaaagtttagattcgaaccctataatatgaagattctcc 18325640  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctga 173  Q
    ||||||||  |||||||||| |||||||||||||||||||| || || || ||||||||||||    
T  18325641 acaaaacatacctataatatgaagattctccacaaaacacctcttaccccttccagacgctga 18325703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 32 - 205
Target Start/End: Original strand, 28743659 - 28743832
Alignment:
Q  32 ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaacacccctataatatt 131  Q
    |||||||||||| |||||| |||||| ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  28743659 ctgtaatttgggcgagttccggtttatcccctgtaaaaataaaagtgtagatttcaaccctataatacgaagattctccacaaaacacctctataatatt 28743758  T
Q  132 aagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||| |||||||||||  ||||  |||||||||||||| |||||| |||  |||||||||||||||||||    
T  28743759 aagattctacacaaaacacctttgacctcatccagacgctgacgtggcacgcctttgtgtaattattttaattt 28743832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 28564308 - 28564157
Alignment:
Q  54 tttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccc 153  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||| |||||||||||| | |||||| |||||| |||||||||||||||    
T  28564308 tttaccccctgtaaaaaaaaaagtttagatttcaaccctataatataaagattctccacaaaacacccatgtaatatgaagattttccacaaaacacccc 28564209  T
Q  154 tgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||| |||||||||||||||||||| | |||||||||||||||| |||||||    
T  28564208 tgaccccatccagacgctgatgtggtacgccactgtgtaattatattaattt 28564157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 45 - 205
Target Start/End: Complemental strand, 16841100 - 16840939
Alignment:
Q  45 gagttctggtttaccccctgtaaaaa--taaaagtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctcca 142  Q
    ||||||||||||||||| ||||||||  ||||||||| ||||  |||| |||||||| |||||||| |||||||||||||| |||||| ||||| |||||    
T  16841100 gagttctggtttacccc-tgtaaaaaaataaaagtttcgattttaaccttataatataaagattctccacaaaacacccctgtaatatgaagatcctcca 16841002  T
Q  143 caaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16841001 caaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 16840939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 3587012 - 3587197
Alignment:
Q  17 atatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaa 116  Q
    ||||||||||||||| |||||||||| ||||||   ||||||||||| ||||||  |||||||||||| | ||| |||||||| |||||||| | |||||    
T  3587012 atatgtctttacccc-tgtaatttggttgagtttcagtttaccccctctaaaaa--aaagtttagatttcgaccctataatatcaagattctcctcaaaa 3587108  T
Q  117 cacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    || |||| |||||| |||||||||||||||||||| |||||  |||||||||||||| |||||| ||||||||||||||||||||||||    
T  3587109 catccctgtaatataaagattctccacaaaacacctctgacctcatccagacgctgacgtggcacgccactgtgtaattattttaattt 3587197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 17139767 - 17139875
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||| ||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |    
T  17139767 gggttaacatgtctttacccc-tgtaatttgggcgagttccggtttaccccctgtaaaaaaaaaagtttagattccaacc-cataatatgaagattctcc 17139864  T
Q  111 acaaaacaccc 121  Q
    |||||||||||    
T  17139865 acaaaacaccc 17139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 29057438 - 29057356
Alignment:
Q  120 ccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaat 203  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| |||||    
T  29057438 ccctataatattaagattctccacaaaacacccctgact-catccagacgctgacgtggcacgccactgtgtaattatattaat 29057356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 17183323 - 17183398
Alignment:
Q  14 ttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||| ||||||||||||||||| || |||||| | ||||||||||||||||| |||||||||||||||||||    
T  17183323 ttaatatgtatttaccccctgtaatttaggcgagttccgatttaccccctgtaaaaa-aaaagtttagattccaacc 17183398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 28188110 - 28188192
Alignment:
Q  9 ttgggttaatatgtctttacccc-ctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  28188110 ttgggttaatatgtttttacccccctgtaatttgggcgagttctggttttcccccctgtaaaaa-aaaagtttagattccaacc 28188192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 20400141 - 20400216
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagatt 84  Q
    |||||||||||||||||||||| ||||||||||| |||||  |||||| ||||||||||||| |||||||||||||    
T  20400141 gggttaatatgtctttacccccttgtaatttgggcgagtttcggtttacccccctgtaaaaaaaaaagtttagatt 20400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 29057502 - 29057404
Alignment:
Q  24 tttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaacacccct 123  Q
    |||||| ||||||||||||  |||||| |||||||| | |||||||| || | |||||||| ||||| |||||||| |||||||| ||||||||||||||    
T  29057502 tttacctcctgtaatttggacgagttccggtttacctc-tgtaaaaaaaataatttagatttcaaccctataatattaagattctccacaaaacacccct 29057404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 24672559 - 24672673
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||| |||||||| |||||||||||| ||||||||| ||| ||||||||||||| |   ||||||||||   || | |||||||||||||||    
T  24672559 gggttaatatgtttttacccccctgtaatttgggcgagttctggttttcccccctgtaaaaaaattcgtttagattctgtccctgtaatatgaagattct 24672658  T
Q  109 tcacaaaacacccct 123  Q
    |   |||||||||||    
T  24672659 ttcgaaaacacccct 24672673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 28562775 - 28562855
Alignment:
Q  11 gggttaatatgtctttaccc-cctgtaatttgggtgagttctggtttaccccctgt-aaaaataaaagtttagattccaacc 90  Q
    |||||||||||| |||| || ||||||||||||| |||||||||||| |||||||| ||||| |||||||||||| ||||||    
T  28562775 gggttaatatgtttttatccacctgtaatttgggcgagttctggttt-ccccctgtaaaaaaaaaaagtttagataccaacc 28562855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 2403674 - 2403753
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| |||||||| ||||||||| || |||||| |||||||||||  || ||| |||||||||||||||||||    
T  2403674 gggttaatatgtatttacccccctgtaatttaggcgagttccggtttaccccc-ctataaaaaaaagtttagattccaacc 2403753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 29056776 - 29056866
Alignment:
Q  13 gttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||| ||  ||||||||||  |||||||||||||||||   | |||| ||||||||||||||||||||| ||| || |||||||||    
T  29056776 gttaatatgtctttatcc--tgtaatttggacgagttctggtttacccc---tgaaaaaaaaagtttagattccaaccatgtaaaat-aagattctt 29056866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 33198525 - 33198623
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||| | |||||||||||||||||  | || ||| |||||||  |||||||||| ||   ||||||||||| || |||||| |||||||||||    
T  33198525 gggttaatatctgtttaccccctgtaattttagcgatttccggtttacttcctgtaaaaaaaattatttagattccatccctataatttgaagattctt 33198623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 34491151 - 34491235
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctggttt--accccctgtaaaaataaaa--gtttagattccaacc 90  Q
    |||||||||||| |||||||| |||||||||||| ||||| ||||||   ||||||||||||| ||||  |||||||||||||||    
T  34491151 gggttaatatgtttttacccccctgtaatttgggcgagttttggttttccccccctgtaaaaaaaaaaaggtttagattccaacc 34491235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 995853 - 995966
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    |||||||||||| |||||| | ||||||||||| || |||  ||||| | |||||||||| |   ||||| ||||||||| |  || ||||||||||| |    
T  995853 gggttaatatgtatttacctcttgtaatttgggcgaattccagtttatctcctgtaaaaaaatttgtttaaattccaaccttgaaaaatgaagattctcc 995952  T
Q  111 acaaaacaccccta 124  Q
    |||| |||||||||    
T  995953 acaacacaccccta 995966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 3816782 - 3816721
Alignment:
Q  48 ttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||| ||  ||||||||| ||||| | |||| |||||||||||    
T  3816782 ttctggtttaccccctgtaaaaaaaattgtttagatttcaaccctgtaatttgaagattctt 3816721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 14328705 - 14328628
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattc 85  Q
    ||||||||||| |||||||||||||||||| | ||| | || ||| ||| ||||||||||||| |||| |||||||||    
T  14328705 ttgggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaactttagattc 14328628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 14421715 - 14421638
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattc 85  Q
    ||||||||||| |||||||||||||||||| | ||| | || ||| ||| ||||||||||||| |||| |||||||||    
T  14421715 ttgggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaactttagattc 14421638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 17139847 - 17139926
Alignment:
Q  124 ataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||| |||||||||||||||||| |||||| |||||||||| | ||| ||||||  | | |||||||||||||||||||    
T  17139847 ataatatgaagattctccacaaaaca-ccctga-tccatccagatgttgacgtggcacccaaatgtgtaattattttaattt 17139926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 29942500 - 29942444
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaa 67  Q
    ||||||||| |||||||||||||||||| | ||| | ||||||||| ||||||||||    
T  29942500 gggttaataggtctttaccccctgtaatataggtcatttctggttttccccctgtaa 29942444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 18867306 - 18867228
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||| ||||||||||||||||||| |  |||||  ||||||||| || |||||| |||  ||||||||||||||    
T  18867306 gggttaatatatctttaccccctgtaatttagacgagtttcggtttacccgctataaaaa-aaatatttagattccaacc 18867228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 19635913 - 19635831
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacc-ccctgtaaa--aataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||| ||||||||| || |||||  |||||||| |||||||||  || ||||||||| |||||||||    
T  19635913 gggttaatatgtatttaccctctgtaatttaggcgagtttcggtttacctccctgtaaaagaaaaaaagtttaaattccaacc 19635831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 10344049 - 10344102
Alignment:
Q  10 tgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccct 63  Q
    |||||||||| |||||||||||||||||| | ||| | ||||||||| ||||||    
T  10344049 tgggttaataggtctttaccccctgtaatataggtcatttctggttttccccct 10344102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 19325614 - 19325671
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    |||||||| |||||||||||||||||||| | | | ||| ||||| ||||||||||||    
T  19325614 ggttaataggtctttaccccctgtaatttagatcatttccggttttccccctgtaaaa 19325671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 17141256 - 17141192
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa 75  Q
    |||||||||||||| ||||||||||||||| |  |||||| |||||| ||  |||||||| ||||    
T  17141256 gggttaatatgtctataccccctgtaatttagtcgagttccggtttaacctttgtaaaaaaaaaa 17141192  T

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Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 23494348 - 23494544
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  23494348 ttgggttaatatgtctttaccccctgtaatttgggcgagtttcggtttacctcctgtaaaaataaaagtttagattccaaccctttaatatgaagattct 23494447  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||    
T  23494448 tcaaaaaacacccctataatattaagattctccacaaaacacccctgaccccatccagacgctgatgtggcacgccattgtgtaattattttaattt 23494544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 26165877 - 26166071
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||||||| ||||||||| |||||| | |||||| |||||||||||||| ||||||||||||| | ||||||||||| |||||||    
T  26165877 gggttaatatgtctttaccccctataatttgggcgagttccgatttacctcctgtaaaaataaatgtttagattccaatcctataatatgaacattcttc 26165976  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  26165977 acaaaacacccctataatattaagattctccacaaaacacctctgaccccatccagacgatgatgtggcacgccactgtgtaattattttaattt 26166071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 18321010 - 18320814
Alignment:
Q  11 gggttaatatgtctttac-cccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||| |||||| |||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  18321010 gggttaatatgtctttactcccctgcaatttgggcgagttccggtttaaccccctgtaaaaataaaagtttagattccaaccctataatataaaaattct 18320911  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  18320910 tcacaaaacacccctatgatattaagattctccacaaaacacctctgaccccatccagacgctgatgtggcacgccactgtgtaattattttaattt 18320814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 28040036 - 28039844
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||| |    
T  28040036 gggttaatatgtctttaccccctgtaatttgggcgagttccggttttccccctgtaaaaa-aaaagtttagattccaaccctataatataaagattctcc 28039938  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  28039937 acaaaacacccctgtaatatgaagattctccacaaaacacccctgac-ccattcagacgctgatgtggcacgccactgtgtaattattttaattt 28039844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 24170599 - 24170794
Alignment:
Q  12 ggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||| ||||||||| ||||||||||| |||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||     
T  24170599 ggttaatatgtttttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 24170698  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  24170699 cacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccatccagacgctgatgtggcacgccactgtgtaattattttaattt 24170794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 49116400 - 49116593
Alignment:
Q  20 tgtctttaccccctgtaatttgggtgagttctggtttac-cccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaaca 118  Q
    ||||||||||||||||||||| || |||||| ||||||| |||||||||||| ||||||||||||| | ||| ||||||||||||||||| |||||||||    
T  49116400 tgtctttaccccctgtaatttaggcgagttccggtttacacccctgtaaaaaaaaaagtttagattac-accctataatatgaagattctccacaaaaca 49116498  T
Q  119 ccccta--------taatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||        |||||| ||||||||||||||||||||||||    ||| |||| | ||| |||||| | |||| |||||||||||||||||    
T  49116499 tccctacatccatgtaatatgaagattctccacaaaacacccctggtctcattcagaggttgacgtggcacgtcactatgtaattattttaattt 49116593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 5117364 - 5117443
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||    
T  5117364 gggttaatatgtctttaccccctgtaatttgggtgagttccagtttacccccttgtaaaaa-aaaagtttagattccaacc 5117443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 26167280 - 26167202
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||||||||||| || || ||| ||||||||||||||||||| |||||||||||||||||||    
T  26167280 gggttaatatgtctttaccccctgtaatttaggcgaattccggtttaccccctgtaaaaa-aaaagtttagattccaacc 26167202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 5117789 - 5117887
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||||||||||||||| || |||||| ||||||| | ||||||||| | ||||||||||| ||||| | |||| |||||||||||    
T  5117789 gggttaatatgtctttaccccctgtaatttaggcgagttccggtttactctctgtaaaaaaataagtttagatttcaaccttgtaatttgaagattctt 5117887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 5118858 - 5118779
Alignment:
Q  11 gggttaatatgtctttaccc-cctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  5118858 gggttaatatgtttttaccctcctgtaatttaggtgagttccggtttaccccctgtaaaaa-aaaagtttagattccaacc 5118779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 38601337 - 38601417
Alignment:
Q  11 gggttaatatgtctttac-cccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||| ||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||||||||    
T  38601337 gggttaatatgtctttacacccctataatttcgacgagttccggtttaccccctgtaaaaataaaagtttagattccaacc 38601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 39274666 - 39274586
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||  |||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||||    
T  39274666 gggttaatatgtctttagtccctgtaatttgggcgagttccggtttacccctctgtaaaaaaaaaagtttagattccaacc 39274586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 24171847 - 24171764
Alignment:
Q  9 ttgggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||    
T  24171847 ttgggttaatatgtttttacccccctgtaatttgggcgagttctggttttcccccctgtaaaaaaaaaagtttagattccaacc 24171764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 49116891 - 49116811
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgta--aaaataaaagtttagattccaac 89  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||||||||  |||| |||| |||||||||||||    
T  49116891 gggttaatatgtctttaccccctgtaatttgagcgagttccggtttaccccctgtaaaaaaaaaaaaatttagattccaac 49116811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 38602647 - 38602541
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||| ||||||||||| |||||||| || |||||| | |||||||||| ||||||  |||||||||||||||| | ||||||| ||||||||| |    
T  38602647 gggttaata-gtctttacccc-tgtaatttaggcgagttccgatttaccccctctaaaaa--aaagtttagattccaatcttataatacgaagattctcc 38602552  T
Q  111 acaaaacaccc 121  Q
    |||||||||||    
T  38602551 acaaaacaccc 38602541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 23495797 - 23495720
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||| ||||||||||||||||| || |||||  ||||||||||||||||||| ||||| |||||||||||||    
T  23495797 ggttaatatgtatttaccccctgtaatttaggcgagtttcggtttaccccctgtaaaaa-aaaagattagattccaacc 23495720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 7104544 - 7104623
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||| ||||||||||||||| |||||| || |||||||||||||||| || | |||||||| |||||    
T  7104544 ttgggttaatatgtcttta-cccctgtaatttgggcgagttccgg-ttaccccctgtaaaaaaaataatttagatttcaacc 7104623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 27988345 - 27988422
Alignment:
Q  14 ttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||  ||| |||||||||| ||||||| | ||||||||||||||||| |||| ||||||||||||||    
T  27988345 ttaatatgtctttattcccatgtaatttggatgagttccgatttaccccctgtaaaaaaaaaaatttagattccaacc 27988422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 28038786 - 28038864
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacc-ccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||| ||||||||||||||| |||||  ||||| || ||||||||||| |||||||||||||||||||    
T  28038786 gggttaatatgtcttta-cccctgtaatttgggcgagtttcggttttcctccctgtaaaaa-aaaagtttagattccaacc 28038864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 21959937 - 21959992
Alignment:
Q  150 cccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||| | ||||||||||||| |||||| ||||||||||||||||||||||||    
T  21959937 cccctgacccaatccagacgctgacgtggcacgccactgtgtaattattttaattt 21959992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 50563945 - 50564042
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||| |||||||||| || |||||| ||||  || | ||||| || ||||||||||||| ||| | |||||| |||||||||||    
T  50563945 gggttaatatgtctttaccacctgtaatttaggcgagttccggttaccctcatgtaacaaaaaaagtttagatt-caaacttataatttgaagattctt 50564042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 7104723 - 7104642
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctgg-tttaccccctgt-aaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||| |||||||||||||   ||||| || ||| |||||||| ||||| |||||||||||||||||||    
T  7104723 gggttaatatgtctttacaccctgtaatttggacaagttccggttttcccccctgtaaaaaaaaaaagtttagattccaacc 7104642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 27989372 - 27989272
Alignment:
Q  11 gggttaatatgtctttaccccct-gtaatttgggtgagttctggtttaccccctgtaaaaataaaa-gtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||| |||||| ||| |||||||  | |||||||||| |||||| |||||||| |||| ||||||||| ||||| | |||| ||||||||||    
T  27989372 gggttaatatgtttttacctccttgtaatttaagcgagttctggtctaccccatgtaaaaaaaaaaagtttagatttcaaccttgtaatttgaagattct 27989273  T
Q  109 t 109  Q
    |    
T  27989272 t 27989272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 7308334 - 7308276
Alignment:
Q  48 ttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    ||||||||||||||||||||||| ||  ||| ||||||||||| |||||| ||||||||    
T  7308334 ttctggtttaccccctgtaaaaaaaattgttcagattccaaccctataatttgaagatt 7308276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 55257658 - 55257736
Alignment:
Q  28 ccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    ||||||||||| |  | || ||| ||||||||||||||||||| ||  ||||||||||||||| |||||| ||||||||    
T  55257658 ccccctgtaatattagcgatttccggtttaccccctgtaaaaaaaattgtttagattccaaccctataatttgaagatt 55257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 46565260 - 46565335
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| |||||||| | |||||||||||||||| | |||| |||||||||||| |||   |||||||||||||    
T  46565260 gggttaatatgtttttaccccttataatttgggtgagttccgattta-cccctgtaaaaaaaaa---ttagattccaacc 46565335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 39747229 - 39747155
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagatt 84  Q
    |||||||||||| | |||||||| ||||||||||| ||||||||||||| | |||||||||||  ||||||||||||    
T  39747229 ttgggttaatatatttttacccc-tgtaatttgggcgagttctggtttatctccctgtaaaaa-caaagtttagatt 39747155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 27760289 - 27760347
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||||| |||||||||||||||||| | ||| | ||||||||| |||| |||||||    
T  27760289 gggttaataagtctttaccccctgtaatataggtcatttctggttttccccttgtaaaa 27760347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 8355626 - 8355565
Alignment:
Q  9 ttgggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||||||| |||||||||||| |||||| | ||| | ||||||||| ||||||||||||    
T  8355626 ttgggttaataggtctttacccccctgtaatataggtcatttctggttttccccctgtaaaa 8355565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 39273663 - 39273744
Alignment:
Q  10 tgggttaatatgtctttac-cccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||| ||||  ||||||||||||||| || |||  ||||||| |||||||||| |  |||||||||| |||||    
T  39273663 tgggttaatatgtttttagtcccctgtaatttgggcgaattccagtttacctcctgtaaaaaaatcagtttagatttcaacc 39273744  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 49873006 - 49872949
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaa 68  Q
    ||||||||| |||||||||||||||||| | ||| | ||| ||||| |||||||||||    
T  49873006 gggttaataggtctttaccccctgtaatataggtcatttccggttttccccctgtaaa 49872949  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 49116362 - 49116417
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaa 67  Q
    ||||||||||||||||||| |||||||||| || ||||| |  ||||||||||||||    
T  49116362 gggttaatatgtctttacctcctgtaatttaggcgagttgt-ctttaccccctgtaa 49116417  T

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Target: scaffold0862 (Bit Score: 156; Significance: 4e-83; HSPs: 2)
Name: scaffold0862
Description:

Target: scaffold0862; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 684 - 879
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctg-taaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  684 gggttaatatgtctttacctcttgtaatttgggtgagttccggtttaccccccggtaaaaataaaagtttagattccaaccatataatatgaagattctt 783  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  784 cacaaaacaccactataatattaagattctccacaaaacacctctgaccccatccagacgctgatgtggcataccactgtgtaattattttaattt 879  T

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Target: scaffold0862; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 2206 - 2127
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||||||||||| |  |||||| ||||| |||||||| |||| |||||||||||||||||||    
T  2206 gggttaatatgtatttaccccctgtaatttagaagagttccggtttgccccctgttaaaaaaaaagtttagattccaacc 2127  T

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Target: chr1 (Bit Score: 154; Significance: 7e-82; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 50962726 - 50962537
Alignment:
Q  17 atatgtctttaccccctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaa 115  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50962726 atatgtctttaccccctgtaatttgggcgagatccggtttacccccctgtaaaaataaaagtttagattccaaccctataatatgaagattcttcacaaa 50962627  T
Q  116 acacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  50962626 acacccctataatattaagattctccacaaaacacccctgaccccatccagacgctgatgtggcacaccactgtgtaattattttaattt 50962537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 27902953 - 27903149
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| | ||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  27902953 gggttaatatgtctttacccccctttaatttgggcgagttccggtttacccccctgtaaaaataaaagtttagattccaaccctataatatgaagattct 27903052  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  27903053 tcacaaaacacccctataatattaagattctccacaaaacacccctgatcccatccagacgttgatgtggcacaccactgtgtaattattttaattt 27903149  T

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Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 36632313 - 36632121
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||||  ||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  36632313 gggttaatatgtctttaccc--tgtaatttgggcgagttccggtttactccctataaaaataaaagtttagattccaaccatataacatgaagattcttc 36632216  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  36632215 acaaaacacccctataatattaagattttccacaaaacacttctgaccccatccagactctgatgtggcacgccactgtgtaattattttaattt 36632121  T

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Target: chr1; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 49762585 - 49762780
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||     
T  49762585 gggttaatatgtctttaccccctgtaatttgggcgagttccggttttccccgctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 49762684  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  49762685 cacaaaacacccctgtaatatgaagattcttcacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 49762780  T

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Target: chr1; HSP #5
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 10374134 - 10374329
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc--ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||| |||||||||||| ||| | |||||||||||||||||    
T  10374134 gggttaatatgtctttaacccctgtaatttgggcgagttctggtttaccccccctgtaaaaatgaaagtttagatttcaatcctataatatgaagattct 10374233  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||  ||||||||||||||||| |||||    
T  10374234 tcacaaaacacccctataatattaagattctccacaaaacactcatgaccccatccagacgctgatgtggca-cccactgtgtaattatttaaattt 10374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 10 - 205
Target Start/End: Original strand, 16829853 - 16830050
Alignment:
Q  10 tgggttaatatgtctttacc-ccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattc 107  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||||| |||||||    
T  16829853 tgggttaatatgtctttacctccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattc 16829952  T
Q  108 ttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    | |||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16829953 tccacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 16830050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 48642062 - 48642254
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttca 111  Q
    |||||||||||||||||||| |||||||||   |||||  |||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||    
T  48642062 ggttaatatgtctttacccc-tgtaatttgatcgagtttcggtttaccccctataaaaataaaagtttagattccaaccctataatataaagattcttca 48642160  T
Q  112 caaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  48642161 aaaaacacccctataatattaagattctccacaaaatacctctgaccccatccagacgctgatgtggcacgccactgtgtaattattttaattt 48642254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 20159222 - 20159416
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||| ||||||||     
T  20159222 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttccccctgtaaaaa-aaaagtttagattccaaccctataatataaagattctc 20159320  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  20159321 cacaaaacacccctgtaatatgaagattttccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 20159416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 46625849 - 46625653
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||| | ||| ||||| |||||||| ||||||||||||||||||| |||||||| ||||||||    
T  46625849 gggttaatatgtctttacccccctgtaatttgggcgagttccgattttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 46625750  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  46625749 ccacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatatggcacgccactgtgtaattattttaattt 46625653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 22059847 - 22059655
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |    
T  22059847 gggttaatatgtctttaccccctgtaatttgggtgagttccgatttaccccctgtaaaaa-aaaagtttagattccaaccctataatatgaagattctcc 22059749  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||  ||||| ||||||||||| |||||||||||||| |||| ||||| || | ||||||  |||||||||||||||||||||||    
T  22059748 acaaaacacccctgcaatatgaagattctccagaaaacacccctgaccccat-cagacactaacgtggcacaccactgtgtaattattttaattt 22059655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 7378495 - 7378301
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||| ||||||||| | ||||||||  ||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||||     
T  7378495 gggttaatatgtatttacccccctctaatttggacgagttctggtttacccc-tgtaaaaaaaaaagtttagatttcaaccctataatatgaagattctc 7378397  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||| |||||||| |||||| |||||| ||||||||||||||||||||||||    
T  7378396 cacaaaacacctctgtaaaatgaagattctccacaaaacacccctgaccccatccagccgctgacgtggcacgccactgtgtaattattttaattt 7378301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 32975645 - 32975778
Alignment:
Q  72 aaaagtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgct 171  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||| | |||||| |||||||||||| ||||||| |||||  ||||||||||||    
T  32975645 aaaagtttagatttcaaccttataatatgaagattctccacaaaacacccatgtaatatgaagattctccactaaacacctctgacctcatccagacgct 32975744  T
Q  172 gatgtggcatgccactgtgtaattattttaattt 205  Q
    || ||||   |||| |||||||||||||||||||    
T  32975745 gacgtggtgcgccattgtgtaattattttaattt 32975778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 50961356 - 50961435
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||||||||| |||||||||||||||||||    
T  50961356 gggttaatatgtatttaccccctgtaatttaggggagttccggtttaccccctgtaaaaaaaaaagtttagattccaacc 50961435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 27362208 - 27362112
Alignment:
Q  10 tgggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaaga 104  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| ||||||||||||||||||| |||||||| ||||    
T  27362208 tgggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaaga 27362112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 17864837 - 17864948
Alignment:
Q  11 gggttaatatgtctttac-cccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||   ||||||||||||||| || || |||||||||||    
T  17864837 gggttaatatgtctttacacccctgtaatttgggcgagttctggtttaccccgttgtaaaaatatttgtttagattccaaccttaaaaaatgaagattct 17864936  T
Q  109 tcacaaaacacc 120  Q
     || ||||||||    
T  17864937 ccaaaaaacacc 17864948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 45459212 - 45459326
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttac-cccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||||||||| ||  |||||| ||||||| ||||| |||||| ||  ||||||||||||||| |  || |||||||||||     
T  45459212 gggttaatatgtctttaccccctgtaattgggacgagttccggtttacacccctttaaaaaaaattgtttagattccaaccttgaaaaatgaagattctc 45459311  T
Q  110 cacaaaacaccccta 124  Q
    |||||||||||||||    
T  45459312 cacaaaacaccccta 45459326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 48643396 - 48643316
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgta-aaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||||||||||| |||| |||||||||||||||||||    
T  48643396 gggttaatatgtatttaccccctgtaatttaggcgagttccggtttaccccctgtaaaaaaaaaaagtttagattccaacc 48643316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 27904335 - 27904237
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||| ||||||||| |||||||| ||||||||| | ||||||||||||||||| ||||||||| ||||||||| ||||| || |||||||||    
T  27904335 gggttaatatgtatttacccccctgtaatttaggtgagttccgatttaccccctgtaaaaaaaaaagtttaaattccaaccctataaaat-aagattctt 27904237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 38174065 - 38174160
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||  ||||||||||||| ||||| ||||| || |||||||||    
T  38174065 gggttaatatgtctttacctcctgtaacttgggcgagttccggtttaccccctgtaaaa--aaaagtttagatttcaaccctataaaat-aagattctt 38174160  T

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Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 9774962 - 9775041
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||| ||  |||||||||||||||||||    
T  9774962 ttggattagtatgtctttaccccctgtaatttgggtgagttccggtttacctcctgtacaa--aaaagtttagattccaacc 9775041  T

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Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 49664430 - 49664356
Alignment:
Q  16 aatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||| |||| ||||||||||||||||||||||  |||||||| || ||||||||||||||||||||||||||    
T  49664430 aatatgtatttatcccctgtaatttgggtgagttccagtttaccctctataaaaataaaagtttagattccaacc 49664356  T

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Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 49763760 - 49763678
Alignment:
Q  10 tgggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  49763760 tgggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 49763678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 16831111 - 16831030
Alignment:
Q  11 gggttaatatgtctttaccccct-gtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  16831111 gggttaatatgtctttacccccttgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 16831030  T

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Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 20160477 - 20160396
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  20160477 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 20160396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 17865734 - 17865623
Alignment:
Q  11 gggttaatatgtctttac-cccctgtaatttgggtgagttctggtttaccccctgtaaaaataaa-agtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||| |||  |||||||||| |||| |  || || ||||||||    
T  17865734 gggttaatatgtatttactcccctgtaatttgggcgagttccggtttaccccctgtaaaaaaaaattgtttagattctaaccttgaaaaataaagattct 17865635  T
Q  109 tcacaaaacacc 120  Q
     |||||||||||    
T  17865634 ccacaaaacacc 17865623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 27361382 - 27361465
Alignment:
Q  9 ttgggttaatatgtctttac-cccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||| ||||||||||||||| |||||| | ||| |||| ||||||||| |||||||||||||||||||    
T  27361382 ttgggttaatatgtctttactcccctgtaatttgggcgagttccgattttcccccctgtaaaaaaaaaagtttagattccaacc 27361465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 38132722 - 38132610
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||  ||||  |||||| |||||||||||||||  || |  |||||||||||||||    
T  38132722 gggttaatatgtctttaccccctgtaatttgggcgagttccggtttattccccaataaaaa-aaaagtttagattccgtccctgaaatatgaagattctt 38132624  T
Q  110 cacaaaacacccct 123  Q
       |||||||||||    
T  38132623 tcgaaaacacccct 38132610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 22058697 - 22058761
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa 75  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||| |||||||| ||||    
T  22058697 gggttaatatgtctttaccccctgtaatttgggcgagtttcggtttaccccttgtaaaaaaaaaa 22058761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 49663431 - 49663531
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||| ||||||||  ||||| ||| || ||||||   |||||| ||||||||||||||||||||| |||||||| | |||| ||||||||||    
T  49663431 ttgggttaatatatctttaccttctgtactttaggcgagttccaatttacctcctgtaaaaataaaagtttagcttccaaccttttaatttgaagattct 49663530  T
Q  109 t 109  Q
    |    
T  49663531 t 49663531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 6668364 - 6668283
Alignment:
Q  11 gggttaatatgtctttaccc-cctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||| || ||||||||||||| |||||| ||||||||||| |||||||| ||||  |||||||||||||    
T  6668364 gggttaatatgtctttagccacctgtaatttgggcgagttccggtttacccccttgtaaaaaaaaaaacttagattccaacc 6668283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 7377353 - 7377453
Alignment:
Q  9 ttgggttaatatgtcttt-accccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattc 107  Q
    |||||||||||||||||| ||||||| ||||||  | ||||||  ||||| | |||||||||| ||||||||||||||||||| ||||| || |||||||    
T  7377353 ttgggttaatatgtcttttaccccctttaatttaagcgagttccagtttatctcctgtaaaaaaaaaagtttagattccaaccctataaaat-aagattc 7377451  T
Q  108 tt 109  Q
    ||    
T  7377452 tt 7377453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 45459766 - 45459658
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttca 111  Q
    |||||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||| |   ||||||||||||||| |   | ||||||||||| ||    
T  45459766 ggttaatatgtctttacccc-tgtaatttggacgagttccgatttaccccctgtaaaaaaatttgtttagattccaaccttgacaaatgaagattctcca 45459668  T
Q  112 caaaacaccc 121  Q
     |||||||||    
T  45459667 aaaaacaccc 45459658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 46624604 - 46624685
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||| ||||| | |||||| |||||||||||||||||||    
T  46624604 gggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctataaaaaaaaaagtttagattccaacc 46624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 6667331 - 6667422
Alignment:
Q  16 aatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    |||||||||||| |||  |||||||  || ||||||  |||||||||||||||||| ||||||||||||||||||| | |||| ||||||||    
T  6667331 aatatgtctttagccctatgtaattcaggcgagttccagtttaccccctgtaaaaaaaaaagtttagattccaaccttgtaatttgaagatt 6667422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 162847 - 162760
Alignment:
Q  21 gtctttaccccctgtaatttgggtgagttctggtttaccc-cctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||||||||||| ||  |||||| |  ||||||||||  ||||||||||||||| || || |||||||||||||||    
T  162847 gtctttaccccctgtaatttgggtgattttcggtttatcttcctgtaaaaa--aaagtttagattccatccctaaaatatgaagattctt 162760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 161687 - 161761
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattcc 86  Q
    ||||||||||||||||| ||| |||||||| |  |||||  |||||| |||||||||||| |||||||||||||||    
T  161687 gggttaatatgtctttatcccttgtaatttagacgagtttcggtttatcccctgtaaaaa-aaaagtttagattcc 161761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 21796115 - 21796176
Alignment:
Q  11 gggttaatatgtctttaccc-cctgtaatttgggtgagttctggttta-ccccctgtaaaaa 70  Q
    |||||||||||||||||||| ||||||||||||| || ||| |||||| |||||||||||||    
T  21796115 gggttaatatgtctttaccctcctgtaatttgggcgaattccggtttacccccctgtaaaaa 21796176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 21813896 - 21813819
Alignment:
Q  9 ttgggttaatatgtctttac-cccctgtaatttgggtgagttctggtttacc-ccctgtaaaaataaaagtttagatt 84  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||||| || || ||| |||| |||| ||||||||    
T  21813896 ttgggttaatatgtctttacccccctgtaatttgggcgagttccggttttcctccgtgtgaaaaaaaaaatttagatt 21813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 5469341 - 5469387
Alignment:
Q  60 ccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    ||||||||||||||  ||||||||||||||| |||||| ||||||||    
T  5469341 ccctgtaaaaataattgtttagattccaaccttataatttgaagatt 5469387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 9775906 - 9775814
Alignment:
Q  13 gttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||| |||||||||| |||||||| || |||||| |||||| | ||| ||||||   ||||||||||||||||  | |||| |||||||||||    
T  9775906 gttaatatatctttacccc-tgtaatttaggcgagttccggtttatctcctataaaaa---aagtttagattccaacgttgtaatttgaagattctt 9775814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 22315145 - 22315242
Alignment:
Q  11 gggttaatatgtctttac-cccctgtaatttgggtgagttctggtttaccccctgtaaaaataaa-agtttagattccaaccatataatatgaagatt 106  Q
    |||||||||| | ||||| |||||||||| |  | || ||||||||||| ||||||||||| |||  ||||||||||||||| | |||| ||||||||    
T  22315145 gggttaatatatgtttactcccctgtaatattagcgatttctggtttactccctgtaaaaaaaaattgtttagattccaaccctgtaatttgaagatt 22315242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 32976897 - 32976819
Alignment:
Q  12 ggttaatatgtctttaccccct-gtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacca 91  Q
    |||||||||||||||||| ||| |||||||||| |||||| ||||||  |||| |||||  |||||||| |||| ||||||    
T  32976897 ggttaatatgtctttaccacctcgtaatttgggcgagttccggtttaatccctataaaa--aaaagtttcgatttcaacca 32976819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 21853418 - 21853474
Alignment:
Q  13 gttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||| |||||||||||||||||| | ||| | ||||||||| || |||||||||    
T  21853418 gttaataggtctttaccccctgtaatataggtcatttctggttttcctcctgtaaaa 21853474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 24987608 - 24987668
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaat 71  Q
    ||||||||| |||||||||||||||||| | ||| | ||| |||||  |||||||||||||    
T  24987608 gggttaataggtctttaccccctgtaatataggtcatttccggtttttcccctgtaaaaat 24987668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 39910646 - 39910716
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttag 81  Q
    |||||||||| |||||||| |||||||||||| || |||||  ||||||| | ||||||||| ||||||||||    
T  39910646 ttgggttaatgtgtcttta-cccctgtaatttaggcgagtttcggtttactctctgtaaaaa-aaaagtttag 39910716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 42736880 - 42736820
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||||||| ||||||| |||||||||| | ||| | ||| ||||| ||||||||||||    
T  42736880 ttgggttaataggtctttatcccctgtaatataggtcatttccggttttccccctgtaaaa 42736820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 25979588 - 25979780
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttca 111  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  25979588 ggttaatatgtctttaccccctgtaatttgggcga-ttccggtttaccccctgtaaaaataaaagtttagaatccaaccctataatatgaagattcttca 25979686  T
Q  112 caaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  25979687 caaaacacccctataatattaagattctccacaaaacactcttgaccccatccagacactgatgtggcacgccactgtgtaattattttaattt 25979780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 5202729 - 5202924
Alignment:
Q  11 gggttaatatgtctttaccccct-gtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||| |||||||||| |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5202729 gggttaatatgtttttacccccttgtaatttgggcgagtttcggtttaccccctgtaaaaataaaagtttagattccaaccctataatatgaagattctt 5202828  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||    
T  5202829 cacaaaacacccctataatattaagattctccgcaaaacaccactgaccccatccagacgctgatgtgacacgccactgtgtaattattttaattt 5202924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 15248393 - 15248585
Alignment:
Q  15 taatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcac 112  Q
    |||||||||||||||||| ||||||||||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||||| |||||||| |||    
T  15248393 taatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctccac 15248492  T
Q  113 aaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  15248493 aaaacacccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattatttttattt 15248585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 18695346 - 18695492
Alignment:
Q  11 gggttaatatgtctttaccccc--tgtaatttgggtgagttctggtttaccccct-gtaaaaataaaagtttagattccaaccatataatatgaagattc 107  Q
    ||||||||||||||||||||||  | ||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||    
T  18695346 gggttaatatgtctttaccccccctctaatttgggcgagttccggtttacccccttgtaaaaataaaagtatagattccaaccctataatatgatgattc 18695445  T
Q  108 ttcacaaaacacccctataatattaagattctccacaaaacacccct 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18695446 ttcacaaaacacccctataatattaagattctccacaaaacacccct 18695492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 43238540 - 43238401
Alignment:
Q  66 aaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatcca 165  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||  || |||||||||    
T  43238540 aaaaaaaaaagtttagattacaaccttataatatgaagattctccacaaaacatccctataatatgaagattctccacaaaacacctttgtctccatcca 43238441  T
Q  166 gacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||| |||||| |||||| |||||||||||||||||    
T  43238440 gacgctgacgtggcacgccactatgtaattattttaattt 43238401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 18695461 - 18695574
Alignment:
Q  92 tataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgt 191  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  18695461 tataatattaagattctccacaaaacacccctataatattaagattctccacaaaacaccactgaccccatccagacgatgatgtggcacgccactgtgt 18695560  T
Q  192 aattattttaattt 205  Q
    ||||||||||||||    
T  18695561 aattattttaattt 18695574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 18748046 - 18748176
Alignment:
Q  75 agtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgat 174  Q
    |||||||||||||||| ||||||||||||||||| || | ||||||||| |||||| ||||||||||||||||||||  |||| |||||||||||||||     
T  18748046 agtttagattccaaccctataatatgaagattctccatagaacacccctgtaatatgaagattctccacaaaacaccaatgaccccatccagacgctgac 18748145  T
Q  175 gtggcatgccactgtgtaattattttaattt 205  Q
     ||||||||||||||||||||||||||||||    
T  18748146 ttggcatgccactgtgtaattattttaattt 18748176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 9894602 - 9894488
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||||||||||||||| |||||| || |||||| | ||||  ||||||||||| ||||  ||||||||||||| |||||||||||||||||    
T  9894602 ttgggttaatatgtctttaccccctataatttaggcgagttccgatttattccctgtaaaaaaaaaaaattagattccaaccctataatatgaagattct 9894503  T
Q  109 tcacaaaacacccct 123  Q
     ||||||||||||||    
T  9894502 ccacaaaacacccct 9894488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 15249599 - 15249517
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  15249599 ttgggttaatatgtctttaccccctgtaatttgggcgagttctggttttcccccctgtaaaaaaaaaagtttagattccaacc 15249517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 9894522 - 9894437
Alignment:
Q  120 ccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||||||| ||||||||||    
T  9894522 ccctataatatgaagattctccacaaaacacccctgacctcatccagacgctgacgtggcacgccactgtgtaatgattttaattt 9894437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 22285998 - 22286109
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccc-cctgtaaaaataaaa-gtttagattccaaccatataatatgaagattct 108  Q
    ||||||||||||||||| | | | |||||| || |||||||||||||||| |||||||||| |||| ||||||||| ||||| ||||||||||||||| |    
T  22285998 gggttaatatgtctttatctcttataatttaggcgagttctggtttaccctcctgtaaaaaaaaaaagtttagatttcaaccctataatatgaagattat 22286097  T
Q  109 tcacaaaacacc 120  Q
     |||||||||||    
T  22286098 ccacaaaacacc 22286109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 10746220 - 10746330
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataa-aagtttagattccaaccatataatatgaagattcttc 110  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||| || | ||||||||||||||| |  || |||||||||||      
T  10746220 ggttaatatgtctttaccctttgtaatttgggtgagttctggtttaccttctgtaaaaaaaatatgtttagattccaaccttgaaaaatgaagattctct 10746319  T
Q  111 acaaaacaccc 121  Q
    | |||||||||    
T  10746320 aaaaaacaccc 10746330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 18859073 - 18859182
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||| ||||  |||||||||||| |||||  |||||| |||||||||||| |||| |||||||| ||||| |||||||| ||||||||     
T  18859073 gggttaatatgtcttaacccttctgtaatttgggcgagtttcggtttatcccctgtaaaaa-aaaattttagattacaaccctataatattaagattctc 18859171  T
Q  110 cacaaaacacc 120  Q
    |||||||||||    
T  18859172 cacaaaacacc 18859182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 42742799 - 42742905
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttca 111  Q
    |||||||||||||||||||| | ||||||||||||| ||  ||||| |||||||||||| | ||||||||||| ||||  ||| ||||||||||||| ||    
T  42742799 ggttaatatgtctttaccccttataatttgggtgagatccagttta-cccctgtaaaaa-agaagtttagatttcaactctatgatatgaagattctcca 42742896  T
Q  112 caaaacacc 120  Q
    |||||||||    
T  42742897 caaaacacc 42742905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 42742876 - 42742959
Alignment:
Q  122 ctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||| |||| ||||||||||||||||||||  ||||  |||||||||||||| |||||| |||||||| |||||||||||||||    
T  42742876 ctatgatatgaagattctccacaaaacacctatgacctcatccagacgctgacgtggcacgccactgtataattattttaattt 42742959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 18748859 - 18748777
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||| |||||||||||||| || |||||||||||  |||||| ||||||||||| | ||||||||||||||||||||||||||    
T  18748859 ttggtttaatatgtctttaacctctgtaatttggacgagttccggtttacccccatctaaaaataaaagtttagattccaacc 18748777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 42744165 - 42744085
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccc-cctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||| ||||||||||| ||||||||||| |||||  ||||||||| |||||||||| || | ||||||||||||||    
T  42744165 gggttaatacgtctttaccccatgtaatttgggcgagtttcggtttacccacctgtaaaaaaaataatttagattccaacc 42744085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 18859151 - 18859188
Alignment:
Q  120 ccctataatattaagattctccacaaaacacccctgac 157  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18859151 ccctataatattaagattctccacaaaacaccgctgac 18859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 22286078 - 22286131
Alignment:
Q  120 ccctataatattaagattctccacaaaacacccctgactccatccagacgctga 173  Q
    ||||||||||| |||||| ||||||||||||| |||||  ||| ||||||||||    
T  22286078 ccctataatatgaagattatccacaaaacacctctgacctcattcagacgctga 22286131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 22535739 - 22535682
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    |||||||| ||||||||| |||||||| | ||| | ||||||||| ||||||||||||    
T  22535739 ggttaataggtctttacctcctgtaatataggtcatttctggttttccccctgtaaaa 22535682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 5203795 - 5203760
Alignment:
Q  54 tttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5203795 tttaccccctgtaaaaa-aaaagtttagattccaacc 5203760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 29099812 - 29099741
Alignment:
Q  11 gggttaatatgtctttacc-ccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttaga 82  Q
    |||||||||||||||||||  |||||||||||||||||| | ||| || | |||| ||||| |||||||||||    
T  29099812 gggttaatatgtctttaccttcctgtaatttgggtgagtaccggtata-ctcctgcaaaaaaaaaagtttaga 29099741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 34384754 - 34384782
Alignment:
Q  13 gttaatatgtctttaccccctgtaatttg 41  Q
    |||||||||||||||||||||||||||||    
T  34384754 gttaatatgtctttaccccctgtaatttg 34384782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 44579324 - 44579216
Alignment:
Q  1 attagatgttgggttaatatgtcttta-ccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatat 99  Q
    ||||||| |||||||||||||||||||   |||||||||||||| ||||||  |||||| || | |||||| |   |||||||||| |||| |  || ||    
T  44579324 attagatattgggttaatatgtctttatttccctgtaatttgggcgagttccagtttactccttctaaaaaaatttgtttagattcaaaccttgaaaaat 44579225  T
Q  100 gaagattct 108  Q
    |||||||||    
T  44579224 gaagattct 44579216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 6e-76; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 9 - 205
Target Start/End: Complemental strand, 53552354 - 53552157
Alignment:
Q  9 ttgggttaatatgtctttacc--ccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    |||||||||||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  53552354 ttgggttaatatgtctttaccttccctgtaatttgggcgagttccggtttaccccctgtaaaaataaaagtttagatttcaaccctataatatgaagatt 53552255  T
Q  107 cttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  53552254 cttcacaaa-cacccctataatattaagattctccacaaaacacctctcaccccatccagaagctgatgtggcacgccactgtgtaattattttaattt 53552157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 205
Target Start/End: Original strand, 42250134 - 42250330
Alignment:
Q  7 tgttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    |||||||||||||||| |||||||||||||||||||| |||||| |||| | ||  |||||||||||||||||| ||| ||||| |||||||||||||||    
T  42250134 tgttgggttaatatgtatttaccccctgtaatttgggcgagttccggttaatcc--tgtaaaaataaaagtttatatttcaaccctataatatgaagatt 42250231  T
Q  107 cttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  42250232 cttcacaaaacacccctataatattaagattctccacaaaacacctctgaccccatccagacgttgatgtggcacgccactgtgtaattattttaattt 42250330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 21021284 - 21021089
Alignment:
Q  12 ggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||| ||||||||| ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||     
T  21021284 ggttaatatgtttttacccccctgtaatttgggcgagttccggtttacccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 21021185  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21021184 cacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccatccagacgctgatgtggcacgccactgtgtaattattttaattt 21021089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 33269571 - 33269381
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||| ||||| ||||||||  |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  33269571 gggttaatatgtctttatcccctataatttggacgagttccggtttaccccctgtaaaaataaaagtttagatttcaaccctataatatgaagattcttc 33269472  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattatttta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||| ||||  ||| ||||||||||||||||| ||||||||||||||||||||    
T  33269471 acaaaacacccctataatattaagattcttcacaaagcacccatgacctcattcagacgctgatgtggcacgccactgtgtaattatttta 33269381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 25437930 - 25438126
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||  |||||| |||||  ||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  25437930 gggttaatatgtctttacccccctgtaatttggacgagttccggtttttccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 25438029  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25438030 ccacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 25438126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 2713366 - 2713172
Alignment:
Q  13 gttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccct-gtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    |||||||||||||||| || |||||||||||| ||||||  |||||| || | |||||||||||||||||||||| |||| |||||||||||||||||||    
T  2713366 gttaatatgtctttacacctctgtaatttgggcgagttccagtttacacctttgtaaaaataaaagtttagattctaaccctataatatgaagattcttc 2713267  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2713266 acaaaacacccctataatattaagattctccacaaaacacctctgatctcatccagacgctgatgtggcacgccactgtgtaattattttaattt 2713172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 46079141 - 46079281
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46079141 gggttaatatgtttttaccccctgtaatttgggcgagttccggtttaccccctgtaaaaataaaagtttagattccaaccctataatatgaagattcttc 46079240  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacc 151  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46079241 acaaaacacccctataatattaagattctccacaaaacacc 46079281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 23020203 - 23020011
Alignment:
Q  15 taatatgtctttaccccctgtaatttgggtgagttctggtttaccccct-gtaaaaataaaa-gtttagattccaaccatataatatgaagattcttcac 112  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||| ||||||| |||| ||||||||||||||| |||||||| |||||||| |||    
T  23020203 taatatgtctttaccccctgtaatttgggcgagttccggttttcccccttgtaaaaaaaaaaagtttagattccaaccctataatataaagattctccac 23020104  T
Q  113 aaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||| | |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  23020103 aaaacacccttgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattatttttattt 23020011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 30606025 - 30606221
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  30606025 gggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 30606124  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||    
T  30606125 ccacaaaacacccctgtaatatgaagattcttcacaaaacacccctgaccccattcaaacgctgatgtggcacgccactgtgtaattattttaattt 30606221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 34422052 - 34422248
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| ||||||||||| |||||  ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  34422052 gggttaatatgtctttacccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct 34422151  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
     |||||||||||||| |||||| |||||||| ||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||    
T  34422152 ccacaaaacacccctgtaatatgaagattcttcacaaaacacccctgaccccattcaaacgctgatgtggcacgccactgtgtaattattttaattt 34422248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 10670329 - 10670519
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||   ||||||||||||||||| |||||||| |||||||| |    
T  10670329 gggttaatatgtctttacctcctgtaatttgggcgagttccggtttaccccctgaaaaaa---aagtttagattccaaccctataatataaagattctcc 10670425  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||| ||||| | |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||    
T  10670426 acaaa-cacccatgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattatttgaattt 10670519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 10883968 - 10884158
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||   ||||||||||||||||| |||||||| |||||||| |    
T  10883968 gggttaatatgtctttacctcctgtaatttgggcgagttccggtttaccccctgaaaaaa---aagtttagattccaaccctataatataaagattctcc 10884064  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||| ||||| | |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||    
T  10884065 acaaa-cacccatgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattatttgaattt 10884158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 21077182 - 21076990
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttac-cccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||    |||||||||||||||||    
T  21077182 gggttaatatgtatttacccccctgtaatttgggcgagttccggtttactcccctgtaaaaataaaagtttagattcca----tataatatgaagattct 21077087  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    | |||||||||||||||||||||||||||||||||||||||||  |||  ||||| |||||||||||||||| | ||||| ||||||||||||||||    
T  21077086 ttacaaaacacccctataatattaagattctccacaaaacacctatgatcccatctagacgctgatgtggcacgtcactgcgtaattattttaattt 21076990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 40315435 - 40315244
Alignment:
Q  15 taatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattcttcac 112  Q
    |||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||| |||||||||||||| |||||||| || ||||| |||    
T  40315435 taatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaa-tttagattccaaccttataatataaatattctccac 40315337  T
Q  113 aaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||  |||  |||||||||||||||| ||||||||||||||||||| ||||    
T  40315336 aaaacacccctgtaatatgaagattctccacaaaacacccttgacctcatttagacgctgatgtggcacgccactgtgtaattatttttattt 40315244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 40325510 - 40325319
Alignment:
Q  15 taatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattcttcac 112  Q
    |||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||| |||||||||||||| |||||||| || ||||| |||    
T  40325510 taatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaa-tttagattccaaccttataatataaatattctccac 40325412  T
Q  113 aaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||  |||  |||||||||||||||| ||||||||||||||||||| ||||    
T  40325411 aaaacacccctgtaatatgaagattctccacaaaacacccttgacctcatttagacgctgatgtggcacgccactgtgtaattatttttattt 40325319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 46575964 - 46576115
Alignment:
Q  54 tttaccccct-gtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacaccc 152  Q
    |||||||||| ||||||| ||||||| ||||||||||| || ||||| |||||||||||||||||| |||| |||||| ||||||||||||||||||||     
T  46575964 tttacccccttgtaaaaa-aaaagttcagattccaaccctaaaatataaagattcttcacaaaacatccctgtaatatgaagattctccacaaaacacct 46576062  T
Q  153 ctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||  ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  46576063 ctgacctcattcagacgctgatgtggcacgccactgtgtaattattttaattt 46576115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 2568155 - 2568344
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||| ||||| ||||||||||||  | ||||||||||||||  | ||| |||| ||||||||||||| ||||| ||||||||||||||||| |    
T  2568155 gggttaatatgactttatcccctgtaatttatgcgagttctggtttacttc-tgttaaaa-aaaagtttagatttcaaccctataatatgaagattctcc 2568252  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaa 202  Q
    |||||||| | || |||||| |||||||||||||||||||  ||||| ||||||| ||||||| |||||| |||| |||||| |||||||||    
T  2568253 acaaaacatctctgtaatatgaagattctccacaaaacacgtctgaccccatccaaacgctgacgtggcacgccattgtgtacttattttaa 2568344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 48182966 - 48182854
Alignment:
Q  93 ataatatgaagattcttcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgta 192  Q
    ||||||| |||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  48182966 ataatataaagattctccacaaaacatccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgta 48182867  T
Q  193 attattttaattt 205  Q
    |||||||||||||    
T  48182866 attattttaattt 48182854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 2856420 - 2856285
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttca 111  Q
    ||||||||| |||||| ||||||||||||||  |||||  |||||| | | |||||||||||||||||||||| ||||| ||||| ||||||||| ||||    
T  2856420 ggttaatatatctttatcccctgtaatttggacgagtttcggtttatcacatgtaaaaataaaagtttagatttcaaccttataaaatgaagatttttca 2856321  T
Q  112 caaaacacccctataatattaagattctccacaaaa 147  Q
    |||||||||||||| ||||||||||| |||||||||    
T  2856320 caaaacacccctatgatattaagattttccacaaaa 2856285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 48509625 - 48509443
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||| || | ||| |  ||||| || |||||||||||||| || |||||| | || |||||||||||||||  |  ||||||||||||||    
T  48509625 ttgggttaatatgttttaatcccattaaattttggcgagttctggtttactcc-tgtaaacaaaagagtttagattccaacactggaatatgaagattct 48509527  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgta 192  Q
    |||||||||| |||| |||||| || |||||||||||||||||| | ||  |||||||||||||| |||||| |||||||||||    
T  48509526 tcacaaaacatccctgtaatatgaaaattctccacaaaacacccataacctcatccagacgctgaggtggcacgccactgtgta 48509443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 48183241 - 48183152
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaaccatataatat 99  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  48183241 gggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatat 48183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 21075157 - 21075236
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| ||||||||||||||||| || |||||| |||||| |||||||||||| |||||||||||||||||||    
T  21075157 gggttaatatgtatttaccccctgtaatttaggcgagttccggtttatcccctgtaaaaaaaaaagtttagattccaacc 21075236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 21463006 - 21463091
Alignment:
Q  120 ccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||| || |||||||||||||||||   ||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  21463006 ccctataatatgaaaattctccacaaaacaccatcgaccccatccagacgctgacgtggcataccactgtgtaattattttaattt 21463091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 40314216 - 40314296
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||| ||||||||||||| |||||| || ||| ||||||||||||| |||||||||||||||||||    
T  40314216 gggttaatatgtctttacctcctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 40314296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 40324292 - 40324372
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||| ||||||||||||| |||||| || ||| ||||||||||||| |||||||||||||||||||    
T  40324292 gggttaatatgtctttacctcctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 40324372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 30607250 - 30607169
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  30607250 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 30607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 34423277 - 34423196
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  34423277 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 34423196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 10336849 - 10336928
Alignment:
Q  126 aatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||| |||||||||||||||||||   |   ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10336849 aatatgaagattctccacaaaacacttatatatccatccagacgctgatgtggcacgccactgtgtaattattttaattt 10336928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 25439182 - 25439102
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||| || ||| ||||||||||||| |||||||||||||||||||    
T  25439182 gggttaatatgtctttacccccttgtaatttgggcgagttccggttttcccccctgtaaaaa-aaaagtttagattccaacc 25439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 48181824 - 48181905
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| | |||||| |||||||||||||||||||    
T  48181824 gggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctataaaaaaaaaagtttagattccaacc 48181905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 1968282 - 1968184
Alignment:
Q  11 gggttaatatgtctttaccccct-gtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||||| || |||||||||  |||||| | |||||||| |||||||| |||||||||||||| |||||| |||| |||||||||||    
T  1968282 gggttaatatgtctttaccctcttgtaatttggacgagttccgatttacccc-tgtaaaaa-aaaagtttagattctaaccatgtaatttgaagattctt 1968185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 4499847 - 4499769
Alignment:
Q  9 ttgggttaatatgtctttac-cccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattc 85  Q
    |||||||||||||||||||| ||||||||||||||| |||||| || ||| ||||||||||||| | ||||||||||||    
T  4499847 ttgggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaataagtttagattc 4499769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 21462971 - 21463037
Alignment:
Q  54 tttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaacacc 120  Q
    ||||| ||||||||||| ||||||||||||| ||||| ||||||||||| ||||| |||||||||||    
T  21462971 tttactccctgtaaaaaaaaaagtttagatttcaaccctataatatgaaaattctccacaaaacacc 21463037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 23018999 - 23019081
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgag-ttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| |||| ||||||||||||||| ||| |||   ||| ||||||||||||| |||||||||||||||||||    
T  23018999 ttgggttaatatgtttttatcccctgtaatttgggcgagtttcgattttcccccctgtaaaaaaaaaagtttagattccaacc 23019081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 4493691 - 4493767
Alignment:
Q  11 gggttaatatgtcttta-ccccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattc 85  Q
    ||||||||||||||||| |||||||||||||||| |||||| || ||| ||||||||||||| | ||||||||||||    
T  4493691 gggttaatatgtctttacccccctgtaatttgggcgagttccggtttttccccctgtaaaaaaataagtttagattc 4493767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 46577134 - 46577059
Alignment:
Q  14 ttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||||||||||   ||||| |||||  || ||||||||| |||||||||||||||||||    
T  46577134 ttaatatgtctttaccccctgtaatttggacaagttccggtttttcctctgtaaaaa-aaaagtttagattccaacc 46577059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 46080598 - 46080519
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||| |||  |||||||||||| | | |||||  |||||||||||||||||  |||||||||||||||||||    
T  46080598 gggttaatatgtatttgtcccctgtaatttagataagttccagtttaccccctgtaaaagaaaaagtttagattccaacc 46080519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 21020033 - 21020107
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagat 83  Q
    |||||||||||| |||||||| |||||||| ||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  21020033 gggttaatatgtttttacccccctgtaattagggcgagttctggttttcccccctgtaaaaaaaaaagtttagat 21020107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 48508289 - 48508359
Alignment:
Q  11 gggttaatatgtctttaccc-cctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagttta 80  Q
    |||||||||||||||||||| ||| |||||| || |||||| |||||||||| |||||||| |||||||||    
T  48508289 gggttaatatgtctttaccctcctataattttggcgagttccggtttaccccatgtaaaaaaaaaagttta 48508359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 468216 - 468295
Alignment:
Q  12 ggttaatatgtctttacccc-ctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||| || |||||||| ||||||||| || |||||| |||||| ||||||||||||| |||||||||||||||||||    
T  468216 ggttaataggtatttacccccctgtaatttaggcgagttccggtttacccccctgtaaaaa-aaaagtttagattccaacc 468295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 46079497 - 46079537
Alignment:
Q  165 agacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  46079497 agacgctgatgtggcacgccactgtgtaattattttaattt 46079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 10671549 - 10671480
Alignment:
Q  19 atgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| |||||||||| |||||  ||||| ||||||||||||| ||||||||||||| |||||    
T  10671549 atgtctttaccccc-gtaatttgggcgagtttcggtttcccccctgtaaaaa-aaaagtttagatttcaacc 10671480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 10885189 - 10885120
Alignment:
Q  19 atgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| |||||||||| |||||  ||||| ||||||||||||| ||||||||||||| |||||    
T  10885189 atgtctttaccccc-gtaatttgggcgagtttcggtttcccccctgtaaaaa-aaaagtttagatttcaacc 10885120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 2569167 - 2569107
Alignment:
Q  14 ttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa 75  Q
    |||||||||||||||||| ||||||||||| |||||| | |||||| |||||||||| ||||    
T  2569167 ttaatatgtctttacccc-tgtaatttgggcgagttccgatttacctcctgtaaaaaaaaaa 2569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 21463130 - 21463165
Alignment:
Q  170 ctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||| |||||||||||||||||||||||||||||||    
T  21463130 ctgacgtggcatgccactgtgtaattattttaattt 21463165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 33268196 - 33268271
Alignment:
Q  14 ttaatatgtctttaccc-cctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||| ||||||| ||| |||||| || |||||  |||||||||| |||||||| |||||||||||||||||||    
T  33268196 ttaatatgtatttaccctcctataatttaggcgagtttcggtttacccc-tgtaaaaa-aaaagtttagattccaacc 33268271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 4e-71; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 3371384 - 3371190
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| ||||| |||||||| ||||||||||||||||||| |||||||| ||||||||     
T  3371384 gggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattct- 3371286  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  3371285 cacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 3371190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 7121320 - 7121515
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||     
T  7121320 gggttaatatgtctttaccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattctc 7121419  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  7121420 cacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccattcagacgctgatatggcacgccactgtgtaattattttaattt 7121515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 40721676 - 40721864
Alignment:
Q  15 taatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaa 114  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  40721676 taatatgtctttacccc-tgtaatttgggcgagttccggttttccccctgtaaaaaaaaaagtttagattccaaccctataatataaagattcttcacaa 40721774  T
Q  115 aacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||| |||||| |||||||||||| ||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  40721775 aacacccctgtaatatgaagattctccac-aaatacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 40721864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 21789549 - 21789739
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||||||||||||||| || |||||| |||||  ||||||||||||| ||||||||||||||||||| | |||||| ||||||||     
T  21789549 gggttaatatgtctttaccccctgtaatttaggcgagttccggtttttccccctgtaaaaaaaaaagtttagattccaaccctgtaatataaagattctc 21789648  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattatttt 200  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||| | || ||||||||||||||||| |||||||||||||||||||    
T  21789649 cacaaaacacccctgtaatatgaagatcctccacaaaacacccctgaccctattcagacgctgatgtggcacgccactgtgtaattatttt 21789739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 42537123 - 42536929
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa-gtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||  ||||||||||| |||||| ||||| | || |||||||| |||| ||||||||||||||| |||||||||||||||||     
T  42537123 gggttaatatgtctttacccattgtaatttgggcgagttccggttttctcc-tgtaaaaaaaaaaagtttagattccaaccctataatatgaagattctc 42537025  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| ||||| || |||||| |||||| ||||||||||||||||||||||||    
T  42537024 cacaaaacacccctgtaatatgaagattctccacaaaacacccctgaccccatctagtcgctgacgtggcacgccactgtgtaattattttaattt 42536929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 21715633 - 21715823
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||| ||||||||||||| ||||||||| ||||||||| |||||  ||||||||||||| |||| |||||||||||||| | |||||| ||||||||     
T  21715633 gggttactatgtctttaccctctgtaatttaggtgagttccggtttttccccctgtaaaaaaaaaaatttagattccaaccctgtaatataaagattctc 21715732  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattatttt 200  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||| | || |||||||||||||||||  ||||||||||||||||||    
T  21715733 cacaaaacacccctgtaatatgaagatcctccacaaaacacccctgaccctattcagacgctgatgtggcacaccactgtgtaattatttt 21715823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 31797121 - 31796926
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccct-gtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||| | |||||  || |||||||| | |||||| ||||||||| || ||||||| ||||  ||| ||||||| |  ||||||| ||||||||     
T  31797121 gggttaatatatttttacgtccggtaatttgtgcgagttccggtttaccctcttgtaaaaaaaaaaaattaaattccaatcccataatataaagattctc 31797022  T
Q  110 cacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||| |||| |||||| || |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  31797021 cacaaaacatccctgtaatatgaacattctccacaaaacacccctgacctcatccagacgctgatgtggcacgccactgtgtaattattttaattt 31796926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 3859757 - 3859839
Alignment:
Q  9 ttgggttaatatgtctttacccc-ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| |||||||| |||||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||    
T  3859757 ttgggttaatatgtgtttacccccctgtaatttgggcgagttccggtttaccccctgtaaaaaaaaaagtttagattcgaacc 3859839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 25641861 - 25641930
Alignment:
Q  52 ggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttcacaaaacacccc 122  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  25641861 ggtttaccccctgtaaaaa-aaaagtttagattccaaccctataatatgaagattctccacaaaacacccc 25641930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 14212383 - 14212464
Alignment:
Q  11 gggttaatatgtcttta-ccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||    
T  14212383 gggttaatatgtctttagccccctgtaatttgggtgagtttcggtttagccccctgtaaaaaaaaaagtttagattccaacc 14212464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 40728333 - 40728250
Alignment:
Q  9 ttgggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  40728333 ttgggttaatatgtctttacccccctgtaatttgggcgagttccggttttcccccctgtaaaaaaaaaagtttagattccaacc 40728250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 25641897 - 25641976
Alignment:
Q  120 ccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattatttt 200  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||||| ||||||  | ||||||||||||||||    
T  25641897 ccctataatatgaagattctccacaaaacaccccagact-catccagacgctgacgtggcacacaactgtgtaattatttt 25641976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 3370126 - 3370209
Alignment:
Q  9 ttgggttaatatgtctttaccccc-tgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||  ||||||||||||| ||||||||||||| |||||    
T  3370126 ttgggttaatatgtctttacccccctgtaatttgggcgagttccggtttttccccctgtaaaaaaaaaagtttagatttcaacc 3370209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 7216673 - 7216575
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||||||||   | ||||||||||| |||||| |||||||| ||| |||||  ||||||||||||||||||| | |||| |||||||||||    
T  7216673 gggttaatatgtctttatttcttgtaatttgggcgagttccggtttacctcctataaaataaaaagtttagattccaaccctgtaatttgaagattctt 7216575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 294416 - 294328
Alignment:
Q  19 atgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    ||||||||||||||||||||||| | |||||  ||||||||||||||||||  ||||||||||||  ||||| | |||| |||||||||||    
T  294416 atgtctttaccccctgtaatttgtgcgagtttcggtttaccccctgtaaaa--aaaagtttagatctcaaccctgtaatttgaagattctt 294328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 3860815 - 3860736
Alignment:
Q  121 cctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattatttt 200  Q
    |||||||||| |||||| |||||||||||||| |||  |||||||||||||||  ||||| |||||||||| ||||||||    
T  3860815 cctataatatgaagattttccacaaaacacccatgatcccatccagacgctgacatggcacgccactgtgtgattatttt 3860736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 7122564 - 7122484
Alignment:
Q  11 gggttaatatgtctttacc-ccctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||| |||||||||||||| |||||| || ||| |||||| |||||| |||||||||||||||||||    
T  7122564 gggttaatatgtctttacctccctgtaatttgggcgagttccggttttcccccctataaaaa-aaaagtttagattccaacc 7122484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 25642782 - 25642706
Alignment:
Q  14 ttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||||||||||| ||||||||||| |||||| |||||| ||||| |||||| ||| |||||||||||||||    
T  25642782 ttaatatgtctttacccccctgtaatttgggcgagttccggtttatcccctataaaaa-aaacgtttagattccaacc 25642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 25796276 - 25796355
Alignment:
Q  126 aatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||| |||||||||||||||| |    || |||||||||||||||||||||||| | |||| |||||||||||||||||    
T  25796276 aatatgaagattctccacaaaatatttatgtctccatccagacgctgatgtggcacgtcactatgtaattattttaattt 25796355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 15839363 - 15839279
Alignment:
Q  9 ttgggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaa-gtttagattccaacc 90  Q
    |||||||||||||| ||||||||| | |||||| || |||||| ||||||||||| |||||||| |||| |||||||||||||||    
T  15839363 ttgggttaatatgtatttacccccctttaatttaggcgagttccggtttacccccctgtaaaaaaaaaaagtttagattccaacc 15839279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 7006404 - 7006347
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaa 70  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||    
T  7006404 gggttaatatgtctttacccc-tgtaatttgggcgagttctgattta-cccctgtaaaaa 7006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 10976804 - 10976746
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||||| |||||||||||||||||| | ||| | ||| ||||| ||||||||||||    
T  10976804 gggttaataggtctttaccccctgtaatataggtcatttccggttttccccctgtaaaa 10976746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 27757702 - 27757653
Alignment:
Q  59 cccctgtaaaaataaaagtttagattccaaccatataatatgaagattctt 109  Q
    |||||||||||| ||| ||||||||||||||| | ||||||||||||||||    
T  27757702 cccctgtaaaaa-aaatgtttagattccaaccgtgtaatatgaagattctt 27757653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 293067 - 293152
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataat 97  Q
    ||||||||||| |||||||||| |||||| || ||||||  ||||| |  |||||||||||||    |||||||||||||| ||||    
T  293067 ggttaatatgtttttaccccctctaatttaggcgagttccagtttatctactgtaaaaataaataaatagattccaaccatgtaat 293152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21716909 - 21716853
Alignment:
Q  33 tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||  |||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  21716909 tgtaatttggaagagttccggttttccccctgaaaaaa-aaaagtttagattccaacc 21716853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21796645 - 21796589
Alignment:
Q  33 tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    ||||||||||  |||||| |||||  |||||||||||| |||||||||||||||||||    
T  21796645 tgtaatttggaagagttccggtttttcccctgtaaaaa-aaaagtttagattccaacc 21796589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 38482318 - 38482379
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttacc-ccctgtaaaaat 71  Q
    ||||||||| |||||||||||||||||| | ||| | ||||||||| || ||||||||||||    
T  38482318 gggttaataggtctttaccccctgtaatataggtcaattctggttttcctccctgtaaaaat 38482379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 42536144 - 42536220
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||| |||||||| ||||||||||||||  |||||  |||||  | ||||||||   |||||||||||||||||||    
T  42536144 gggttaatgtgtctttatcccctgtaatttggacgagtttcggtttttctcctgtaaa---aaaagtttagattccaacc 42536220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 3860875 - 3860784
Alignment:
Q  32 ctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa--gtttagattccaaccatataatatgaagattcttcacaaaacaccc 121  Q
    |||||| ||||  |||||||| |||||| || ||||||| ||||  |||||||||  || | ||||||||||||||| | ||||||||||||    
T  3860875 ctgtaacttggacgagttctgatttacctcccgtaaaaaaaaaaaagtttagattttaatcctataatatgaagattttccacaaaacaccc 3860784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 18574859 - 18574899
Alignment:
Q  165 agacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||| |||||| | |||||||||||||||    
T  18574859 agacgctgatgtggcacgccactatataattattttaattt 18574899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 22714587 - 22714523
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa 75  Q
    ||||||||||||  ||||||||||||| ||||| |||||   |||||||| ||||||||| ||||    
T  22714587 gggttaatatgtacttaccccctgtaaattgggcgagttacagtttaccctctgtaaaaaaaaaa 22714523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 31795820 - 31795899
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa-gtttagattccaacc 90  Q
    |||||| ||||| |||||||| ||||||||||| ||||| ||||||  | | |||||||| |||| |||||||||||||||    
T  31795820 gggttagtatgtttttacccc-tgtaatttgggcgagttttggtttttctcttgtaaaaaaaaaaagtttagattccaacc 31795899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 129; Significance: 6e-67; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 100966 - 100770
Alignment:
Q  11 gggttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccc-tgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||||||||||||| |||||||| || |||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||| ||| |||||    
T  100966 gggttaatatgtctttacccccctgtaatttaggcgagttccggtttacccccctgtaaaaataaaagtttagatttcaaccctataatacgaatattct 100867  T
Q  109 tcacaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||    
T  100866 tcacaaaacacccctataatattaaaattctctacaaaacacccctgaccccatccagacgctgatatggcacgccattgtgtaattattttaattt 100770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 99611 - 99693
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggttta-ccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||| ||||||||||||||||| || ||||||  ||||| |||||| | |||| |||||||||||||||||||    
T  99611 ttgggttaatatgtatttaccccctgtaatttaggcgagttccagtttacccccctatgaaaaaaaaagtttagattccaacc 99693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 18814 - 18652
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattcttc 110  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||| |||||||| |||||||||||||| |||| ||||||||||||||||| |    
T  18814 gggttaatatgtctttaccccctgtaatttgggcgagtttcggtttaccccatgtaaaaaaaaaagtttagattcgaaccctataatatgaagattctcc 18715  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctga 173  Q
    ||||||||  |||||||||| |||||||||||||||||||| || || || ||||||||||||    
T  18714 acaaaacatacctataatatgaagattctccacaaaacacctcttaccccttccagacgctga 18652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0760 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0760
Description:

Target: scaffold0760; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 1377 - 1184
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaa-gtttagattccaaccatataatatgaagattcttc 110  Q
    |||||| ||||||||||||  ||||||||| ||||||||| ||||| ||| |||||||| |||| ||||| ||| || || |||||||||||||||||      
T  1377 ggttaacatgtctttaccctttgtaatttgagtgagttctagtttatccc-tgtaaaaaaaaaaagtttaaatttcatccttataatatgaagattctct 1279  T
Q  111 acaaaacacccctataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||||| | || |||||||||||||||||||    
T  1278 acaaaacacccctataatattaagattctccacaaaccacccgtgactccataaagacgctgatgtggcacgtcattgtgtaattattttaattt 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 76; Significance: 2e-35; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 53370 - 53485
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc-ctgtaaaaataaaagtttagattccaaccatataatatgaagattc 107  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||| |||| ||||||||| ||||||||||||||||||| |||||||| |||||||    
T  53370 ttgggttaatatgtctttaccccctgtaatttgggcgagtttcggttttcccccctgtaaaaaaaaaagtttagattccaaccttataatataaagattc 53469  T
Q  108 ttcacaaaacacccct 123  Q
    | ||||||||||||||    
T  53470 tccacaaaacacccct 53485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 53454 - 53536
Alignment:
Q  123 tataatattaagattctccacaaaacacccctgactccatccagacgctgatgtggcatgccactgtgtaattattttaattt 205  Q
    |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  53454 tataatataaagattctccacaaaacacccctgaccccattcagacgctgatgtggcacgccactgtgtaattattttaattt 53536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 54562 - 54485
Alignment:
Q  13 gttaatatgtctttaccccc-tgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaacc 90  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||| |||||    
T  54562 gttaatatgtctttacccccctgtaatttgggcgagttccggttttccccctgtaaaaa-aaaagtttagatttcaacc 54485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 42090 - 42171
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttacccc-ctgt--aaaaataaaagtttagattccaacc 90  Q
    ||||||||||| ||||||||||||||||| || |||||| |||||||||| ||||  ||||| |||||||||||||||||||    
T  42090 ggttaatatgtatttaccccctgtaatttaggcgagttccggtttacccctctgtaaaaaaaaaaaagtttagattccaacc 42171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 1316 - 1400
Alignment:
Q  12 ggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataata 98  Q
    |||||||||||||||||| |||| ||||||   ||||||||||||| | | |||||||| ||||||||||||||||||||| |||||    
T  1316 ggttaatatgtctttacctcctg-aatttgaacgagttctggtttatctc-tgtaaaaaaaaaagtttagattccaaccatttaata 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 15736 - 15850
Alignment:
Q  11 gggttaatatgtctttacccc-ctgtaatttgggtgagttctgg-tttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagattct 108  Q
    |||||||||||| |||||||| |||||||||||| ||||||||| ||| ||||||||||||| |   ||||||||||   || | |||||||||||||||    
T  15736 gggttaatatgtttttacccccctgtaatttgggcgagttctggttttcccccctgtaaaaaaattcgtttagattctgtccctgtaatatgaagattct 15835  T
Q  109 tcacaaaacacccct 123  Q
    |   |||||||||||    
T  15836 ttcgaaaacacccct 15850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 13447 - 13352
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaaataaaagtttagattccaaccatataatatgaagatt 106  Q
    |||||||||| | ||||||||||||||| |  | || || |||||||||||||||||||| |   ||||||||||||||| | |||| ||||||||    
T  13447 gggttaatatatgtttaccccctgtaatattagcgatttttggtttaccccctgtaaaaaaatttgtttagattccaaccttgtaatttgaagatt 13352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 18913 - 18990
Alignment:
Q  9 ttgggttaatatgtcttta-ccccctgtaatttgggtgagttctggtttacc-ccctgtaaaaataaaagtttagatt 84  Q
    ||||||||||||||||||| |||||||||||||||| |||||| ||||| || || ||| |||| |||| ||||||||    
T  18913 ttgggttaatatgtctttacccccctgtaatttgggcgagttccggttttcctccgtgtgaaaaaaaaaatttagatt 18990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 7859 - 7917
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||||| |||||||||||||||||| |  || | ||||||||| ||||||||||||    
T  7859 gggttaataggtctttaccccctgtaatatatgtcatttctggttttccccctgtaaaa 7917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 91050 - 91107
Alignment:
Q  11 gggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaa 68  Q
    ||||||||| |||||||||||||||||| | ||| | |||| |||| |||||||||||    
T  91050 gggttaataggtctttaccccctgtaatataggtcatttctagttttccccctgtaaa 91107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 34885 - 34825
Alignment:
Q  9 ttgggttaatatgtctttaccccctgtaatttgggtgagttctggtttaccccctgtaaaa 69  Q
    ||||||||||| |||||||||||||||||| | ||| | |||  |||| ||||||||||||    
T  34885 ttgggttaataggtctttaccccctgtaatataggtcatttccagttttccccctgtaaaa 34825  T

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