View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20023_high_1_N (Length: 391)
Name: NF20023_high_1_N
Description: NF20023
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20023_high_1_N |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 84 - 365
Target Start/End: Original strand, 48286251 - 48286532
Alignment:
| Q |
84 |
acacaaaatcacaatgcagcacccatcgcccgaacaaaaaccaataatactacaaaaaccaccttgttatagagacccaaacatccaacaaaaaccgctt |
183 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286251 |
acacaaaatcacaatgcagcaaccatcgcccgaacaaaaaccaataatactaccaaaaccaccttgttatagagacccaaacatccaacaaaaaccgctt |
48286350 |
T |
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| Q |
184 |
ccaacacgaaacccttctctcccaccttctttccgaccaaaacccaagaaacgtaattattgtcgcctatgttgttgcacattttgcatcatcttcctca |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
48286351 |
ccaacacgaaacccttctctcccaccttctttccgaccaaaacccaagaaacgtaattattgtcgcctattttgttgcacattttgcatcatcttcctca |
48286450 |
T |
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| Q |
284 |
ttctcttcttccttttcatcctcgccgccgcagttatctacattctctatcaaccttccataccagaattccacctcggttc |
365 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
48286451 |
ttctcttcttccttttcatcctcgccgccgcagttatctacattctctaccaaccttccataccagaattccacctcggttc |
48286532 |
T |
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