View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20024_low_20 (Length: 260)

Name: NF20024_low_20
Description: NF20024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20024_low_20
NF20024_low_20
[»] chr2 (40 HSPs)
chr2 (5-253)||(33580445-33580695)
chr2 (97-216)||(43529776-43529895)
chr2 (62-208)||(18179166-18179312)
chr2 (97-191)||(18884900-18884994)
chr2 (118-205)||(43985263-43985350)
chr2 (97-207)||(44606037-44606147)
chr2 (105-150)||(787373-787418)
chr2 (62-204)||(5759505-5759647)
chr2 (100-150)||(1494430-1494480)
chr2 (97-215)||(9595291-9595409)
chr2 (97-150)||(1647269-1647322)
chr2 (100-152)||(680539-680591)
chr2 (62-150)||(9556237-9556325)
chr2 (98-150)||(33256774-33256826)
chr2 (134-204)||(36677722-36677793)
chr2 (128-203)||(40943977-40944052)
chr2 (118-216)||(1318290-1318387)
chr2 (100-150)||(4350726-4350776)
chr2 (97-155)||(5133805-5133863)
chr2 (86-192)||(13234528-13234634)
chr2 (62-144)||(32821807-32821889)
chr2 (68-150)||(33192206-33192288)
chr2 (65-147)||(44438826-44438908)
chr2 (97-150)||(10285893-10285946)
chr2 (100-189)||(10567093-10567182)
chr2 (97-150)||(12313157-12313210)
chr2 (113-150)||(29430807-29430844)
chr2 (97-150)||(32106783-32106836)
chr2 (97-150)||(33941942-33941995)
chr2 (97-150)||(35379000-35379053)
chr2 (121-205)||(37276803-37276885)
chr2 (118-150)||(1801722-1801754)
chr2 (110-150)||(5902533-5902573)
chr2 (101-137)||(10285392-10285428)
chr2 (62-150)||(12215805-12215893)
chr2 (103-147)||(14451037-14451081)
chr2 (118-150)||(14844998-14845030)
chr2 (117-149)||(16398456-16398488)
chr2 (97-204)||(17775396-17775503)
chr2 (118-150)||(37518842-37518874)
[»] chr7 (26 HSPs)
chr7 (71-208)||(28691762-28691898)
chr7 (62-181)||(20553101-20553220)
chr7 (98-216)||(30535597-30535715)
chr7 (103-203)||(33894666-33894766)
chr7 (62-175)||(44615063-44615176)
chr7 (154-207)||(19624267-19624320)
chr7 (97-150)||(43219628-43219681)
chr7 (97-150)||(44808191-44808244)
chr7 (97-150)||(46082069-46082122)
chr7 (62-150)||(12110358-12110446)
chr7 (104-152)||(12834944-12834992)
chr7 (64-144)||(39345471-39345551)
chr7 (96-150)||(15740539-15740594)
chr7 (62-205)||(48157049-48157192)
chr7 (96-150)||(15740395-15740449)
chr7 (63-145)||(25130078-25130160)
chr7 (64-150)||(39334193-39334279)
chr7 (102-144)||(39539771-39539813)
chr7 (97-146)||(5628555-5628603)
chr7 (97-150)||(11048060-11048113)
chr7 (117-150)||(43219788-43219821)
chr7 (97-150)||(43250683-43250736)
chr7 (100-208)||(13960650-13960757)
chr7 (118-150)||(28340404-28340436)
chr7 (96-140)||(44990316-44990360)
chr7 (97-145)||(47134746-47134794)
[»] chr6 (33 HSPs)
chr6 (62-150)||(31624088-31624176)
chr6 (63-208)||(32171309-32171454)
chr6 (118-202)||(27857412-27857496)
chr6 (103-150)||(2027390-2027437)
chr6 (118-208)||(8146992-8147082)
chr6 (97-207)||(34939777-34939887)
chr6 (97-150)||(696635-696688)
chr6 (111-144)||(3738116-3738149)
chr6 (97-150)||(28641733-28641786)
chr6 (160-216)||(7351589-7351645)
chr6 (96-150)||(1575782-1575837)
chr6 (110-181)||(1669751-1669822)
chr6 (103-150)||(2034430-2034477)
chr6 (98-189)||(11600819-11600910)
chr6 (96-147)||(17770601-17770652)
chr6 (62-208)||(281774-281920)
chr6 (96-150)||(1575927-1575981)
chr6 (118-208)||(3525178-3525268)
chr6 (97-207)||(7148699-7148809)
chr6 (64-150)||(20368164-20368250)
chr6 (117-150)||(696495-696528)
chr6 (111-208)||(2456989-2457085)
chr6 (62-147)||(4006712-4006797)
chr6 (64-165)||(8183145-8183246)
chr6 (97-202)||(8420129-8420234)
chr6 (97-138)||(9027611-9027652)
chr6 (62-150)||(9093539-9093628)
chr6 (97-150)||(10616697-10616750)
chr6 (118-175)||(32917251-32917308)
chr6 (97-150)||(34404709-34404762)
chr6 (94-150)||(1810289-1810345)
chr6 (118-150)||(31338030-31338062)
chr6 (98-150)||(32577970-32578022)
[»] chr5 (29 HSPs)
chr5 (64-144)||(41957441-41957521)
chr5 (97-176)||(11700336-11700415)
chr5 (97-221)||(11297109-11297233)
chr5 (103-207)||(11457138-11457241)
chr5 (97-145)||(14331400-14331448)
chr5 (97-149)||(17258868-17258920)
chr5 (62-152)||(16889733-16889823)
chr5 (65-150)||(3977309-3977394)
chr5 (131-208)||(5377123-5377200)
chr5 (97-150)||(13604833-13604886)
chr5 (102-215)||(14733808-14733921)
chr5 (101-150)||(21768181-21768230)
chr5 (97-208)||(499657-499768)
chr5 (97-184)||(4619740-4619827)
chr5 (97-144)||(8177522-8177569)
chr5 (121-208)||(25079494-25079580)
chr5 (121-208)||(25137463-25137549)
chr5 (97-150)||(2569679-2569732)
chr5 (97-150)||(3280698-3280751)
chr5 (120-181)||(10152390-10152451)
chr5 (100-145)||(15406001-15406046)
chr5 (103-144)||(17369429-17369470)
chr5 (97-150)||(37611199-37611252)
chr5 (97-150)||(37787929-37787982)
chr5 (62-150)||(39105462-39105551)
chr5 (97-145)||(1899187-1899235)
chr5 (160-216)||(10791090-10791146)
chr5 (110-150)||(14295552-14295592)
chr5 (97-209)||(18853044-18853156)
[»] chr3 (31 HSPs)
chr3 (64-176)||(24624210-24624322)
chr3 (97-222)||(45541604-45541729)
chr3 (64-144)||(1217790-1217870)
chr3 (111-205)||(36646311-36646405)
chr3 (97-150)||(5391912-5391965)
chr3 (103-150)||(27290885-27290932)
chr3 (97-167)||(21574523-21574593)
chr3 (106-148)||(30750042-30750084)
chr3 (64-150)||(39602194-39602280)
chr3 (97-203)||(43115089-43115195)
chr3 (111-208)||(20192532-20192629)
chr3 (97-150)||(34254792-34254845)
chr3 (97-146)||(36101601-36101650)
chr3 (97-146)||(36139911-36139960)
chr3 (97-150)||(39723224-39723277)
chr3 (102-171)||(53762357-53762426)
chr3 (97-149)||(16790364-16790415)
chr3 (64-150)||(21367667-21367754)
chr3 (63-134)||(22214659-22214730)
chr3 (64-150)||(3015827-3015913)
chr3 (98-140)||(26599193-26599235)
chr3 (103-149)||(30923883-30923929)
chr3 (97-175)||(47513686-47513764)
chr3 (117-150)||(39723384-39723417)
chr3 (62-150)||(41724209-41724298)
chr3 (97-150)||(48048966-48049019)
chr3 (103-195)||(50004691-50004784)
chr3 (97-150)||(53952081-53952134)
chr3 (97-149)||(11040599-11040651)
chr3 (97-181)||(37273167-37273251)
chr3 (100-136)||(51130786-51130822)
[»] chr1 (31 HSPs)
chr1 (97-208)||(6292526-6292636)
chr1 (97-150)||(11639400-11639453)
chr1 (97-144)||(26184781-26184828)
chr1 (62-203)||(31517671-31517812)
chr1 (122-191)||(34536216-34536285)
chr1 (100-216)||(4622129-4622245)
chr1 (63-147)||(10744300-10744384)
chr1 (64-208)||(27140478-27140622)
chr1 (62-150)||(44422697-44422785)
chr1 (97-208)||(4868433-4868543)
chr1 (97-208)||(10199334-10199445)
chr1 (124-195)||(12763383-12763454)
chr1 (97-144)||(28689442-28689489)
chr1 (97-215)||(10439719-10439837)
chr1 (111-201)||(32515374-32515464)
chr1 (97-150)||(35925723-35925776)
chr1 (101-145)||(4202140-4202184)
chr1 (97-149)||(11695894-11695946)
chr1 (71-151)||(24460390-24460470)
chr1 (62-150)||(25479579-25479667)
chr1 (62-150)||(29045896-29045984)
chr1 (101-209)||(38170615-38170723)
chr1 (98-150)||(39270409-39270461)
chr1 (99-142)||(1565527-1565570)
chr1 (97-148)||(37593670-37593721)
chr1 (98-148)||(12477273-12477323)
chr1 (117-215)||(27807168-27807266)
chr1 (101-146)||(10854770-10854815)
chr1 (110-203)||(15581300-15581393)
chr1 (110-150)||(17628645-17628685)
chr1 (97-137)||(21002193-21002233)
[»] chr8 (31 HSPs)
chr8 (71-175)||(38307669-38307773)
chr8 (64-175)||(11569416-11569527)
chr8 (97-203)||(30191072-30191178)
chr8 (62-140)||(31705083-31705161)
chr8 (62-150)||(11183543-11183631)
chr8 (71-150)||(12851183-12851262)
chr8 (62-149)||(30389097-30389184)
chr8 (62-140)||(37353243-37353321)
chr8 (103-172)||(14949905-14949974)
chr8 (64-208)||(26410279-26410424)
chr8 (66-150)||(26473736-26473820)
chr8 (118-150)||(29168649-29168681)
chr8 (103-146)||(3254264-3254307)
chr8 (97-208)||(6950355-6950466)
chr8 (97-172)||(12972891-12972966)
chr8 (133-208)||(26499785-26499860)
chr8 (97-148)||(42215292-42215343)
chr8 (64-150)||(11415154-11415240)
chr8 (97-139)||(20672783-20672825)
chr8 (62-208)||(39551135-39551281)
chr8 (127-208)||(2487934-2488015)
chr8 (164-221)||(7008698-7008755)
chr8 (97-150)||(9835884-9835937)
chr8 (97-150)||(10383918-10383971)
chr8 (97-150)||(13459678-13459731)
chr8 (64-145)||(30277234-30277315)
chr8 (121-206)||(37740355-37740440)
chr8 (160-208)||(3634610-3634658)
chr8 (62-150)||(8062327-8062415)
chr8 (97-137)||(9700034-9700074)
chr8 (62-150)||(40071747-40071835)
[»] chr4 (16 HSPs)
chr4 (120-215)||(6428074-6428169)
chr4 (98-192)||(2996607-2996701)
chr4 (111-208)||(7367980-7368077)
chr4 (103-150)||(52754638-52754685)
chr4 (103-206)||(32071907-32072005)
chr4 (98-174)||(21043195-21043271)
chr4 (97-144)||(29467614-29467661)
chr4 (110-140)||(3646673-3646703)
chr4 (97-207)||(33534096-33534206)
chr4 (97-150)||(1137745-1137798)
chr4 (97-138)||(6978958-6978999)
chr4 (97-146)||(8468981-8469030)
chr4 (132-208)||(18628479-18628555)
chr4 (97-141)||(21592999-21593043)
chr4 (110-150)||(27970104-27970144)
chr4 (120-208)||(28615391-28615478)
[»] scaffold0072 (1 HSPs)
scaffold0072 (103-150)||(4998-5045)
[»] scaffold0003 (1 HSPs)
scaffold0003 (71-150)||(306333-306412)


Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 33580445 - 33580695
Alignment:
Q  5 tctagataagcatcttaactaaacagtaaagagtcatgacataattgtttcatgtccgctataagctgttttcacaagctgtccttgatatattatgaaa 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  33580445 tctagataagcatctgaactaaacagtaaagagtcatgacataattgtttcatgtcagctataagctgttttcacaagatgtccttgatatattatgaaa 33580544  T
Q  105 ataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagt 204  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33580545 ataatctgaaagcagcttatggatatgtcataagctgttttcataatccctccagaacagtcttacacgtgcgtatgtcaatagataaacttaaataagt 33580644  T
Q  205 caattgaaacagtctc--tttacctgagcaagtctctttcctgcttcatct 253  Q
    || |||||||||||||  |||||||||||||||||||||||||||||||||    
T  33580645 cagttgaaacagtctctttttacctgagcaagtctctttcctgcttcatct 33580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 43529895 - 43529776
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    |||||||||||| ||||||  |||||||| ||||| ||||||||||||||||||   ||||  |||||| | | |||||| |||  |||||||||| ||     
T  43529895 ttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttataccaatagataagctc 43529796  T
Q  197 aaataagtcaattgaaacag 216  Q
    ||||||||||||| ||||||    
T  43529795 aaataagtcaattcaaacag 43529776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 18179312 - 18179166
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaa 161  Q
    ||||||||||| ||||| ||||| |||| || |  ||| |||||||| ||||||  |||| ||||||||||| |||| ||||||||||| | || |  ||    
T  18179312 gctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggacatgtcttaagatgttttcataaacacttccaaa 18179213  T
Q  162 cagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||  ||||||||||| ||||| | ||||||| |||||||||| ||||    
T  18179212 caaacttacaagtgcttatgtaactagataagcttaaataagccaat 18179166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 18884900 - 18884994
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagata 191  Q
    ||||| ||||||||||||| ||||| ||||| ||||||||||||||||  |||| | ||||  ||||| ||||||||| | ||||||||||||||    
T  18884900 ttatggaaataatctgaaaacagctaatggaaatgtcataagctgtttctataagctctcccaaacagccttacaagttcttatgtcaatagata 18884994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 43985263 - 43985350
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtc 205  Q
    ||||||||||||||||||||| |||||   ||||| |||   |||||| |||||||||  ||||||| ||||||||||||||||||||    
T  43985263 agcttatggacatgtcataagttgtttcagtaatctctctcaaacagttttacaagtgtttatgtcagtagataaacttaaataagtc 43985350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 44606147 - 44606037
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa-tccctccagaacagtcttacaagtgcgtatgtcaatagataaact 195  Q
    |||||||||| | |||||| || ||||||||||||||||||| ||||||||||| | | |||| ||||||| ||||||| | |||||||||| | | |||    
T  44606147 ttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataagttcttcca-aacagtcgtacaagtacttatgtcaatataaacact 44606049  T
Q  196 taaataagtcaa 207  Q
     |||||||||||    
T  44606048 caaataagtcaa 44606037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 787373 - 787418
Alignment:
Q  105 ataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||    
T  787373 ataagctgaaaacagcttatggacatgtcataagctgttttcataa 787418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 5759647 - 5759505
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaag-cagcttatggacatgtcataagctgttttcataatccctccaga 160  Q
    ||||||||||||||||| ||||| | || ||    || ||||||||| ||||||  || |||||||||||||| |||||||||| ||||| | ||||  |    
T  5759647 gctataagctgttttcataagctattctggagggtttgtgaaaataagctgaaacacaacttatggacatgtc-taagctgtttccataagctctcccaa 5759549  T
Q  161 acagtcttacaagtgcgtatgtcaatagataaacttaaataagt 204  Q
    ||||||| |||||| | |||  ||||||||||||| ||||||||    
T  5759548 acagtctcacaagtacttataccaatagataaactcaaataagt 5759505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 1494480 - 1494430
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||| || ||| ||| ||||||||||||||||||||||||||||||    
T  1494480 tgaaaataagctaaaaacagtttatggacatgtcataagctgttttcataa 1494430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 9595291 - 9595409
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    |||||||||||| ||||||  || | |||||||||||||||| ||||||||||| | || |  ||  ||||||||||||   ||||||  |||||||||     
T  9595291 ttatgaaaataagctgaaaatagttcatggacatgtcataagatgttttcataaactcttctaaatggtcttacaagtgacaatgtcagcagataaactc 9595390  T
Q  197 aaataagtcaattgaaaca 215  Q
    |||||| |||||| |||||    
T  9595391 aaataaatcaattcaaaca 9595409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 1647269 - 1647322
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| |||||| |||||| |||||||||  |||||||||||||||||||||||    
T  1647269 ttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataa 1647322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 680539 - 680591
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatc 152  Q
    ||||||||| |||||| ||| ||||  ||||||||||||||||||||||||||    
T  680539 tgaaaataagctgaaaacagtttataaacatgtcataagctgttttcataatc 680591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 9556237 - 9556325
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||| ||||||||| ||||| |||| || |  ||||||||||||  ||||| |  |||||||||||||||| || |||||||||||    
T  9556237 gctataaactgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtcattagttgttttcataa 9556325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 33256774 - 33256826
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||| |||| | ||| ||||| ||||||||||||||||||||||||    
T  33256774 tatgaaaataagctgagaacagtttatgaacatgtcataagctgttttcataa 33256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 36677722 - 36677793
Alignment:
Q  134 ataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtc-aatagataaacttaaataagt 204  Q
    ||||||||||||||||| | |||  ||| ||||| |||||||| |||||| |||||||||||| ||||||||    
T  36677722 ataagctgttttcataagctctcttgaatagtctcacaagtgcttatgtcaaatagataaactcaaataagt 36677793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 40943977 - 40944052
Alignment:
Q  128 catgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataag 203  Q
    ||||||||||||||||||||||| |  | |  |||||| | |||||||| ||||||| |||||||||| |||||||    
T  40943977 catgtcataagctgttttcataaacttttccaaacagtttcacaagtgcttatgtcattagataaactcaaataag 40944052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 1318290 - 1318387
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaattgaaacag 216  Q
    ||||| ||||||||||||||| ||||||||||| | |||   |||||||| |||||||| |||| || ||||||| || |||| | |||||| ||||||    
T  1318290 agcttctggacatgtcataagatgttttcataagctctcacaaacagtctcacaagtgcttatg-cagtagataatctcaaattactcaattcaaacag 1318387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 4350726 - 4350776
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||| || ||| ||| ||||| ||||||||||||||||||||||||    
T  4350726 tgaaaataacctaaaatcagtttatgaacatgtcataagctgttttcataa 4350776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 5133805 - 5133863
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccct 155  Q
    ||||| |||||| ||||||| ||||||||  ||||||||||| |||||| |||||||||    
T  5133805 ttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttttataatccct 5133863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 13234528 - 13234634
Alignment:
Q  86 tccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaa 185  Q
    |||||||||  ||||||| ||||  ||||| || ||||||||||||||||||  ||||||  ||| | |||   ||||||||||||||||| |||| |||    
T  13234528 tccttgatagcttatgaagataagttgaaaacaacttatggacatgtcataatgtgtttttgtaagcactctcaaacagtcttacaagtgcttatgccaa 13234627  T
Q  186 tagataa 192  Q
    | |||||    
T  13234628 ttgataa 13234634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 32821807 - 32821889
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||||| ||||||||| ||||| ||||  | |  ||||  |||||| |||||| |||||||||||||||||||||| |||||    
T  32821807 gctataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgttt 32821889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 33192206 - 33192288
Alignment:
Q  68 agctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| ||||| ||||| |||| || |  |||| || |||| |||||| ||||||||||| ||||||||| ||||||||||||    
T  33192206 agctggtttcataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataa 33192288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 44438908 - 44438826
Alignment:
Q  65 ataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttca 147  Q
    ||||||||| |||| ||| | |||| || || || || |||||| |||||| ||| ||||| |||||||||||||||||||||    
T  44438908 ataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgttttca 44438826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 10285893 - 10285946
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| ||||||  ||||| |||||||||||||||||||||| | |||||||||    
T  10285893 ttatggaaataagttgaaaacagcttatggacatgtcataagttattttcataa 10285946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 10567093 - 10567182
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaataga 189  Q
    ||||||| | |||||| || ||||||  ||||||||||||||||| || |||| ||||  |||||||| || ||| | ||||||||||||    
T  10567093 tgaaaattagctgaaaacaacttatgatcatgtcataagctgtttccacaatctctcccaaacagtctcacgagtacttatgtcaataga 10567182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 12313210 - 12313157
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||  ||||| || |||||| ||||| ||||||||||||||||||    
T  12313210 ttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataa 12313157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 29430807 - 29430844
Alignment:
Q  113 aaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  29430807 aaagcagctaatggacatgtcataagctattttcataa 29430844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 32106836 - 32106783
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||| ||||| ||||| |||||||  || ||||||||||||||||||||||    
T  32106836 ttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataa 32106783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 33941942 - 33941995
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||  ||||||||||||||| || ||||||||| |||||||||||    
T  33941942 ttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataa 33941995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 35379053 - 35379000
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||| |||||| || |||||| ||| ||||| ||||||||||||||    
T  35379053 ttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataa 35379000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 37276803 - 37276885
Alignment:
Q  121 ttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtc 205  Q
    ||||| |||||||||||||| |||  |||  ||||||  |||||||| |||||||| ||| | | ||||||||||||||||||||    
T  37276803 ttatgaacatgtcataagctatttctata--ccctcccaaacagtctcacaagtgcttatattagtagataaacttaaataagtc 37276885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 1801722 - 1801754
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataa 150  Q
    |||||||| ||||||||||||||||||||||||    
T  1801722 agcttatgaacatgtcataagctgttttcataa 1801754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 5902573 - 5902533
Alignment:
Q  110 ctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  5902573 ctgaaaacagtttatgaacatgtcataagctgttttcataa 5902533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 10285392 - 10285428
Alignment:
Q  101 gaaaataatctgaaagcagcttatggacatgtcataa 137  Q
    |||||||| |||||| |||||||||||||||||||||    
T  10285392 gaaaataagctgaaaacagcttatggacatgtcataa 10285428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 12215805 - 12215893
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||| | ||||  ||||||| |  |||||  ||||   ||||| |||||||||||||||||||||||| ||| |||||    
T  12215805 gctataagctgtttttataagccatccttgagagcttatgggaatatggtgaaaacagcttatggacatgtcataagctatttccataa 12215893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 14451081 - 14451037
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttca 147  Q
    |||||| |||||| |||||||||| ||||||||||| ||||||||    
T  14451081 aaataagctgaaaacagcttatggtcatgtcataagttgttttca 14451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 14845030 - 14844998
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataa 150  Q
    |||||| ||||||||||||||||||||||||||    
T  14845030 agcttacggacatgtcataagctgttttcataa 14844998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 16398488 - 16398456
Alignment:
Q  117 cagcttatggacatgtcataagctgttttcata 149  Q
    |||||||||||||||||||||| ||||||||||    
T  16398488 cagcttatggacatgtcataagttgttttcata 16398456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 17775503 - 17775396
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataag-ctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaact 195  Q
    |||||||||||| |||||| ||||||| | | |||||||||  |||||||||||| |||||   |||||||||| ||| || ||||||| ||||||  ||    
T  17775503 ttatgaaaataagctgaaaacagcttaagaa-atgtcataaaactgttttcataaaccctctcaaacagtcttaaaagagcttatgtcagtagatatgct 17775405  T
Q  196 taaataagt 204  Q
     ||||||||    
T  17775404 caaataagt 17775396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 37518874 - 37518842
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||| |||||||||||||||||||    
T  37518874 agcttatggacatttcataagctgttttcataa 37518842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 28691898 - 28691762
Alignment:
Q  71 tgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttac 170  Q
    |||||||| ||||| |||| || || |||||||||||| |||| | ||  ||||||||| ||||||||||||||||||||   |||| ||||||||| ||    
T  28691898 tgttttcataagctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatctcc-gaacagtctcac 28691800  T
Q  171 aagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    || ||| ||||| |  ||||||||| ||||||||||||    
T  28691799 aaatgcttatgttagcagataaactcaaataagtcaat 28691762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 20553101 - 20553220
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaa 161  Q
    |||||||| |||||||||||| | |||| |  |  ||||| ||||||||||||| || |||||| ||||||| |||||||||| ||||| | |||| |||    
T  20553101 gctataagttgttttcacaagttatcctagtgagcttatggaaataatctgaaaacaacttatgaacatgtcgtaagctgtttccataagctctcctgaa 20553200  T
Q  162 cagtcttacaagtgcgtatg 181  Q
    |||||| |||||||| ||||    
T  20553201 cagtctcacaagtgcttatg 20553220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 30535597 - 30535715
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactta 197  Q
    ||||||||||| |||||| ||||||| | |||| ||||||| |||||||||||   ||||| ||||||||  ||||||  ||||||| || || |||| |    
T  30535597 tatgaaaataacctgaaaacagcttacgaacatatcataagttgttttcataagttctccaaaacagtctctcaagtgtttatgtcagtaaattaactca 30535696  T
Q  198 aataagtcaattgaaacag 216  Q
    |||||||||||| ||||||    
T  30535697 aataagtcaattcaaacag 30535715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 33894666 - 33894766
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataa 202  Q
    |||||| |||||| || ||||||||||||||||| ||||||||||||| | |||   |||||||| |||||||| ||||||| | ||||| || ||||||    
T  33894666 aaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgtcatttgataagctcaaataa 33894765  T
Q  203 g 203  Q
    |    
T  33894766 g 33894766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 44615176 - 44615063
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaa 161  Q
    ||||||| ||||||||| ||| |  |||||| |  ||||| ||||||  ||||| |||||| ||||||||||||||| ||||||||||| | |||| |||    
T  44615176 gctataaactgttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctcctgaa 44615077  T
Q  162 cagtcttacaagtg 175  Q
    |||| || ||||||    
T  44615076 cagttttgcaagtg 44615063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 19624267 - 19624320
Alignment:
Q  154 ctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaa 207  Q
    |||| ||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  19624267 ctcccgaacagtttcacaagtgcttatgtcaatagataaactcaaataagtcaa 19624320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 43219681 - 43219628
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||    
T  43219681 ttatgagaataagctgaaaacagcttatgaacatgtcataagctgttttgataa 43219628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 44808191 - 44808244
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||| |||||| ||| |||||||||||||||||| | |||||||||    
T  44808191 ttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataa 44808244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 46082069 - 46082122
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||| |||||| || ||||||| ||||||||||| |||||||||||    
T  46082069 ttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataa 46082122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 12110358 - 12110446
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||||| ||||| || |  | |  ||||||||||||||| ||| ||| || || |||||||||||| |||||||||||    
T  12110358 gctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataagttgttttcataa 12110446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 12834992 - 12834944
Alignment:
Q  104 aataatctgaaagcagcttatggacatgtcataagctgttttcataatc 152  Q
    ||||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  12834992 aataagctgaaaacagtttatggacatgtcataagctgtttccataatc 12834944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 39345471 - 39345551
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||||||||||||| ||||| ||||    |  ||||| |||||| ||||||||| |||||||||||||||||| ||||||    
T  39345471 tataagctgttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataaactgttt 39345551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 15740594 - 15740539
Alignment:
Q  96 attatgaaaataatctgaaagcagcttatggacatg-tcataagctgttttcataa 150  Q
    |||||||||||||  ||||| || |||||||||||| |||||||||||||||||||    
T  15740594 attatgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataa 15740539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 48157192 - 48157049
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaa 161  Q
    |||||||  |||||||||||||| | |  || || ||||| |||||| |||||| ||||||||||||||| |||||| |||||  |||| | ||||  ||    
T  48157192 gctataatttgttttcacaagctattcgggagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaa 48157093  T
Q  162 cagtcttacaagtgcgtatgtcaatagataaacttaaataagtc 205  Q
    |||||| |||| ||| ||  ||| || |||| || |||||||||    
T  48157092 cagtctcacaaatgcttaaatcagtaaataagctcaaataagtc 48157049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 15740449 - 15740395
Alignment:
Q  96 attatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||||  | ||| ||||||||| |||||||||||| |||||||||||    
T  15740449 attatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataa 15740395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 25130160 - 25130078
Alignment:
Q  63 ctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgtttt 145  Q
    |||||||||||||||| ||||| || | || |  || ||||||||  |||||| ||||||||| ||||||||||| |||||||    
T  25130160 ctataagctgttttcaaaagctatcttggaaaatttctgaaaatatgctgaaaacagcttatgaacatgtcataaactgtttt 25130078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 39334193 - 39334279
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||| ||||| |||| |  |  ||||| |||||| ||||| ||| ||||||||||||||||||  ||||| |||||    
T  39334193 tataagctgttttcaaaagctatcctggcgagcttatggaaataagctgaatgcaacttatggacatgtcataaattgtttccataa 39334279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 39539813 - 39539771
Alignment:
Q  102 aaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||||| |||||| |||||||||||||||||||||| |||||    
T  39539813 aaaataagctgaaaacagcttatggacatgtcataagttgttt 39539771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 5628603 - 5628555
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttc 146  Q
    |||||||||||| |||||| |||||||| |||||||||||| ||||||||    
T  5628603 ttatgaaaataagctgaaa-cagcttatagacatgtcataaactgttttc 5628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 11048060 - 11048113
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| ||||| |||||| ||||||||| |||||||||||| |||||| ||||    
T  11048060 ttatgagaataagctgaaaacagcttatgaacatgtcataagttgttttgataa 11048113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 43219821 - 43219788
Alignment:
Q  117 cagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||| ||||||||||||||||||||||||    
T  43219821 cagcttatgaacatgtcataagctgttttcataa 43219788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 43250736 - 43250683
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||| |||| |||||| || |||| | ||||||||||||||||||||||||    
T  43250736 ttatgaatataaactgaaaacaacttacgaacatgtcataagctgttttcataa 43250683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 13960757 - 13960650
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaa 199  Q
    ||||||||| |||||   ||||||||||| ||| ||||||||||||||||| | |||   || |||||  ||||||| |||| |||| ||||| || |||    
T  13960757 tgaaaataagctgaacatagcttatggacttgttataagctgttttcataagctctctcaaatagtctcgcaagtgcttatg-caatggataagctcaaa 13960659  T
Q  200 taagtcaat 208  Q
    |||||||||    
T  13960658 taagtcaat 13960650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 28340436 - 28340404
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||||||||| |||||||||||    
T  28340436 agcttatggacatgtcataagttgttttcataa 28340404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 44990360 - 44990316
Alignment:
Q  96 attatgaaaataatctgaaagcagcttatggacatgtcataagct 140  Q
    |||||||||||||  |||||||| ||||||||| |||||||||||    
T  44990360 attatgaaaataagttgaaagcaacttatggacctgtcataagct 44990316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 47134794 - 47134746
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgtttt 145  Q
    |||||||||||| |||||| || ||||||||| ||||||||| ||||||    
T  47134794 ttatgaaaataagctgaaaacaacttatggacgtgtcataagttgtttt 47134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 31624088 - 31624176
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||||| | ||| || | || | |||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||    
T  31624088 gctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 31624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 208
Target Start/End: Complemental strand, 32171454 - 32171309
Alignment:
Q  63 ctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaac 162  Q
    |||| |||||||||||  || | |||| ||||  ||||| |||||| ||||||  ||||| ||||| ||||||||||||||||||||| | |||   |||    
T  32171454 ctatgagctgttttcattagttatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaac 32171355  T
Q  163 agtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||||  ||||||| ||||||||||  ||| || ||||||| ||||    
T  32171354 agtctcgcaagtgcttatgtcaatacttaagctgaaataagacaat 32171309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 27857412 - 27857496
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataa 202  Q
    |||||||||| |||||||||| ||||||||||| | ||||  |||||| | |||||||  ||||||| |||||||||| ||||||    
T  27857412 agcttatggagatgtcataagttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataaactcaaataa 27857496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 2027437 - 2027390
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  2027437 aaataagctgaaaacagcttatggaaatgtcataagctgttttcataa 2027390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 8147082 - 8146992
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||||||| | |||| ||||| ||||||||||| | ||    |||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  8147082 agcttatgcatatgttataagttgttttcataagctctttgaaacagtctaacaagtggttatgtcaataggtaaacttaaataagtcaat 8146992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 34939777 - 34939887
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| |||||| |||||| ||  |||||||||||||||||||||||| | ||| | ||||| |||||| | |||| ||  ||||||| ||||||| ||     
T  34939777 ttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaaatgtttatgtcactagataagctg 34939876  T
Q  197 aaataagtcaa 207  Q
    ||||| |||||    
T  34939877 aaatacgtcaa 34939887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 696635 - 696688
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||    
T  696635 ttatgagaataagctgaaaacagcttatgaacatgtcataagctgttttgataa 696688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 3738116 - 3738149
Alignment:
Q  111 tgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||||||||||||||||||||||||||||||||    
T  3738116 tgaaagcagcttatggacatgtcataagctgttt 3738149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 28641786 - 28641733
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||| || ||| ||||||||| |||||| |||||||||||||||||    
T  28641786 ttatgaaaataagctaaaaacagcttatgaacatgttataagctgttttcataa 28641733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 7351645 - 7351589
Alignment:
Q  160 aacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaattgaaacag 216  Q
    |||| ||| |||||||| ||||||| |||||||||| ||||||||||||| ||||||    
T  7351645 aacaatctcacaagtgcttatgtcagtagataaactcaaataagtcaatttaaacag 7351589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 1575782 - 1575837
Alignment:
Q  96 attatgaaaataatctgaaagcagcttatggacatg-tcataagctgttttcataa 150  Q
    |||||||||||||  ||||| || |||||||||||| |||||||||||||||||||    
T  1575782 attatgaaaataagttgaaaacaccttatggacatgttcataagctgttttcataa 1575837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 1669822 - 1669751
Alignment:
Q  110 ctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatg 181  Q
    |||||| |||||||| ||||||||||||| ||||||||||| | ||||  |  |||||||||||||| ||||    
T  1669822 ctgaaaacagcttatagacatgtcataagttgttttcataagctctcccaattagtcttacaagtgcatatg 1669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 2034477 - 2034430
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||| ||||||||||| |||||||||||||||| |||||    
T  2034477 aaataagctgaaaacagcttatggaaatgtcataagctgtttccataa 2034430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 11600910 - 11600819
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaataga 189  Q
    ||||||||||| ||||||  || || |||||||||||||||||||||||| || | || || ||||| || |||||||  ||||||| ||||    
T  11600910 tatgaaaataagctgaaaatagtttttggacatgtcataagctgttttcaaaaactctacaaaacagcctcacaagtgtttatgtcagtaga 11600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 17770652 - 17770601
Alignment:
Q  96 attatgaaaataatctgaaagcagcttatggacatgtcataagctgttttca 147  Q
    ||||| |||||||  |||||||| |||||| |||||||||||||||||||||    
T  17770652 attataaaaataagttgaaagcaccttatgaacatgtcataagctgttttca 17770601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 281920 - 281774
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaa 161  Q
    |||||||||||| |||| ||||| |||| || |  | ||| |||||| |||||| || ||||| ||||||||||||| || || ||| | | ||||  ||    
T  281920 gctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctctcccaaa 281821  T
Q  162 cagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||||| |||||| | ||||||| || |||| || || |||||||||    
T  281820 cagtctcacaagtacttatgtcactacataatctcaagtaagtcaat 281774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 1575927 - 1575981
Alignment:
Q  96 attatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||||  | ||| ||||||||| |||||||||||| |||||||||||    
T  1575927 attatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataa 1575981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 3525178 - 3525268
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||||||||||||||||||| || ||| ||||| | || | ||||||||  |  ||| | ||||||| ||||||||||||||| |||||||    
T  3525178 agcttatggacatgtcataaactatttccataaactcttccgaacagtcacaagagtacttatgtcactagataaacttaaattagtcaat 3525268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 7148699 - 7148809
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||||||||||  |||||  |||||||||||| |||||||| ||||| | ||| | || | ||||| ||| |||||||| ||||  | ||||||| ||     
T  7148699 ttatgaaaataagttgaaaatagcttatggacaagtcataagttgtttccgtaagctctgctgaacactctcacaagtgcttatgcgactagataagctc 7148798  T
Q  197 aaataagtcaa 207  Q
    |||||||||||    
T  7148799 aaataagtcaa 7148809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 20368250 - 20368164
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||||| ||||| || | || |  ||||||||||||  |||||  |||||||| |||||||||||| |||||||||||    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataa 20368164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 696495 - 696528
Alignment:
Q  117 cagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||| ||||||||||||||||||||||||    
T  696495 cagcttatgaacatgtcataagctgttttcataa 696528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 2456989 - 2457085
Alignment:
Q  111 tgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||||| |||||||||||||| | |||||||| || || ||   ||||| ||||||||||||||||| ||||||  ||||||| || ||||||| ||||    
T  2456989 tgaaaacagcttatggacatattataagctgcttccacaagtgctcca-aacagtcttacaagtgcttatgtcggtagataatctcaaataagccaat 2457085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 4006712 - 4006797
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttca 147  Q
    |||||||| |||||||| ||||| ||| ||| |  |||||||||||| ||||||  | ||||||||||| || |||| ||||||||    
T  4006712 gctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacatatcgtaagttgttttca 4006797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 8183145 - 8183246
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaaca 163  Q
    |||||| |||||||||||||| | || || |  ||||||||| |  || ||| ||||||||| |||| || |||||||||||||||| | |||| |||||    
T  8183145 tataagttgttttcacaagctattctagaaagcttatgaaaacaggctaaaaacagcttatgaacatttcgtaagctgttttcataagctctccggaaca 8183244  T
Q  164 gt 165  Q
    ||    
T  8183245 gt 8183246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 8420234 - 8420129
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| ||||||  |||||  ||||| ||||||||||||||||| |||  |||| | |||   |||||||| |||||||  ||||||||||||||| ||     
T  8420234 ttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagataagctc 8420135  T
Q  197 aaataa 202  Q
    ||||||    
T  8420134 aaataa 8420129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 9027611 - 9027652
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataag 138  Q
    |||||||||||| |||||| || |||||||||||||||||||    
T  9027611 ttatgaaaataagctgaaaacaacttatggacatgtcataag 9027652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 9093628 - 9093539
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggac-atgtcataagctgttttcataa 150  Q
    ||||||||||||||||| |||||||| | || |  ||| |||||||| |||||| ||| ||||  || |||||||||||| |||||||||    
T  9093628 gctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagctattttcataa 9093539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 10616750 - 10616697
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||| ||||||| |||||| ||||||||| |||||||||||| |||||| ||||    
T  10616750 ttataaaaataaactgaaaacagcttatgaacatgtcataaggtgttttgataa 10616697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 32917251 - 32917308
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtg 175  Q
    ||||||||||||||||||||| ||||| ||||| | ||||  |||||||| |||||||    
T  32917251 agcttatggacatgtcataagttgtttccataagctctcccaaacagtctcacaagtg 32917308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 34404762 - 34404709
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||  |||||| ||||||||| |||||||||||| | |||||||||    
T  34404762 ttatgaaaatatgctgaaaacagcttatgtacatgtcataagatattttcataa 34404709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 1810345 - 1810289
Alignment:
Q  94 atattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||| ||| |||||| |||||||||||||||||||||| ||| || |||||| ||||    
T  1810345 atatcatggaaataagctgaaagcagcttatggacatgccattagttgttttaataa 1810289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 31338030 - 31338062
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||||||||| |||||||||||    
T  31338030 agcttatggacatgtcataagttgttttcataa 31338062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 32578022 - 32577970
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||| |||||| |||||| ||||| | |||||||||||||| |||||||||||    
T  32578022 tatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataa 32577970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 41957521 - 41957441
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||||||||||||| ||||| ||||||| |  ||||||||||||  ||||| || |||||||||||||||||||||||||    
T  41957521 tataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgttt 41957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 11700415 - 11700336
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgc 176  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| | ||||  || ||||| ||||||||    
T  11700415 ttatgaaaataatctgaaaacagcttatggacatgtcataagttgtttccataaactctcctcaatagtctcacaagtgc 11700336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 11297233 - 11297109
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    |||||||||||| ||||||  |||| || |||||||| |||| ||||| ||||| | ||    ||||||||||||||||  |||| || ||||||| |||    
T  11297233 ttatgaaaataagctgaaaatagctaattgacatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  197 aaataagtcaattgaaacagtctct 221  Q
    ||||||||||||| |||||| ||||    
T  11297133 aaataagtcaattcaaacagactct 11297109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 207
Target Start/End: Original strand, 11457138 - 11457241
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataa 202  Q
    ||||||| ||||| |||||||||||||||||||||| ||||| ||||| | || || |||||||| |||||||  | || |||||||||| || ||||||    
T  11457138 aaataatatgaaa-cagcttatggacatgtcataagttgtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataa 11457236  T
Q  203 gtcaa 207  Q
    |||||    
T  11457237 gtcaa 11457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 14331400 - 14331448
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgtttt 145  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  14331400 ttatgaaaataagctgaaatcagcttatggacatgtcataagctgtttt 14331448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 17258920 - 17258868
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcata 149  Q
    |||||||||||| |||||| ||||||||| |||||||||||||| ||||||||    
T  17258920 ttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcata 17258868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 16889733 - 16889823
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatc 152  Q
    ||||||||||||||||| ||||| | || || |  ||||| ||||||||||||| || ||||| |||||   |||||||||||||||||||    
T  16889733 gctataagctgttttcataagctatgctagagagtttatggaaataatctgaaaacaacttatagacatagtataagctgttttcataatc 16889823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 3977309 - 3977394
Alignment:
Q  65 ataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||||| ||| |||  | || | ||||||||||||| |||||  ||||| | | ||||||||||||||||||||||||    
T  3977309 ataagctgttttcataagttgttgtggagaaattatgaaaataagctgaagacagctaaggaacatgtcataagctgttttcataa 3977394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 5377200 - 5377123
Alignment:
Q  131 gtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||||||||||||||||||||    ||   ||||||||||||||||| ||||||||||||||| || ||||||| ||||    
T  5377200 gtcataagctgttttcataagttatcgctaacagtcttacaagtgcttatgtcaatagataagctcaaataagccaat 5377123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 13604886 - 13604833
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||  ||||| || | |||||||||||||||||||||||||||||    
T  13604886 ttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataa 13604833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 14733808 - 14733921
Alignment:
Q  102 aaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaata 201  Q
    ||||||| |||||||||| ||||  |||||||||||  || |||||||||| ||    |||| | |||||||||| ||| ||||||| ||| ||||||||    
T  14733808 aaaataaactgaaagcagtttatcaacatgtcataaaatgatttcataatctctttcaaacaattttacaagtgcttatatcaataggtaatcttaaata 14733907  T
Q  202 agtcaattgaaaca 215  Q
    ||| |||| |||||    
T  14733908 agttaatttaaaca 14733921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 21768230 - 21768181
Alignment:
Q  101 gaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||  ||||| |||| |||||||||||||||||||||||||||||    
T  21768230 gaaaataagttgaaaacagcgtatggacatgtcataagctgttttcataa 21768181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 499768 - 499657
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| |||||| |||||| || ||| |  ||||||||||||||||||||||||   ||||  ||||| || ||| |||| ||||||| ||| ||| ||     
T  499768 ttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacagcctaacaggtgcttatgtcagtaggtaagctc 499669  T
Q  197 aaataagtcaat 208  Q
    ||||||||||||    
T  499668 aaataagtcaat 499657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 4619740 - 4619827
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtca 184  Q
    ||||| ||||||  ||||| ||||||||| ||||||||| || ||||||||||| | ||||  |||||| || ||||||| |||||||    
T  4619740 ttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaacagtgttgcaagtgcttatgtca 4619827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 8177569 - 8177522
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    |||||||||||| |||||| || ||||||||||| |||||||||||||    
T  8177569 ttatgaaaataacctgaaaacaacttatggacatatcataagctgttt 8177522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 25079580 - 25079494
Alignment:
Q  121 ttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||| ||||||||||||| |||||  |||| | ||||| || ||||| |||||||| ||||||  |||||| ||||||||||||||||    
T  25079580 ttatagacatgtcataagttgtttcgataaactctcca-aatagtctcacaagtgcttatgtccgtagatacacttaaataagtcaat 25079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 25137549 - 25137463
Alignment:
Q  121 ttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||| ||||||||||||| |||||  |||| | ||||| || ||||| |||||||| ||||||  |||||| ||||||||||||||||    
T  25137549 ttatagacatgtcataagttgtttcgataaactctcca-aatagtctcacaagtgcttatgtccgtagatacacttaaataagtcaat 25137463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 2569732 - 2569679
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||| |||| || ||| |||||||||||||||||||||||| ||| |||||    
T  2569732 ttatgaatataaacttaaaacagcttatggacatgtcataagctatttccataa 2569679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 3280751 - 3280698
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||| || |||  |||||||| | ||||||||||||||||||||||    
T  3280751 ttatgaaaataaactaaaaagagcttatgaagatgtcataagctgttttcataa 3280698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 10152390 - 10152451
Alignment:
Q  120 cttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatg 181  Q
    ||||||||||||||||||| ||||||||||| | ||||| || ||||| ||| |||| ||||    
T  10152390 cttatggacatgtcataagttgttttcataagctctccaaaatagtctcacatgtgcttatg 10152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 15406046 - 15406001
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcataagctgtttt 145  Q
    |||||||||  ||||| ||||||||| |||||||||||||||||||    
T  15406046 tgaaaataaattgaaaacagcttatgaacatgtcataagctgtttt 15406001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 17369470 - 17369429
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  17369470 aaataatctgaaaacaacttatagacatgtcataagctgttt 17369429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 37611252 - 37611199
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| |||||| |||||| ||||||||| |||||||| ||| |||||||||||    
T  37611252 ttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataa 37611199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 37787982 - 37787929
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| |||||| |||||| ||||||||| |||||||| ||| |||||||||||    
T  37787982 ttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataa 37787929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 39105462 - 39105551
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggaca-tgtcataagctgttttcataa 150  Q
    ||||||| ||||||||| ||||| || | || |  |||||||||||| || |||  |||||||| ||| |||||||||||||||||||||    
T  39105462 gctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataa 39105551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 1899187 - 1899235
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgtttt 145  Q
    ||||| |||||| |||||| || |||||| |||||||||||||||||||    
T  1899187 ttatggaaataagctgaaaacaacttatgcacatgtcataagctgtttt 1899235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 10791090 - 10791146
Alignment:
Q  160 aacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaattgaaacag 216  Q
    |||||||| |||||| | ||||||||| ||||| || ||||||||||||| ||||||    
T  10791090 aacagtctcacaagtacttatgtcaattgataagctgaaataagtcaattcaaacag 10791146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 14295552 - 14295592
Alignment:
Q  110 ctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||||| ||||| |||||||||||||||||||    
T  14295552 ctgaaaacagcttatcgacatatcataagctgttttcataa 14295592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 18853044 - 18853156
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| |||||| || ||| ||||| || | |||||| ||||||||||||||||   ||||  || ||||| ||||||||  ||||||  |||||| |||    
T  18853044 ttatggaaataagctaaaaacagctaataggcatgtcgtaagctgttttcataacttctcctaaaaagtctcacaagtgctgatgtcagcagataagctt 18853143  T
Q  197 aaataagtcaatt 209  Q
    ||| |||||||||    
T  18853144 aaacaagtcaatt 18853156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 24624210 - 24624322
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaaca 163  Q
    |||||| |||||||| | ||| |||| || || |||||  ||||| |||||| ||| |||||||||||||||||||||||||||||| | || |  ||||    
T  24624210 tataagatgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaaca 24624309  T
Q  164 gtcttacaagtgc 176  Q
    |||||||||||||    
T  24624310 gtcttacaagtgc 24624322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 45541604 - 45541729
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    |||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||   || |  ||||||||||||||||  |||  || || |||| ||     
T  45541604 ttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctc 45541703  T
Q  197 aaataagtcaattgaaacagtctctt 222  Q
    ||||||||||||  |||||| |||||    
T  45541704 aaataagtcaatccaaacaggctctt 45541729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 1217870 - 1217790
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||||||||||||| ||||| ||||||| |  |||||||| |||  ||||| || |||||||||||||||||||||||||    
T  1217870 tataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgttt 1217790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 36646405 - 36646311
Alignment:
Q  111 tgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtc 205  Q
    ||||| ||||||||||||||| ||||||  |||| ||||| | ||||  || |||||||||||||| |||| |||||||||  ||||||||||||    
T  36646405 tgaaaacagcttatggacatgccataagtggtttccataagctctcccaaatagtcttacaagtgcctatgccaatagatatgcttaaataagtc 36646311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 5391912 - 5391965
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||    
T  5391912 ttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 5391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 27290932 - 27290885
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||||    
T  27290932 aaataagctgaaaacagcttatgggcatgtcataagctgttttcataa 27290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 21574523 - 21574593
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtct 167  Q
    ||||| |||||| || ||||||||||||| |||||||||||| ||||||||||| | ||||  ||||||||    
T  21574523 ttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtct 21574593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 30750042 - 30750084
Alignment:
Q  106 taatctgaaagcagcttatggacatgtcataagctgttttcat 148  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  30750042 taatctgaaaacagcttatggacatgtcataagttgttttcat 30750084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 39602280 - 39602194
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||| ||||| || |||| |  ||||||||||||  ||||| ||  ||||| |||||||||||||||| |||||||    
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataa 39602194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 203
Target Start/End: Original strand, 43115089 - 43115195
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| |||||| |||||| ||  |||||||||||||||||| ||||| ||||| | || |  |||| ||| |||||||  ||||||||||||||| |||    
T  43115089 ttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattatgtcaatagataacctt 43115188  T
Q  197 aaataag 203  Q
    | |||||    
T  43115189 atataag 43115195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 20192629 - 20192532
Alignment:
Q  111 tgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||||| ||||||||||||||||||||||||||||  |||| | |||    ||||| | | |||||| |||||||||||||||| | |||| |||||||    
T  20192629 tgaaaacagcttatggacatgtcataagctgtttctataagctctctcatacagtgtaagaagtgcttatgtcaatagataaattgaaattagtcaat 20192532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 34254845 - 34254792
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| |||||| ||||||| |||||||||| ||||||||| ||||||||||||    
T  34254845 ttatgtaaataagctgaaagtagcttatggatatgtcataaactgttttcataa 34254792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 36101601 - 36101650
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttc 146  Q
    |||||||||||| |||||| |||||| || ||||||||||||||||||||    
T  36101601 ttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36101650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 36139911 - 36139960
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttc 146  Q
    |||||||||||| |||||| |||||| || ||||||||||||||||||||    
T  36139911 ttatgaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 36139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 39723277 - 39723224
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| ||||| |||||| ||||||||| ||||||||||||||||||| ||||    
T  39723277 ttatgagaataagctgaaaacagcttatgaacatgtcataagctgttttgataa 39723224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 53762426 - 53762357
Alignment:
Q  102 aaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttaca 171  Q
    |||||||  ||||| ||||||||| ||||||||||||||||||||| |||  ||||  ||||||||||||    
T  53762426 aaaataagttgaaaacagcttatgaacatgtcataagctgttttcaaaatttctccctaacagtcttaca 53762357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 16790415 - 16790364
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcata 149  Q
    |||||||||||| |||||| |||||||||||| ||||||||||| ||||||||    
T  16790415 ttatgaaaataaactgaaaacagcttatggac-tgtcataagctattttcata 16790364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 21367667 - 21367754
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggaca-tgtcataagctgttttcataa 150  Q
    |||||| |||||||| ||||| || | || |  |||||||||||| |||||| |||||| || ||| |||||||||||||||||||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataa 21367754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 22214730 - 22214659
Alignment:
Q  63 ctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtca 134  Q
    ||||||| |||||||| ||||| |||| || | |||| | |||||| |||||| ||||||||||||||||||    
T  22214730 ctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtca 22214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 3015913 - 3015827
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||| |||||   | ||| |  |||| |||||||  ||||| || ||||||||||||||||||| |||||||||||    
T  3015913 tataagctgttttcaaaagctaatcatgagagcttattaaaataagatgaaaacatcttatggacatgtcataagttgttttcataa 3015827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 26599193 - 26599235
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagct 140  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||    
T  26599193 tatgaaaataagctgaaatcagcttatggatatgtcataagct 26599235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 30923929 - 30923883
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcata 149  Q
    |||||| |||||| |||||||| ||||||||||||||||||| ||||    
T  30923929 aaataagctgaaaacagcttatagacatgtcataagctgtttccata 30923883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 47513686 - 47513764
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtg 175  Q
    ||||||||||||  ||||| || |||||| || ||||||||  |||||||||||  ||||| ||||||||| |||||||    
T  47513686 ttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttttcataagtcctcccgaacagtctcacaagtg 47513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 39723417 - 39723384
Alignment:
Q  117 cagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||| ||||||||||||||||||||||||    
T  39723417 cagcttatgaacatgtcataagctgttttcataa 39723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 41724209 - 41724298
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatg-aaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||| |||||||||  |||| ||||||| |  ||||  ||||||| |||||| || ||||||||||||||||||| ||||| |||||    
T  41724209 gctataaactgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagttgtttccataa 41724298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 48049019 - 48048966
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| |||||| |||||| ||||||||||||||||||| || || ||||||||    
T  48049019 ttatggaaataagctgaaaacagcttatggacatgtcatgagttggtttcataa 48048966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 50004691 - 50004784
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataa-tccctccagaacagtcttacaagtgcgtatgtcaatagataaact 195  Q
    |||||| |||||| ||||||| | |||||||||||| ||||| |||||  |||||   ||||||||||||| ||| ||||||| || |||||||    
T  50004691 aaataagctgaaaacagcttaagaacatgtcataagttgtttccataaggccctctcaaacagtcttacaattgcttatgtcagtaaataaact 50004784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 53952081 - 53952134
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||| |||||| ||||| ||| |||||| || ||||||||||||||    
T  53952081 ttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataa 53952134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 11040651 - 11040599
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcata 149  Q
    |||||||||||| | |||| || |||||||||||||||||  |||||||||||    
T  11040651 ttatgaaaataagccgaaaacaacttatggacatgtcatactctgttttcata 11040599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 37273167 - 37273251
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatg 181  Q
    ||||| ||||||  ||||| || ||||||||||||||||||| ||||| ||||| | ||||  |||||||| || ||||| ||||    
T  37273167 ttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatg 37273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 51130786 - 51130822
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcata 136  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  51130786 tgaaaataagctgaaagcaacttatggacatgtcata 51130822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 6292526 - 6292636
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    |||||||||||| |||||| ||||||||| ||||||||||||||||||| | |||  ||||  |||| ||| | |||||| ||||||| ||||||| ||     
T  6292526 ttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttttaaaaat-tctcccaaacaatctcaaaagtgcttatgtcagtagataagctc 6292624  T
Q  197 aaataagtcaat 208  Q
    ||||||||||||    
T  6292625 aaataagtcaat 6292636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 11639453 - 11639400
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  11639453 ttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataa 11639400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 26184781 - 26184828
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26184781 ttatggaaataatctgaaaacagcttatggacatgtcataagctgttt 26184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 31517812 - 31517671
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaa 161  Q
    |||||||||||| |||| || ||||| | || |  |||||||||||| |||||| ||||||||| ||||||||| || |||||| ||||   ||||  ||    
T  31517812 gctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaa 31517713  T
Q  162 cagtcttacaagtgcgtatgtcaatagataaacttaaataag 203  Q
    |||||| |||||||| |||| || || |||| || |||||||    
T  31517712 cagtctcacaagtgcttatgccagtaaataagctcaaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 34536216 - 34536285
Alignment:
Q  122 tatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagata 191  Q
    ||||||||||||||||||||||||||||| || ||   |||||||| |||||||  ||||||||||||||    
T  34536216 tatggacatgtcataagctgttttcataagccatctcaaacagtctcacaagtgtttatgtcaatagata 34536285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 4622129 - 4622245
Alignment:
Q  100 tgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaa 199  Q
    ||||||||| || ||| |||||||||||||||||||||| ||||  ||| |   || |  |||||||| |||||| | ||||||| ||| ||| ||||||    
T  4622129 tgaaaataagctaaaaacagcttatggacatgtcataagatgttcccattagatcttccaaacagtctaacaagttcttatgtcattagttaagcttaaa 4622228  T
Q  200 taagtcaattgaaacag 216  Q
    |||||||||| ||||||    
T  4622229 taagtcaattcaaacag 4622245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 10744300 - 10744384
Alignment:
Q  63 ctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttca 147  Q
    |||||||||||||||| |||||||| | || |  |||| |||||||  ||||| ||||||||| ||||| |||||||||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttca 10744384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 27140478 - 27140622
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaaca 163  Q
    ||||||||||||| | ||||| || | || |  ||||| |||||| |||||| || ||||||||||||||||||||||||| | ||| | |||   || |    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaaga 27140577  T
Q  164 gtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    | ||||||| ||  ||||||||||||||| || | ||||||||||    
T  27140578 gacttacaattgtttatgtcaatagataagctcatataagtcaat 27140622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 44422697 - 44422785
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||| |||| | ||||| |||| || |  |||||||||||| ||| |  |||||||||||||||||||||||| |||||||||    
T  44422697 gctataagctatttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataa 44422785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 4868433 - 4868543
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| ||||||  ||||| || ||||| ||||||||||||| ||||| ||||| | |||   |||||||| |||||||| |||||||||||||||| |     
T  4868433 ttatgtaaataagttgaaaacaacttattgacatgtcataagttgttt-cataaactctctcaaacagtctcacaagtgcctatgtcaatagataaattc 4868531  T
Q  197 aaataagtcaat 208  Q
    |||||| |||||    
T  4868532 aaataaatcaat 4868543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 10199445 - 10199334
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    |||||||||||| |||||| || |||||| |||||||||||||| ||||||| |   ||||  || ||| | |||||||| ||||| | ||||||| ||     
T  10199445 ttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttatgttagtagataagctc 10199346  T
Q  197 aaataagtcaat 208  Q
    ||||||||||||    
T  10199345 aaataagtcaat 10199334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 12763383 - 12763454
Alignment:
Q  124 tggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaact 195  Q
    ||||||||||||||||||||||| |||   ||||| ||||||||||||| ||| ||||  ||||||||||||    
T  12763383 tggacatgtcataagctgttttcgtaagttctccaaaacagtcttacaaatgcttatgctaatagataaact 12763454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 28689489 - 28689442
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||    
T  28689489 ttatgaaaataagctgaaaacaacttatggacatgtcataagctgttt 28689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 10439719 - 10439837
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| |||||| |||||||||| ||||||||||||||||   ||||||||||| | ||||  || ||||| |||||  | |||| | ||| |||| ||     
T  10439719 ttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaatagtctcacaagatcttatggccataaataagctc 10439818  T
Q  197 aaataagtcaattgaaaca 215  Q
    ||||||||||||| |||||    
T  10439819 aaataagtcaattcaaaca 10439837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 32515464 - 32515374
Alignment:
Q  111 tgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaata 201  Q
    ||||| || ||||| ||||||||||| ||||||| ||||| | ||||  |||||||| |||||||| ||||| | |||||||||| |||||    
T  32515464 tgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaata 32515374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 35925723 - 35925776
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| ||||||  ||||| ||||||||| ||||||||||||||||||||||||    
T  35925723 ttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataa 35925776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 4202184 - 4202140
Alignment:
Q  101 gaaaataatctgaaagcagcttatggacatgtcataagctgtttt 145  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||    
T  4202184 gaaaataagctgaaaatagcttatggacatgtcataagctgtttt 4202140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 11695894 - 11695946
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcata 149  Q
    ||||||||||||  ||||| ||||||||||||||||||||| |||||| ||||    
T  11695894 ttatgaaaataagttgaaaacagcttatggacatgtcataaactgtttccata 11695946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 24460470 - 24460390
Alignment:
Q  71 tgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataat 151  Q
    |||||||| ||||| ||||||| |  |||  ||||||| ||| || ||||||||| |||||||||||||| ||||||||||    
T  24460470 tgttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataagctattttcataat 24460390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 25479579 - 25479667
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||| |||||||| ||||| |||| || |  |||||||||||| |||||| || || ||| ||||||||||| || |||||||||    
T  25479579 gctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataa 25479667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 29045984 - 29045896
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||| |||||||| |||||||||| || | || ||| || ||   | |||||| ||||||||||||||||||| |||||||||||    
T  29045984 gctataagttgttttcataagctgtcctggagagatgatggaagtacgttaaaagcaacttatggacatgtcataagttgttttcataa 29045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 38170723 - 38170615
Alignment:
Q  101 gaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaat 200  Q
    ||||| || |||||| || |||||| |||||||||||||||||||||||| | ||||  | |||||| |||||||   ||| || || ||||  ||||||    
T  38170723 gaaaacaagctgaaaacaacttatgaacatgtcataagctgttttcataagctctcccaagcagtctcacaagtgttcatgccagtatataaggttaaat 38170624  T
Q  201 aagtcaatt 209  Q
    |||||||||    
T  38170623 aagtcaatt 38170615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 39270461 - 39270409
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||  ||||| ||||||||||||||| || |||||||||||||||    
T  39270461 tatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataa 39270409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 1565570 - 1565527
Alignment:
Q  99 atgaaaataatctgaaagcagcttatggacatgtcataagctgt 142  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||    
T  1565570 atgaaaataagctgaaaacagcttatgcacatgtcataagctgt 1565527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 37593721 - 37593670
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcat 148  Q
    |||||||||||| |||||| ||||||||| |||||||||||| ||| |||||    
T  37593721 ttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcat 37593670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 12477323 - 12477273
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcat 148  Q
    |||| |||||| |||||| || |||||||||||||||||||||| ||||||    
T  12477323 tatggaaataagctgaaaacaacttatggacatgtcataagctgctttcat 12477273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 27807168 - 27807266
Alignment:
Q  117 cagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaattgaaaca 215  Q
    ||||||||| ||| ||||| ||||| |||||||| | |||   ||||||||||||| ||| ||||||| |||| ||  | ||||||||||||| |||||    
T  27807168 cagcttatgaacacgtcatcagctgctttcataagctctctcaaacagtcttacaaatgcttatgtcagtagaaaagttcaaataagtcaatttaaaca 27807266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 10854770 - 10854815
Alignment:
Q  101 gaaaataatctgaaagcagcttatggacatgtcataagctgttttc 146  Q
    |||||||| |||||| |||||| || ||||||||||||||||||||    
T  10854770 gaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 10854815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 15581300 - 15581393
Alignment:
Q  110 ctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataag 203  Q
    |||||| |||||||| ||||||||||||| ||||| ||| | | || |  |||| ||| |||||||| ||||||| ||||||| || |||||||    
T  15581300 ctgaaaacagcttatagacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataagctaaaataag 15581393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 17628645 - 17628685
Alignment:
Q  110 ctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||||||||||||||||||| ||||| |||||    
T  17628645 ctgaaaacagcttatggacatgtcataagttgtttccataa 17628685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 21002193 - 21002233
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataa 137  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  21002193 ttatgaaaataaattgaaaacagcttatggacatgtcataa 21002233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 38307669 - 38307773
Alignment:
Q  71 tgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttac 170  Q
    |||||||||||||| || | || | ||||||||||||| | ||||| |||||||| ||||||||| || |||||||||||  | ||| ||||||| ||||    
T  38307669 tgttttcacaagctatcttggagaaattatgaaaataagccgaaagtagcttatgcacatgtcattagttgttttcataagtcttcccgaacagtgttac 38307768  T
Q  171 aagtg 175  Q
    |||||    
T  38307769 aagtg 38307773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 11569527 - 11569416
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaaca 163  Q
    ||||||||||||||| ||||| || | || | ||| ||||||||| |||||| || |||||| |||||||||||||||||| ||||| | |||   ||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaaca 11569428  T
Q  164 gtcttacaagtg 175  Q
    |||| |||||||    
T  11569427 gtctcacaagtg 11569416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 30191178 - 30191072
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| |||||| |||||| ||  || || |||||||||||| ||||| ||||| | ||||  |||||||| |||||||| |||| |||||||||||||     
T  30191178 ttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaactc 30191079  T
Q  197 aaataag 203  Q
    |||||||    
T  30191078 aaataag 30191072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 31705083 - 31705161
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagct 140  Q
    ||||||||||||||||| ||||||||||||| |  ||||| |||||| |||||| ||||||||| |||| || ||||||    
T  31705083 gctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgcacatctcttaagct 31705161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 11183543 - 11183631
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||||||||||||||  ||| || |  ||||| |||||| |||||| |||||||| ||||| ||||||| |||||| ||||    
T  11183543 gctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttttataa 11183631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 12851183 - 12851262
Alignment:
Q  71 tgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||| ||||| ||||||| |  |||||||||||| | |||| || |||||| |||||| |||||||||||||||||    
T  12851183 tgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataa 12851262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 30389097 - 30389184
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcata 149  Q
    |||||| |||||||||| ||||| |||| || |  |||||||||||| |||||| || |||||| ||||||||| |||| ||||||||    
T  30389097 gctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagctattttcata 30389184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 37353321 - 37353243
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagct 140  Q
    ||||||||||||||||  ||||| || |||| |  ||||||||||||||||||| ||| ||||| | ||||||||||||    
T  37353321 gctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataagct 37353243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 14949905 - 14949974
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaa 172  Q
    |||||| |||||| |||||||||||||||||||||| | ||||||||| | ||||  |||||||| ||||    
T  14949905 aaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcacaa 14949974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 26410279 - 26410424
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataat-ctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaac 162  Q
    |||||| |||||||| || ||||||| || |  ||||| ||||||  || ||| |||||| |||||||||||| |||||||| ||||| | ||||  | |    
T  26410279 tataagatgttttcaaaaactgtcctggagagcttatggaaataaagctaaaaacagcttctggacatgtcatgagctgtttccataagctctcccaagc 26410378  T
Q  163 agtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||||| | |||||| ||||||| | ||||||||||| |||| ||||    
T  26410379 agtctcagaagtgcttatgtcagttgataaacttaactaagccaat 26410424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 26473820 - 26473736
Alignment:
Q  66 taagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||| |||||||| ||||| |||| || |  ||||||||||||  | |||  ||||||| |||||||||||||||||||||||||    
T  26473820 taagttgttttcataagctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttttcataa 26473736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 29168681 - 29168649
Alignment:
Q  118 agcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||||||||||||||||||||||||    
T  29168681 agcttatggacatgtcataagctgttttcataa 29168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 3254264 - 3254307
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttc 146  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||    
T  3254264 aaataagctgaaaacagcttatgaacatgtcataagctgttttc 3254307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 6950355 - 6950466
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    ||||| |||||| |||||| || ||||| ||||||||||| | ||||| ||||| | ||||  |||| ||| |||| ||  |||| || ||||||||||     
T  6950355 ttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaactc 6950454  T
Q  197 aaataagtcaat 208  Q
    ||||||||||||    
T  6950455 aaataagtcaat 6950466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 12972891 - 12972966
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaa 172  Q
    |||||||||||| |  ||| |||||||| || |||||||||||||||||||||||  ||||  |||||||| ||||    
T  12972891 ttatgaaaataagccaaaaccagcttatagatatgtcataagctgttttcataatatctcccaaacagtctcacaa 12972966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 26499785 - 26499860
Alignment:
Q  133 cataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||||||||||||||||| | || || || ||||| |||||||| ||||||| |||||||| | |||||| |||||    
T  26499785 cataagctgttttcataacctctacaaaatagtctcacaagtgcttatgtcagtagataaattcaaataattcaat 26499860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 42215343 - 42215292
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcat 148  Q
    ||||| |||||| |||||| ||||||||| ||| ||||||||||||||||||    
T  42215343 ttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcat 42215292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 11415154 - 11415240
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||| |||||||||| ||||| |||| || |  || ||||||||| |||| |  ||||||||||||||| ||||||||||| |||||    
T  11415154 tatacgctgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataa 11415240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 20672783 - 20672825
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagc 139  Q
    |||||||||||| |||||| ||||||||| |||||||||||||    
T  20672783 ttatgaaaataagctgaaaacagcttatgaacatgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 39551281 - 39551135
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaa 161  Q
    |||||||| |||||||| ||||| |||| || |  |||| |||||||  | ||| |||||| ||||||||||||||| ||||| |||||   ||||  ||    
T  39551281 gctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaa 39551182  T
Q  162 cagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||| | |||| ||| ||| ||  ||||||| || ||||||||||||    
T  39551181 cagtttcacaaatgcttatatccgtagataatctcaaataagtcaat 39551135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 2488015 - 2487934
Alignment:
Q  127 acatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||||| ||||| |||||||||||   ||||  |||||||| |||||||| ||||||| ||||| |||| ||||||| ||||    
T  2488015 acatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaat 2487934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 7008698 - 7008755
Alignment:
Q  164 gtcttacaagtgcgtatgtcaatagataaacttaaataagtcaattgaaacagtctct 221  Q
    |||| |||||||| |||| || |||||||||| ||||||||||||| |||||| ||||    
T  7008698 gtctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaacaggctct 7008755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 9835937 - 9835884
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| ||||||  ||||| ||||||||| |||||||||||||||||| |||||    
T  9835937 ttatggaaataagatgaaaacagcttatgaacatgtcataagctgtttacataa 9835884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 10383918 - 10383971
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| |||||| ||| || ||||||||| | ||||||||||||||||||||||    
T  10383918 ttatggaaataagctgtaaacagcttatgaaaatgtcataagctgttttcataa 10383971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 13459678 - 13459731
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||||||  |||||| ||| ||||| | ||||||||||||||||||||||    
T  13459678 ttatgaaaataggctgaaaacagtttatgaaaatgtcataagctgttttcataa 13459731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 30277315 - 30277234
Alignment:
Q  64 tataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgtttt 145  Q
    ||||||||||||||| ||||| |||| || |  ||||| |||||| |||||| || ||||||| |||||| |||||| ||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatggccatgtcctaagctatttt 30277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 37740440 - 37740355
Alignment:
Q  121 ttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtca 206  Q
    |||||||||||||||||| ||||| ||||| | ||||  |||  ||| |||| | |||| ||||||||||||| | ||||||||||    
T  37740440 ttatggacatgtcataagttgtttccataaactctccctaaccatctcacaactacgtacgtcaatagataaattcaaataagtca 37740355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 3634658 - 3634610
Alignment:
Q  160 aacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||||||||||||||||| |||||||  |||||| || ||||||||||||    
T  3634658 aacagtcttacaagtgcatatgtcagcagataagctcaaataagtcaat 3634610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 8062327 - 8062415
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||||||||||||| ||||| || | || | |||||| |||||| |||||| || |||||||||| ||  ||| |||||| |||||    
T  8062327 gctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatggacacgttgtaaactgtttccataa 8062415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 9700034 - 9700074
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataa 137  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  9700034 ttatgaaaataaggtgaaaacagcttatggacatgtcataa 9700074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 40071747 - 40071835
Alignment:
Q  62 gctataagctgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||||| ||||||||| ||||| |||| || |  |||||||||| |  ||||||| | ||||| |||||||||||| ||||| |||||    
T  40071747 gctataaactgttttcagaagctatcctagaaagcttatgaaaattagttgaaagctgattatgaacatgtcataagttgtttccataa 40071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 6428074 - 6428169
Alignment:
Q  120 cttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaattgaaaca 215  Q
    ||||||||||||||||||| ||||||||||||| |||   ||| |||| |||||||| |||  ||||| |||| || ||||||||||||| |||||    
T  6428074 cttatggacatgtcataagttgttttcataatctctctcaaactgtctcacaagtgcttataccaatatataagctcaaataagtcaattcaaaca 6428169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 2996607 - 2996701
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataa 192  Q
    |||||||||||  |||||  ||||||||||||||||||||| ||||||||||| | |||   |||||||| | |||||| |||||||||| ||||    
T  2996607 tatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataa 2996701  T

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Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 7368077 - 7367980
Alignment:
Q  111 tgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||||||||||||||  |||||||||||||||||||||| | | ||||  |||||||| ||||| |  |||| |  |||||||||| ||||||||||||    
T  7368077 tgaaagcagcttataaacatgtcataagctgttttcatgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataagtcaat 7367980  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 52754638 - 52754685
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  52754638 aaataagctgaaagcagcttatggacacgtcataaactgttttcataa 52754685  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 206
Target Start/End: Original strand, 32071907 - 32072005
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataa 202  Q
    |||||| || ||| |||||||||||| ||||||||| ||||| |||||   ||| |  || |||| |||||||| |||||||||||||||||| ||||||    
T  32071907 aaataagcttaaaacagcttatggacgtgtcataagttgtttccataa---ctcaa--actgtctcacaagtgcttatgtcaatagataaactcaaataa 32072001  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 21043271 - 21043195
Alignment:
Q  98 tatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagt 174  Q
    ||||||||||  |||||| ||||||||| || ||||||||||||||| ||||| | ||||  |||||||| ||||||    
T  21043271 tatgaaaatacactgaaaacagcttatgaacgtgtcataagctgtttccataacctctcccaaacagtctcacaagt 21043195  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 29467661 - 29467614
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttt 144  Q
    ||||| |||||| |||||| ||||||||||||||||||||||| ||||    
T  29467661 ttatggaaataagctgaaaacagcttatggacatgtcataagccgttt 29467614  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 140
Target Start/End: Complemental strand, 3646703 - 3646673
Alignment:
Q  110 ctgaaagcagcttatggacatgtcataagct 140  Q
    |||||||||||||||||||||||||||||||    
T  3646703 ctgaaagcagcttatggacatgtcataagct 3646673  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 33534206 - 33534096
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaactt 196  Q
    |||||||||||| |||||| || |||||||| |||||| ||  ||||||||||| | |||   || | ||| |||||| | ||||||| ||||||| ||     
T  33534206 ttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcataagctctctcaaatactctcacaagtacttatgtcactagataagctc 33534107  T
Q  197 aaataagtcaa 207  Q
    |||||||||||    
T  33534106 aaataagtcaa 33534096  T

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Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 1137745 - 1137798
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    ||||| |||||| |||||| || |||||| |||||||||||| |||||||||||    
T  1137745 ttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataa 1137798  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 6978999 - 6978958
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataag 138  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  6978999 ttatgaaaataagctgaaaacagcttatagacatgtcataag 6978958  T

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Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 8468981 - 8469030
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctgttttc 146  Q
    ||||||||||||||||||| || |||||||||||| | |||| |||||||    
T  8468981 ttatgaaaataatctgaaaacaacttatggacatgccgtaagatgttttc 8469030  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 18628555 - 18628479
Alignment:
Q  132 tcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    ||||||| ||||||||||| | ||||  |||||||| |||||||  ||||||| ||||||| || ||||| ||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaatacgtcaat 18628479  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 21593043 - 21592999
Alignment:
Q  97 ttatgaaaataatctgaaagcagcttatggacatgtcataagctg 141  Q
    ||||| |||||| |||||||||||||||  |||||||||||||||    
T  21593043 ttatggaaataagctgaaagcagcttataaacatgtcataagctg 21592999  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 27970104 - 27970144
Alignment:
Q  110 ctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| |||||||| ||||||||||||| |||||||||||    
T  27970104 ctgaaaacagcttatagacatgtcataagttgttttcataa 27970144  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 28615391 - 28615478
Alignment:
Q  120 cttatggacatgtcataagctgttttcataatccctccagaacagtcttacaagtgcgtatgtcaatagataaacttaaataagtcaat 208  Q
    |||||| | ||||||| ||||||||||||||   ||||| |||| ||| |||||||  ||||  | |||||||||||||||||||||||    
T  28615391 cttatgaaaatgtcattagctgttttcataagttctcca-aacaatctcacaagtgtttatgctagtagataaacttaaataagtcaat 28615478  T

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Target: scaffold0072 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 4998 - 5045
Alignment:
Q  103 aaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||||    
T  4998 aaataagctaaaatcagcttatggacatgtcataagctgttttcataa 5045  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 306333 - 306412
Alignment:
Q  71 tgttttcacaagctgtccttgatatattatgaaaataatctgaaagcagcttatggacatgtcataagctgttttcataa 150  Q
    |||||||| ||||| |||| || |  ||||| || ||| |||||| |||||||||| ||||||||||||||||| |||||    
T  306333 tgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccataa 306412  T

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