View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20024_low_23 (Length: 203)
Name: NF20024_low_23
Description: NF20024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20024_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 32959729 - 32959904
Alignment:
| Q |
24 |
gctattattattggtctcacaaggattaattgatttcttaagatttttcaactcattttatttgtttccatgagcagaccatagctgtaattcaagctgg |
123 |
Q |
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| T |
32959729 |
gctattattattggtctcacaaggattaattgatttcttaagatttttcaactcattttatttgtttccatgagcagaccatagctgtaattcaagctgg |
32959828 |
T |
|
| Q |
124 |
acatggtcttcttcaacttggttcatgcaagattgtaagtacatttctatcatattttttctccttcatctcactc |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
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| T |
32959829 |
acatggtcttcttcaacttggttcatgcaagattgtaagtacatttctatcatattttttctccttcttttcactc |
32959904 |
T |
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