View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20025_high_25 (Length: 238)
Name: NF20025_high_25
Description: NF20025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20025_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 12295660 - 12295810
Alignment:
| Q |
71 |
atagttaccatgctgatgttaatttaggatttggttttgaccgtagcatctggnnnnnnnacaatcttccacgcacttatcaaatgttcctattattttg |
170 |
Q |
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| T |
12295660 |
atagttaccatgctgatgttaatttagaatttggttttgatcggagcatctggtttttttacaatcttccacgcacttatcaaatgttcctattattttg |
12295759 |
T |
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| Q |
171 |
tgtccgatacataatgcgtcacactttaattcacaaagtgatggtatctta |
221 |
Q |
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| T |
12295760 |
tgtccgatacataatgcgtcacactttaattcacaaagtgatggtatctta |
12295810 |
T |
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