View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20025_high_31 (Length: 220)
Name: NF20025_high_31
Description: NF20025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20025_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 38290655 - 38290470
Alignment:
| Q |
18 |
tcaagctgatggaatgtaatattcaagaaagaaattgaagagaagttggatataggtcaccatgactgtcacgtggcatatcacatggtttagggtccat |
117 |
Q |
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| T |
38290655 |
tcaagctgatggaatgtaatattcaagaaagaaattgaagagaagttggatataggtcaccatgactgtcacgtggcatatcacatggtttagggtccat |
38290556 |
T |
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| Q |
118 |
cagtgacaagcaagaagataatatatatgcatgtatatggtttgaactttgaacaacacctatttttgtagggcaaattttttcat |
203 |
Q |
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| T |
38290555 |
cagtgacaagcaagaagataatatatatgcatgtatatggtttgaactttgaacaacacctatttttttagggcaaattttttcat |
38290470 |
T |
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