View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20025_low_15 (Length: 309)
Name: NF20025_low_15
Description: NF20025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20025_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 15 - 294
Target Start/End: Original strand, 35323323 - 35323602
Alignment:
| Q |
15 |
gagtgattgagaaatggtttgctttgctaggttagtaagagaacgagttgagatatattggcatgcaaatgcgaaaattgttaactaaaagctaggctta |
114 |
Q |
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| T |
35323323 |
gagtgattgagaaatggtttgctttgctaggttagtaagagaacgagttgagatatattggcatgcaaatgcgaaaattgttaactaaaagctaggctta |
35323422 |
T |
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| Q |
115 |
atcattatcatcagtaaggggaatgactaactttggacaggatataaaggcaacgatagattaagcattatcctcaacataacgaatatatcccacaacc |
214 |
Q |
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| T |
35323423 |
atcattatcatcagtaagaggaatgactaactttggacaggatataaaggcaacgatagattaagcattatcctcaacataacgaatatatcccacaacc |
35323522 |
T |
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| Q |
215 |
cgaccactgacgaaccaaagtttgaatccgactcgataaaagtgttcagatttatttttcgattgtcatatggtcaatgt |
294 |
Q |
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| T |
35323523 |
cgaccactgacgaaccaaagtttgaatccgactcgataaaagtgttcagatttatttttcgattgtcatatggtcaatgt |
35323602 |
T |
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