View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20026_low_14 (Length: 322)
Name: NF20026_low_14
Description: NF20026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20026_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 36464857 - 36465119
Alignment:
| Q |
1 |
tttcattgggtatttgattgtgtgaatgaatgattaatttttccaacaaaagcttatatggtgggaagggaaggtaacttctaattctcttgtgttagtg |
100 |
Q |
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| T |
36464857 |
tttcattgggtatttgattgtgtgaatgaatgattaatttttccaacaaaagcttatatggtgggaagggaaggtaacttctaattctcttgtgttagtg |
36464956 |
T |
|
| Q |
101 |
aacttccttatctatgttgaaatcgctataacccttatctatgtagacattgtaagtaatgatttacgtcggatttgcatcataaaaatctgctttaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36464957 |
aacttccttatctatgttgaaatcgctataacccttatctatgtagacattgtaagtaatgatttacgtcggatttgcatcataaaaatctgctttaaaa |
36465056 |
T |
|
| Q |
201 |
tcaatatgtattagtattatagtcttgtacaaggcaatcatgtagctagtaatatactataaa |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36465057 |
tcaatatgtattagtattatagtcttgtacaaggcaatcatgtagctagtaatatactataaa |
36465119 |
T |
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