View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20026_low_17 (Length: 309)

Name: NF20026_low_17
Description: NF20026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20026_low_17
NF20026_low_17
[»] chr1 (16 HSPs)
chr1 (20-307)||(2784562-2784850)
chr1 (20-78)||(28674806-28674864)
chr1 (20-69)||(34257914-34257963)
chr1 (20-71)||(1864882-1864933)
chr1 (26-109)||(2896085-2896168)
chr1 (23-81)||(23636041-23636099)
chr1 (22-72)||(29163382-29163432)
chr1 (26-72)||(44482242-44482288)
chr1 (16-81)||(40181873-40181938)
chr1 (16-72)||(13436460-13436516)
chr1 (27-71)||(13997896-13997940)
chr1 (20-72)||(25272488-25272540)
chr1 (32-72)||(30749858-30749898)
chr1 (32-72)||(30771309-30771349)
chr1 (32-72)||(34371731-34371771)
chr1 (28-72)||(48148038-48148082)
[»] chr8 (8 HSPs)
chr8 (26-120)||(14134711-14134805)
chr8 (16-72)||(13844597-13844653)
chr8 (21-72)||(4786339-4786390)
chr8 (16-71)||(11803261-11803316)
chr8 (19-60)||(31580140-31580181)
chr8 (16-72)||(11927087-11927143)
chr8 (16-72)||(11944667-11944723)
chr8 (32-72)||(26902176-26902216)
[»] chr3 (7 HSPs)
chr3 (20-78)||(7614410-7614468)
chr3 (26-72)||(28678315-28678361)
chr3 (33-78)||(8842348-8842393)
chr3 (16-73)||(13807171-13807228)
chr3 (16-81)||(25093504-25093569)
chr3 (20-72)||(4201402-4201454)
chr3 (16-72)||(45451555-45451611)
[»] chr7 (12 HSPs)
chr7 (26-109)||(27093377-27093460)
chr7 (26-109)||(27184841-27184924)
chr7 (26-72)||(3721105-3721151)
chr7 (26-71)||(23849460-23849505)
chr7 (32-72)||(39138462-39138502)
chr7 (26-72)||(19206062-19206108)
chr7 (26-72)||(24146828-24146874)
chr7 (27-72)||(22602711-22602756)
chr7 (32-81)||(22868060-22868109)
chr7 (20-69)||(27732243-27732292)
chr7 (16-72)||(16341498-16341554)
chr7 (32-72)||(18213034-18213074)
[»] chr4 (9 HSPs)
chr4 (26-109)||(9996852-9996935)
chr4 (21-73)||(5775358-5775410)
chr4 (26-72)||(8423719-8423765)
chr4 (26-72)||(13134462-13134508)
chr4 (32-77)||(19097890-19097935)
chr4 (22-70)||(16189717-16189765)
chr4 (21-73)||(21539867-21539919)
chr4 (26-78)||(30103352-30103403)
chr4 (32-72)||(44132645-44132685)
[»] chr5 (5 HSPs)
chr5 (26-72)||(22423813-22423859)
chr5 (21-79)||(28862312-28862370)
chr5 (34-120)||(42893380-42893466)
chr5 (26-71)||(17123060-17123105)
chr5 (26-78)||(17925167-17925219)
[»] scaffold0022 (1 HSPs)
scaffold0022 (21-94)||(90850-90923)
[»] chr6 (12 HSPs)
chr6 (26-71)||(9658891-9658936)
chr6 (26-94)||(2040576-2040644)
chr6 (22-94)||(7377987-7378059)
chr6 (16-72)||(9025495-9025551)
chr6 (16-72)||(26562691-26562747)
chr6 (16-71)||(7086797-7086852)
chr6 (26-81)||(13360364-13360419)
chr6 (26-68)||(4040478-4040520)
chr6 (26-72)||(7265594-7265640)
chr6 (22-72)||(8931603-8931653)
chr6 (26-72)||(14796191-14796237)
chr6 (20-72)||(5732511-5732563)
[»] chr2 (4 HSPs)
chr2 (15-64)||(41942106-41942155)
chr2 (26-102)||(37411215-37411291)
chr2 (32-102)||(20242698-20242768)
chr2 (32-72)||(34784983-34785023)
[»] scaffold0123 (1 HSPs)
scaffold0123 (22-69)||(44529-44576)
[»] scaffold0039 (1 HSPs)
scaffold0039 (26-73)||(84973-85020)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-72)||(135313-135369)


Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 20 - 307
Target Start/End: Original strand, 2784562 - 2784850
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacacacttaatttgaggagtg 119  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  2784562 gttaaaaatttaagaaaatcacataattgagtataattatatgtgtcggtgtcagacacaacgtgtatccgacactaggacacacttaatttgagaagtg 2784661  T
Q  120 tatacgtgcttcatagtatcagagttaattaactatcaacaaaaagaataaacagaaaaccattcataaagctacattgacgagtgatatatgtatctca 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2784662 tatacgtgcttcatagtatcagagttaattaactatcaacaaaaagcataaacagaaaaccattcataaagctacattgacgagtgatatatgtatctca 2784761  T
Q  220 caattctcattattacacacattctgttttattatgcttttaagttttaacaa-accccaaaattccttacattgccactgctaacaca 307  Q
    || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2784762 cacttctcattattacacacattctgttttattatgtttttaagttttaacaagaccccaaaattccttacattgccactgctaacaca 2784850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 28674806 - 28674864
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacac 78  Q
    ||||| ||||| ||||||| |||||||| ||||||||||||||||| ||||||| ||||    
T  28674806 gttaataatttgagaaaattacataattcagtataattatatatgttggtgtcagacac 28674864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 34257963 - 34257914
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggt 69  Q
    ||||| ||||||| |||||||||||||| ||| |||||||||||||||||    
T  34257963 gttaataatttaataaaatcacataatttagtgtaattatatatgtcggt 34257914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 1864933 - 1864882
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgt 71  Q
    ||||| ||||| |||||||||||||||| ||| ||||||||| |||||||||    
T  1864933 gttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 2896168 - 2896085
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacacacttaat 109  Q
    ||||| |||||||||||||||| ||| ||  ||||||||||||||||| |||| || ||| ||||| ||  |||||||| ||||    
T  2896168 aatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaat 2896085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 23636099 - 23636041
Alignment:
Q  23 aaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaac 81  Q
    |||||||| ||||||| |||||||| ||| ||||| ||| ||||||||||| |||||||    
T  23636099 aaaaatttgagaaaattacataattcagtgtaattgtatgtgtcggtgtcagacacaac 23636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 29163432 - 29163382
Alignment:
Q  22 taaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||| ||||||||||||||| | | ||||||||| ||||||||||    
T  29163432 taaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtc 29163382  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 44482242 - 44482288
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  44482242 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 44482288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 40181873 - 40181938
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaac 81  Q
    ||||| ||| ||||| |||||||||||||||| ||| ||||||||| | ||||||||  |||||||    
T  40181873 cactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaac 40181938  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 13436460 - 13436516
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||| |||||||| ||||||||||||| ||| ||||||||| ||| ||||||    
T  13436460 cactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtc 13436516  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 13997896 - 13997940
Alignment:
Q  27 atttaagaaaatcacataattgagtataattatatatgtcggtgt 71  Q
    |||||| |||||||||||||| ||| ||||||||| |||||||||    
T  13997896 atttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 25272488 - 25272540
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||||| |||||||||||||||| ||| ||||||||  ||||||||||    
T  25272488 gttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgtc 25272540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 30749858 - 30749898
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 30749898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 30771309 - 30771349
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 30771349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 34371731 - 34371771
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 34371771  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 48148082 - 48148038
Alignment:
Q  28 tttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||||||| |||||| ||| ||||||||||||||||||||    
T  48148082 tttaaaaaaatcatataattcagtgtaattatatatgtcggtgtc 48148038  T

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Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 14134711 - 14134805
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacacacttaatttgaggagtgt 120  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||  || |||| ||| ||||||| | ||||| |||||||||    
T  14134711 aatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgt 14134805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 13844653 - 13844597
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||| ||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  13844653 cactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtc 13844597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 4786390 - 4786339
Alignment:
Q  21 ttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||| |||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  4786390 ttaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtc 4786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 11803261 - 11803316
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgt 71  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  11803261 cactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgt 11803316  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 31580181 - 31580140
Alignment:
Q  19 tgttaaaaatttaagaaaatcacataattgagtataattata 60  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  31580181 tgttaataatttaagaaaatcacataattgagtgtaattata 31580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 11927143 - 11927087
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||||||| ||||| | |||||||||||||| ||| ||||||||| ||||||||||    
T  11927143 cactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtc 11927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 11944667 - 11944723
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||||||| ||||| | |||||||||||| | ||| ||||||||| ||||||||||    
T  11944667 cactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtc 11944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 26902216 - 26902176
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 26902176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 7614468 - 7614410
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacac 78  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  7614468 gttaataatttaagaaaatcacataattcagtataattatatatgtcggtgtcgaacac 7614410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 28678315 - 28678361
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||||| |||||||||||||| ||||||||| ||| ||||||||||    
T  28678315 aatttaataaaatcacataatttagtataattgtatgtgtcggtgtc 28678361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 8842348 - 8842393
Alignment:
Q  33 gaaaatcacataattgagtataattatatatgtcggtgtcaaacac 78  Q
    |||||||||||||||  || ||||||||||||||||||||| ||||    
T  8842348 gaaaatcacataatttggtgtaattatatatgtcggtgtcagacac 8842393  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 13807171 - 13807228
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtca 73  Q
    ||||| ||| ||||| |||||||||||||||| | |||||| |||| |||||||||||    
T  13807171 cactgataacaatttgagaaaatcacataattcaatataataatatgtgtcggtgtca 13807228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 25093504 - 25093569
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaac 81  Q
    |||||||||  |||| ||||||||||| |||| ||| ||||||||| ||||||||||  |||||||    
T  25093504 cactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaac 25093569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 4201402 - 4201454
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  4201402 gttaataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtc 4201454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 45451555 - 45451611
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||| ||||| ||||||||||||| || |||||||| |||| ||||||||||    
T  45451555 cactgctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtc 45451611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 27093460 - 27093377
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacacacttaat 109  Q
    |||||||||||||||||||||| ||| |||||||||  |||||||| | |||| || ||| |||||||||||||||||| ||||    
T  27093460 aatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaat 27093377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 27184841 - 27184924
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacacacttaat 109  Q
    |||||||||||||||||||||| ||| |||||||||  |||||||| | |||| || ||| |||||||||||||||||| ||||    
T  27184841 aatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaat 27184924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 3721105 - 3721151
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  3721105 aatttgagaaaatcacataatttagtataattatatgtgtcggtgtc 3721151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 23849505 - 23849460
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgt 71  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||||    
T  23849505 aatttaagaaaaacacataattcagtataattatatgtgtcggtgt 23849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 39138462 - 39138502
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtc 39138502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 19206062 - 19206108
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| |||||||||||||||| | ||||||||||| ||||||||||    
T  19206062 aatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 24146828 - 24146874
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| |||||||||||||||| | ||||||||||| ||||||||||    
T  24146828 aattttagaaaatcacataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 22602756 - 22602711
Alignment:
Q  27 atttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 22868060 - 22868109
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtcaaacacaac 81  Q
    |||||||||||||||| ||| ||||||||| |||| || |||||||||||    
T  22868060 agaaaatcacataattcagtgtaattatatgtgtcagtatcaaacacaac 22868109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 27732292 - 27732243
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggt 69  Q
    ||||| ||||||||||||| |||||||| ||| ||||||||| |||||||    
T  27732292 gttaataatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 16341498 - 16341554
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||| ||||| |||||||||||||||| ||| ||||||||| || |||||||    
T  16341498 cactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtc 16341554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 18213074 - 18213034
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtc 18213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 9996852 - 9996935
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacacacttaat 109  Q
    ||||| |||||||||||||||| ||||||||||||| | ||||||||| ||| |||  || ||||||||| | |||||| ||||    
T  9996852 aatttgagaaaatcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacactggaacacacctaat 9996935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 5775410 - 5775358
Alignment:
Q  21 ttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtca 73  Q
    |||| ||||| |||||||||||||||| ||| ||||||||| |||||||||||    
T  5775410 ttaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtca 5775358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 8423765 - 8423719
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| |||||||||||||||| ||| |||||||| |||||||||||    
T  8423765 aatttgagaaaatcacataattcagtgtaattataaatgtcggtgtc 8423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 13134462 - 13134508
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| ||||    
T  13134462 aatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtc 13134508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 19097935 - 19097890
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtcaaaca 77  Q
    |||||||||| ||||| ||||||||||||| |||||||||| ||||    
T  19097935 agaaaatcacgtaattcagtataattatatttgtcggtgtcgaaca 19097890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 16189717 - 16189765
Alignment:
Q  22 taaaaatttaagaaaatcacataattgagtataattatatatgtcggtg 70  Q
    ||||||||| |||||||||||||||| ||| ||||||| | ||||||||    
T  16189717 taaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 21539919 - 21539867
Alignment:
Q  21 ttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtca 73  Q
    |||| ||||||||||||||| |||||| ||| ||||||||||| || ||||||    
T  21539919 ttaataatttaagaaaatcatataatttagtgtaattatatatatccgtgtca 21539867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 30103403 - 30103352
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacac 78  Q
    ||||| |||||||||||||||| ||| |||| |||| ||||||||||||||||    
T  30103403 aatttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgtcaaacac 30103352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 44132685 - 44132645
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||| ||||| ||||||||||||| ||||||||||    
T  44132685 agaaaatcacgtaattcagtataattatatgtgtcggtgtc 44132645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 22423859 - 22423813
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||    
T  22423859 aatttgagaaaatcacataattcaatataattatatatgtcggtgtc 22423813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 28862312 - 28862370
Alignment:
Q  21 ttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacaca 79  Q
    |||| |||| |||||||||| |||||| |||||||||| || ||| |||||||||||||    
T  28862312 ttaataattgaagaaaatcatataatttagtataattacatgtgttggtgtcaaacaca 28862370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 42893380 - 42893466
Alignment:
Q  34 aaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacacacttaatttgaggagtgt 120  Q
    |||||||||||||  ||| |||||| |  ||||||||||| |||||||  || |||||||| ||||||| | |||| ||||||||||    
T  42893380 aaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgt 42893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 17123060 - 17123105
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgt 71  Q
    ||||| |||||||||||||||  |||| ||||||||||||||||||    
T  17123060 aatttgagaaaatcacataatcaagtacaattatatatgtcggtgt 17123105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 17925219 - 17925167
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacac 78  Q
    |||||||||||||||||||||| | | |||| |||| |||||||||| |||||    
T  17925219 aatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcgaacac 17925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 90850 - 90923
Alignment:
Q  21 ttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacac 94  Q
    |||| ||||| ||||||||| |||||| ||| ||||||||||||||| ||||| |||||||  || ||||||||    
T  90850 ttaataatttgagaaaatcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacac 90923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 9658891 - 9658936
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgt 71  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||    
T  9658891 aatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 2040644 - 2040576
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacac 94  Q
    ||||| |||||||||| ||||| |||| |||||||||| || |||||  ||||||| ||||||||||||    
T  2040644 aatttgagaaaatcacgtaattcagtaaaattatatatatcagtgtcggacacaacatgtatccgacac 2040576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 7377987 - 7378059
Alignment:
Q  22 taaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacac 94  Q
    ||||||||| |||||||||||||||| | | ||||||||| ||||||||||  |||| || || |||||||||    
T  7377987 taaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacac 7378059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 9025551 - 9025495
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||| ||||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  9025551 cactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 26562691 - 26562747
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||||||||| |||||||||||||||| ||| ||||||||| ||||| ||||    
T  26562691 cactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 26562747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 7086797 - 7086852
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgt 71  Q
    ||||| ||| ||||| |||||||||||||||| ||| ||||||||| |||||||||    
T  7086797 cactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 13360419 - 13360364
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaac 81  Q
    ||||| |||||||||||||||| ||| ||||||||| | ||||||||| |||||||    
T  13360419 aatttgagaaaatcacataattcagtgtaattatatgtttcggtgtcagacacaac 13360364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 4040478 - 4040520
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcgg 68  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  4040478 aatttaagaaaatcgcattattcagtataattatatatgtcgg 4040520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 7265640 - 7265594
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  7265640 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 7265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 8931653 - 8931603
Alignment:
Q  22 taaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||||||| ||||||| |||||||| ||||||||||||| ||||| ||||    
T  8931653 taaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtc 8931603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 14796237 - 14796191
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||||||||| ||   |||||||||||||||||||    
T  14796237 aatttaagaaaatcacataattcagcgcaattatatatgtcggtgtc 14796191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 5732563 - 5732511
Alignment:
Q  20 gttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||||| ||||||||||||| || ||| ||||||||| ||||||||||    
T  5732563 gttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtc 5732511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 41942106 - 41942155
Alignment:
Q  15 tcactgttaaaaatttaagaaaatcacataattgagtataattatatatg 64  Q
    |||| ||||||||||| ||||||| |||||||| ||||||||||||||||    
T  41942106 tcaccgttaaaaatttgagaaaattacataattcagtataattatatatg 41942155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 37411291 - 37411215
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacac 102  Q
    ||||| |||||||||||||||| ||| | ||||||| ||||| |||| ||||| ||| || ||||||||| ||||||    
T  37411291 aatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacac 37411215  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 20242768 - 20242698
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtcaaacacaacgtgtatccgacactaggacac 102  Q
    |||||||||||||||| ||| ||||||||| ||||||||||  |||||||  || || ||||| |||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacac 20242698  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 34785023 - 34784983
Alignment:
Q  32 agaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtc 34784983  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 44576 - 44529
Alignment:
Q  22 taaaaatttaagaaaatcacataattgagtataattatatatgtcggt 69  Q
    ||||||||| |||||||||||||||| ||| ||||||||| |||||||    
T  44576 taaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 85020 - 84973
Alignment:
Q  26 aatttaagaaaatcacataattgagtataattatatatgtcggtgtca 73  Q
    ||||||||||||||| ||||||  || |||||||||||||||||||||    
T  85020 aatttaagaaaatcatataattatgtgtaattatatatgtcggtgtca 84973  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 135369 - 135313
Alignment:
Q  16 cactgttaaaaatttaagaaaatcacataattgagtataattatatatgtcggtgtc 72  Q
    ||||| ||| ||||| ||||||||||||||||  || ||||||||| ||||||||||    
T  135369 cactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

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