View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20027_high_25 (Length: 268)
Name: NF20027_high_25
Description: NF20027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20027_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 251
Target Start/End: Original strand, 40285638 - 40285877
Alignment:
| Q |
12 |
attcaaagttattattgttccttgcaagttttttaaaaaagtcaaaatgaatttcaaacttactgcacaaatgcggaaacgagaagatctcaacgaagga |
111 |
Q |
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| T |
40285638 |
attcaaagttattattgttccttgcaagttttttaaaaaagtcaaaatgaatttcaaacttactgcacaaatgcggaaacgagaagatctcaacgaagga |
40285737 |
T |
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| Q |
112 |
aagcttctccctgtacatcccacagaaattgcaccaaaacttgaagttctgaaagaaacctgcatgtatgttttaaccactcaaattaaaattttcactt |
211 |
Q |
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| T |
40285738 |
aagcttctccttgtacatcccacagaaattgcaccaaaacttgaagttctgaaagaaacctgcatgtatgttttaaccactcaaattaaaattttcactt |
40285837 |
T |
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| Q |
212 |
cttcctcacctcatnnnnnnngtattaaaaccactgtgtt |
251 |
Q |
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| T |
40285838 |
cttcctcacctcataaaaaaagtattaaaaccactgtgtt |
40285877 |
T |
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