View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20029_high_35 (Length: 263)

Name: NF20029_high_35
Description: NF20029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20029_high_35
NF20029_high_35
[»] chr6 (54 HSPs)
chr6 (18-252)||(26314574-26314808)
chr6 (142-229)||(7265556-7265643)
chr6 (142-216)||(9658888-9658962)
chr6 (142-211)||(19040361-19040430)
chr6 (142-229)||(28152108-28152194)
chr6 (142-228)||(28715304-28715390)
chr6 (142-211)||(31579208-31579275)
chr6 (142-240)||(33001241-33001339)
chr6 (142-191)||(7996379-7996428)
chr6 (142-191)||(8022373-8022422)
chr6 (142-191)||(9025495-9025544)
chr6 (144-197)||(13360367-13360420)
chr6 (145-201)||(7377991-7378047)
chr6 (143-199)||(13364698-13364754)
chr6 (142-218)||(34595143-34595219)
chr6 (142-197)||(21924930-21924985)
chr6 (142-192)||(11784216-11784266)
chr6 (142-179)||(7569181-7569218)
chr6 (142-191)||(9195755-9195804)
chr6 (142-191)||(9617443-9617492)
chr6 (142-191)||(9629392-9629441)
chr6 (142-198)||(5732504-5732560)
chr6 (142-190)||(7086804-7086852)
chr6 (142-198)||(13851745-13851801)
chr6 (153-201)||(23771598-23771646)
chr6 (142-229)||(33419182-33419270)
chr6 (113-180)||(677818-677884)
chr6 (142-197)||(7938125-7938180)
chr6 (142-197)||(7977825-7977880)
chr6 (142-180)||(1532249-1532287)
chr6 (142-184)||(5462695-5462737)
chr6 (142-192)||(19044473-19044523)
chr6 (142-188)||(25038075-25038121)
chr6 (145-191)||(26562701-26562747)
chr6 (161-199)||(27904029-27904067)
chr6 (142-192)||(34895034-34895084)
chr6 (142-215)||(6898258-6898331)
chr6 (142-191)||(7723251-7723300)
chr6 (141-202)||(7740649-7740710)
chr6 (142-179)||(8389485-8389522)
chr6 (142-191)||(9027187-9027236)
chr6 (145-186)||(11591876-11591917)
chr6 (142-215)||(12627554-12627627)
chr6 (142-175)||(19602198-19602231)
chr6 (142-187)||(30866149-30866194)
chr6 (161-214)||(32298585-32298638)
chr6 (142-191)||(34073348-34073397)
chr6 (142-190)||(15443704-15443752)
chr6 (142-202)||(16833317-16833377)
chr6 (142-186)||(21142127-21142171)
chr6 (142-198)||(24614419-24614475)
chr6 (142-186)||(24832597-24832641)
chr6 (163-207)||(30851630-30851674)
chr6 (142-182)||(33817958-33817998)
[»] chr1 (55 HSPs)
chr1 (142-234)||(28674809-28674901)
chr1 (107-218)||(5898240-5898350)
chr1 (142-229)||(40181880-40181967)
chr1 (142-239)||(2896074-2896171)
chr1 (142-229)||(40258896-40258983)
chr1 (142-199)||(16927178-16927235)
chr1 (142-218)||(18190082-18190158)
chr1 (145-197)||(23636044-23636096)
chr1 (142-202)||(39130757-39130817)
chr1 (142-213)||(36878470-36878541)
chr1 (107-177)||(37055871-37055940)
chr1 (142-191)||(38503329-38503378)
chr1 (144-229)||(43492457-43492542)
chr1 (113-198)||(52903230-52903314)
chr1 (161-229)||(1815285-1815353)
chr1 (142-190)||(1864882-1864930)
chr1 (143-191)||(44482240-44482288)
chr1 (142-213)||(21530698-21530769)
chr1 (142-200)||(14332634-14332692)
chr1 (153-191)||(48148038-48148076)
chr1 (142-191)||(7918212-7918261)
chr1 (153-190)||(24462678-24462715)
chr1 (142-229)||(1486667-1486759)
chr1 (142-198)||(9709829-9709885)
chr1 (142-218)||(18337338-18337414)
chr1 (143-191)||(25361896-25361944)
chr1 (152-244)||(29163329-29163421)
chr1 (142-198)||(41877464-41877520)
chr1 (146-186)||(49872850-49872890)
chr1 (144-191)||(7353494-7353541)
chr1 (142-213)||(22907318-22907389)
chr1 (113-192)||(27471566-27471644)
chr1 (148-191)||(34371728-34371771)
chr1 (142-229)||(37598841-37598927)
chr1 (113-191)||(6612172-6612249)
chr1 (116-214)||(13997867-13997964)
chr1 (151-197)||(30749858-30749904)
chr1 (151-197)||(30771309-30771355)
chr1 (128-197)||(2784552-2784620)
chr1 (142-191)||(6427359-6427408)
chr1 (142-179)||(8010300-8010337)
chr1 (142-191)||(9629901-9629950)
chr1 (142-191)||(9828053-9828102)
chr1 (113-190)||(17754292-17754368)
chr1 (143-180)||(19324572-19324609)
chr1 (142-191)||(20157351-20157400)
chr1 (143-180)||(25098567-25098604)
chr1 (142-179)||(34298445-34298482)
chr1 (142-191)||(34712384-34712433)
chr1 (142-191)||(41017405-41017454)
chr1 (142-190)||(10233262-10233310)
chr1 (142-190)||(10572591-10572639)
chr1 (142-198)||(13436467-13436523)
chr1 (142-197)||(25452145-25452198)
chr1 (161-229)||(51410053-51410121)
[»] scaffold0022 (1 HSPs)
scaffold0022 (113-214)||(90824-90924)
[»] chr4 (40 HSPs)
chr4 (142-229)||(8423681-8423768)
chr4 (147-213)||(8402721-8402787)
chr4 (142-183)||(37698721-37698762)
chr4 (142-216)||(35157961-35158035)
chr4 (142-208)||(54580007-54580073)
chr4 (161-218)||(49431054-49431111)
chr4 (142-218)||(29205453-29205529)
chr4 (142-213)||(9996849-9996920)
chr4 (142-229)||(21345496-21345583)
chr4 (142-192)||(5775358-5775408)
chr4 (163-213)||(20950406-20950456)
chr4 (182-244)||(30982815-30982877)
chr4 (107-180)||(903897-903969)
chr4 (118-198)||(15835632-15835712)
chr4 (142-215)||(21945512-21945585)
chr4 (142-179)||(24343516-24343553)
chr4 (142-194)||(21539865-21539917)
chr4 (141-201)||(30103348-30103407)
chr4 (142-202)||(40179626-40179686)
chr4 (142-178)||(56257942-56257978)
chr4 (142-229)||(12797301-12797387)
chr4 (142-229)||(28964211-28964298)
chr4 (142-197)||(33950145-33950200)
chr4 (142-229)||(7214489-7214572)
chr4 (142-180)||(22440612-22440650)
chr4 (142-180)||(36635333-36635371)
chr4 (153-186)||(1213227-1213260)
chr4 (142-191)||(4672086-4672135)
chr4 (142-179)||(6273953-6273990)
chr4 (143-192)||(18576037-18576086)
chr4 (142-191)||(21720508-21720557)
chr4 (142-179)||(30838219-30838256)
chr4 (142-187)||(40613459-40613504)
chr4 (142-191)||(40742600-40742649)
chr4 (142-186)||(999354-999398)
chr4 (145-189)||(16189721-16189765)
chr4 (142-178)||(32910560-32910596)
chr4 (142-214)||(38846990-38847062)
chr4 (142-190)||(43299973-43300021)
chr4 (142-186)||(43300625-43300669)
[»] chr8 (30 HSPs)
chr8 (142-208)||(14134708-14134774)
chr8 (142-196)||(12606825-12606879)
chr8 (141-218)||(40332199-40332276)
chr8 (142-190)||(7658472-7658520)
chr8 (142-218)||(20679369-20679445)
chr8 (142-207)||(3025560-3025625)
chr8 (142-207)||(33405369-33405434)
chr8 (142-186)||(13203650-13203694)
chr8 (142-201)||(4786329-4786388)
chr8 (142-197)||(12985401-12985456)
chr8 (142-197)||(13844591-13844646)
chr8 (142-229)||(31557006-31557092)
chr8 (142-197)||(34897094-34897149)
chr8 (145-191)||(14634142-14634188)
chr8 (142-191)||(11927087-11927136)
chr8 (142-199)||(31236570-31236627)
chr8 (142-218)||(926762-926838)
chr8 (142-190)||(4122251-4122299)
chr8 (142-189)||(4611543-4611590)
chr8 (119-190)||(11803246-11803316)
chr8 (142-180)||(12559118-12559156)
chr8 (113-191)||(24669414-24669491)
chr8 (142-192)||(33382019-33382069)
chr8 (143-217)||(38079009-38079083)
chr8 (142-199)||(4948661-4948718)
chr8 (142-191)||(11944674-11944723)
chr8 (170-218)||(126321-126369)
chr8 (167-207)||(3951521-3951561)
chr8 (162-202)||(8293854-8293894)
chr8 (151-191)||(26902176-26902216)
[»] chr7 (50 HSPs)
chr7 (142-229)||(21880161-21880248)
chr7 (161-245)||(33994240-33994324)
chr7 (142-201)||(5835256-5835315)
chr7 (113-208)||(20549772-20549866)
chr7 (113-208)||(22484006-22484100)
chr7 (151-218)||(39138462-39138529)
chr7 (142-191)||(5235995-5236044)
chr7 (142-229)||(598217-598304)
chr7 (143-202)||(3554496-3554555)
chr7 (143-202)||(9482944-9483003)
chr7 (140-191)||(22602711-22602762)
chr7 (116-190)||(5233613-5233686)
chr7 (142-188)||(27732243-27732289)
chr7 (161-202)||(640141-640182)
chr7 (142-191)||(7328692-7328741)
chr7 (142-191)||(7758331-7758380)
chr7 (142-191)||(27945050-27945099)
chr7 (142-198)||(3721102-3721158)
chr7 (143-191)||(5548686-5548734)
chr7 (142-190)||(23128663-23128711)
chr7 (142-218)||(23191905-23191980)
chr7 (142-218)||(32287437-32287513)
chr7 (142-201)||(1401034-1401093)
chr7 (146-189)||(3520345-3520388)
chr7 (142-197)||(4909160-4909215)
chr7 (142-229)||(8234155-8234242)
chr7 (144-191)||(17307904-17307951)
chr7 (142-201)||(26022540-26022599)
chr7 (142-201)||(27093404-27093463)
chr7 (142-201)||(27184838-27184897)
chr7 (142-197)||(28155579-28155634)
chr7 (142-177)||(30813821-30813856)
chr7 (142-220)||(7197269-7197347)
chr7 (161-215)||(15680837-15680891)
chr7 (153-186)||(10478729-10478762)
chr7 (142-191)||(16341505-16341554)
chr7 (142-191)||(18013075-18013124)
chr7 (151-200)||(18213025-18213074)
chr7 (142-191)||(19206059-19206108)
chr7 (142-191)||(19992010-19992059)
chr7 (142-179)||(25239716-25239753)
chr7 (142-191)||(32308129-32308178)
chr7 (142-178)||(2424623-2424659)
chr7 (142-186)||(8239056-8239100)
chr7 (142-178)||(11890933-11890969)
chr7 (142-186)||(12278844-12278888)
chr7 (142-190)||(15902831-15902879)
chr7 (142-190)||(17851440-17851488)
chr7 (142-202)||(22868051-22868111)
chr7 (142-178)||(29787383-29787419)
[»] chr5 (41 HSPs)
chr5 (142-213)||(12927663-12927734)
chr5 (142-229)||(30502351-30502438)
chr5 (142-229)||(30542694-30542781)
chr5 (142-208)||(32630719-32630785)
chr5 (142-218)||(23012382-23012458)
chr5 (142-202)||(28588664-28588724)
chr5 (143-218)||(18421815-18421890)
chr5 (142-228)||(27932244-27932330)
chr5 (142-191)||(36838552-36838601)
chr5 (142-229)||(21191019-21191106)
chr5 (141-199)||(26312777-26312835)
chr5 (142-228)||(42893369-42893455)
chr5 (142-191)||(3966512-3966561)
chr5 (142-191)||(6035492-6035540)
chr5 (142-191)||(6471890-6471939)
chr5 (142-191)||(22423813-22423862)
chr5 (142-179)||(25863213-25863250)
chr5 (145-198)||(34879362-34879415)
chr5 (142-202)||(16203785-16203845)
chr5 (160-212)||(42126300-42126352)
chr5 (142-197)||(2548396-2548451)
chr5 (143-182)||(10022642-10022681)
chr5 (143-229)||(14873527-14873618)
chr5 (142-189)||(17593725-17593772)
chr5 (142-229)||(21576708-21576795)
chr5 (105-180)||(33035813-33035887)
chr5 (142-188)||(30098335-30098381)
chr5 (143-229)||(43564891-43564977)
chr5 (144-177)||(6326312-6326345)
chr5 (142-179)||(7997179-7997216)
chr5 (144-197)||(15086482-15086535)
chr5 (142-191)||(39205889-39205938)
chr5 (146-191)||(41091258-41091303)
chr5 (142-191)||(41633744-41633793)
chr5 (142-198)||(6247631-6247687)
chr5 (142-203)||(8686635-8686698)
chr5 (142-190)||(15410450-15410498)
chr5 (142-190)||(19737484-19737532)
chr5 (144-180)||(24273042-24273078)
chr5 (144-180)||(24389136-24389172)
chr5 (151-207)||(42029770-42029826)
[»] chr3 (39 HSPs)
chr3 (142-191)||(8039836-8039885)
chr3 (161-229)||(40993298-40993366)
chr3 (142-198)||(8383266-8383322)
chr3 (143-202)||(8789540-8789599)
chr3 (142-197)||(20691328-20691383)
chr3 (142-215)||(45451562-45451635)
chr3 (142-198)||(7928459-7928515)
chr3 (142-218)||(18426958-18427034)
chr3 (141-229)||(20503473-20503561)
chr3 (113-213)||(25093483-25093582)
chr3 (142-229)||(10954961-10955048)
chr3 (142-208)||(11251987-11252051)
chr3 (125-191)||(7614416-7614481)
chr3 (152-202)||(8842348-8842398)
chr3 (162-216)||(24633377-24633431)
chr3 (146-192)||(29112280-29112326)
chr3 (142-196)||(40150567-40150621)
chr3 (142-191)||(21419456-21419505)
chr3 (142-244)||(29508453-29508561)
chr3 (142-190)||(17005621-17005669)
chr3 (159-239)||(23657765-23657845)
chr3 (142-198)||(49505148-49505204)
chr3 (142-196)||(4201405-4201459)
chr3 (145-211)||(6780400-6780466)
chr3 (142-188)||(10690266-10690312)
chr3 (153-207)||(15505775-15505829)
chr3 (142-180)||(16192762-16192800)
chr3 (144-186)||(27097065-27097107)
chr3 (143-192)||(27764716-27764766)
chr3 (142-229)||(28918010-28918099)
chr3 (142-202)||(3618890-3618948)
chr3 (161-214)||(3631712-3631765)
chr3 (142-191)||(9800049-9800098)
chr3 (142-191)||(15796295-15796344)
chr3 (142-179)||(25652044-25652081)
chr3 (142-207)||(26492190-26492255)
chr3 (167-207)||(2941592-2941632)
chr3 (142-178)||(21211297-21211333)
chr3 (151-207)||(35222956-35223012)
[»] chr2 (40 HSPs)
chr2 (142-218)||(18840987-18841063)
chr2 (142-229)||(5367201-5367288)
chr2 (142-215)||(2415326-2415399)
chr2 (142-207)||(40361739-40361804)
chr2 (142-198)||(34691799-34691855)
chr2 (142-198)||(34714211-34714267)
chr2 (142-229)||(2438682-2438769)
chr2 (113-188)||(30527599-30527673)
chr2 (107-229)||(30404813-30404934)
chr2 (142-218)||(15972882-15972958)
chr2 (142-197)||(23921262-23921317)
chr2 (142-212)||(18276530-18276600)
chr2 (142-184)||(22084840-22084882)
chr2 (107-189)||(23718001-23718082)
chr2 (107-189)||(24105673-24105754)
chr2 (142-218)||(1327987-1328061)
chr2 (142-191)||(42832277-42832326)
chr2 (142-191)||(44860329-44860378)
chr2 (116-180)||(15909644-15909707)
chr2 (151-207)||(20242712-20242768)
chr2 (142-218)||(37411218-37411294)
chr2 (142-190)||(39279684-39279732)
chr2 (148-191)||(35056883-35056926)
chr2 (142-180)||(21616771-21616809)
chr2 (119-197)||(37491850-37491927)
chr2 (146-192)||(38355887-38355933)
chr2 (145-183)||(41942117-41942155)
chr2 (142-191)||(12668424-12668473)
chr2 (146-191)||(13273019-13273064)
chr2 (142-191)||(18889592-18889641)
chr2 (113-178)||(21782832-21782896)
chr2 (142-191)||(24975326-24975375)
chr2 (142-175)||(25544490-25544523)
chr2 (142-191)||(31026704-31026753)
chr2 (142-179)||(31456654-31456691)
chr2 (142-195)||(44605136-44605189)
chr2 (142-214)||(6940264-6940336)
chr2 (142-186)||(12940941-12940985)
chr2 (181-229)||(27084317-27084365)
chr2 (161-213)||(28596497-28596549)
[»] scaffold0050 (1 HSPs)
scaffold0050 (142-229)||(70287-70374)
[»] scaffold0697 (1 HSPs)
scaffold0697 (142-213)||(1653-1724)
[»] scaffold0049 (2 HSPs)
scaffold0049 (142-197)||(63782-63837)
scaffold0049 (143-175)||(56932-56964)
[»] scaffold0020 (1 HSPs)
scaffold0020 (113-191)||(135313-135390)
[»] scaffold0011 (1 HSPs)
scaffold0011 (142-192)||(240021-240071)
[»] scaffold0036 (1 HSPs)
scaffold0036 (142-191)||(9748-9797)
[»] scaffold0652 (1 HSPs)
scaffold0652 (142-218)||(436-512)
[»] scaffold0039 (1 HSPs)
scaffold0039 (144-192)||(84973-85021)
[»] scaffold0123 (1 HSPs)
scaffold0123 (145-188)||(44529-44572)
[»] scaffold0044 (1 HSPs)
scaffold0044 (142-189)||(53189-53236)
[»] scaffold0004 (1 HSPs)
scaffold0004 (142-177)||(92816-92851)
[»] scaffold1528 (1 HSPs)
scaffold1528 (113-190)||(1016-1092)
[»] scaffold0376 (1 HSPs)
scaffold0376 (142-191)||(6321-6370)
[»] scaffold0027 (1 HSPs)
scaffold0027 (142-191)||(46691-46740)
[»] scaffold0083 (1 HSPs)
scaffold0083 (161-229)||(45493-45561)


Alignment Details
Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 26314808 - 26314574
Alignment:
Q  18 gtttagcacaattcgacaaatacatggggtttaaatatgatcatacatggtgttgatccgtgacctatcaaacatgaatacggctacctgacataacaca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |||| || |||    
T  26314808 gtttagcacaattcgacaaatacatggggtttaaatatgatcatacatggtgttgatccgtgacctatgaaacatgaatacggatatcagacacaataca 26314709  T
Q  118 gacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggg 217  Q
    |||| |||||||||||||||| |||||||||||| ||||| |||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||      
T  26314708 gacagtgagacaccgatactgctaaataatttgaaaaaatcatataattcaatgtaattatatatgtcggggtcagatacgacacttgtccaacaccgaa 26314609  T
Q  218 ataagcctaatcaaaaaagtgttcgtgtacttcat 252  Q
    | |||| ||||| ||||||||||||||||||||||    
T  26314608 acaagcttaatcgaaaaagtgttcgtgtacttcat 26314574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 7265643 - 7265556
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||||| ||||| | || ||||| ||||||| ||| ||||||||    
T  7265643 aataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatc 7265556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 9658888 - 9658962
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgg 216  Q
    |||||||| ||||||| | |||||||||||||||||||| ||||||||| ||||||||||| ||||  |||||||    
T  9658888 aataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgacaccgg 9658962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 19040361 - 19040430
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaac 211  Q
    |||||||||||||||| | |||||||||||||||||||| |||| ||||| |||||||||| ||| ||||    
T  19040361 aataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacacatgttcaac 19040430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 28152108 - 28152194
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| |||||||||| ||||| ||||||||| | ||||||||    
T  28152108 aataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatc 28152194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 28715304 - 28715390
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaat 228  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| |||||||||| ||| | ||||||||| | |||||||    
T  28715304 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaat 28715390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 31579275 - 31579208
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaac 211  Q
    |||||||||||||||| | |||||||||||||||  ||| |||||||||| |||||||||| ||||||||    
T  31579275 aataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacacgacacatgtccaac 31579208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 33001339 - 33001241
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaaagtgtt 240  Q
    |||||||||| ||||| | |||||| | ||||||||||| |||||||||| |||||||||| ||||  ||||||  ||| |||||||| ||| ||||||    
T  33001339 aataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtt 33001241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 7996428 - 7996379
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  7996428 aataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 7996379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 8022373 - 8022422
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  8022373 aataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 8022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 9025544 - 9025495
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  9025544 aataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 13360420 - 13360367
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||| | |||||||||||||||||||| | ||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgtttcggtgtcagacac 13360367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 7377991 - 7378047
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    ||||||||||||| | |||||||| ||||||||||| |||||||||| |||||||||    
T  7377991 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgaca 7378047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 13364754 - 13364698
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacga 199  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||  |||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttggacacga 13364698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 34595143 - 34595219
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| |||||||||| ||||  |||||||||    
T  34595143 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccggga 34595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 21924985 - 21924930
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    ||||||||||||| || | |||||||||||||||||||| |||||||||| |||||    
T  21924985 aataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 11784266 - 11784216
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||||||||||||| | || | |||||||||||||||||||||||||||    
T  11784266 aataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtgtca 11784216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 7569218 - 7569181
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||||||||||| |||||||||||||||||||    
T  7569218 aataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 9195804 - 9195755
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||| ||||||||||||| ||||||||||    
T  9195804 aataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtc 9195755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 9617443 - 9617492
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  9617443 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 9629392 - 9629441
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9629441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 5732560 - 5732504
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||||||||| | ||| || ||||||||||||| |||||||||| ||||||    
T  5732560 aataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 7086804 - 7086852
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||| | |||||| ||||||||||||| |||||||||    
T  7086804 aataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 13851745 - 13851801
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||||||||| |  ||||||||||||||||||| ||||| |||| ||||||    
T  13851745 aataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 13851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 23771598 - 23771646
Alignment:
Q  153 aaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    ||||||||||| ||||||||||||| | ||||||||||| |||||||||    
T  23771598 aaaattatatacttcagtgtaattacaaatgtcggtgtcggacacgaca 23771646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 33419182 - 33419270
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagaca-cgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||| | |||||||||| ||||||||||| ||| ||||||||||| | || | ||||||||||| ||| | ||||||||    
T  33419182 aataatttgaaaaattgatataattcaatgtaattatatgtgttggtgtcagacaccaacgcgtgtccaacaccaggacatgcctaatc 33419270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 677818 - 677884
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatat 180  Q
    ||||||||||||| || |||| |||||||| |||||||||||||| |||||||  |||||| ||||||    
T  677818 acacagacactgacacgccgacactgttaa-taatttgagaaaatcatataatatagtgtatttatat 677884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 7938125 - 7938180
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||| ||||| |||||||| ||||||||||||  |||||||||| |||||    
T  7938125 aataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacac 7938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 7977880 - 7977825
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||| ||||||| ||||||||||||||||| |  |||||||||| |||||    
T  7977880 aataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 1532249 - 1532287
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  1532249 aataatttgataaaattacataattcagtgtaattatat 1532287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 5462695 - 5462737
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgt 184  Q
    |||||||||||||||| | |||||||| |||||||||||||||    
T  5462695 aataatttgagaaaatcacataattcattgtaattatatatgt 5462737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 19044473 - 19044523
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    ||||||||||||| || | |||||||||||| ||||||| |||||||||||    
T  19044473 aataatttgagaatatcacataattcagtgttattatatgtgtcggtgtca 19044523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 25038121 - 25038075
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggt 188  Q
    |||||||||||||||||| |||||| |||||||||| | ||||||||    
T  25038121 aataatttgagaaaattacataatttagtgtaattacaaatgtcggt 25038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 26562701 - 26562747
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||| | |||||||||||||||||||| ||||| ||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 26562747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 27904067 - 27904029
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacga 199  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  27904067 ataattcagtgtaattacaaatgtcggtgtcagacacga 27904029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 34895084 - 34895034
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||||||||||||||||| ||||||||||||| |||  |||| ||||||    
T  34895084 aataatttgagaaaattatacaattcagtgtaatcataggtgtcagtgtca 34895034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 6898331 - 6898258
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccg 215  Q
    ||||||||||  |||||| |||||| |||||||||| |  |||||||||| |||||||  | ||||||||||||    
T  6898331 aataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccg 6898258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 7723300 - 7723251
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| |||||||||||  ||||||||| | ||||||||    
T  7723300 aataatttgagaaaatcatataattcagcataattatatgtatcggtgtc 7723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 7740649 - 7740710
Alignment:
Q  141 aaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||||||| |||||| | | |||| ||||||||||||| |||| ||||| ||||||||||    
T  7740649 aaataatttgtgaaaatcacaaaattgagtgtaattatatgtgtcagtgtcggacacgacac 7740710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 8389522 - 8389485
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  8389522 aataatttaagaaaatcatataattcagtgtaattata 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 9027187 - 9027236
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||| ||| | ||||||| |||||||||||| ||||||||||    
T  9027187 aataatttgagataatcacataattccgtgtaattatatgtgtcggtgtc 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    ||||||||||||| | |||||||||||||||||||| |||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 12627627 - 12627554
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccg 215  Q
    |||||| ||| ||||| | ||||||||||||||| |||| ||||| |||| ||||| |||| ||||| ||||||    
T  12627627 aataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcggacaccacacatgtccgacaccg 12627554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 19602231 - 19602198
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaat 175  Q
    |||||||||||||||| |||||||||||||||||    
T  19602231 aataatttgagaaaatgatataattcagtgtaat 19602198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 30866194 - 30866149
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcgg 187  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||    
T  30866194 aataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 32298638 - 32298585
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacacc 214  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||  |||||||||||    
T  32298638 ataatttagtgtaattatatgtgttggtgtcagacatgacatatgtccaacacc 32298585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 34073397 - 34073348
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||||   ||||||||||||||||||||  |||||||||    
T  34073397 aataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtc 34073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 15443704 - 15443752
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||| | |||||||| | ||||||||||||| |||||    
T  15443704 aataatttgagaaaataacataattcaatataattatatatgttggtgt 15443752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 16833317 - 16833377
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||||||| ||||| | ||| ||||||||||||| |  ||||||||| |||||||||||    
T  16833317 aataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgttagacacgacac 16833377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 21142127 - 21142171
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||||||||||| |||||||||||| || |||||| |||||    
T  21142127 aataatttgagaaaatcatataattcagtctagttatatgtgtcg 21142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 24614419 - 24614475
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||| | |||||||||||||| ||||||||| ||| ||| |||||| ||||||    
T  24614419 aataatttaaaaaaattatataatttagtgtaattgtatgtgttggtgtcggacacg 24614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 24832597 - 24832641
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    ||||||||||||||||  ||||||| ||||||||||||| |||||    
T  24832597 aataatttgagaaaatcttataatttagtgtaattatatgtgtcg 24832641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  163 aattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    |||||| ||||||||||| |||||||||| |||||||||| ||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 33817958 - 33817998
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatat 182  Q
    ||||||| |||||||||  ||||||||||||||||||||||    
T  33817958 aataattggagaaaatttcataattcagtgtaattatatat 33817998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 28674809 - 28674901
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaa 234  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| | || | |||||||| ||||    
T  28674809 aataatttgagaaaattacataattcagtataattatatatgttggtgtcagacacgacacttgtccaacactgagacacgcctaatctaaaa 28674901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 5898350 - 5898240
Alignment:
Q  107 gacataacacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgt 206  Q
    ||||| |||||||||||||||| |||| || | ||| |||| ||| ||||| | ||||||||||||||||||||  |||||||||||||||||||| |||    
T  5898350 gacatgacacagacactgagacgccgacaccgctaa-taatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgt 5898252  T
Q  207 ccaacaccggga 218  Q
    ||||||||||||    
T  5898251 ccaacaccggga 5898240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 40181880 - 40181967
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||| | |||||||||||||||||||| | |||||||| ||||| |||| ||||| ||||||||| | ||||||||    
T  40181880 aataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatc 40181967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 2896171 - 2896074
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaaagtgt 239  Q
    |||||||||||||||| | |||||||||||||  ||||||||||||||||||||||||||  ||||| | ||||||| |  ||||||| || ||||||    
T  2896171 aataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaatccaagaagtgt 2896074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 40258983 - 40258896
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  ||||||||||||||||||||| ||||| ||||| ||| | ||||||||    
T  40258983 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatc 40258896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 16927235 - 16927178
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacga 199  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  16927235 aataatttgaaaaaatcatataattcagtgtaattatatatgttggtgtcagatacga 16927178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 18190158 - 18190082
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||| ||||||| ||||||||||||||||| |  ||||| |||||||||| |||| ||||| |||||||||    
T  18190158 aataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccggga 18190082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 23636096 - 23636044
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    ||||||||||||||| |||||||||||||||| ||| ||||||||||||||||    
T  23636096 aatttgagaaaattacataattcagtgtaattgtatgtgtcggtgtcagacac 23636044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 39130817 - 39130757
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  39130817 aataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacacaacac 39130757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 36878470 - 36878541
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||||||||||||||| | |||||||||||||||||||  |||||||||| ||||||| || ||||| ||||    
T  36878470 aataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatgtccgacac 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 37055940 - 37055871
Alignment:
Q  107 gacataacacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaatta 177  Q
    ||||| ||||||||||||| ||| |||||||| ||| |||||||||||||||| |||||| ||||||||||    
T  37055940 gacatgacacagacactgatacatcgatactgctaa-taatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 38503329 - 38503378
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  38503329 aataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 43492542 - 43492457
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||| |  |||||| |||||||||| | |||||||||||||||| |||| ||||| ||||||| | | ||||||||    
T  43492542 taatttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatc 43492457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 52903230 - 52903314
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||| |||||| | || ||||||| ||||| |||||| | ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  52903230 acacggacactaacacgccgataccgttaa-taatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 1815285 - 1815353
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||||||||||| |  |||||||||| |||||||||| ||||| ||||||||| | ||||||||    
T  1815285 ataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatc 1815353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 1864930 - 1864882
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||||    
T  1864930 aataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 44482240 - 44482288
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 44482288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 21530698 - 21530769
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||||||||||||||| ||||||||  || ||||||||  |||||||||| |||||||||| ||||| ||||    
T  21530698 aataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacac 21530769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 14332692 - 14332634
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgac 200  Q
    |||||||||||||||| | |||||| ||||||||||||| | |||||||| ||||||||    
T  14332692 aataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacgac 14332634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 48148076 - 48148038
Alignment:
Q  153 aaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  48148076 aaaatcatataattcagtgtaattatatatgtcggtgtc 48148038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 7918261 - 7918212
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||||||||||||||| |||| |||||    
T  7918261 aataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtc 7918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 24462715 - 24462678
Alignment:
Q  153 aaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||||||||||||||| |||||||||    
T  24462715 aaaattatataattcagtgtaattatatctgtcggtgt 24462678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 1486759 - 1486667
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg-----gtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | |||||||||||||||||||  |||||     ||||| |||||||||| ||||| ||||||||| | ||||||||    
T  1486759 aataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatc 1486667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 9709829 - 9709885
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||||||||| | |||||||  ||||||||||| |||||||||| ||||||    
T  9709829 aataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacg 9709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 18337338 - 18337414
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| ||||| |||| ||||| |||| ||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactggga 18337414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 25361896 - 25361944
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||| | |||||||||||||||||||| |||| |||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtc 25361944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 29163421 - 29163329
Alignment:
Q  152 gaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaaagtgttcgtg 244  Q
    |||||| | |||||||| | ||||||||| |||||||||| |||||||||| || |  ||||||||| | | ||||||| | |||||||||||    
T  29163421 gaaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtg 29163329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 41877520 - 41877464
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||||||||||| |||||| |||||||||| |  |||||||||| ||||||    
T  41877520 aataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 49872850 - 49872890
Alignment:
Q  146 atttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  49872850 atttgagaaaactatataattcagtgtaattatatgtgtcg 49872890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 7353541 - 7353494
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||| || ||||||| |||||| ||||||||||||||||||||||||    
T  7353541 taattcgaaaaaattacataatttagtgtaattatatatgtcggtgtc 7353494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 22907389 - 22907318
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||||||||||||||||||||||||  || ||||||||  |||||||||  ||||| |||| ||||| ||||    
T  22907389 aataatttgagaaaattatataatttggtataattataagtgtcggtgtgggacacaacacatgtccgacac 22907318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 27471644 - 27471566
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    ||||| ||||||| |||||||||| | ||| |||||||||||||  | ||||||||||||||||| || ||| |||||||    
T  27471644 acacaaacactgacacaccgataccgctaa-taatttgagaaaagcacataattcagtgtaattacatgtgttggtgtca 27471566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 34371728 - 34371771
Alignment:
Q  148 ttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| | |||||||||||||||||||| ||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 34371771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 37598841 - 37598927
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | | |||||||||||||||||  |||||||||| |||||||||| ||||| |||  |||| | ||||||||    
T  37598841 aataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatc 37598927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 6612249 - 6612172
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||| |||| ||| || ||||||| ||||| |||||||| ||||||| ||||||||||||||||| |  ||||||||||    
T  6612249 acacggacaatgacacgccgatacagttaa-taatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 6612172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 13997867 - 13997964
Alignment:
Q  116 cagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacacc 214  Q
    |||||||||| || |||| || ||||| || ||| | ||||| | |||||||||||||||||||| |||||||||  || ||||||| |||| ||||||    
T  13997867 cagacactgacacgccgacaccgttaatta-tttaaaaaaatcacataattcagtgtaattatatgtgtcggtgttggagacgacacatgtcaaacacc 13997964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 30749858 - 30749904
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    ||||||| | |||||||||||||||||||| |||||||||| |||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 30771309 - 30771355
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    ||||||| | |||||||||||||||||||| |||||||||| |||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 2784552 - 2784620
Alignment:
Q  128 caccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||| || |||||| ||||| ||||||| | |||||| ||| ||||||||| ||||||||||||||||    
T  2784552 caccgacaccgttaaa-aatttaagaaaatcacataattgagtataattatatgtgtcggtgtcagacac 2784620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 6427359 - 6427408
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||| ||||||||||| ||| ||||||    
T  6427359 aataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtc 6427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 8010337 - 8010300
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  8010337 aataatttgaaaaaattatataattcagtataattata 8010300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 9629950 - 9629901
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| |||||||||||||| ||||||  ||||||||||    
T  9629950 aataatttgataaaatcatataattcagtgtgattataagtgtcggtgtc 9629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 9828053 - 9828102
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| | |||||||||||||||| ||| ||||||||||    
T  9828053 aataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtc 9828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 17754292 - 17754368
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||| |||| ||||||| || | ||| |||||||| ||||||| |||||||||||||| ||||| |||| ||||    
T  17754292 acacagacgctgacacaccgacaccgctaa-taatttgaaaaaattacataattcagtgtaactatatgtgtcagtgt 17754368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Original strand, 19324572 - 19324609
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatat 180  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatat 19324609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 20157400 - 20157351
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||| ||||||||| | ||||||||||||||| |||| ||||||||||    
T  20157400 aataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 20157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 25098604 - 25098567
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatat 180  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattatat 25098567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 34298445 - 34298482
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||||||||| | |||||||||||||||||||    
T  34298445 aataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 34712433 - 34712384
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||| ||||||||||||| |||| |||||    
T  34712433 aataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtc 34712384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 41017454 - 41017405
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||| | ||||||||||||||| ||||||    
T  41017454 aataatttgagaaaatgacataatttaatgtaattatatatgttggtgtc 41017405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 10233262 - 10233310
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    ||||| |||||||||| | |||||||||||||||||||| |||| ||||    
T  10233262 aataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 10572639 - 10572591
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||| | ||||||| ||||||||| || |||||||||    
T  10572639 aataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgt 10572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 13436467 - 13436523
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||| || |||| | |||||||||||||||||||| ||| |||||| ||||||    
T  13436467 aataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 25452198 - 25452145
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    ||||||||||||||||   |||||||||||||||  ||| ||||||||||||||||    
T  25452198 aataatttgagaaaatctcataattcagtgtaat--tatgtgtcggtgtcagacac 25452145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 51410053 - 51410121
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||||||||||| |  |||||||||| |||||||||| | ||| |||||| || | ||||||||    
T  51410053 ataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatc 51410121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 90824 - 90924
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaaca 212  Q
    ||||||||||||| ||||| | ||  |||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||| |||    
T  90824 acacagacactgacacaccaacaccattaa-taatttgagaaaatcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgaca 90922  T
Q  213 cc 214  Q
    ||    
T  90923 cc 90924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 8423768 - 8423681
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||||  ||||| ||||||||| | ||||||||    
T  8423768 aataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatc 8423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 8402787 - 8402721
Alignment:
Q  147 tttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    ||||||||||| |||||||||||||||||||||| | || |||||||||||||||||||||| ||||    
T  8402787 tttgagaaaatcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacac 8402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 37698721 - 37698762
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37698721 aataatttgagaaaattatataattcagtgtaattatatatg 37698762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 35158035 - 35157961
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgg 216  Q
    |||||||||  ||||| | |||||| ||||||||||||  |||||||||| |||||||||| |||||||||||||    
T  35158035 aataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccgg 35157961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 54580073 - 54580007
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtcc 208  Q
    |||||||||| ||||| | |||||||||||||||||||  |||||||||| |||||||||| |||||    
T  54580073 aataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtcc 54580007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 49431054 - 49431111
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    ||||||||||||||||| |  |||||||||| |||||||||| |||||||||||||||    
T  49431054 ataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccggga 49431111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 29205453 - 29205529
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||  |||||||||| ||||| |||||||||    
T  29205453 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccggga 29205529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 9996849 - 9996920
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||||||||||||||| | |||||||||| ||||||||| | |||||||||||||  |||| ||||| ||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacac 9996920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 21345583 - 21345496
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | |||| ||| |||||| || |||||||||||||||||||| || | ||||||||||| | | ||||||||    
T  21345583 aataatttgaaaaaataacataactcaatgtaatcatttatgtcggtgtcagacacgatacatatccaacaccggtacatgcctaatc 21345496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 5775408 - 5775358
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||||||||||||| | |||||| ||||||||||||| |||||||||||    
T  5775408 aataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtca 5775358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 20950456 - 20950406
Alignment:
Q  163 aattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||    
T  20950456 aattcagtgtaattatatgtgtcggtgtcagacacgatacatgttcaacac 20950406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 30982877 - 30982815
Alignment:
Q  182 tgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaaagtgttcgtg 244  Q
    ||||||||||||||||||||| ||||| ||||||||| | |||||||| ||| ||||| ||||    
T  30982877 tgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtg 30982815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 903897 - 903969
Alignment:
Q  107 gacataacacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatat 180  Q
    ||||||| || |||||||| ||||||  || ||||| |||||||||||||| | ||||||||||||||||||||    
T  903897 gacataaaacggacactgacacaccggcaccgttaa-taatttgagaaaatcacataattcagtgtaattatat 903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 15835712 - 15835632
Alignment:
Q  118 gacactgagacaccgatactgttaaataatttgagaaaa-ttatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    ||||| || ||||||| |||||||| |||||||| |||| ||||||||||| ||||||| |||| ||| |||||||||||||    
T  15835712 gacacagacacaccgacactgttaa-taatttgaaaaaaattatataattccgtgtaatcatatgtgttggtgtcagacacg 15835632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 21945512 - 21945585
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccg 215  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| |||| ||||| ||||| ||||||    
T  21945512 aataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccg 21945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 24343516 - 24343553
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24343516 aataatttgagaaaattacataattcagtgtaattata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 21539917 - 21539865
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcaga 194  Q
    |||||||| ||||||| |||||||| ||||||||||||||| || ||||||||    
T  21539917 aataatttaagaaaatcatataatttagtgtaattatatatatccgtgtcaga 21539865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 30103407 - 30103348
Alignment:
Q  141 aaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    ||||||||||||||||| | |||||| |||||||| |||| ||||||||||| ||||||||    
T  30103407 aaataatttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgtcaaacacgaca 30103348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 40179686 - 40179626
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||| ||||| ||||| | ||||||||||||||||||||  ||||||||| ||||||||||    
T  40179686 aatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacac 40179626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 56257942 - 56257978
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattat 178  Q
    |||||||||||||||| ||||||||||||||||||||    
T  56257942 aataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 12797387 - 12797301
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| ||||||| || ||||  ||||||||| ||| ||||||    
T  12797387 aataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatc 12797301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 28964298 - 28964211
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||| ||||| |||||||||| | ||| |||| |||| | ||||||||    
T  28964298 aataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatc 28964211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 33950145 - 33950200
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||| | |||||| | |||||| |||| ||||||||||||||||    
T  33950145 aataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacac 33950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 7214572 - 7214489
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||| | |||||| | |||||||||||  ||||||||    |||||||| ||||| ||||||||| | ||||||||    
T  7214572 aataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgt----cacgacacatgtccgacaccgggaaatgcctaatc 7214489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 22440650 - 22440612
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  22440650 aataatttgagaaaatcacataattcagtgtaattatat 22440612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 36635333 - 36635371
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  36635333 aataatttgagaaaatcacataattcagtgtaattatat 36635371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 1213260 - 1213227
Alignment:
Q  153 aaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||||||||||||||||||||||| |||||    
T  1213260 aaaattatataattcagtgtaattatatgtgtcg 1213227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 4672135 - 4672086
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||| |||||||| |||||||||||||  ||||| ||||||||||    
T  4672135 aataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtc 4672086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 6273953 - 6273990
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  6273953 aataatttgagaaaatgatataatttagtgtaattata 6273990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 18576086 - 18576037
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    ||||||||||||||| | ||||||| |||||||||||| ||| |||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtgttggtgtca 18576037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 21720557 - 21720508
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| |||||||| | ||||| ||||||||||||||||    
T  21720557 aataatttgataaaatcatataatttaatgtaactatatatgtcggtgtc 21720508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 30838219 - 30838256
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  30838219 aataatttgataaaattatataatttagtgtaattata 30838256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 40613459 - 40613504
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcgg 187  Q
    |||| ||||||||||| | |||||||||||||||||||| ||||||    
T  40613459 aatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 40742600 - 40742649
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| |||||||  ||||||||||||| ||||| ||||    
T  40742600 aataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtc 40742649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 999398 - 999354
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    ||||||||||| |||| |||||||| ||||||||||||| |||||    
T  999398 aataatttgagtaaatcatataatttagtgtaattatatgtgtcg 999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 16189721 - 16189765
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggtg 189  Q
    ||||||||||||| | |||||||||||||||||| | ||||||||    
T  16189721 aatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 32910560 - 32910596
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattat 178  Q
    |||||||||||||||| | ||||||||||||||||||    
T  32910560 aataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 38847062 - 38846990
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacacc 214  Q
    |||||||||| ||||| |||| |||||||||||||| |  |||| ||||| || ||||||| ||||| |||||    
T  38847062 aataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcggatacgacacgtgtccgacacc 38846990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 43300021 - 43299973
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||||| |||||||| |||||| |||| || ||||||    
T  43300021 aataatttgagaaaattacataattcaatgtaatcatatctgccggtgt 43299973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 43300625 - 43300669
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||||||||||||| |||||||| |||||| |||| |||||    
T  43300625 aataatttgagaaaattacataattcaatgtaatcatatttgtcg 43300669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 14134708 - 14134774
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtcc 208  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  14134708 aataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtcc 14134774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 12606879 - 12606825
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagaca 196  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  12606879 aataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtcagaca 12606825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 40332199 - 40332276
Alignment:
Q  141 aaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    ||||||||||||||||| | ||||||||||||||||| |  |||||||||  |||||||||| ||||| |||||||||    
T  40332199 aaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccggga 40332276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 7658472 - 7658520
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||    
T  7658472 aataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 20679445 - 20679369
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||||||||| | ||| |||||||||||||||  |||||||||||||| | |||| ||||| |||||||||    
T  20679445 aataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccggga 20679369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 3025560 - 3025625
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    |||||||||||||||| | |||||||||||||||||||  |||| ||||| |||||||||| ||||    
T  3025560 aataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtc 3025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 33405434 - 33405369
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    |||||||||||||||  | |||||| ||||||||||||| |||||||||| |||||||||| ||||    
T  33405434 aataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtc 33405369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 13203650 - 13203694
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||    
T  13203650 aataatttgagaaaattacataattcagtgtaattatatacgtcg 13203694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 4786388 - 4786329
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    |||||||| ||||||| | |||||||||||||||||||| |||||||||| || ||||||    
T  4786388 aataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcggatacgaca 4786329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 12985401 - 12985456
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||||||| |||||    
T  12985401 aataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 13844646 - 13844591
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||| | |||||| ||||||||||||| |||||||||| |||||    
T  13844646 aataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 31557006 - 31557092
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  | ||||||||||||||||||| ||||| ||||| ||| | ||||||||    
T  31557006 aataatttga-aaaatcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacacgcctaatc 31557092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 34897094 - 34897149
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||| | |||||||||||||||||||| ||||| |||| |||||    
T  34897094 aataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 14634188 - 14634142
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||    
T  14634188 aatttaagaaaattatataattcagtgtaattatatttgttggtgtc 14634142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 11927136 - 11927087
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| | |||||||||||||||||||| ||||||||||    
T  11927136 aataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtc 11927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 31236627 - 31236570
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacga 199  Q
    |||||||||||||||| | |||||||| ||||||||||| |||||||| | |||||||    
T  31236627 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 926838 - 926762
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    ||||||||||||||||   ||  |||||||||||||||  |||||||||| ||| |||||| ||||| |||||||||    
T  926838 aataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccggga 926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 4122299 - 4122251
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    ||||||| || |||||||||||||||| ||||||||||| |||||||||    
T  4122299 aataattagataaaattatataattcattgtaattatatgtgtcggtgt 4122251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 4611543 - 4611590
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtg 189  Q
    |||||||||||||||| | |||||||||||||||||||| | ||||||    
T  4611543 aataatttgagaaaataacataattcagtgtaattatatgtctcggtg 4611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 11803246 - 11803316
Alignment:
Q  119 acactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    ||||||| |||| || |||||||| |||||| ||||||| | |||||||||||||||||||| ||| |||||    
T  11803246 acactgatacactgacactgttaa-taatttaagaaaatcacataattcagtgtaattatatgtgttggtgt 11803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 12559156 - 12559118
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  12559156 aataatttgagaaaatgatataattcagtgtaatcatat 12559118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 24669414 - 24669491
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||| || | || || ||||| ||||||||| |||||| ||||||||||||||||| |  ||||||||||    
T  24669414 acacagacactgacacgctgacaccgttaa-taatttgaggaaattacataattcagtgtaattacaagtgtcggtgtc 24669491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 33382069 - 33382019
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||||| ||||||| | ||||||||| |||||||||| |||||||||||    
T  33382069 aataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtca 33382019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 38079009 - 38079083
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggg 217  Q
    ||||||| ||||||| | || |||||||||||||||||  |||| |||| |||||||| | ||||| ||||||||    
T  38079009 ataatttaagaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccggg 38079083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 4948661 - 4948718
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacga 199  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| |||||||    
T  4948661 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 11944674 - 11944723
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| | |||| ||||||||||||||| ||||||||||    
T  11944674 aataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtc 11944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 126369 - 126321
Alignment:
Q  170 tgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    ||||||||||| |||| ||||| |||||||||| ||||||| |||||||    
T  126369 tgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccggga 126321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 3951561 - 3951521
Alignment:
Q  167 cagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    ||||||| |||||| ||||||||||||||||||||| ||||    
T  3951561 cagtgtacttatatgtgtcggtgtcagacacgacacgtgtc 3951521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 8293854 - 8293894
Alignment:
Q  162 taattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    ||||||||||||||||||| ||||||||||| ||| |||||    
T  8293854 taattcagtgtaattatatgtgtcggtgtcaaacatgacac 8293894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 26902216 - 26902176
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||| | |||||||||||||||||||| ||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 26902176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 21880161 - 21880248
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||||| ||||||||||||||||| |  |||||||||| |||||||||| ||||| ||||| ||| | ||||||||    
T  21880161 aataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatc 21880248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 33994240 - 33994324
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaaagtgttcgtgt 245  Q
    ||||||||||| ||||| |  ||||||||||||||||||||| |||||||||||| || | |||||||| ||  |||||||||||    
T  33994240 ataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgt 33994324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 5835256 - 5835315
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    |||| ||||||||||| | |||||||||||||||||||| ||||||||||||||| ||||    
T  5835256 aatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtcagacatgaca 5835315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 20549772 - 20549866
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtcc 208  Q
    ||||| ||||||| ||||||| || | ||| |||||||||||||| |  ||||||||||||||||||| |||||||||| ||||| |||| |||||    
T  20549772 acacatacactgacacaccgacaccgctaa-taatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtcc 20549866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 22484006 - 22484100
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtcc 208  Q
    ||||||||||||| || |||| || | ||| |||||| ||||||||  |||||||||| ||||||||| ||||||||||||||| ||||| |||||    
T  22484006 acacagacactgacacgccgacaccgctaa-taattttagaaaattgcataattcagtataattatatgtgtcggtgtcagacatgacacatgtcc 22484100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 39138462 - 39138529
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||| || |||| ||||| ||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacgggga 39138529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 5235995 - 5236044
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  5235995 aataatttaagaaaattatataatttagtgtaattatatatatcggtgtc 5236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 598217 - 598304
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||| ||||||| |  ||||| | ||||||| ||  ||||||||||||||||||||| ||||| ||||||||| | ||||||||    
T  598217 aataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatc 598304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 3554555 - 3554496
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    ||||||| ||||||||| |||||| | |||||||||| ||||||||||| ||||||||||    
T  3554555 ataatttaagaaaattacataatttaatgtaattatagatgtcggtgtcggacacgacac 3554496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 9482944 - 9483003
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    ||||||||||||||| | | |||||||||||||||||| |||||||||| ||| ||||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacgcgacac 9483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 22602762 - 22602711
Alignment:
Q  140 taaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||| |||||||||||| | |||||||||||||||||||| ||||||||||    
T  22602762 taaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 5233613 - 5233686
Alignment:
Q  116 cagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||| |||||||||| ||||| |||||||||||||| | |||||  ||||||||||||| ||| |||||    
T  5233613 cagacactgacacaccgatacggttaa-taatttgagaaaatcacataatctagtgtaattatatgtgttggtgt 5233686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 27732289 - 27732243
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggt 188  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||    
T  27732289 aataatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 640141 - 640182
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  640141 ataattcagtgtaattatatgtgtcggtgtcagatacgacac 640182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 7328741 - 7328692
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||| ||||||||||||| ||||||||||    
T  7328741 aataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtc 7328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 7758331 - 7758380
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||| |||||||||||||||||||| ||||||| | ||||||||||    
T  7758331 aataattttagaaaattatataattcagtataattatgtgtgtcggtgtc 7758380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 27945050 - 27945099
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||||| ||||||||||||||||| |  ||||||||||    
T  27945050 aataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtc 27945099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 3721102 - 3721158
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||||||||| | |||||| ||| ||||||||| |||||||||| ||||||    
T  3721102 aataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 5548686 - 5548734
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||| | |||||||||||||||||||| |||| |||||    
T  5548686 ataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtc 5548734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 23128711 - 23128663
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||  ||||||||||||||||| |||| |||||||||    
T  23128711 aataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgt 23128663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 23191905 - 23191980
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||||||||| | ||| ||||||||||||| || | || |||||||||||| ||| |||||||||| ||||    
T  23191905 aataatttgagaaaatcacatatttcagtgtaattacatgtttcagtgtcagacacg-cacgtgtccaacacaggga 23191980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 32287513 - 32287437
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||| ||||||||| | ||||||||||| || ||||| |||||||||| |||| ||||  ||||| |||||||||    
T  32287513 aataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccggga 32287437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 1401034 - 1401093
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    |||||||||||||| | | |||||||||||||||||||  | |||||||| |||||||||    
T  1401034 aataatttgagaaactcacataattcagtgtaattataagtatcggtgtccgacacgaca 1401093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 3520388 - 3520345
Alignment:
Q  146 atttgagaaaattatataattcagtgtaattatatatgtcggtg 189  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||    
T  3520388 atttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 4909160 - 4909215
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||||| |||||||| |||||| |||| |||| ||||| |||||    
T  4909160 aataatttgagaaaattacataattcattgtaatcatatgtgtcagtgtcggacac 4909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 8234155 - 8234242
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||| ||| |  || ||||||| |||||||||| ||||| |||||| || | ||||||||    
T  8234155 aataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaatc 8234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 17307904 - 17307951
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||| | |||||||||||||||||||| ||| ||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtc 17307951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 26022599 - 26022540
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    ||||||||||| || |||| ||||||||||||| ||||| ||||||||||  ||||||||    
T  26022599 aataatttgagcaagttatctaattcagtgtaactatatgtgtcggtgtcgaacacgaca 26022540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 27093463 - 27093404
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    |||||||| ||||||| | |||||| |||||||||||||  |||||||| ||||||||||    
T  27093463 aataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgaca 27093404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 27184838 - 27184897
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgaca 201  Q
    |||||||| ||||||| | |||||| |||||||||||||  |||||||| ||||||||||    
T  27184838 aataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgaca 27184897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 28155579 - 28155634
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||||| ||||||| ||||||||| |  |||||||||| |||||    
T  28155579 aataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacac 28155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 30813821 - 30813856
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaatta 177  Q
    |||||||||||||||||| |||||||||||||||||    
T  30813821 aataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 7197347 - 7197269
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggata 220  Q
    |||||||| | ||||| || ||||||| |||||||| |  |||||||||| ||||| |||| ||||| |||||||||||    
T  7197347 aataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacaccgggata 7197269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 15680837 - 15680891
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccg 215  Q
    |||||| ||||||||||||  |||||||||| |||||||||| ||||| ||||||    
T  15680837 ataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccg 15680891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 10478762 - 10478729
Alignment:
Q  153 aaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||||||||||||||||||||||| |||||    
T  10478762 aaaattatataattcagtgtaattatatgtgtcg 10478729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 16341505 - 16341554
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||| ||||||||||||| || |||||||    
T  16341505 aataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtc 16341554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 18013124 - 18013075
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||| | ||||||| |||||||||||||||||||| |||| |||||    
T  18013124 aataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtc 18013075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 18213074 - 18213025
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtcagacacgac 200  Q
    ||||||| | |||||| ||||||||||||| |||||||||| ||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgac 18213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 19206059 - 19206108
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||| | ||||||||| ||||||||||    
T  19206059 aataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 19992010 - 19992059
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | ||| |||||||||||||||  ||||||||||    
T  19992010 aataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc 19992059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 25239753 - 25239716
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  25239753 aataatttgagaaaattttataactcagtgtaattata 25239716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 32308129 - 32308178
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||||||||||| ||| |||| |||||    
T  32308129 aataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtc 32308178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 2424623 - 2424659
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattat 178  Q
    |||||||||||||||| | ||||||||||||||||||    
T  2424623 aataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 8239100 - 8239056
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||| |||||||  ||||||||||||||||||||| |||||    
T  8239100 aataatttaagaaaatcttataattcagtgtaattatatgtgtcg 8239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 11890969 - 11890933
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattat 178  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  11890969 aataatttgaaaaaatcatataattcagtgtaattat 11890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 12278844 - 12278888
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||| ||||||| | |||||||||||||||||||| |||||    
T  12278844 aataatttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 15902831 - 15902879
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||| ||||| | |||||| ||||||||||||| |||||||||    
T  15902831 aataatttgataaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 17851440 - 17851488
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||| ||||||| | |||||||||||||||||||| |||| ||||    
T  17851440 aataattttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 22868051 - 22868111
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||| ||||||||| | |||||||||||||||||||| |||| || ||| |||| ||||    
T  22868051 aataatatgagaaaatcacataattcagtgtaattatatgtgtcagtatcaaacacaacac 22868111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 29787419 - 29787383
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattat 178  Q
    |||||||||||||||| | ||||||||||||||||||    
T  29787419 aataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 12927663 - 12927734
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||| ||| ||||||    
T  12927663 aataatttgagaaaatcatataatttagtgtaattatatatgtcagtgtcagacatgacacgtgttcaacac 12927734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 30502438 - 30502351
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||| |  ||||||||||||||||||| |||||||||| |||||||||| ||||| |||| |||| | ||||||||    
T  30502438 aataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatc 30502351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 30542781 - 30542694
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||| |  ||||||||||||||||||| |||||||||| |||||||||| ||||| |||| |||| | ||||||||    
T  30542781 aataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatc 30542694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 32630785 - 32630719
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtcc 208  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||| || ||||||| |||||    
T  32630785 aataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtcc 32630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 23012458 - 23012382
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||||||||| |||||||| | ||||||||||| |||||||||  |||||||||| ||||  |||||||||    
T  23012458 aataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacacgacacatgtctgacaccggga 23012382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 28588724 - 28588664
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||||||||||||| | |||||||||||||||||||  |||||||||| ||||||||||    
T  28588724 aataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacac 28588664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 18421890 - 18421815
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    ||||||||||||||| | ||||| |||||||||||||| |||||| ||| |||||||||| |||||  ||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccggga 18421815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 27932244 - 27932330
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaat 228  Q
    |||||||||||||||||| ||||||||||||||||| | || | |||||| |||||||||| ||||  ||||| ||| | |||||||    
T  27932244 aataatttgagaaaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaat 27932330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 36838552 - 36838601
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  36838552 aataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtc 36838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 21191106 - 21191019
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| ||||| |||| ||||| || |||||| | ||||||||    
T  21191106 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatc 21191019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 26312777 - 26312835
Alignment:
Q  141 aaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacga 199  Q
    ||||||||||||||||| |  ||||||||||||||||||| | |||||||| |||||||    
T  26312777 aaataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgtcggacacga 26312835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 42893369 - 42893455
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaat 228  Q
    |||||||||| ||||| | ||||| ||||||||||| |  |||||||||||||||| |||| ||||| ||||| ||| | |||||||    
T  42893369 aataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaat 42893455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 3966512 - 3966561
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | | |||||||||||||||||| ||||||||||    
T  3966512 aataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 6035492 - 6035540
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  6035492 aataatttgagaaa-taatataattcagtgtaattatatttgtcggtgtc 6035540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 6471939 - 6471890
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||||||||||||||| ||| ||||||    
T  6471939 aataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtc 6471890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 22423862 - 22423813
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| | |||||||| | ||||||||||||||||||||    
T  22423862 aataatttgagaaaatcacataattcaatataattatatatgtcggtgtc 22423813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 25863213 - 25863250
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||||||||| |||||||||||||||||||||    
T  25863213 aataatttgagaaaatgatataattcagtgtaattata 25863250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 34879362 - 34879415
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    ||||||||||||| ||||||||||||||||| |||| ||||| |||| ||||||    
T  34879362 aatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacacg 34879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 16203845 - 16203785
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    ||||||||||||||||   |||||| ||||||||||||| |||||||||| |||| |||||    
T  16203845 aataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggacaagacac 16203785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 42126352 - 42126300
Alignment:
Q  160 tataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaaca 212  Q
    |||||||||||||||||||||||||  |||||| ||||||||  |||||||||    
T  42126352 tataattcagtgtaattatatatgttagtgtcaaacacgacatatgtccaaca 42126300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 2548396 - 2548451
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    ||||||| |||||||||| ||||||||||||||| |||  |||||||||| |||||    
T  2548396 aataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 10022642 - 10022681
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatat 182  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  10022642 ataatttgataaaatcatataattcagtgtaattatatat 10022681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 14873527 - 14873618
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca-----gacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||||||||  | |||||| ||||||||||||| |||||||||||     ||| | |||| ||||||||||||||| | ||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatc 14873618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 17593772 - 17593725
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtg 189  Q
    |||||||||||||||| |  ||||||||||||||||||||||| ||||    
T  17593772 aataatttgagaaaatcacgtaattcagtgtaattatatatgttggtg 17593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 21576795 - 21576708
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  ||||| |||| |||||||||| ||||  |||| |||| | ||||||||    
T  21576795 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatc 21576708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 33035887 - 33035813
Alignment:
Q  105 ctgacataacacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatat 180  Q
    ||||| |||||  |||||||| ||||||||||  |||| ||||||||  |||| ||||||||||||||||||||||    
T  33035887 ctgacgtaacatggacactgatacaccgataccattaa-taatttgaataaatcatataattcagtgtaattatat 33035813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 30098335 - 30098381
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggt 188  Q
    |||||||||||||||| | |||||||| |||||||||| ||||||||    
T  30098335 aataatttgagaaaatcacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 43564891 - 43564977
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||  ||||| | |||||| ||||||||||||  |||||||||| |||||||||  ||||| || |||||| | ||||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatc 43564977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 6326345 - 6326312
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaatta 177  Q
    |||||||||||||||| |||||||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaatta 6326312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 7997216 - 7997179
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  7997216 aataatttgagaaaatgatataatacagtgtaattata 7997179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 15086482 - 15086535
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||| |||||||  | ||||||||||| |||||||||| |||||    
T  15086482 taatttgagaaaatcatataatgtaatgtaattatatgtgtcggtgtctgacac 15086535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 39205889 - 39205938
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| ||||||||  |||||||||||| ||| ||||||    
T  39205889 aataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtc 39205938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 41091303 - 41091258
Alignment:
Q  146 atttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||| | |||||||||||||||||||| ||||| ||||    
T  41091303 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 41091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 41633744 - 41633793
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||| ||| ||||||||||||||||| | |||||||||||    
T  41633744 aataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtc 41633793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 6247631 - 6247687
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||| ||||| | ||||||||||||||||| |  |||||||||| ||||||    
T  6247631 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 8686635 - 8686698
Alignment:
Q  142 aataatttgagaaaattata--taattcagtgtaattatatatgtcggtgtcagacacgacact 203  Q
    |||||||||||||||| | |  || |||||||||||||||| |||||||||| ||||| |||||    
T  8686635 aataatttgagaaaatcacacatagttcagtgtaattatatttgtcggtgtctgacacaacact 8686698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 15410498 - 15410450
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||| |||||||||||| |||||||||||| |||| ||| |||||    
T  15410498 aataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgt 15410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 19737532 - 19737484
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||||||||||| |||||||| || ||| |||| |||||||||    
T  19737532 aataatttgagaaaattacataattcaatgcaatcatatgtgtcggtgt 19737484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 24273078 - 24273042
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||||||| | ||||||||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatat 24273042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 24389136 - 24389172
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||||||| | ||||||||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatat 24389172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 42029770 - 42029826
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    ||||||| | |||||||| ||||||||||| | |||||||| |||||||||| ||||    
T  42029770 agaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacacatgtc 42029826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 8039885 - 8039836
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8039885 aataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtc 8039836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 40993366 - 40993298
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||||||||||||| |||||||||| |||||||||| ||||| ||||||||| | ||||||||    
T  40993366 ataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatc 40993298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 8383266 - 8383322
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||||| ||||||    
T  8383266 aataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 8789599 - 8789540
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    ||||||||||||||| | ||||||| |||||||||||| |||||||||| ||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacac 8789540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 20691328 - 20691383
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||    
T  20691328 aataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacac 20691383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 45451562 - 45451635
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccg 215  Q
    |||||||||||||||| | ||| |||||| |||| |||| |||||||||| |||||||||| ||||| ||||||    
T  45451562 aataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacaccg 45451635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 7928459 - 7928515
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||| ||||| | |||||||||||||||||||| |||||||||| ||||||    
T  7928459 aataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 18426958 - 18427034
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||| | ||||| | ||||||| ||||||||||||||||||||||| || ||||||| |||||  ||||||||    
T  18426958 aataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccggga 18427034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 20503473 - 20503561
Alignment:
Q  141 aaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||||| ||||| | ||||||||||||||||| |  |||||||||  |||||||||| ||||  ||||||||| | ||||||||    
T  20503473 aaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatc 20503561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 25093483 - 25093582
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaaca 212  Q
    |||| |||||| | || |||| |||||||| | |||||||||||| | | |||||||||||||||||| |||||||||| ||||| |||| ||||| |||    
T  25093483 acactgacactaacacgccgacactgttaa-tgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgaca 25093581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 10954961 - 10955048
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||| | |  |||||||||| |||||||||| ||||| |||| |||| | ||||||||    
T  10954961 aataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatc 10955048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 11251987 - 11252051
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtcc 208  Q
    |||||||||||||||| | |||||||||||||||  ||| |||||||||||||||| |||| |||||    
T  11251987 aataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcagacacaacacgtgtcc 11252051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 7614481 - 7614416
Alignment:
Q  125 agacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||| || ||||| |||||| ||||||| | |||||||||| ||||||||||||||||||||    
T  7614481 agacaccgacacagttaa-taatttaagaaaatcacataattcagtataattatatatgtcggtgtc 7614416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 8842348 - 8842398
Alignment:
Q  152 gaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||| | ||||||  ||||||||||||||||||||||||||||||||||    
T  8842348 gaaaatcacataatttggtgtaattatatatgtcggtgtcagacacgacac 8842398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 24633431 - 24633377
Alignment:
Q  162 taattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgg 216  Q
    ||||||| ||||||||||| |||||||||  ||||||||||||||| ||||||||    
T  24633431 taattcaatgtaattatatgtgtcggtgttggacacgacacttgtctaacaccgg 24633377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 29112326 - 29112280
Alignment:
Q  146 atttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  29112326 atttgagaaaatcatataattcagtgtaattatatatgacggcgtca 29112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 40150621 - 40150567
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagaca 196  Q
    |||||||||||||||| |||||||||| |||||| |||| |||||||||| ||||    
T  40150621 aataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtctgaca 40150567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 21419505 - 21419456
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||| ||||||| |||||||||| ||||||||||||||| ||||||    
T  21419505 aataatttaagaaaataatataattcaatgtaattatatatgttggtgtc 21419456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 29508453 - 29508561
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatat------atgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaaa 235  Q
    |||||||||| ||||| ||||||||||||||||||||||      |||| |||||| ||||||||||  |||| ||||||||| | | |||||| || ||    
T  29508453 aataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaa 29508552  T
Q  236 gtgttcgtg 244  Q
    |||| ||||    
T  29508553 gtgtccgtg 29508561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 17005669 - 17005621
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||||| ||||| |||||||||||||||||||||  |||||||||    
T  17005669 aataatttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23657765 - 23657845
Alignment:
Q  159 atataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatcaaaaaagtgt 239  Q
    ||||||||||||||||||||| || |||||||| |||| |||| |||||| | ||||||| |  |||||||  ||||||||    
T  23657765 atataattcagtgtaattataaatatcggtgtcggacatgacatttgtccgataccgggacacacctaatccgaaaagtgt 23657845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 49505204 - 49505148
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||||||||| | |||||| ||||||||||||| |||| ||||| ||||||    
T  49505204 aataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacg 49505148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 4201405 - 4201459
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagaca 196  Q
    |||||||||| ||||| | |||||| ||||||||||||||||| |||||| ||||    
T  4201405 aataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtccgaca 4201459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 6780466 - 6780400
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaac 211  Q
    ||||||||||||| |  || |||||||||||||||| ||| |||||| ||||| |||| ||||||||    
T  6780466 aatttgagaaaatcacgtagttcagtgtaattatatgtgttggtgtcggacacaacacgtgtccaac 6780400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 10690312 - 10690266
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggt 188  Q
    |||||| ||||||||| | |||||||||||||||||||| |||||||    
T  10690312 aataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 15505829 - 15505775
Alignment:
Q  153 aaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    |||||||||||||||||||||||||||  ||| |||||| ||||| |||| ||||    
T  15505829 aaaattatataattcagtgtaattataagtgttggtgtcggacacaacacatgtc 15505775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 16192800 - 16192762
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  16192800 aataatttgagaaaataacataattcagtgtaattatat 16192762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 27097107 - 27097065
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||||||||||| |||||||| | |||||||||||||||    
T  27097107 taatttgagaaaattacataattcaatttaattatatatgtcg 27097065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 27764716 - 27764766
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaa-ttatatatgtcggtgtca 192  Q
    |||||||||||||||||||||||||| ||||| ||||||  ||||||||||    
T  27764716 ataatttgagaaaattatataattcaatgtaatttatatgggtcggtgtca 27764766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 28918010 - 28918099
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc--agacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | ||||||||||||||||| |  ||||||||||   |||||||||| ||||| |||| |||| | ||||||||    
T  28918010 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatc 28918099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 3618890 - 3618948
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacac 202  Q
    |||||||||||||||||  ||||||||| |||||  ||| |||||||||||||||| ||||    
T  3618890 aataatttgagaaaattccataattcagcgtaat--tatgtgtcggtgtcagacacaacac 3618948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 3631712 - 3631765
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacacc 214  Q
    |||||||||||||||||||| || | ||||| |||||||||| ||||| |||||    
T  3631712 ataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacacc 3631765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 9800049 - 9800098
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||||| ||||||| |||||||| ||  ||||||||||    
T  9800049 aataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtc 9800098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 15796344 - 15796295
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| ||||||||||||||||||| |  ||||||||||    
T  15796344 aataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 25652081 - 25652044
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  25652081 aataatttgagaaaatgatataattcagtgtagttata 25652044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 26492255 - 26492190
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    |||||||||| ||||| ||| ||||||||||||||| |  | |||||||| |||||||||| ||||    
T  26492255 aataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacatgtc 26492190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 2941592 - 2941632
Alignment:
Q  167 cagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  2941592 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 2941632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 21211297 - 21211333
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattat 178  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  21211297 aataatttgagaaaattacatagttcagtgtaattat 21211333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 35222956 - 35223012
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    ||||||| | |||||||| ||||||||||| |||||||||| |||| ||||| ||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtc 35223012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 18841063 - 18840987
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||| ||||||| |||||| |||||||||| |  ||||||||||||||||||||| ||||| |||||||||    
T  18841063 aataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccggga 18840987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 5367201 - 5367288
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||||||| |||||||||| | ||| || |||||| | ||||||||    
T  5367201 aataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatc 5367288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 2415326 - 2415399
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccg 215  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||| ||||| ||||||||| | ||||| ||||||    
T  2415326 aataatttgagaaaattatataattaagtgtaactatatgtgttggtgtgagacacgactcatgtccgacaccg 2415399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 40361804 - 40361739
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    |||||||||| ||||||| |||||| ||||||||||||| ||| ||||||||||||||||| ||||    
T  40361804 aataatttgaaaaaattacataatttagtgtaattatatctgttggtgtcagacacgacacgtgtc 40361739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 34691855 - 34691799
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  34691855 aataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 34714267 - 34714211
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacg 198  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  34714267 aataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 2438769 - 2438682
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||| | ||||| | ||||||||||||||||| |  |||||||||| |||||||||| ||||| ||||||||| | ||||||||    
T  2438769 aataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatc 2438682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 30527673 - 30527599
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggt 188  Q
    |||| |||||||| ||||| | |||||||| |||||||||||||| |||||||| ||||||||||||| |||||||    
T  30527673 acactgacactgacacacccacactgttaa-taatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 30404934 - 30404813
Alignment:
Q  107 gacataacacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgt 206  Q
    ||||| |||| |||||||| || |||| || ||||| |||||||| ||||| | ||||||||||||||||| |  |||||| ||| |||||||||| |||    
T  30404934 gacatgacacggacactgacacgccgacacggttaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgt 30404836  T
Q  207 ccaacaccgggataagcctaatc 229  Q
    || ||||| ||| | ||||||||    
T  30404835 ccgacaccaggacatgcctaatc 30404813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 15972882 - 15972958
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||| ||||||| | ||||||||||||||| |  |||||||||| |||||||||| ||||| || ||||||    
T  15972882 aataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccggga 15972958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 23921262 - 23921317
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||||| ||||||||||||||||||| || | |||||| |||||    
T  23921262 aataatttgagaaaattacataattcagtgtaattataaatattggtgtcggacac 23921317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 18276530 - 18276600
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaaca 212  Q
    |||||||||||||||| |  ||||||||||||||||| | ||||||||||||| || |||| ||| |||||    
T  18276530 aataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtcagataccacacgtgttcaaca 18276600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 22084882 - 22084840
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgt 184  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  22084882 aataatttgagaaaatcatataattcagtgtaattttatatgt 22084840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 23718001 - 23718082
Alignment:
Q  107 gacataacacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtg 189  Q
    ||||| |||| |||||||| ||||||| || | ||| |||||||||||| | | |||||||||||||||||||| ||||||||    
T  23718001 gacatgacacggacactgacacaccgacaccgctaa-taatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 24105673 - 24105754
Alignment:
Q  107 gacataacacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtg 189  Q
    ||||| |||| |||||||| ||||||| || | ||| |||||||||||| | | |||||||||||||||||||| ||||||||    
T  24105673 gacatgacacggacactgacacaccgacaccgctaa-taatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 1327987 - 1328061
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||||||||| ||| |||||||| ||||  ||| ||||||||||| ||| ||| ||||||| |||||||||    
T  1327987 aataatttgagaaaatcataaaattcagtataat--tatgtgtcggtgtcaaacatgacgcttgtccgacaccggga 1328061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 42832326 - 42832277
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||||| ||| |||||||||||||||  ||||||||||    
T  42832326 aataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 44860329 - 44860378
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  44860329 aataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtc 44860378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 15909707 - 15909644
Alignment:
Q  116 cagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||| || ||||||| | |||| | ||||||||||||| ||||||||||||||||||||    
T  15909707 cagacactgacacgccgatacagctaaa-attttgagaaaattacataattcagtgtaattatat 15909644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 20242768 - 20242712
Alignment:
Q  151 agaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtc 207  Q
    ||||||| | |||||||||||||||||||| |||||||||| ||||| |||| ||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtc 20242712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 37411294 - 37411218
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||||||||| | |||||||||||| ||||||| ||||| ||||  ||||||| | ||||| |||| ||||    
T  37411294 aataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactggga 37411218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 39279684 - 39279732
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||| ||||||||| | |||||||||||||||||||| |||||||||    
T  39279684 aataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 35056883 - 35056926
Alignment:
Q  148 ttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||  |||||||||||||||||||||| ||||||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtc 35056926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 21616771 - 21616809
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatat 180  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  21616771 aataatttgagaaaatcacataattcagtgtaattatat 21616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 37491927 - 37491850
Alignment:
Q  119 acactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    ||||||| ||| |||||||| |||| | ||||||||||| |  ||||||| |||||||| || ||||||||||||||||    
T  37491927 acactgacacatcgatactgataaa-attttgagaaaataacttaattcaatgtaattaaatgtgtcggtgtcagacac 37491850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 38355933 - 38355887
Alignment:
Q  146 atttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||||||||| | |||||||||||| ||||||| |||||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 38355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 41942117 - 41942155
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatg 183  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  41942117 aatttgagaaaattacataattcagtataattatatatg 41942155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 12668473 - 12668424
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  12668473 aataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtc 12668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 13273064 - 13273019
Alignment:
Q  146 atttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||||||||||| | |||||||| ||||| |||||    
T  13273064 atttgagaaaattatataattcaatctaattataaatgtcagtgtc 13273019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 18889641 - 18889592
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||| |||||||||| | ||||||||||||||| |||| ||||||||||    
T  18889641 aataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 21782896 - 21782832
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattat 178  Q
    ||||| ||||||| || |||| |||| ||| |||||||||||||| | ||||||||||||||||||    
T  21782896 acacaaacactgacacgccgacactgctaa-taatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 24975375 - 24975326
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||||||||  ||||||||||||||| |||||  |||||||||    
T  24975375 aataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtc 24975326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 25544490 - 25544523
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaat 175  Q
    |||||||||||||||| |||||||||||||||||    
T  25544490 aataatttgagaaaatgatataattcagtgtaat 25544523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 31026704 - 31026753
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||| ||||||| | |||||||| |||||| |||||||||||||||    
T  31026704 aataatttaagaaaatgacataattcaatgtaatcatatatgtcggtgtc 31026753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 31456691 - 31456654
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattata 179  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  31456691 aataatttaagaaaattatgtaattcagtgtaattata 31456654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 44605189 - 44605136
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagac 195  Q
    |||||||||||||||| | |||||||| |||||||| || ||||||||| ||||    
T  44605189 aataatttgagaaaataacataattcaatgtaattacatgtgtcggtgttagac 44605136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 6940264 - 6940336
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacacc 214  Q
    |||||||| | ||| ||| |||||| |||||||||| |  ||||||| || |||||||||| |||||||||||    
T  6940264 aataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacgacacgtgtccaacacc 6940336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 12940985 - 12940941
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcg 186  Q
    |||||||||| ||||| ||||||||||||||||||| | ||||||    
T  12940985 aataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 27084317 - 27084365
Alignment:
Q  181 atgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||||| |||||||||| |||||||||||| || | ||||||||    
T  27084317 atgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatc 27084365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 28596497 - 28596549
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||| ||||||||||||||  |||||||||| |||||||||| ||||| ||||    
T  28596497 ataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacac 28596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 70287 - 70374
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    |||||||||| ||||| | |||||||||||||||||||  |||||||||| |||||||||| ||||| ||||| ||| | ||||||||    
T  70287 aataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatc 70374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 213
Target Start/End: Original strand, 1653 - 1724
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacac 213  Q
    |||||||||||||||| ||||||||  || ||||||||  |||||||||| |||||||||| ||||| ||||    
T  1653 aataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacac 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Original strand, 63782 - 63837
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacac 197  Q
    |||||||||||||||||| ||||||||||| ||||| |  ||||||||||||||||    
T  63782 aataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtcagacac 63837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 56932 - 56964
Alignment:
Q  143 ataatttgagaaaattatataattcagtgtaat 175  Q
    ||||||||||||||| |||||||||||||||||    
T  56932 ataatttgagaaaatgatataattcagtgtaat 56964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 135390 - 135313
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    ||||||||||  | ||||||| |||| ||| |||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  135390 acacagacaccaacacaccgacactgctaa-taatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 240071 - 240021
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||||||||||||| |||||||||| |||||| |||| |||||||||||    
T  240071 aataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtca 240021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 9797 - 9748
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||||||||| |  ||||||||||||||||||| ||||||||||    
T  9797 aataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtc 9748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 512 - 436
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccggga 218  Q
    |||||||||| ||||| | | ||||||||||||||| |  |||||||||| |||||||| | ||||| |||||||||    
T  512 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccggga 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 85021 - 84973
Alignment:
Q  144 taatttgagaaaattatataattcagtgtaattatatatgtcggtgtca 192  Q
    |||||| ||||||| ||||||||  ||||||||||||||||||||||||    
T  85021 taatttaagaaaatcatataattatgtgtaattatatatgtcggtgtca 84973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 44572 - 44529
Alignment:
Q  145 aatttgagaaaattatataattcagtgtaattatatatgtcggt 188  Q
    ||||||||||||| | |||||||||||||||||||| |||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 53189 - 53236
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtg 189  Q
    |||||||||||||||| | |||||||||||||||||||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 177
Target Start/End: Original strand, 92816 - 92851
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaatta 177  Q
    |||||||||||||||||| |||||||||||||||||    
T  92816 aataatttgagaaaattacataattcagtgtaatta 92851  T

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Target: scaffold1528 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 1016 - 1092
Alignment:
Q  113 acacagacactgagacaccgatactgttaaataatttgagaaaattatataattcagtgtaattatatatgtcggtgt 190  Q
    |||||||| |||| ||||||| || | ||| |||||||| ||||||| |||||||||||||| ||||| |||| ||||    
T  1016 acacagacgctgacacaccgacaccgctaa-taatttgaaaaaattacataattcagtgtaactatatgtgtcagtgt 1092  T

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Target: scaffold0376 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 6321 - 6370
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||||  |||||||| ||||||||||| ||||||||||    
T  6321 aataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtc 6370  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 46691 - 46740
Alignment:
Q  142 aataatttgagaaaattatataattcagtgtaattatatatgtcggtgtc 191  Q
    |||||||||| ||||| | ||||||||||||||||| | |||||||||||    
T  46691 aataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc 46740  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 45561 - 45493
Alignment:
Q  161 ataattcagtgtaattatatatgtcggtgtcagacacgacacttgtccaacaccgggataagcctaatc 229  Q
    ||||||||||||||||| |  |||||||||| |||||||||| ||||  |||||| || | ||||||||    
T  45561 ataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatc 45493  T

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