View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20029_high_36 (Length: 262)
Name: NF20029_high_36
Description: NF20029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20029_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 32643680 - 32643926
Alignment:
| Q |
1 |
atgaacctgccatcccaattgggggtggattgcccttgactacaaggctcgtgaaaaaggacatctctcttcagatgttcatcttgaaacggtacacggc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
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| T |
32643680 |
atgaacctgccatcccaattgggggtggattgcccttgaccacaaggctcgtgaaaaaggacatctctcttcagatgttcatcttgaaaaggcacacggc |
32643779 |
T |
|
| Q |
101 |
aataaccggcataaaaaatgttctaaataacacatgcactcgaatttttaatgatgttttgcagatagttttgaaaagcaaaattatgattgcaacacga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32643780 |
aataaccggcataaaaaatgttctaaataacacatgcactcgaatttttaatgatgttttgcagatagttttgaaaagcaaaattatgattgcaacacga |
32643879 |
T |
|
| Q |
201 |
ggtaccacatcacgaattcacacactcaatatgcctttggttcttcc |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32643880 |
ggtaccacatcacgaattcacacactcaatatgcctttggttcttcc |
32643926 |
T |
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