View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20029_low_48 (Length: 240)
Name: NF20029_low_48
Description: NF20029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20029_low_48 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 44298953 - 44299173
Alignment:
| Q |
1 |
ccatgaccatgaccaatttgttccggttcctttgtctcagaaccagcttctaaattactagaagaagacgcagaaagtttcttcttaaagaaacttatag |
100 |
Q |
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| T |
44298953 |
ccatgaccatgaccaatttgttccggttcctttgtctcagaaccagcttctaaattactagaagaagacgcagaaagtttcttcttaaagaaacttatag |
44299052 |
T |
|
| Q |
101 |
aaaaagaatcaaccatgagagtaaaaacagcagacaccatagcaataaaagtggtgaatggaaattttttccaaggccgttcaggcaaacaaggagaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44299053 |
aaaaagaatcaaccatgagagtaaaaacagcagacaccatagcaataaaagtggtgaatggaaattttttccaaggccgttcaggcaaacaaggagaatt |
44299152 |
T |
|
| Q |
201 |
tagatcctgaaatgaatctgg |
221 |
Q |
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||||||||||||||||||||| |
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| T |
44299153 |
tagatcctgaaatgaatctgg |
44299173 |
T |
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