View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20035_high_5 (Length: 318)
Name: NF20035_high_5
Description: NF20035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20035_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 61 - 295
Target Start/End: Original strand, 8320023 - 8320257
Alignment:
| Q |
61 |
gtggtggcagtactctttgtaataattcattaatattctctttctctctttttaggtaagggacaaaatatagtatctctcttaagcactccttccatgt |
160 |
Q |
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| T |
8320023 |
gtggtggcagtactctttgtaataattcattaatattctctctctctctttttaggtaagggacaaaatatagtatctctcttaagcactccttccatgt |
8320122 |
T |
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| Q |
161 |
gcaatgtgaatatgtgagatttattgagagagaaagctacaagttcattaaggttgcctttcttttaatccatttatcatcatttccatgattgattgga |
260 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
8320123 |
gcaatgtgaatatgtgagatttattgagagacaaagctacaagttcattaaggttgcctttcttttaatccatttatcatcatttccatgattgattaga |
8320222 |
T |
|
| Q |
261 |
gttaaacctaagttgaactttgtacatattttatt |
295 |
Q |
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|||||||||||| | |||||||||||||||||||| |
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| T |
8320223 |
gttaaacctaagcttaactttgtacatattttatt |
8320257 |
T |
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