View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20035_low_13 (Length: 204)
Name: NF20035_low_13
Description: NF20035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20035_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 6917685 - 6917861
Alignment:
| Q |
10 |
cagaacctgtgtataataaatctttcgtcgctgcaagcgagtaaatatgaccttcttcgcgaactaatgaaccaacaagagcttcttcgctagacgaagc |
109 |
Q |
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| T |
6917685 |
cagaaccggtgtataataaatccttcgtcgctgcaagcgagtaaatatgaccttcttcgcgaactaatgaaccaacaagagcttcttcgctagacgaagc |
6917784 |
T |
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| Q |
110 |
ttcttcattaacatgccatggtgattttgataatggtgaaagagatgcatcataaggtgaattatctgatgccattt |
186 |
Q |
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| T |
6917785 |
ttcttcattaacatgccatggtgattttgataatggtgaaagagatgcatcataaggtgaattatctgatgccattt |
6917861 |
T |
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