View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20037_high_24 (Length: 251)
Name: NF20037_high_24
Description: NF20037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20037_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 40719889 - 40719651
Alignment:
| Q |
1 |
taagggaagaactcgagttcgaatcttagttgaaataatcattgctcacccacttctattatgaattgtaagtgaacatgttagcacccacttctccctt |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
40719889 |
taagagaagaactcgagttcgaatcttagttgaaataatcattggtcacccacttctattatgaattgtaagtgaacatgttagcacccacttctctctt |
40719790 |
T |
|
| Q |
101 |
aactccaccttaaaaggaaaaatctctaggaaaatagtataaccttaactatatgacatgcaagttgggaaacacacttaaagaacattaaaaattacat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
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|
| T |
40719789 |
aactccaccttaaaaggaaaaatctctaggaaaatagtataaccttaactgcatgacatgcaagttgggaaacaaacttaaagaacattaaaaattacat |
40719690 |
T |
|
| Q |
201 |
agtaatctagttaagagtttcgtgtagtattttcttcat |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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|
| T |
40719689 |
agtaatctagttaagagtttcgtgtagtattttcttcat |
40719651 |
T |
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