View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20037_high_29 (Length: 221)
Name: NF20037_high_29
Description: NF20037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20037_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 13972962 - 13973152
Alignment:
| Q |
14 |
ataatactccacaacagaaaacatcacacagtatcatcacacaccattatacatcaaannnnnnnctccacattcatacaaaattataatataacacttc |
113 |
Q |
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| T |
13972962 |
ataatacttcacaacagaaaacatcacacagtatcatcacacaccattatacatcaaatttttttctccacattcatacaaaattataatataacacttc |
13973061 |
T |
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| Q |
114 |
cttcacatgatcaactttacagaattccatgtgatggatttcaccttccattaagattactaaactgtgcaaacattgcagttccagaatg |
204 |
Q |
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| T |
13973062 |
cttcacatgatcaactttacagaattccatgtgatggatttcaccttccattaagattactaaactgtgcaaacattgcagttccagaatg |
13973152 |
T |
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Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 39849776 - 39849824
Alignment:
| Q |
156 |
accttccattaagattactaaactgtgcaaacattgcagttccagaatg |
204 |
Q |
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| T |
39849776 |
accttccattaaaattacccaaatgtgcaaacattgcagatccagaatg |
39849824 |
T |
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