View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20037_low_30 (Length: 225)

Name: NF20037_low_30
Description: NF20037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20037_low_30
NF20037_low_30
[»] chr1 (5 HSPs)
chr1 (50-218)||(26990997-26991165)
chr1 (74-148)||(47445778-47445852)
chr1 (74-148)||(36475974-36476048)
chr1 (98-151)||(24646464-24646517)
chr1 (74-143)||(47445051-47445120)
[»] chr5 (8 HSPs)
chr5 (51-142)||(33136569-33136659)
chr5 (74-148)||(31808335-31808409)
chr5 (74-148)||(36429340-36429414)
chr5 (51-151)||(21012392-21012490)
chr5 (74-148)||(5347781-5347856)
chr5 (74-148)||(5348509-5348583)
chr5 (81-134)||(27597423-27597476)
chr5 (80-124)||(36681860-36681904)
[»] chr3 (10 HSPs)
chr3 (74-148)||(50838262-50838336)
chr3 (74-124)||(35942780-35942830)
chr3 (79-148)||(1576544-1576613)
chr3 (55-151)||(50381908-50382002)
chr3 (74-148)||(1577514-1577587)
chr3 (51-125)||(31799551-31799623)
chr3 (74-148)||(43546424-43546498)
chr3 (74-148)||(47471479-47471553)
chr3 (74-148)||(54560820-54560894)
chr3 (74-127)||(50837538-50837591)
[»] chr4 (5 HSPs)
chr4 (74-148)||(11147803-11147877)
chr4 (74-148)||(620528-620602)
chr4 (74-148)||(621539-621613)
chr4 (74-124)||(11148100-11148149)
chr4 (79-127)||(27455722-27455770)
[»] scaffold0020 (1 HSPs)
scaffold0020 (51-127)||(2026-2101)
[»] chr7 (5 HSPs)
chr7 (55-127)||(32390005-32390075)
chr7 (55-151)||(32390876-32390970)
chr7 (79-127)||(36068115-36068163)
chr7 (60-151)||(25634968-25635055)
chr7 (55-127)||(24240645-24240716)
[»] scaffold0102 (1 HSPs)
scaffold0102 (74-148)||(33147-33222)
[»] chr6 (5 HSPs)
chr6 (74-148)||(6009431-6009505)
chr6 (74-148)||(17732819-17732893)
chr6 (74-148)||(15347490-15347565)
chr6 (74-148)||(6008699-6008773)
chr6 (74-127)||(17732094-17732147)
[»] scaffold0380 (1 HSPs)
scaffold0380 (51-123)||(7521-7591)
[»] chr8 (3 HSPs)
chr8 (74-148)||(14790730-14790805)
chr8 (74-148)||(14791457-14791531)
chr8 (74-148)||(20112280-20112353)


Alignment Details
Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 26990997 - 26991165
Alignment:
Q  50 gtaactgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaat 149  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  26990997 gtaactgccacgtcatagggtgtaa-caaccaaaacaagttgaggggagtaattgattaacgtttgacaattttagggaagtttttgaagtttcttaaat 26991095  T
Q  150 gtagg-gnnnnnnnnnnacgaaagttacaatttcaggttttgtttgcctatttactcgttatattcttcg 218  Q
    || || |          ||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  26991096 gtcggagttttttttttacgaaagttacaatttcaggttttgtttgcctattcactcgttatattgttcg 26991165  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 47445778 - 47445852
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    ||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||   |||| |||||||||||||    
T  47445778 aacaaccaaaacaaatggaggggggtaattgactaacgtttgataatttcaggggtttttttgaagtttcttaaa 47445852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 36475974 - 36476048
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||||||||||| |||||||| |||| ||| ||||||||| ||  ||||| |||||||||||||    
T  36475974 aacagccaaaacaaatggaggggggtaattgactaacgtttaacaatttcatgggggtttttgaagtttcttaaa 36476048  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 24646464 - 24646517
Alignment:
Q  98 gtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaatgt 151  Q
    ||||||||||||| ||||||||||||| |   ||||| ||||||||||||||||    
T  24646464 gtaattgattaacgtttgacaatttcatgagggtttttgaagtttcttaaatgt 24646517  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 47445120 - 47445051
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttc 143  Q
    |||| |||||| ||| ||||||| |||||||| |||| ||||||||||||| ||  ||||| ||||||||    
T  47445120 aacagccaaaataaacggaggggggtaattgactaacgtttgacaatttcatgggggtttttgaagtttc 47445051  T

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Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 33136569 - 33136659
Alignment:
Q  51 taactgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagttt 142  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||| |||||||| |||| ||| |||||||||||| |||||| |||||||    
T  33136569 taactgccacgtcatagagtgtaa-cagccaaaacagatggaggggggtaattgactaacgtttaacaatttcaggggagtttttgaagttt 33136659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 31808409 - 31808335
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| ||||||||||  |||||| |||||||| |||| ||| |||||||||||  |||||| |||||||||||||    
T  31808409 aacagccaaaacaaactgaggggggtaattgactaacgtttaacaatttcaggagagtttttgaagtttcttaaa 31808335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 36429414 - 36429340
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| | || ||||| ||||||||||  ||||| |||||||||||||    
T  36429414 aacagccaaaacaaacggaggggggtaattgactgacgtttgataatttcaggggcgtttttgaagtttcttaaa 36429340  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 21012392 - 21012490
Alignment:
Q  51 taactgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaatg 150  Q
    |||||||||| ||||| |||||||  | ||||||||||  |||||| ||||||||||||| ||||||||||||| |   | ||| |||||||||||||||    
T  21012392 taactgccacatcatatggtgtaat-agccaaaacaaacagagggg-gtaattgattaacgtttgacaatttcaagtggggttttgaagtttcttaaatg 21012489  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 5347856 - 5347781
Alignment:
Q  74 aacaaccaaaacaaatgga-ggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||| |||| |||||||| |||| ||||| ||||||||||  ||||| |||||||||||||    
T  5347856 aacagccaaaacaaacggaaggggggtaattgactaacgtttgataatttcaggggggtttttgaagtttcttaaa 5347781  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 5348509 - 5348583
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||   |||| |||||||| ||||    
T  5348509 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcagggggttttttgaagtttcctaaa 5348583  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 27597423 - 27597476
Alignment:
Q  81 aaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagtttt 134  Q
    |||||||| |||||||||||||||| || | |||||||||||||| ||| ||||    
T  27597423 aaaacaaacggaggggagtaattgactagcatttgacaatttcagagaattttt 27597476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 36681860 - 36681904
Alignment:
Q  80 caaaacaaatggaggggagtaattgattaacttttgacaatttca 124  Q
    ||||||||| ||||||| |||||||| |||| |||||||||||||    
T  36681860 caaaacaaacggaggggggtaattgactaacgtttgacaatttca 36681904  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 50838262 - 50838336
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| ||||| |||||||||| |||||| |||||||||||||    
T  50838262 aacagccaaaacaaacggaggggggtaattgactaacgtttgataatttcaggggagtttttgaagtttcttaaa 50838336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 35942780 - 35942830
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttca 124  Q
    ||||||||||||||||||||||| |||||||| |||| ||| |||||||||    
T  35942780 aacaaccaaaacaaatggaggggggtaattgactaacgtttaacaatttca 35942830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 1576613 - 1576544
Alignment:
Q  79 ccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||||||||| ||||||| |||||||| |||| |||| |||||||||||  ||||| |||||||| ||||    
T  1576613 ccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcaggggggtttttgaagtttcctaaa 1576544  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 50382002 - 50381908
Alignment:
Q  55 tgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaatgt 151  Q
    |||||||||||| ||| ||| || ||||||||||  |||||| |||||||| |||| |||||||||||||| |  | ||| ||||||||||||||||    
T  50382002 tgccacgtcatatggtttaa-cagccaaaacaaacagaggggggtaattgactaacgtttgacaatttcagaggggattt-gaagtttcttaaatgt 50381908  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 1577514 - 1577587
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||  ||||| |||||||| ||||    
T  1577514 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcaggg-ggtttttgaagtttcctaaa 1577587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 31799623 - 31799551
Alignment:
Q  51 taactgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcag 125  Q
    ||||||||| |||||||||| ||| ||  ||||||||| ||||||| |||||||| |||| ||||||||||||||    
T  31799623 taactgccatgtcatagggtttaa-cagtcaaaacaaacggagggg-gtaattgactaacatttgacaatttcag 31799551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 43546498 - 43546424
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| | || ||||| |||||||| |  ||||| |||||||||||||    
T  43546498 aacagccaaaacaaacggaggggggtaattgactgacgtttgataatttcagaggggtttttgaagtttcttaaa 43546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 47471479 - 47471553
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| ||||||||||  |||||| |||||||| |||| |||| |||||||||||  ||||| |||||||| ||||    
T  47471479 aacagccaaaacaaacagaggggggtaattgactaacgtttggcaatttcaggggggtttttgaagtttcctaaa 47471553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 54560820 - 54560894
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||   |||| |||||||| ||||    
T  54560820 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcagggggttttttgaagtttcctaaa 54560894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 50837591 - 50837538
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcaggg 127  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||    
T  50837591 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcaggg 50837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 11147877 - 11147803
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| ||||||||||||| || | |||| |||||||||||||    
T  11147877 aacagccaaaacaaacggaggggggtaattgactaacgtttgacaatttcaagggaatttttgaagtttcttaaa 11147803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 620602 - 620528
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||  ||||| |||||||| ||||    
T  620602 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcaggggggtttttgaagtttcctaaa 620528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 621539 - 621613
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||  ||||| |||||||| ||||    
T  621539 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcaggggggtttttgaagtttcctaaa 621613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 11148100 - 11148149
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttca 124  Q
    ||||||||||||||| ||||||| |||||||| |||| |||||||||||||    
T  11148100 aacaaccaaaacaaacggagggg-gtaattgactaacatttgacaatttca 11148149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 27455722 - 27455770
Alignment:
Q  79 ccaaaacaaatggaggggagtaattgattaacttttgacaatttcaggg 127  Q
    |||||||||| ||||||| |||||||| |||| |||| |||||||||||    
T  27455722 ccaaaacaaacggaggggggtaattgactaacatttggcaatttcaggg 27455770  T

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Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 2101 - 2026
Alignment:
Q  51 taactgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcaggg 127  Q
    |||||||||||||| ||||||||| || |||||||| | ||||||| |||||||| |||| ||| ||||||||||||    
T  2101 taactgccacgtcacagggtgtaa-cagccaaaacagacggaggggggtaattgactaacgtttaacaatttcaggg 2026  T

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Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 32390075 - 32390005
Alignment:
Q  55 tgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcaggg 127  Q
    |||||||||||| ||| ||| ||||||||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  32390075 tgccacgtcatatggtttaa-caaccaaaataaatggagggga-taattgactaacgtttgacaatttcaggg 32390005  T

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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 32390876 - 32390970
Alignment:
Q  55 tgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaatgt 151  Q
    |||||||||||| ||| ||| ||  ||||||||| ||||||| |||||||| |||| ||||| |||||||||| | ||||| |||||||||||||||    
T  32390876 tgccacgtcatatggtttaa-cagtcaaaacaaacggaggggggtaattgactaacgtttgataatttcaggggatttttg-aagtttcttaaatgt 32390970  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 36068115 - 36068163
Alignment:
Q  79 ccaaaacaaatggaggggagtaattgattaacttttgacaatttcaggg 127  Q
    |||||||||| ||||||| |||||||| |||| ||||||||||||||||    
T  36068115 ccaaaacaaacggaggggggtaattgactaacatttgacaatttcaggg 36068163  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 25634968 - 25635055
Alignment:
Q  60 cgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttca--gggaagttttggaagtttcttaaatgt 151  Q
    ||||||||||| ||| |||||||||||| ||||||||  |||| ||||||| |||||||||||||  ||||   ||| ||||||||||||||||    
T  25634968 cgtcatagggtataa-caaccaaaacaagtggagggg--taatcgattaacgtttgacaatttcaaaggga---ttttgaagtttcttaaatgt 25635055  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 24240716 - 24240645
Alignment:
Q  55 tgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcaggg 127  Q
    |||||||||| ||||||||| || |||||||| |  |||||| |||||||| |||| ||| ||||||||||||    
T  24240716 tgccacgtcacagggtgtaa-cagccaaaacagacagaggggggtaattgactaacatttaacaatttcaggg 24240645  T

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Target: scaffold0102 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 33147 - 33222
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaag-ttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| ||||||||||||||||  | ||||||||||||| ||||    
T  33147 aacagccaaaacaaacggaggggggtaattgactaacgtttgacaatttcaggggggtttttggaagtttcctaaa 33222  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 6009431 - 6009505
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| |||| ||  ||||||| |||| ||||| |||||||||| |||||| |||||||||||||    
T  6009431 aacagccaaaacaaacggagagggataattgactaacgtttgataatttcaggggagtttttgaagtttcttaaa 6009505  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 17732819 - 17732893
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||  |||| ||||| ||||||||||  ||||| |||||||||||||    
T  17732819 aacagccaaaacaaacggaggggggtaattggctaacgtttgataatttcaggggggtttttgaagtttcttaaa 17732893  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 15347565 - 15347490
Alignment:
Q  74 aacaaccaaaacaaatgga-ggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||| |||| |||||||| |||| ||||| ||||||||||  ||||| |||||||||||||    
T  15347565 aacagccaaaacaaacggaaggggggtaattgactaacgtttgataatttcaggggggtttttgaagtttcttaaa 15347490  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 6008773 - 6008699
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||||||||||| || ||||| |||| |||| |||||||||||   |||| |||||||| ||||    
T  6008773 aacagccaaaacaaatggaggggggtgattgactaacgtttgtcaatttcagggggctttttgaagtttcctaaa 6008699  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 17732147 - 17732094
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcaggg 127  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||    
T  17732147 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcaggg 17732094  T

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Target: scaffold0380 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 7521 - 7591
Alignment:
Q  51 taactgccacgtcatagggtgtaaacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttc 123  Q
    ||||||||| ||||||||| || |||||| |||||||| ||||||| |||||| |||||| ||||||||||||    
T  7521 taactgccaagtcataggg-gttaacaacaaaaacaaacggagggg-gtaattaattaacatttgacaatttc 7591  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 14790805 - 14790730
Alignment:
Q  74 aacaaccaaaacaaatgga-ggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||| |||| |||||||| |||| ||||| ||||||||||  ||||| |||||||||||||    
T  14790805 aacagccaaaacaaacggaaggggggtaattgactaacgtttgataatttcaggggggtttttgaagtttcttaaa 14790730  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 14791457 - 14791531
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| |||| |||||||||||   |||| |||||||| ||||    
T  14791457 aacagccaaaacaaacggaggggggtaattgactaacgtttgtcaatttcagggggttttttgaagtttcctaaa 14791531  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 20112280 - 20112353
Alignment:
Q  74 aacaaccaaaacaaatggaggggagtaattgattaacttttgacaatttcagggaagttttggaagtttcttaaa 148  Q
    |||| |||||||||| ||||||| |||||||| |||| ||||| |||||||| |  ||||| |||||||||||||    
T  20112280 aacagccaaaacaaacggagggg-gtaattgactaacgtttgataatttcagtggggtttttgaagtttcttaaa 20112353  T

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