View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20038_low_1 (Length: 576)

Name: NF20038_low_1
Description: NF20038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20038_low_1
NF20038_low_1
[»] chr3 (107 HSPs)
chr3 (1-261)||(52032809-52033061)
chr3 (400-535)||(21288813-21288948)
chr3 (400-535)||(27647751-27647886)
chr3 (400-535)||(788473-788608)
chr3 (400-534)||(3082178-3082312)
chr3 (396-529)||(19547765-19547899)
chr3 (400-535)||(25592012-25592149)
chr3 (271-380)||(52031654-52031763)
chr3 (401-535)||(53516583-53516717)
chr3 (421-533)||(3136535-3136647)
chr3 (403-535)||(29628986-29629118)
chr3 (402-532)||(52082045-52082175)
chr3 (408-535)||(7672071-7672198)
chr3 (400-529)||(4663146-4663275)
chr3 (422-535)||(43714024-43714137)
chr3 (431-534)||(45518900-45519003)
chr3 (454-535)||(32717923-32718004)
chr3 (400-535)||(29806280-29806415)
chr3 (400-535)||(1129129-1129265)
chr3 (404-535)||(52776453-52776584)
chr3 (107-265)||(26536389-26536539)
chr3 (396-527)||(54262540-54262671)
chr3 (398-444)||(11140607-11140653)
chr3 (398-531)||(19914309-19914442)
chr3 (406-522)||(8324672-8324788)
chr3 (399-534)||(35375510-35375646)
chr3 (401-444)||(42067941-42067984)
chr3 (103-225)||(26104478-26104596)
chr3 (398-444)||(29786531-29786577)
chr3 (397-535)||(52457945-52458083)
chr3 (397-522)||(8433710-8433835)
chr3 (406-535)||(19608562-19608691)
chr3 (399-535)||(44379413-44379550)
chr3 (400-500)||(9252159-9252259)
chr3 (400-535)||(38785082-38785218)
chr3 (406-534)||(52178959-52179087)
chr3 (400-535)||(8966202-8966337)
chr3 (406-521)||(40284196-40284311)
chr3 (398-516)||(43903363-43903481)
chr3 (400-531)||(52024438-52024569)
chr3 (398-516)||(4817074-4817192)
chr3 (398-444)||(37492258-37492304)
chr3 (400-534)||(45602024-45602158)
chr3 (430-535)||(23796048-23796153)
chr3 (427-535)||(39252917-39253026)
chr3 (400-516)||(40478048-40478164)
chr3 (413-522)||(41574749-41574858)
chr3 (406-535)||(41902220-41902349)
chr3 (400-516)||(42478974-42479091)
chr3 (400-535)||(881995-882131)
chr3 (400-535)||(26409630-26409765)
chr3 (396-444)||(29347307-29347355)
chr3 (474-534)||(37627010-37627070)
chr3 (399-443)||(39629947-39629991)
chr3 (396-535)||(42621844-42621984)
chr3 (400-444)||(44365971-44366015)
chr3 (406-522)||(54911032-54911148)
chr3 (398-516)||(32121897-32122015)
chr3 (400-534)||(37520702-37520837)
chr3 (402-516)||(47746118-47746233)
chr3 (400-470)||(48795439-48795510)
chr3 (400-534)||(5528966-5529100)
chr3 (403-516)||(7862734-7862848)
chr3 (403-516)||(23456747-23456861)
chr3 (399-516)||(35501079-35501197)
chr3 (194-265)||(29019937-29020004)
chr3 (400-516)||(29698322-29698438)
chr3 (406-535)||(32621610-32621739)
chr3 (400-516)||(36220695-36220812)
chr3 (399-535)||(49950923-49951060)
chr3 (400-516)||(51344662-51344778)
chr3 (400-444)||(876222-876266)
chr3 (400-535)||(26456954-26457089)
chr3 (400-444)||(42363928-42363972)
chr3 (472-532)||(46868559-46868619)
chr3 (426-522)||(46948647-46948743)
chr3 (400-535)||(52782159-52782295)
chr3 (399-451)||(53289229-53289281)
chr3 (484-535)||(7157123-7157174)
chr3 (400-451)||(35137795-35137846)
chr3 (484-535)||(35352275-35352326)
chr3 (484-535)||(53186275-53186326)
chr3 (476-535)||(55418050-55418109)
chr3 (461-535)||(7347361-7347435)
chr3 (423-521)||(11510741-11510837)
chr3 (40-78)||(21795457-21795495)
chr3 (399-468)||(29815466-29815536)
chr3 (36-78)||(33440722-33440764)
chr3 (400-522)||(35748922-35749044)
chr3 (402-535)||(41982255-41982389)
chr3 (399-516)||(44653461-44653578)
chr3 (401-443)||(44670260-44670302)
chr3 (397-446)||(52058511-52058561)
chr3 (400-516)||(26884973-26885090)
chr3 (434-535)||(27102629-27102729)
chr3 (476-521)||(34593937-34593982)
chr3 (475-516)||(39678396-39678437)
chr3 (476-521)||(46936951-46936996)
chr3 (36-77)||(47042665-47042706)
chr3 (494-535)||(48388854-48388895)
chr3 (474-535)||(48990565-48990626)
chr3 (494-535)||(50560456-50560497)
chr3 (107-152)||(53461730-53461775)
chr3 (37-90)||(53461796-53461849)
chr3 (494-535)||(55365469-55365510)
chr3 (405-516)||(8353067-8353178)
chr3 (400-444)||(46959914-46959958)
[»] chr6 (52 HSPs)
chr6 (401-534)||(15383204-15383337)
chr6 (395-535)||(6264938-6265078)
chr6 (404-535)||(8376024-8376155)
chr6 (401-535)||(17010633-17010767)
chr6 (422-535)||(30020379-30020492)
chr6 (399-535)||(20469035-20469171)
chr6 (398-488)||(34195877-34195967)
chr6 (36-225)||(24209239-24209425)
chr6 (123-249)||(33105976-33106094)
chr6 (404-535)||(7344325-7344456)
chr6 (400-535)||(21970578-21970713)
chr6 (399-535)||(10887808-10887944)
chr6 (400-531)||(29023619-29023750)
chr6 (400-531)||(31644410-31644541)
chr6 (406-522)||(10091771-10091887)
chr6 (397-516)||(19473962-19474081)
chr6 (399-516)||(1705896-1706013)
chr6 (400-444)||(2259266-2259310)
chr6 (107-228)||(3860946-3861063)
chr6 (400-516)||(4509720-4509835)
chr6 (400-444)||(6848876-6848920)
chr6 (55-160)||(2603870-2603974)
chr6 (37-228)||(24585077-24585262)
chr6 (400-457)||(10965972-10966030)
chr6 (409-535)||(33610710-33610836)
chr6 (406-535)||(2198053-2198182)
chr6 (400-516)||(18772149-18772266)
chr6 (406-535)||(32715874-32716003)
chr6 (396-535)||(16893170-16893308)
chr6 (400-515)||(33574643-33574759)
chr6 (400-515)||(33574821-33574937)
chr6 (398-516)||(14507911-14508029)
chr6 (399-444)||(8401413-8401458)
chr6 (402-534)||(18667689-18667824)
chr6 (400-516)||(24249096-24249212)
chr6 (446-535)||(32430227-32430316)
chr6 (36-76)||(3861095-3861135)
chr6 (400-444)||(17545965-17546009)
chr6 (400-444)||(32833774-32833818)
chr6 (400-451)||(23416852-23416903)
chr6 (400-522)||(4979100-4979221)
chr6 (401-531)||(6093926-6094056)
chr6 (402-535)||(9687046-9687180)
chr6 (36-78)||(15494246-15494288)
chr6 (404-529)||(1096493-1096618)
chr6 (400-516)||(21294080-21294196)
chr6 (436-521)||(26315735-26315819)
chr6 (397-516)||(1371686-1371805)
chr6 (397-516)||(1379434-1379553)
chr6 (401-469)||(11763174-11763242)
chr6 (400-452)||(23069054-23069106)
chr6 (475-535)||(26958661-26958721)
[»] chr1 (126 HSPs)
chr1 (396-535)||(26010938-26011077)
chr1 (401-535)||(51977859-51977993)
chr1 (399-535)||(33909961-33910097)
chr1 (396-535)||(35910434-35910573)
chr1 (397-535)||(632645-632783)
chr1 (401-535)||(33098706-33098840)
chr1 (413-535)||(42316848-42316970)
chr1 (404-531)||(10178876-10179003)
chr1 (400-535)||(50239277-50239412)
chr1 (46-228)||(40777901-40778079)
chr1 (36-249)||(3167301-3167506)
chr1 (402-532)||(2247319-2247449)
chr1 (437-534)||(36274754-36274851)
chr1 (427-532)||(48616474-48616581)
chr1 (423-534)||(28791390-28791501)
chr1 (413-535)||(23304679-23304800)
chr1 (400-535)||(2620945-2621085)
chr1 (399-534)||(7122227-7122362)
chr1 (438-535)||(52261084-52261181)
chr1 (38-276)||(4941612-4941843)
chr1 (101-249)||(46149931-46150072)
chr1 (397-534)||(12178871-12179008)
chr1 (41-262)||(13269270-13269483)
chr1 (400-512)||(51184333-51184445)
chr1 (36-265)||(21485886-21486108)
chr1 (434-535)||(27353117-27353218)
chr1 (389-532)||(11778629-11778768)
chr1 (404-535)||(26423845-26423976)
chr1 (406-535)||(11444277-11444406)
chr1 (402-531)||(30547885-30548014)
chr1 (400-522)||(24511863-24511985)
chr1 (399-521)||(43146708-43146828)
chr1 (36-228)||(8221698-8221883)
chr1 (406-535)||(26921682-26921811)
chr1 (400-535)||(9587914-9588050)
chr1 (400-444)||(23061364-23061408)
chr1 (400-535)||(51004790-51004926)
chr1 (400-531)||(34100713-34100844)
chr1 (397-444)||(37499104-37499151)
chr1 (401-535)||(41550148-41550283)
chr1 (423-517)||(41541501-41541595)
chr1 (413-535)||(42647667-42647789)
chr1 (409-535)||(48796300-48796426)
chr1 (422-532)||(2665467-2665579)
chr1 (426-535)||(12979853-12979962)
chr1 (413-534)||(18992622-18992743)
chr1 (402-514)||(34038163-34038276)
chr1 (400-516)||(43916346-43916462)
chr1 (400-535)||(20280492-20280628)
chr1 (400-440)||(23057067-23057107)
chr1 (36-88)||(51879047-51879099)
chr1 (473-520)||(20487642-20487689)
chr1 (409-535)||(28494041-28494167)
chr1 (398-535)||(51369587-51369726)
chr1 (395-516)||(12105155-12105277)
chr1 (404-532)||(44979147-44979276)
chr1 (399-516)||(46641806-46641924)
chr1 (423-501)||(47718868-47718946)
chr1 (485-535)||(47718962-47719012)
chr1 (400-516)||(40054878-40054994)
chr1 (406-535)||(45427133-45427261)
chr1 (400-444)||(921842-921886)
chr1 (400-444)||(5956526-5956570)
chr1 (400-444)||(6519987-6520030)
chr1 (101-226)||(23288601-23288722)
chr1 (399-535)||(32144668-32144804)
chr1 (396-535)||(32912207-32912345)
chr1 (400-444)||(35305514-35305558)
chr1 (400-444)||(51985297-51985341)
chr1 (472-535)||(2090099-2090161)
chr1 (401-444)||(8461528-8461571)
chr1 (461-532)||(28094840-28094911)
chr1 (398-516)||(30320888-30321007)
chr1 (484-535)||(31571056-31571107)
chr1 (402-535)||(9222856-9222990)
chr1 (461-535)||(33234116-33234190)
chr1 (461-535)||(33771708-33771782)
chr1 (406-528)||(39627834-39627956)
chr1 (473-535)||(48752121-48752183)
chr1 (400-521)||(49982456-49982577)
chr1 (400-516)||(1845073-1845189)
chr1 (425-522)||(6079618-6079715)
chr1 (399-535)||(7426659-7426796)
chr1 (400-516)||(24230569-24230686)
chr1 (431-535)||(29171436-29171541)
chr1 (396-516)||(31821567-31821688)
chr1 (406-535)||(36672200-36672329)
chr1 (400-521)||(42958841-42958962)
chr1 (438-534)||(9176736-9176832)
chr1 (400-535)||(23539942-23540077)
chr1 (108-160)||(24646945-24646997)
chr1 (400-535)||(38261074-38261209)
chr1 (474-534)||(44647320-44647380)
chr1 (397-516)||(45650298-45650417)
chr1 (398-514)||(14152685-14152803)
chr1 (400-531)||(25081758-25081889)
chr1 (461-532)||(29451076-29451147)
chr1 (484-535)||(31890156-31890207)
chr1 (400-534)||(44263928-44264063)
chr1 (432-535)||(46918655-46918756)
chr1 (399-531)||(51610535-51610669)
chr1 (402-516)||(52180522-52180637)
chr1 (400-453)||(7435866-7435920)
chr1 (404-529)||(18642145-18642271)
chr1 (461-535)||(22821519-22821593)
chr1 (398-444)||(25702433-25702479)
chr1 (399-516)||(31530306-31530424)
chr1 (399-516)||(44808695-44808812)
chr1 (429-535)||(51991803-51991908)
chr1 (399-452)||(10408649-10408702)
chr1 (400-516)||(35873936-35874053)
chr1 (474-535)||(37765328-37765389)
chr1 (403-535)||(42275338-42275471)
chr1 (107-152)||(45885890-45885935)
chr1 (404-516)||(47693491-47693601)
chr1 (431-535)||(49739401-49739506)
chr1 (475-535)||(6329324-6329384)
chr1 (432-535)||(9259848-9259952)
chr1 (423-535)||(17525708-17525820)
chr1 (406-482)||(31216477-31216553)
chr1 (476-532)||(38862436-38862492)
chr1 (404-444)||(39971273-39971313)
chr1 (400-535)||(40850292-40850428)
chr1 (400-535)||(48976875-48977011)
chr1 (400-535)||(50631593-50631728)
chr1 (400-444)||(52345599-52345643)
[»] chr7 (75 HSPs)
chr7 (400-535)||(43750346-43750481)
chr7 (406-535)||(20438822-20438951)
chr7 (400-535)||(18990359-18990494)
chr7 (400-535)||(34118741-34118876)
chr7 (400-535)||(30936094-30936229)
chr7 (400-535)||(45857475-45857610)
chr7 (400-529)||(30317465-30317595)
chr7 (401-535)||(46836584-46836718)
chr7 (399-535)||(8770369-8770505)
chr7 (398-534)||(44963821-44963957)
chr7 (36-249)||(7738804-7739010)
chr7 (423-535)||(11486266-11486378)
chr7 (400-535)||(42975166-42975301)
chr7 (403-514)||(48946361-48946472)
chr7 (402-535)||(31482643-31482777)
chr7 (428-534)||(41809471-41809577)
chr7 (104-226)||(2746727-2746845)
chr7 (406-535)||(24203138-24203267)
chr7 (107-265)||(35759123-35759276)
chr7 (400-498)||(43069416-43069514)
chr7 (400-535)||(31743573-31743708)
chr7 (400-531)||(43631055-43631186)
chr7 (101-249)||(24504381-24504521)
chr7 (406-535)||(37118340-37118469)
chr7 (404-535)||(1343292-1343423)
chr7 (411-535)||(15877345-15877469)
chr7 (484-535)||(43069348-43069399)
chr7 (397-535)||(2291051-2291189)
chr7 (423-521)||(13806646-13806743)
chr7 (398-444)||(27956647-27956693)
chr7 (400-516)||(21919688-21919804)
chr7 (400-516)||(23182390-23182506)
chr7 (399-444)||(42711291-42711336)
chr7 (400-444)||(41913096-41913140)
chr7 (406-534)||(45704507-45704635)
chr7 (395-516)||(5215315-5215436)
chr7 (429-531)||(16086975-16087077)
chr7 (433-535)||(23561376-23561478)
chr7 (424-522)||(30819733-30819831)
chr7 (396-516)||(35291322-35291443)
chr7 (406-535)||(39925801-39925930)
chr7 (400-440)||(28327433-28327473)
chr7 (397-516)||(48460248-48460367)
chr7 (474-532)||(1583903-1583961)
chr7 (399-516)||(7574550-7574668)
chr7 (424-522)||(24189075-24189173)
chr7 (402-444)||(45461689-45461731)
chr7 (402-451)||(15716261-15716310)
chr7 (406-535)||(20883895-20884024)
chr7 (400-516)||(29688924-29689041)
chr7 (476-533)||(40856614-40856671)
chr7 (423-535)||(46879893-46880006)
chr7 (406-535)||(48900518-48900647)
chr7 (396-535)||(23406648-23406788)
chr7 (399-451)||(28264749-28264801)
chr7 (406-522)||(29273266-29273382)
chr7 (476-535)||(9682103-9682162)
chr7 (484-535)||(15090939-15090990)
chr7 (400-516)||(3214810-3214932)
chr7 (402-535)||(7574116-7574250)
chr7 (401-534)||(25867177-25867311)
chr7 (400-522)||(29982057-29982179)
chr7 (406-492)||(37001005-37001091)
chr7 (400-521)||(42584047-42584168)
chr7 (397-522)||(968496-968621)
chr7 (400-469)||(15954598-15954667)
chr7 (406-535)||(19503126-19503255)
chr7 (400-469)||(26605056-26605125)
chr7 (476-533)||(27800104-27800161)
chr7 (401-457)||(32823455-32823512)
chr7 (403-535)||(42902389-42902522)
chr7 (400-444)||(21699292-21699336)
chr7 (400-444)||(40942238-40942282)
chr7 (403-443)||(41381846-41381886)
chr7 (431-535)||(47068993-47069097)
[»] chr4 (106 HSPs)
chr4 (400-535)||(53695386-53695521)
chr4 (400-562)||(46215772-46215934)
chr4 (398-535)||(56361313-56361451)
chr4 (400-535)||(47302667-47302802)
chr4 (401-535)||(9858520-9858654)
chr4 (400-535)||(31681457-31681592)
chr4 (402-535)||(31908713-31908846)
chr4 (397-534)||(39161798-39161935)
chr4 (396-535)||(36091329-36091468)
chr4 (36-224)||(27572450-27572635)
chr4 (37-263)||(30563537-30563756)
chr4 (413-532)||(30891170-30891289)
chr4 (36-228)||(22851244-22851433)
chr4 (400-498)||(46004356-46004453)
chr4 (403-500)||(51282241-51282338)
chr4 (472-535)||(29646890-29646953)
chr4 (101-265)||(9363238-9363389)
chr4 (399-535)||(32570640-32570775)
chr4 (402-535)||(43958996-43959129)
chr4 (397-522)||(46663610-46663735)
chr4 (36-248)||(36193330-36193534)
chr4 (400-531)||(30060530-30060661)
chr4 (409-535)||(22413831-22413957)
chr4 (406-535)||(34936561-34936690)
chr4 (403-531)||(408338-408466)
chr4 (400-444)||(11109596-11109640)
chr4 (404-535)||(25607694-25607824)
chr4 (400-535)||(34584182-34584317)
chr4 (406-534)||(55060258-55060386)
chr4 (405-531)||(33491606-33491732)
chr4 (395-516)||(49286683-49286804)
chr4 (400-516)||(19527014-19527130)
chr4 (399-444)||(28038047-28038092)
chr4 (395-444)||(55722839-55722888)
chr4 (406-535)||(56272849-56272978)
chr4 (398-457)||(595294-595354)
chr4 (404-535)||(9579668-9579799)
chr4 (404-535)||(9585363-9585494)
chr4 (400-444)||(48578907-48578951)
chr4 (404-535)||(52940752-52940883)
chr4 (172-249)||(25505298-25505372)
chr4 (396-535)||(42881036-42881175)
chr4 (472-535)||(46564785-46564848)
chr4 (395-516)||(1857093-1857215)
chr4 (472-534)||(49144019-49144081)
chr4 (400-522)||(50189297-50189419)
chr4 (406-532)||(54851295-54851421)
chr4 (399-535)||(16004532-16004669)
chr4 (406-535)||(16917495-16917624)
chr4 (107-160)||(25505205-25505258)
chr4 (396-516)||(39103533-39103653)
chr4 (401-516)||(12756293-12756408)
chr4 (406-522)||(17616413-17616529)
chr4 (400-444)||(47302342-47302386)
chr4 (400-444)||(51435812-51435856)
chr4 (401-535)||(5970700-5970835)
chr4 (396-443)||(29582329-29582376)
chr4 (401-444)||(41759660-41759703)
chr4 (472-531)||(48018404-48018463)
chr4 (394-535)||(38955036-38955178)
chr4 (461-535)||(42080389-42080463)
chr4 (422-516)||(43349089-43349182)
chr4 (406-532)||(50716487-50716613)
chr4 (399-535)||(1605589-1605726)
chr4 (36-93)||(12885049-12885106)
chr4 (396-516)||(24979938-24980058)
chr4 (474-535)||(27636011-27636072)
chr4 (399-535)||(42177341-42177478)
chr4 (406-535)||(46548633-46548762)
chr4 (408-516)||(53973464-53973572)
chr4 (474-535)||(56017066-56017127)
chr4 (399-521)||(3690797-3690920)
chr4 (167-249)||(12885645-12885724)
chr4 (400-535)||(27761400-27761536)
chr4 (475-535)||(36631111-36631171)
chr4 (400-444)||(38836212-38836256)
chr4 (439-535)||(43363599-43363695)
chr4 (400-444)||(52592155-52592199)
chr4 (472-535)||(2443610-2443672)
chr4 (476-535)||(13548481-13548540)
chr4 (400-531)||(37748702-37748833)
chr4 (400-522)||(39412169-39412291)
chr4 (476-531)||(42680675-42680730)
chr4 (484-535)||(46222077-46222128)
chr4 (396-535)||(46549025-46549163)
chr4 (397-532)||(48058750-48058885)
chr4 (402-444)||(30343190-30343232)
chr4 (398-444)||(33075977-33076023)
chr4 (406-524)||(34791886-34792004)
chr4 (424-522)||(36188178-36188276)
chr4 (399-516)||(45692621-45692739)
chr4 (461-535)||(52257403-52257477)
chr4 (402-444)||(53388848-53388890)
chr4 (485-535)||(54499845-54499895)
chr4 (400-516)||(3763402-3763519)
chr4 (400-516)||(19595222-19595338)
chr4 (400-444)||(27950258-27950303)
chr4 (406-535)||(40319271-40319400)
chr4 (431-535)||(46630676-46630781)
chr4 (474-535)||(47920546-47920607)
chr4 (400-516)||(352474-352590)
chr4 (400-444)||(3716687-3716731)
chr4 (475-535)||(9356457-9356517)
chr4 (423-535)||(30951147-30951259)
chr4 (475-535)||(32288979-32289039)
chr4 (402-442)||(37855486-37855526)
[»] chr2 (94 HSPs)
chr2 (401-532)||(37909632-37909763)
chr2 (403-535)||(11598386-11598518)
chr2 (403-535)||(20212156-20212288)
chr2 (400-534)||(34438187-34438321)
chr2 (400-535)||(6513262-6513397)
chr2 (398-535)||(43690020-43690157)
chr2 (400-535)||(32499416-32499551)
chr2 (402-529)||(36489548-36489675)
chr2 (400-535)||(6438172-6438307)
chr2 (402-516)||(33412996-33413110)
chr2 (414-535)||(12547638-12547759)
chr2 (107-265)||(20506600-20506749)
chr2 (422-535)||(40370742-40370855)
chr2 (104-249)||(8267385-8267523)
chr2 (36-249)||(11033116-11033322)
chr2 (101-265)||(37605880-37606036)
chr2 (101-250)||(39303420-39303562)
chr2 (46-249)||(36520897-36521091)
chr2 (395-535)||(34665841-34665981)
chr2 (399-535)||(38073105-38073240)
chr2 (36-249)||(36076296-36076504)
chr2 (400-535)||(38617728-38617862)
chr2 (406-535)||(22595007-22595136)
chr2 (104-160)||(21136417-21136473)
chr2 (459-534)||(19636164-19636239)
chr2 (459-534)||(19834757-19834832)
chr2 (107-228)||(13536885-13536999)
chr2 (406-535)||(15354702-15354832)
chr2 (474-532)||(19268640-19268698)
chr2 (406-535)||(29943826-29943955)
chr2 (400-532)||(37781866-37781998)
chr2 (400-516)||(41555431-41555547)
chr2 (400-444)||(5389202-5389246)
chr2 (36-88)||(6606258-6606310)
chr2 (423-535)||(12071426-12071536)
chr2 (400-535)||(42640850-42640984)
chr2 (401-444)||(1353868-1353911)
chr2 (472-535)||(5155766-5155829)
chr2 (399-535)||(33494205-33494343)
chr2 (461-531)||(6588297-6588367)
chr2 (400-516)||(9589403-9589520)
chr2 (400-516)||(15362469-15362585)
chr2 (400-535)||(1580247-1580383)
chr2 (406-522)||(3911510-3911626)
chr2 (400-444)||(4673601-4673645)
chr2 (404-535)||(8362405-8362536)
chr2 (400-444)||(37083573-37083617)
chr2 (399-535)||(3383190-3383328)
chr2 (398-516)||(9122154-9122273)
chr2 (405-444)||(15771314-15771353)
chr2 (36-160)||(20511689-20511812)
chr2 (400-534)||(35292783-35292918)
chr2 (399-529)||(45690498-45690628)
chr2 (406-444)||(11813198-11813236)
chr2 (429-535)||(25712748-25712853)
chr2 (400-516)||(7673295-7673412)
chr2 (400-516)||(32602303-32602420)
chr2 (400-516)||(34188825-34188941)
chr2 (104-160)||(4079346-4079402)
chr2 (36-88)||(13511161-13511213)
chr2 (400-444)||(14532824-14532868)
chr2 (403-451)||(17451285-17451333)
chr2 (400-515)||(25331455-25331571)
chr2 (400-535)||(35895311-35895447)
chr2 (476-531)||(2283241-2283296)
chr2 (396-531)||(4114659-4114793)
chr2 (484-535)||(5084924-5084975)
chr2 (400-446)||(8333891-8333938)
chr2 (423-522)||(10456070-10456169)
chr2 (401-535)||(12002617-12002750)
chr2 (400-534)||(12182831-12182965)
chr2 (462-529)||(16637091-16637158)
chr2 (484-535)||(16814936-16814987)
chr2 (484-535)||(16854216-16854267)
chr2 (400-451)||(21404198-21404249)
chr2 (484-535)||(36049549-36049600)
chr2 (401-444)||(38963068-38963111)
chr2 (472-535)||(40588150-40588212)
chr2 (402-444)||(11227989-11228031)
chr2 (461-535)||(21425480-21425554)
chr2 (461-535)||(26738303-26738377)
chr2 (399-516)||(34852354-34852471)
chr2 (422-516)||(40810709-40810802)
chr2 (402-443)||(3810452-3810493)
chr2 (422-535)||(15205765-15205877)
chr2 (476-521)||(25740272-25740317)
chr2 (406-535)||(36023858-36023986)
chr2 (403-535)||(45555653-45555786)
chr2 (400-535)||(1860198-1860334)
chr2 (406-522)||(13119101-13119217)
chr2 (410-522)||(13507264-13507376)
chr2 (431-535)||(18008986-18009090)
chr2 (503-535)||(21836556-21836588)
chr2 (402-513)||(45157806-45157918)
[»] scaffold0604 (1 HSPs)
scaffold0604 (401-535)||(2291-2425)
[»] chr5 (75 HSPs)
chr5 (400-562)||(28332366-28332528)
chr5 (398-535)||(13795271-13795407)
chr5 (406-529)||(2318431-2318555)
chr5 (400-535)||(12362357-12362492)
chr5 (396-535)||(21051317-21051456)
chr5 (400-535)||(13091184-13091319)
chr5 (401-535)||(3425090-3425223)
chr5 (400-535)||(14967502-14967637)
chr5 (399-535)||(27117986-27118122)
chr5 (404-532)||(9589482-9589610)
chr5 (401-535)||(29744173-29744307)
chr5 (398-535)||(37431348-37431485)
chr5 (406-535)||(41802378-41802507)
chr5 (424-535)||(35817373-35817484)
chr5 (422-535)||(35682365-35682478)
chr5 (399-535)||(31588506-31588642)
chr5 (101-249)||(41732259-41732400)
chr5 (400-522)||(17069269-17069391)
chr5 (398-535)||(22780783-22780921)
chr5 (399-535)||(34302918-34303055)
chr5 (398-444)||(32467405-32467451)
chr5 (400-468)||(4039469-4039538)
chr5 (399-444)||(13410904-13410949)
chr5 (406-535)||(15264314-15264443)
chr5 (162-265)||(28440819-28440918)
chr5 (400-516)||(40756541-40756657)
chr5 (403-531)||(36156116-36156244)
chr5 (36-88)||(43585682-43585734)
chr5 (400-535)||(13645520-13645655)
chr5 (400-516)||(5204617-5204733)
chr5 (400-516)||(6260307-6260424)
chr5 (403-516)||(13119089-13119202)
chr5 (123-263)||(37941227-37941359)
chr5 (400-516)||(39939033-39939149)
chr5 (391-444)||(42917480-42917533)
chr5 (423-535)||(1490710-1490822)
chr5 (423-531)||(2270807-2270915)
chr5 (402-516)||(9604433-9604548)
chr5 (400-534)||(32624448-32624583)
chr5 (461-535)||(25395073-25395147)
chr5 (460-522)||(33654889-33654951)
chr5 (396-522)||(35777377-35777503)
chr5 (401-535)||(39816506-39816640)
chr5 (475-532)||(4839521-4839578)
chr5 (403-535)||(6561096-6561229)
chr5 (399-535)||(13127251-13127388)
chr5 (406-535)||(43167213-43167342)
chr5 (399-446)||(5512681-5512729)
chr5 (400-535)||(13588864-13589000)
chr5 (396-516)||(27980064-27980184)
chr5 (406-522)||(41609369-41609485)
chr5 (403-522)||(1445729-1445848)
chr5 (474-533)||(7456282-7456341)
chr5 (484-535)||(10453551-10453602)
chr5 (424-535)||(14575497-14575608)
chr5 (484-535)||(19126184-19126235)
chr5 (36-91)||(19527959-19528014)
chr5 (472-535)||(20464850-20464912)
chr5 (399-521)||(23408538-23408660)
chr5 (495-534)||(31076817-31076856)
chr5 (403-516)||(5140672-5140785)
chr5 (404-521)||(19189393-19189510)
chr5 (406-535)||(14054684-14054813)
chr5 (432-521)||(18002684-18002772)
chr5 (400-516)||(23690501-23690617)
chr5 (476-533)||(28205047-28205104)
chr5 (403-535)||(34259810-34259943)
chr5 (400-468)||(39979681-39979750)
chr5 (399-535)||(2148126-2148262)
chr5 (423-531)||(10400724-10400832)
chr5 (400-444)||(24098232-24098276)
chr5 (400-444)||(36427905-36427949)
chr5 (431-534)||(37963025-37963129)
chr5 (400-452)||(42486605-42486657)
chr5 (400-444)||(43237355-43237399)
[»] scaffold0113 (1 HSPs)
scaffold0113 (400-529)||(29521-29651)
[»] chr8 (90 HSPs)
chr8 (400-534)||(37465955-37466089)
chr8 (410-535)||(16323829-16323954)
chr8 (399-535)||(529541-529677)
chr8 (400-535)||(17642344-17642479)
chr8 (414-532)||(39347146-39347264)
chr8 (402-535)||(43485053-43485186)
chr8 (403-535)||(2273280-2273412)
chr8 (397-535)||(13482906-13483042)
chr8 (400-534)||(43049807-43049941)
chr8 (445-535)||(26439568-26439658)
chr8 (101-249)||(1214246-1214387)
chr8 (403-535)||(39029587-39029719)
chr8 (395-531)||(2732066-2732194)
chr8 (397-535)||(43921401-43921540)
chr8 (36-265)||(28430011-28430234)
chr8 (439-534)||(4475304-4475399)
chr8 (403-532)||(42444244-42444372)
chr8 (406-521)||(36886168-36886283)
chr8 (406-516)||(19718333-19718435)
chr8 (36-278)||(17844887-17845125)
chr8 (400-535)||(31158825-31158960)
chr8 (36-265)||(13241123-13241343)
chr8 (423-520)||(12107508-12107604)
chr8 (406-535)||(32718961-32719090)
chr8 (399-516)||(29454142-29454260)
chr8 (406-535)||(19725317-19725446)
chr8 (406-535)||(43460621-43460750)
chr8 (400-444)||(34332473-34332517)
chr8 (399-531)||(36672009-36672141)
chr8 (400-444)||(39170998-39171042)
chr8 (105-249)||(5725831-5725970)
chr8 (401-444)||(23286927-23286970)
chr8 (398-535)||(27970283-27970419)
chr8 (386-535)||(31893319-31893468)
chr8 (400-516)||(2261303-2261420)
chr8 (400-444)||(946333-946377)
chr8 (400-444)||(28090552-28090596)
chr8 (400-444)||(29459997-29460041)
chr8 (400-444)||(44935260-44935304)
chr8 (472-535)||(3642945-3643008)
chr8 (36-160)||(12722313-12722437)
chr8 (400-535)||(17792475-17792610)
chr8 (400-443)||(29773807-29773850)
chr8 (400-450)||(26439509-26439559)
chr8 (474-535)||(27100886-27100947)
chr8 (406-522)||(2165037-2165153)
chr8 (400-535)||(3053070-3053206)
chr8 (403-531)||(6631388-6631516)
chr8 (400-459)||(6799783-6799843)
chr8 (427-535)||(12980284-12980392)
chr8 (474-534)||(18844234-18844294)
chr8 (399-439)||(23274991-23275031)
chr8 (423-519)||(35754483-35754577)
chr8 (400-444)||(37511451-37511495)
chr8 (400-535)||(38764738-38764873)
chr8 (36-90)||(23273825-23273879)
chr8 (401-533)||(28885955-28886087)
chr8 (425-535)||(36496170-36496280)
chr8 (400-516)||(7128090-7128207)
chr8 (402-535)||(27172185-27172318)
chr8 (474-535)||(29039688-29039749)
chr8 (402-521)||(34520857-34520975)
chr8 (399-535)||(36835613-36835750)
chr8 (400-516)||(40776637-40776754)
chr8 (406-522)||(9178726-9178842)
chr8 (400-444)||(15725890-15725934)
chr8 (128-263)||(17856810-17856937)
chr8 (36-88)||(24580033-24580085)
chr8 (400-444)||(29229176-29229220)
chr8 (427-515)||(34047444-34047531)
chr8 (423-535)||(42164931-42165042)
chr8 (400-535)||(44000561-44000697)
chr8 (402-516)||(118099-118214)
chr8 (484-535)||(196151-196202)
chr8 (484-535)||(310988-311039)
chr8 (400-446)||(9508857-9508904)
chr8 (406-516)||(37675943-37676054)
chr8 (400-451)||(38210675-38210726)
chr8 (476-531)||(38803709-38803764)
chr8 (400-534)||(40547690-40547824)
chr8 (473-535)||(12180192-12180254)
chr8 (473-535)||(12424620-12424682)
chr8 (36-78)||(12520564-12520606)
chr8 (396-522)||(24377586-24377712)
chr8 (474-519)||(6799847-6799892)
chr8 (476-533)||(12801379-12801436)
chr8 (402-451)||(39646639-39646688)
chr8 (474-522)||(4471518-4471566)
chr8 (423-535)||(24937608-24937720)
chr8 (423-535)||(36274587-36274699)
[»] scaffold0625 (1 HSPs)
scaffold0625 (400-535)||(6266-6401)
[»] scaffold0667 (1 HSPs)
scaffold0667 (397-534)||(104-242)
[»] scaffold0008 (2 HSPs)
scaffold0008 (400-535)||(45344-45479)
scaffold0008 (406-522)||(262831-262947)
[»] scaffold0283 (1 HSPs)
scaffold0283 (400-444)||(6600-6644)
[»] scaffold0077 (2 HSPs)
scaffold0077 (400-444)||(48371-48415)
scaffold0077 (400-444)||(58126-58170)
[»] scaffold0460 (1 HSPs)
scaffold0460 (473-520)||(8631-8678)
[»] scaffold0271 (1 HSPs)
scaffold0271 (395-457)||(17009-17072)
[»] scaffold0060 (1 HSPs)
scaffold0060 (473-535)||(46033-46095)
[»] scaffold0443 (1 HSPs)
scaffold0443 (103-160)||(7580-7637)
[»] scaffold0923 (1 HSPs)
scaffold0923 (399-469)||(22-92)
[»] scaffold0059 (1 HSPs)
scaffold0059 (406-522)||(70700-70816)
[»] scaffold0194 (1 HSPs)
scaffold0194 (484-534)||(17582-17632)
[»] scaffold0009 (1 HSPs)
scaffold0009 (399-516)||(214430-214547)
[»] scaffold0069 (1 HSPs)
scaffold0069 (194-226)||(2299-2331)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 1e-95; HSPs: 107)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 52033061 - 52032809
Alignment:
Q  1 cgtatattgtttatagaataatattgcgcgcccacggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnn 100  Q
    |||||||||||||||||||||||||||    ||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||           
T  52033061 cgtatattgtttatagaataatattgc----ccagggccggtctaagggccaagcaacccaagcaagggttttaggccacacaattttggatgaaaaaaa 52032966  T
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||| |||||||||||||||||||||||    
T  52032965 ggcctcgaaagaattaattttgttataagtatattatatgacatataaattatagacatt----tgcatagcttaaattattaccaaaaaagtctcaatt 52032870  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatatt 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52032869 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatatt 52032809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 21288813 - 21288948
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  21288813 gggaatttctacggtacacccgcaaattaaggtgtatcggtactcctacttcaaaaatctttaaattaactattatttttatggaatatagagctatttg 21288912  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||||||||    
T  21288913 ttgatatttatattttagaaaatgtcatttcataag 21288948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 27647886 - 27647751
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  27647886 gggaacttctacggtacacccgcaaattaaggtgtattggtactcctatttcaaaaatctttaaattaactattatttttatggaataaagagatatttg 27647787  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||||||||    
T  27647786 ttgatatttatattttagaaaatgtcatttcataag 27647751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 788473 - 788608
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  788473 gggaatttttacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctatttg 788572  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||  |||||| ||||||||||    
T  788573 ttgatatttatattttatgaaatgttatttcataag 788608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 3082178 - 3082312
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3082178 gggaatttctatggtacatccgcaaattaaggtgtatcggtactcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttg 3082277  T
Q  500 ttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||||||||||||||||||||||||||||||||    
T  3082278 ttgatatttatattttagaaaatgtcatttcataa 3082312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 396 - 529
Target Start/End: Complemental strand, 19547899 - 19547765
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagct 494  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||||||||||||||||||    
T  19547899 ttttgggaacttctacggtacacccacaaattaaggtgtaccggtactcctactttaaaaatctttaaattaattattattttttatggaataaagagct 19547800  T
Q  495 atttgttgatatttatattttagaaaatgtcattt 529  Q
    ||||||| |||||||||||||||||||||||||||    
T  19547799 atttgttaatatttatattttagaaaatgtcattt 19547765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 25592012 - 25592149
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtac--cggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  25592012 gggaacttctacggtacacccgtaaattaaggtgtacatcggtactcctacttcaaaaatcttttaattaactattatttttatggaataaagaactatt 25592111  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  25592112 tgttgatatttatattttagaaaatgttatttcataag 25592149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 271 - 380
Target Start/End: Original strand, 52031654 - 52031763
Alignment:
Q  271 aaaataaatagtgctacatgataaatcccttttatccttttaaaaattaataattaactctcttttatataaagaaatagtaaagataacaaaattgaaa 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52031654 aaaataaatagtgctacatgataaatcccttttatccttttaaaaaataataattaactctcttttatataaagaaatagtaaagataacaaaattgaaa 52031753  T
Q  371 ttgtgtaaga 380  Q
    ||||||||||    
T  52031754 ttgtgtaaga 52031763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 53516583 - 53516717
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||| ||||| |||||||| |||||||||||||||||||||||| ||||| |||||  |||||||||||| |||||||||||||||||||||||||||||    
T  53516583 ggaatttctatggtacacctgcaaattaaggtgtaccggtactcttactttaaaaaattttaaattaactattatttttatggaataaagagctatttgt 53516682  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||||||||||||||    
T  53516683 tgatatttatattttagaaaatgtcatttcataag 53516717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 421 - 533
Target Start/End: Complemental strand, 3136647 - 3136535
Alignment:
Q  421 gcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaa 520  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3136647 gcaaattaaagtgtaccggtactcctacttcaaaaacctttaaattaactattatttttatggaataaagagctatttgttgatatttatattttagaaa 3136548  T
Q  521 atgtcatttcata 533  Q
    |||||||||||||    
T  3136547 atgtcatttcata 3136535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 403 - 535
Target Start/End: Original strand, 29628986 - 29629118
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||| |||| || |||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  29628986 aacttctacgatacatccacaaattaaggtgtatcggtactcctacttcaaaactctttaaattaactattatttttttggaataaagagctatttgttg 29629085  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||| ||||||||||||||||||    
T  29629086 atatttatattttaaaaaatgtcatttcataag 29629118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 402 - 532
Target Start/End: Original strand, 52082045 - 52082175
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| |||| ||||||||||| |||||| || ||||||||    
T  52082045 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaatgaactattatttttatgaaataaaaagttatttgtt 52082144  T
Q  502 gatatttatattttagaaaatgtcatttcat 532  Q
    ||||||||||||||||||||| |||||||||    
T  52082145 gatatttatattttagaaaatatcatttcat 52082175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 408 - 535
Target Start/End: Complemental strand, 7672198 - 7672071
Alignment:
Q  408 ctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatt 507  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||  | ||| |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  7672198 ctacggtacatccgtaaattaaggtgtaccggtactcctacttcaaattttttttaattaactattatttttacggaataaagagatatttgttgatatt 7672099  T
Q  508 tatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||| |||||    
T  7672098 tatattttagaaaatgtcattttataag 7672071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 400 - 529
Target Start/End: Original strand, 4663146 - 4663275
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||| |||||||||||||||||||||||||| | ||| |||||  |||||||||||| |||||||||| ||||| || ||||||||    
T  4663146 gggaacttctacggtacatccgcaaattaaggtgtaccggtactcatgctttaaaaaaatttaaattaactattatttttatagaatatagtgctatttg 4663245  T
Q  500 ttgatatttatattttagaaaatgtcattt 529  Q
    ||||||||||||||||| ||||||||||||    
T  4663246 ttgatatttatattttaaaaaatgtcattt 4663275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 422 - 535
Target Start/End: Original strand, 43714024 - 43714137
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    |||||||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||  || |||||||||||||||||||    
T  43714024 caaattaatgtgtatcggtattcctacttcaaaaatttttaaattaactattatttttatgaaataaagagctattcattaatatttatattttagaaaa 43714123  T
Q  522 tgtcatttcataag 535  Q
    ||| |||| |||||    
T  43714124 tgttattttataag 43714137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 431 - 534
Target Start/End: Complemental strand, 45519003 - 45518900
Alignment:
Q  431 gtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 530  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||| | | ||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  45519003 gtgtaccggtactcccacttcaaaaatttttaaattaactattattttgaagaaataaagagatatttattgatatttatagtttagaaaatgtcatttc 45518904  T
Q  531 ataa 534  Q
    ||||    
T  45518903 ataa 45518900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 454 - 535
Target Start/End: Complemental strand, 32718004 - 32717923
Alignment:
Q  454 aaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||| |||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||    
T  32718004 aaatctttaaatgaactattatttttatgaaataaaaagttatttgttgatatttatattttagaaaatgtcattacataag 32717923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 29806415 - 29806280
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| | ||||  |||||| |||||||||  ||| ||||||| |||||| |  ||||||    
T  29806415 gggaacttctacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacaattaattttatgaaataaataattatttg 29806316  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
         |||||||||||||||||| ||||||||||||    
T  29806315 ccagcatttatattttagaaaatatcatttcataag 29806280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 1129129 - 1129265
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||  | | |||||||| |||||| ||||||||    
T  1129129 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 1129228  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||| ||||  ||||||||||||    
T  1129229 gtcaatatttatattttataaaacatcatttcataag 1129265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 52776453 - 52776584
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| |||||||||||||||| || ||||||||| | ||| |||||  ||||||| ||| ||||||||  ||||| ||     
T  52776453 acttctacggtacacctcataaattgaggtgtaccggtactcatatttcaaaaatttataatttaacgattatttt-atgaaataaagaattatttatta 52776551  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||| |||||| |||||    
T  52776552 atatttatattttagaaaatatcattttataag 52776584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 265
Target Start/End: Original strand, 26536389 - 26536539
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctctt 206  Q
    |||||||||||||| |||||||||||||||| | ||| ||||| ||||||||||  |    ||| ||||||| |||| ||||||   ||||||| || ||    
T  26536389 taaaaaattaatttggttataagtatattatcttacagataaactatagacattcgt----atagcttaactgattatcaaaaatacctcaattactttt 26536484  T
Q  207 ggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatattctgt 265  Q
    |||||| ||||||| |||||||   |||||||||||||| |||||| ||||||||||||    
T  26536485 ggtcataaattcaagttttggt---ctccacaaaattga-ttttatataaatattctgt 26536539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 527
Target Start/End: Original strand, 54262540 - 54262671
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||||||||||||||||||||| | | |||||| ||||||||| ||||| | ||||  |||||| |||||||||  | | ||||||| |||||| || ||    
T  54262540 ttttgggaacttctacggtacatcagtaaattatggtgtaccgatactcttgcttcttaaatctataaattaacaatcaattttatgaaataaatagtta 54262639  T
Q  496 tttgttgatatttatattttagaaaatgtcat 527  Q
    |||||||  ||||| |||||||||||| ||||    
T  54262640 tttgttggcatttagattttagaaaatatcat 54262671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 11140653 - 11140607
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11140653 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 11140607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 398 - 531
Target Start/End: Complemental strand, 19914442 - 19914309
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||| |||||  ||| || || |||||||||||||||||||||| | ||||| |||||| |||||||||  | | ||||||| |||||| || ||||    
T  19914442 ttgggaatttctagagtatactcgtaaattaaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaatagttatt 19914343  T
Q  498 tgttgatatttatattttagaaaatgtcatttca 531  Q
    ||| |  |||||||||||||||||| | ||||||    
T  19914342 tgtcggcatttatattttagaaaatatgatttca 19914309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 8324788 - 8324672
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||||||||||||  |||||||||||||| |||| |||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| | ||      
T  8324788 ttctacggtacacccgtcaattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgaat 8324689  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  8324688 tttatattttagaaaat 8324672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 534
Target Start/End: Original strand, 35375510 - 35375646
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| | |||||| ||||||| |||||||| |  |||| |||| | |||||||||  | |||| |||  ||||||||||||||    
T  35375510 tgggaacttctacggtacacctcacaaattgaggtgtatcggtactcttgattcataaatttataaattaacaatcatttatattaaataaagagctatt 35375609  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||  ||||||| ||||||| |||| |||| ||||||    
T  35375610 tgtcaatatttaaattttaggaaatatcatgtcataa 35375646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 42067984 - 42067941
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42067984 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 42067941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 26104596 - 26104478
Alignment:
Q  103 cctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtc-tcaattg 201  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||     |||||||| ||||| | | ||  ||||||| | ||||||     
T  26104596 cctctaaaaaattaatttagttataattatattatatgacaaataaattagagac----gtttgcatagcttaattgaata-taaaaaagacatcaatta 26104502  T
Q  202 ctcttggtcatgaattcaaatttt 225  Q
    ||||||||||||||||||||||||    
T  26104501 ctcttggtcatgaattcaaatttt 26104478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 29786531 - 29786577
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  29786531 ttgggaacttctacggtacacctgcaaattaaggtgtaccggtactc 29786577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 535
Target Start/End: Original strand, 52457945 - 52458083
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||  |||||||||| ||||  |||||||||||||||||||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | |    
T  52457945 tttgggagtttctacggtatacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgt 52458044  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    || | ||  ||||||||||| ||||| ||||||||||||    
T  52458045 ttatcgacttttatattttaaaaaatatcatttcataag 52458083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 522
Target Start/End: Complemental strand, 8433835 - 8433710
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||| |||||||||||||||| | | |||||  ||||||||||||||| | ||||  |||| | |||||||||  ||| ||||||| |||||| || |||    
T  8433835 tttgagaacttctacggtacatctgtaaattgtggtgtaccggtactcttgcttcttaaatttataaattaacaattaattttatgaaataaatagttat 8433736  T
Q  497 ttgttgatatttatattttagaaaat 522  Q
    |||| |  ||||||||||||||||||    
T  8433735 ttgtcggcatttatattttagaaaat 8433710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 19608691 - 19608562
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||||| ||||   |||||||||||||||| ||| |||  |||| |||||  ||| |||||  | ||||||||| || |||||||||||||| ||      
T  19608691 ttctacggttcaccattaaattaaggtgtaccgatacacctgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttgtcgact 19608592  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  19608591 tttatattttagaaaatattatttcataag 19608562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 44379413 - 44379550
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||    | |||||||| |||||| | |||||    
T  44379413 tgggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactatt 44379512  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  |||||||||||||| | ||  ||||||||||||    
T  44379513 tgtcaatatttatattttatagaacatcatttcataag 44379550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 500
Target Start/End: Complemental strand, 9252259 - 9252159
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| || ||||| |||||||||||||||| | ||||| | |||| |||||||||  | | ||||||| |||||| || ||||||    
T  9252259 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcatatatctataaattaacgatcaattttatgaaataaatagttatttg 9252160  T
Q  500 t 500  Q
    |    
T  9252159 t 9252159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 38785082 - 38785218
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctactt-caaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| |||||||| |||||||||||||||   ||| |||   | | |||||||||| | ||||||||| |  ||| || | |||    
T  38785082 gggaacttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaattttttataaattaactataatttttatgaagaaaataggtgttt 38785181  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||| || ||||||||||||||| |||||| |||||    
T  38785182 gttgacatatatattttagaaaatatcattttataag 38785218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 406 - 534
Target Start/End: Original strand, 52178959 - 52179087
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  ||||||||||||||||||||   |  |||| |||||  ||| |||||  | ||||||||| || |||||||||||| | ||      
T  52178959 ttctacggtacacccttaaattaaggtgtaccggtacatttgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttatcgact 52179058  T
Q  506 tttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||||||||| | |||||||||    
T  52179059 tttatattttagaaaatattatttcataa 52179087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 8966337 - 8966202
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||| ||||  |||| | |  ||||||  | | ||||||| |||||| || ||||||    
T  8966337 gggaacttctacggtacactcataaattaaggtgtaccggtactcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttg 8966238  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||| ||| | ||||||| ||||||||||||    
T  8966237 tcggcatttgtatctcagaaaatatcatttcataag 8966202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 521
Target Start/End: Complemental strand, 40284311 - 40284196
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||||||||||| ||| | || |||| ||||   ||| |||||  ||||||||||| ||||||||  ||||||| ||      
T  40284311 ttctacggtacacccttaaattaaggtgtaccgatacacttatttcataaataaataagttaacgattatttttatgtaataaagaaatatttgtcgact 40284212  T
Q  506 tttatattttagaaaa 521  Q
    ||||||||||||||||    
T  40284211 tttatattttagaaaa 40284196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 516
Target Start/End: Complemental strand, 43903481 - 43903363
Alignment:
Q  398 ttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||||||||||||||||| | |||||| ||||||| |||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| |||    
T  43903481 ttgggaacttctacggtacacctcacaaattgaggtgtatcggtactcctccttcaaatatttacaatttaacgatta-ttttatgaaataaagagttat 43903383  T
Q  497 ttgttgatatttatatttta 516  Q
    || |  ||||||||||||||    
T  43903382 ttatcaatatttatatttta 43903363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 52024438 - 52024569
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||| |||||| || ||||| |||||||| ||||||| |  |||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  52024438 gggaacttctactgtacactcgtaaattgaggtgtacaggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 52024537  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | |  |||||||||||||||||| | ||||||    
T  52024538 tcggcatttatattttagaaaatatgatttca 52024569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 398 - 516
Target Start/End: Original strand, 4817074 - 4817192
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||| ||||||||||||| | |||| | |||||||||||||||| ||||| | || | | |||||||||  | ||||||||| |||||| || ||||    
T  4817074 ttgggaatttctacggtacactcacaaaatgaggtgtaccggtactcttactttataattttataaattaacgatcatttttatgtaataaatagttatt 4817173  T
Q  498 tgttgatatttatatttta 516  Q
    | |  ||||||||||||||    
T  4817174 tatcaatatttatatttta 4817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 37492304 - 37492258
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  37492304 ttgggaacttctacggtacatccgcaaattacggtgtaccggtactc 37492258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 45602024 - 45602158
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||| ||| |||||| |||||||| ||||||| ||||| || | ||||  |||||| |||||||||  ||| ||||||| |||||| || ||||||    
T  45602024 gggaacttatactgtacactcgcaaattgaggtgtatcggtattcttgcttcttaaatctataaattaacgattaattttatgaaataaatagttatttg 45602123  T
Q  500 ttgatatttatattttagaaaatgtcatttcataa 534  Q
         |||||||||||||||| | |||||||||||    
T  45602124 ccagcatttatattttagaaagtatcatttcataa 45602158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 535
Target Start/End: Complemental strand, 23796153 - 23796048
Alignment:
Q  430 ggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 529  Q
    ||||||||||||||| ||||||  |||||| |||||||||  | | ||||||| |||||| |  ||||||| |  |||||||||||||||||| |||| |    
T  23796153 ggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaaaatatcatgt 23796054  T
Q  530 cataag 535  Q
    ||||||    
T  23796053 cataag 23796048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 427 - 535
Target Start/End: Original strand, 39252917 - 39253026
Alignment:
Q  427 taaggtgtaccggtactcctacttcaaaaatctttaaattaactgttattttt-atggaataaagagctatttgttgatatttatattttagaaaatgtc 525  Q
    |||||||||||||||||  || |||| || | | |||||||||  |||||||| ||| |||||| ||||||||||  |||||||||||||| ||||  ||    
T  39252917 taaggtgtaccggtacttttatttcataattttataaattaacaattattttttatgtaataaatagctatttgtcaatatttatattttataaaacatc 39253016  T
Q  526 atttcataag 535  Q
    ||||||||||    
T  39253017 atttcataag 39253026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 40478164 - 40478048
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||  | | |||||||| |||||| ||||||||    
T  40478164 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 40478065  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  40478064 -tcaatatttatatttta 40478048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 522
Target Start/End: Original strand, 41574749 - 41574858
Alignment:
Q  413 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatat 512  Q
    ||||||||  |||||||| |||||| |||| |||| |||| |||||  ||| ||||   ||||||||||| ||||||||| ||||| ||||  |||||||    
T  41574749 gtacacccttaaattaagatgtaccagtacacctaattcataaatcaataagttaatgattatttttatgtaataaagagatatttattgacttttatat 41574848  T
Q  513 tttagaaaat 522  Q
    ||||||||||    
T  41574849 tttagaaaat 41574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 41902349 - 41902220
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| ||  ||||||||||||| |||||| |||  |||| ||||   |||  ||||  | ||||||||| || |||||||||||||| ||      
T  41902349 ttctacggtacatccttaaattaaggtgtatcggtacacctgtttcataaattaataagctaacgatcatttttatgtaaaaaagagctatttgtcgact 41902250  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  41902249 tttatattttagaaaatattatttcataag 41902220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 42479091 - 42478974
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||  | |||| |||||||||||||||||| |  |||| || | | |||||||||  | | |||||||| |||||| | ||||||    
T  42479091 gggaacttctacggtacattcacaaaataaggtgtaccggtactcttgtttcataattttataaattaacgataattttttatgtaataaataactattt 42478992  T
Q  499 gttgatatttatatttta 516  Q
    ||| ||||||||||||||    
T  42478991 gttaatatttatatttta 42478974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 882131 - 881995
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| || |||||   |||||||| ||||  |  |||| ||||| | |||||||||  | ||||||||  |||||| || |||||    
T  882131 gggaacttctacggtacactcggaaattttagtgtaccgatacttttgtttcacaaaatttataaattaacgatcatttttataaaataaaaagttattt 882032  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  ||||||||||||||||||| ||||| |||||||    
T  882031 gtcaatatttatattttagaaaacgtcatatcataag 881995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 26409630 - 26409765
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| |  |||||   |||||||||||||| |  |||| ||||| | |||||||||  | ||||||||| |||||| || |||||    
T  26409630 gggaacttctacggtacactcagaaattttagtgtaccggtactcttgtttcacaaaatttataaattaacgatcatttttatgaaataaaaagttattt 26409729  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  ||||||||||||| ||||| ||||| |||||||    
T  26409730 gtcaatatttatatttt-gaaaacgtcatatcataag 26409765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 444
Target Start/End: Original strand, 29347307 - 29347355
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  29347307 ttttgggaacttctacggtacacccgcaaattgcagtgtaccggtactc 29347355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 37627010 - 37627070
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||  |||||||||||||||||| ||||||||||||||| |||  |||||||||||    
T  37627010 atttttattaaataaagagctatttgttaatatttatattttaggaaacatcatttcataa 37627070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 39629947 - 39629991
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtact 443  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  39629947 tgggaacttctacggtacatccgcaaattaagatgtaccggtact 39629991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 535
Target Start/End: Original strand, 42621844 - 42621984
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagct 494  Q
    ||||||||||||||||||||||| | |||| | ||||||||| |||||| | ||||| || | | |||||||||    | |||||||| |||||| || |    
T  42621844 ttttgggaacttctacggtacactcacaaaatgaggtgtaccagtactcttgcttcataattttataaattaacgaccattttttatgtaataaatagtt 42621943  T
Q  495 atttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||  |||||||||||||| | ||  ||||||||||||    
T  42621944 atttgtcaatatttatattttatagaacatcatttcataag 42621984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 44366015 - 44365971
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  44366015 gggaacttctatggtacacccgtaaattaaggtgtaccggtactc 44365971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 54911148 - 54911032
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||||| |||| |||| || | |||| | |||||||||  | |||||||||  |||||||| ||||| | ||      
T  54911148 ttctacggtacacccttcaattaaggtgtaccagtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgact 54911049  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  54911048 tttatattttagaaaat 54911032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 516
Target Start/End: Original strand, 32121897 - 32122015
Alignment:
Q  398 ttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||||||||||||||||| | |||| | |||||||||||||||||| ||||||| || |  || |||||| ||| ||||||| |||||| || |||    
T  32121897 ttgggaacttctacggtacacctcacaaagtgaggtgtaccggtactcctgcttcaaatatttacaatttaactatta-ttttatgaaataaaaagttat 32121995  T
Q  497 ttgttgatatttatatttta 516  Q
    || |  |||||| |||||||    
T  32121996 ttatcaatatttctatttta 32122015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 37520702 - 37520837
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||  | | |||||||| |||||| | ||||||    
T  37520702 gggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaataaataactattt 37520801  T
Q  499 gttgatatttatattttagaaaatgtcatttcataa 534  Q
     |  |||||||||||||| | ||  |||||||||||    
T  37520802 atcaatatttatattttatagaacatcatttcataa 37520837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 516
Target Start/End: Complemental strand, 47746233 - 47746118
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttattttt-atggaataaagagctatttgt 500  Q
    ||||||||||||||||| | |||| | |||||||||| ||||| | ||||| || | | |||||||||  | |||||| ||| |||||| ||||||||||    
T  47746233 gaacttctacggtacactcacaaaatgaggtgtaccgatactcttgcttcataattttataaattaacgataattttttatgtaataaatagctatttgt 47746134  T
Q  501 tgatatttatatttta 516  Q
      ||||||||||||||    
T  47746133 caatatttatatttta 47746118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 48795439 - 48795510
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaact 470  Q
    |||||||||||||||||||| | |||||| |||||||||||||||| |||| || |||| | ||||||||||    
T  48795439 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcttactccataaatttataaattaact 48795510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 5529100 - 5528966
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||| |||||||||||||| |  ||| | |||||||||||||||| | | ||  |||||| ||||||||   | | ||||||| |||| | || ||||||    
T  5529100 gggagcttctacggtacactcttaaaatgaggtgtaccggtactcttccatcccaaatctataaattaatgatcaattttatgaaatagatagttatttg 5529001  T
Q  500 ttgatatttatattttagaaaatgtcatttcataa 534  Q
    | | ||||||||||||| ||||| |||||||||||    
T  5529000 tcgctatttatattttataaaatatcatttcataa 5528966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 516
Target Start/End: Complemental strand, 7862848 - 7862734
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttattttt-atggaataaagagctatttgtt 501  Q
    |||||||| ||||||  | |||| | |||||||||||||||||| ||||| || | | |||||||||  | |||||| ||| |||||| ||||||||||     
T  7862848 aacttctatggtacattcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgtc 7862749  T
Q  502 gatatttatatttta 516  Q
     ||||||||||||||    
T  7862748 aatatttatatttta 7862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 516
Target Start/End: Complemental strand, 23456861 - 23456747
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgtt 501  Q
    |||||||||||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||  | | |||||||| |||||| |||| |||||     
T  23456861 aacttctacggtacactcacaaagtgaggtgtaccggtactccttcttcataattttataaattaacgataattttttatgtaataaatagctctttgtc 23456762  T
Q  502 gatatttatatttta 516  Q
     ||| ||||||||||    
T  23456761 aatagttatatttta 23456747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 35501197 - 35501079
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||| ||||||| | |||| | |||||||||||||||||| ||||  || ||| ||||| |||  | | |||||||| | |||| |||||||    
T  35501197 tgggaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattctataaataaacgatcattttttatgtagtaaatagctatt 35501098  T
Q  498 tgttgatatttatatttta 516  Q
    |||  ||||||||||||||    
T  35501097 tgtcaatatttatatttta 35501079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 265
Target Start/End: Original strand, 29019937 - 29020004
Alignment:
Q  194 ctcaattgctcttggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatattctgt 265  Q
    ||||||| |||||||||||||||||||||||    ||||||| ||||||||| |||||| ||||||||||||    
T  29019937 ctcaattactcttggtcatgaattcaaattt---cggtctcctcaaaattga-ttttatataaatattctgt 29020004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 29698322 - 29698438
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||| ||| || |  || |||||  ||| ||||||| ||||||||| |||||    
T  29698322 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgctttaaatatttacaatttaacgatta-ttttatgaaataaagagttattt 29698420  T
Q  499 gttgatatttatatttta 516  Q
     |  || |||||||||||    
T  29698421 atcaatttttatatttta 29698438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 32621739 - 32621610
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||| ||||  |||||||||||||  ||||| |||| |||| |||||  |||  |||   | ||||||||| || |||||||||||||| ||      
T  32621739 ttctacggtatacccttaaattaaggtgtattggtacacctatttcataaatcaataagataaagatcatttttatgaaacaaagagctatttgtcgact 32621640  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||| | ||||||||||    
T  32621639 tttatattttaaaaaatattatttcataag 32621610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 36220812 - 36220695
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||| ||||  | ||||| || | | |||||||||  ||| |||||||| |||||| | ||||||    
T  36220812 gggaacttctacggtacactcacaaagtgaggtgtaccgatacttttgcttcataattttataaattaacaattattttttatgtaataaatatctattt 36220713  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  36220712 gtcaatatttatatttta 36220695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 49950923 - 49951060
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||||||||||| ||||||| | ||| ||   |||||||||||||| || |||| ||||| | ||||||||   | | ||| ||| |||||| || ||||    
T  49950923 tgggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcacaaaatatataaattaaagatcactttaatgaaataaaaaggtatt 49951022  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  |||||||||||||||||||  ||||||||||||    
T  49951023 tgtcaatatttatattttagaaaacatcatttcataag 49951060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 51344778 - 51344662
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    |||||||||||||||||||   |||| |||||||||||||||||||| |||| | ||| ||  |||||||  | | |||||||| |||||| ||||||||    
T  51344778 gggaacttctacggtacacttacaaagtaaggtgtaccggtactcctgcttc-ataattttataattaacgatcattttttatgtaataaatagctattt 51344680  T
Q  499 gttgatatttatatttta 516  Q
    ||  | ||||||||||||    
T  51344679 gtcaaaatttatatttta 51344662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 876222 - 876266
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||| | ||||| |||||||    
T  876222 gggaacttctacggtacacccgcaaattacgatgtactggtactc 876266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 26456954 - 26457089
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttattttt-atggaataaagagctattt 498  Q
    ||||||||||||| ||||| |  ||| | ||||| |||||||||||| ||||| || | | |||||||||  | |||||| ||| |||||| ||||||||    
T  26456954 gggaacttctacg-tacactcataaagtgaggtgaaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 26457052  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||| | ||  ||||||||||||    
T  26457053 gtcaatatttatattttatagaacatcatttcataag 26457089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 42363928 - 42363972
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||    
T  42363928 gggaacttctacggtacacctgcaaattacggtgtatcggtactc 42363972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 532
Target Start/End: Original strand, 46868559 - 46868619
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    ||||||||||| ||||||||||||||||| ||  ||| |||| || |||||||||||||||    
T  46868559 ttatttttatgaaataaagagctatttgtcgaattttgtattgtaaaaaatgtcatttcat 46868619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 522
Target Start/End: Original strand, 46948647 - 46948743
Alignment:
Q  426 ttaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||| ||||| ||||| |||| |||| |||||  ||| ||||   ||||||||||| ||||||||| ||||||||||  |||||||||| ||||||    
T  46948647 ttaagatgtactggtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatattttggaaaat 46948743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 52782159 - 52782295
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||| ||||||| | ||| ||   |||||||||||||| |  |||| ||||| | ||||||||   ||| ||| ||| |||||| || |||||    
T  52782159 gggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaaagattactttaatgaaataaaaaggtattt 52782258  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||||||||  ||||||||||||    
T  52782259 gtcaatatttatattttagaaaacatcatttcataag 52782295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 53289229 - 53289281
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    |||||||||||||||||||| | |||| | |||||||||||||||||| ||||    
T  53289229 tgggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttc 53289281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 7157123 - 7157174
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  7157123 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 7157174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 35137846 - 35137795
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    ||||||||||||||||||| || ||| |||||||||||| ||||||| ||||    
T  35137846 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttc 35137795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 35352275 - 35352326
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  ||||||||||||||||||| |||||||||||||    
T  35352275 aataaaaaggtatttgtcaatatttatattttagaaaacgtcatttcataag 35352326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 53186326 - 53186275
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  53186326 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 53186275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 535
Target Start/End: Complemental strand, 55418109 - 55418050
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||| ||||||||||  || ||||||||||| ||||  ||||||||||||    
T  55418109 ttttatggaataaaaagctatttgtcaatgtttatattttaaaaaacatcatttcataag 55418050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 7347435 - 7347361
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  7347435 taaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 7347361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 521
Target Start/End: Original strand, 11510741 - 11510837
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||| ||||| ||||||||||||||||||||||| ||  |||||||  ||| ||||||| ||||||  | ||||| |  |||||||||||||||||||    
T  11510741 aaattgaggtgcaccggtactcctacttcaaaaat-ttataattaacgatta-ttttatgaaataaaatgttatttatcaatatttatattttagaaaa 11510837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 21795457 - 21795495
Alignment:
Q  40 ggcctaagggccaagcaacccaagcaagggctttaggcc 78  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  21795457 ggcctaagggccaagccatccaagcaagggctttaggcc 21795495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 468
Target Start/End: Complemental strand, 29815536 - 29815466
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaa 468  Q
    ||||||||||||||||||||| | |||||| |||||||||| | ||||| ||||| |||| | ||||||||    
T  29815536 tgggaacttctacggtacacctcacaaattgaggtgtaccgatgctcctgcttcataaatttataaattaa 29815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 33440764 - 33440722
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggcc 78  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||    
T  33440764 ggccagcccaagggccaagccacccaagcaagggctttaggcc 33440722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 522
Target Start/End: Original strand, 35748922 - 35749044
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||| ||||| || ||||  ||||||| |||||||| | ||||| |||||| ||||||||   | | ||||||  |||||| || ||||||    
T  35748922 gggaacttctacgatacactcgtaaatagaggtgtatcggtactcttgcttcataaatctataaattaatgatcaattttatcaaataaatagttatttg 35749021  T
Q  500 ttgatatttatattttagaaaat 522  Q
    | |  |||||||||||| |||||    
T  35749022 tcggcatttatattttaaaaaat 35749044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 535
Target Start/End: Complemental strand, 41982389 - 41982255
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||| | |||| | ||||||| |||||||| ||||| | || | | |||||| ||  | | |||||||| |||||| || |||||||    
T  41982389 gaacttctacggtacactcacaaagtgaggtgtatcggtactcttactttataattttataaattgacgataattttttatgtaataaatagttatttgt 41982290  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
      |||||||||||||| ||||   |||||||||||    
T  41982289 caatatttatattttataaaacaacatttcataag 41982255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 44653578 - 44653461
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| | |||| | |||||||||||||||| |  |||| || | | |||||||||  ||| |||||||| |||||| |||| ||    
T  44653578 tgggaacttctacggtacactcacaaaatgaggtgtaccggtactcttttttcataattttataaattaacgattattttttatgaaataaatagct-tt 44653480  T
Q  498 tgttgatatttatatttta 516  Q
    | |  ||||||||||||||    
T  44653479 tatcaatatttatatttta 44653461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 443
Target Start/End: Original strand, 44670260 - 44670302
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtact 443  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||    
T  44670260 ggaacttctacggtacatccgtaaattaaggtgtgccggtact 44670302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 446
Target Start/End: Original strand, 52058511 - 52058561
Alignment:
Q  397 tttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcct 446  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||||||||    
T  52058511 tttgggaacttctacggtacacctcacaaattggggtgtaccggtactcct 52058561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 26884973 - 26885090
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||  | |||||||||||||||| ||| ||  || | | |||||||||  ||| |||||||| | |||| || |||||    
T  26884973 gggaacttctacggtacactcacaagatgaggtgtaccggtactcttacatcttaattttataaattaacgattattttttatgtagtaaatagttattt 26885072  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  26885073 gtcaatatttatatttta 26885090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 535
Target Start/End: Original strand, 27102629 - 27102729
Alignment:
Q  434 taccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 533  Q
    ||||||||||||||||| |||||| | ||| |||| || |  ||||||| |||||| || ||||| || |||||||||||||| ||||  |||||| |||    
T  27102629 taccggtactcctactttaaaaatttataatttaa-tgatcattttatgtaataaatagttatttattaatatttatattttataaaacatcattttata 27102727  T
Q  534 ag 535  Q
    ||    
T  27102728 ag 27102729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 521
Target Start/End: Complemental strand, 34593982 - 34593937
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||||| ||||||||| || ||||||| |||||||||||||||||    
T  34593982 ttttatgaaataaagagttacttgttgacatttatattttagaaaa 34593937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Complemental strand, 39678437 - 39678396
Alignment:
Q  475 tttttatggaataaagagctatttgttgatatttatatttta 516  Q
    |||||||| |||||| ||||||||||| ||||||||||||||    
T  39678437 tttttatgaaataaatagctatttgttaatatttatatttta 39678396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 521
Target Start/End: Complemental strand, 46936996 - 46936951
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  46936996 ttttatgaaataaaaagctattagttaatatttatattttagaaaa 46936951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 47042665 - 47042706
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggc 77  Q
    |||||||||||||||||||| |||||| ||| ||||||||||    
T  47042665 ggccggcctaagggccaagccacccaaacaatggctttaggc 47042706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 48388854 - 48388895
Alignment:
Q  494 tatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||||||||||||||||  ||||||||||||    
T  48388854 tatttgtttatatttatattttagaaaacatcatttcataag 48388895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 48990626 - 48990565
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  48990626 attttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 48990565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 50560456 - 50560497
Alignment:
Q  494 tatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||||||||||||||||  ||||||||||||    
T  50560456 tatttgttaatatttatattttagaaaacatcatttcataag 50560497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 53461775 - 53461730
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaatta 152  Q
    |||||||| ||||| ||||||| |||||||||||||| ||||||||    
T  53461775 taaaaaataaatttggttataaatatattatatgacaaataaatta 53461730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 53461849 - 53461796
Alignment:
Q  37 gccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttgg 90  Q
    ||||||||||||||||||||||| |  |||||| |||||||| || ||||||||    
T  53461849 gccggcctaagggccaagcaacctacacaagggttttaggcctcaaaattttgg 53461796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 55365469 - 55365510
Alignment:
Q  494 tatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||||||||||||||||  ||||||||||||    
T  55365469 tatttgttaatatttatattttagaaaacatcatttcataag 55365510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 516
Target Start/End: Original strand, 8353067 - 8353178
Alignment:
Q  405 cttctacggtacacccg-caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttga 503  Q
    |||||||||||||||   |||||| |||||||  |||||| || ||||||| || | ||| ||||| |||||||| ||| ||||||||| ||||| |  |    
T  8353067 cttctacggtacaccttacaaattgaggtgtattggtacttctgcttcaaatatttataatttaacggttatttt-atgaaataaagagttatttatcaa 8353165  T
Q  504 tatttatatttta 516  Q
    |||||||||||||    
T  8353166 tatttatatttta 8353178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 46959958 - 46959914
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||| ||||||||||| |||||||| |||||| ||||||||    
T  46959958 gggaacttttacggtacacctgcaaattacggtgtatcggtactc 46959914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 1e-64; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 401 - 534
Target Start/End: Original strand, 15383204 - 15383337
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  15383204 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttgt 15383303  T
Q  501 tgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||||||||||||||||||||||||||    
T  15383304 tgatatttatattttagaaaatgtcatttcataa 15383337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 395 - 535
Target Start/End: Original strand, 6264938 - 6265078
Alignment:
Q  395 attttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagct 494  Q
    |||| |||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||    
T  6264938 atttagggaacttctacggtacatccacaaattaagatgtatcggtactcctacttcaaaaatcttctaattaactattatttttatggaataaagaact 6265037  T
Q  495 atttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6265038 atttgttgatatttatattttagaaaatgtcatttcataag 6265078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 8376024 - 8376155
Alignment:
Q  404 acttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttga 503  Q
    ||||||||||||||||| |||||||||||||| || |||||||| || |||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  8376024 acttctacggtacacccacaaattaaggtgtatcgatactcctattttaaaaatttttaaattaactattatttttatggaataaaaagctatttgttga 8376123  T
Q  504 tatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||| |||||||||||||||    
T  8376124 tatttatattttagaagatgtcatttcataag 8376155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 17010767 - 17010633
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||| | |||||||| |||||||    
T  17010767 ggaacttctaccgtacacccgtaaattaaagtgtatcggtactcctacttcaaaaatctttaaattaactattaattttataggataaagagttatttgt 17010668  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||| |||| |||||    
T  17010667 tgatatttatattttagaaaatgtaattttataag 17010633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 422 - 535
Target Start/End: Original strand, 30020379 - 30020492
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  30020379 caaagtaaggtgtaccgatactcctactttaaaaatctttaaattaactattatttttatgaaataaagaactatttgttgatatttatattttagaaaa 30020478  T
Q  522 tgtcatttcataag 535  Q
    ||| ||||||||||    
T  30020479 tgttatttcataag 30020492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 20469035 - 20469171
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||| ||||||| ||||||   |||||||||||||| ||||||| |||||||||||||| |||||||||| | ||||||||| |||||||||||||||    
T  20469035 tgggaatttctacgatacacctataaattaaggtgtacgggtactcttacttcaaaaatctataaattaactatcatttttatgaaataaagagctattt 20469134  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     ||||||||| ||||||||||||| ||||||||||||    
T  20469135 attgatatttgtattttagaaaatatcatttcataag 20469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 398 - 488
Target Start/End: Original strand, 34195877 - 34195967
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataa 488  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  34195877 ttgggaacttctacggtacatccgcaaattaaggtgtaccggtacttctacttcaaaaatctttaaattaactattatttttatggaataa 34195967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 36 - 225
Target Start/End: Complemental strand, 24209425 - 24209239
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnngg-cctctaaaaaattaattttgttataagtatat 134  Q
    ||||||| |||||||||||||||||||||||||||| |||||| || ||||||||| |        | |||||||||||||||||| |||||||||||||    
T  24209425 ggccggcttaagggccaagcaacccaagcaagggctataggcctcaaaattttggacgaaaaaaaagacctctaaaaaattaatttggttataagtatat 24209326  T
Q  135 tatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaatttt 225  Q
    ||||| | | ||||||||    |||  ||||||||| ||||| | ||||| ||||| |  |||||| || |||||||||||||||||||||    
T  24209325 tatatcatagataaatta----catgcatttgcataacttaattgattacaaaaaatgcttcaattactattggtcatgaattcaaatttt 24209239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 33105976 - 33106094
Alignment:
Q  123 ttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaat 222  Q
    |||||||| |||||||||||| |||||||| |||||||    |||||| ||||||| ||||||||||| | ||||||| |||| ||||||||||||||||    
T  33105976 ttataagtgtattatatgaca-ataaattacagacatt----tgcatagcttaactgattaccaaaaatgcctcaattactctaggtcatgaattcaaat 33106070  T
Q  223 tttggtggtctccacaaaattgatttt 249  Q
    ||   ||||||||||||||||||||||    
T  33106071 tt---tggtctccacaaaattgatttt 33106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 7344325 - 7344456
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| ||||||||||||||||||||| ||||||| | ||| ||||   ||||||| ||| ||||||||| ||||| | |    
T  7344325 acttctacggtacaccacataaattgaggtgtaccggtactcctactccaaaaatttataatttaaggattatttt-atgaaataaagagttatttatcg 7344423  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||| |||||| |||||    
T  7344424 atatttatattttagaaaatatcattttataag 7344456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 21970713 - 21970578
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| |  |||||  ||||||||||||||| ||||||  |||||| |||||||||  | | ||||||| |||||| || ||||||    
T  21970713 gggaacttctacggtacactcataaattctggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagttatttg 21970614  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||||||||| ||||| ||||||||||||    
T  21970613 tcggcatttatattttacaaaatatcatttcataag 21970578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 10887808 - 10887944
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||| | ||| |||||  ||| ||||||  ||||||||| ||||    
T  10887808 tgggaacttctacggtacacctcataaattgaggtgtaccggtactcctacttcaaaaatttataatttaacgatta-ttttataaaataaagagttatt 10887906  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||||||||||| ||||| | |||| |||||    
T  10887907 tatcaatatttatattttaaaaaatattattttataag 10887944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 29023619 - 29023750
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| || ||||| |||||||||||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  29023619 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 29023718  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | |  ||||||||||| |||||| | ||||||    
T  29023719 tcggcatttatattttggaaaatatgatttca 29023750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 31644410 - 31644541
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| || ||||| ||||||| |||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  31644410 gggaacttctacggtacactcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacaatcaattttatgaaataaatagttatttg 31644509  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | |  |||||||||||||||||| | ||||||    
T  31644510 tcggcatttatattttagaaaatatgatttca 31644541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 10091887 - 10091771
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||||||||||   |||||| ||||||||||||| |||| |||| |||||  |||||||||  | ||||||||| ||||||| | ||||| ||||      
T  10091887 ttctacggtacacctttaaattatggtgtaccggtacacctatttcataaatcaataaattaacgataatttttatgtaataaagtgatatttattgact 10091788  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  10091787 tttatattttagaaaat 10091771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 19474081 - 19473962
Alignment:
Q  397 tttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| | ||||||| || || || |||||  ||| ||||||| ||||||||| ||    
T  19474081 tttgggaacttctacggtacacctcacaaattgaggtgtaccggtactcttgcttcaaatattttcaatttaacaatta-ttttatgaaataaagagtta 19473983  T
Q  496 tttgttgatatttatatttta 516  Q
    ||| |  ||||||||||||||    
T  19473982 tttatcaatatttatatttta 19473962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 1706013 - 1705896
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| |  ||||| |||||||||||||||||| ||||||| || | ||| |||||  ||| ||||||| ||||||||| ||||    
T  1706013 tgggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgatta-ttttatgaaataaagagttatt 1705915  T
Q  498 tgttgatatttatatttta 516  Q
    | |  ||||||||||||||    
T  1705914 tatcaatatttatatttta 1705896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 2259310 - 2259266
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  2259310 gggaacttctacggtacacccgcaaattaaggtgtacaggtactc 2259266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 3861063 - 3860946
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctctt 206  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||| ||    |||  |||||| |||| |||||| |  |||||| ||||     
T  3861063 taaaaaattaatttagttataattatattatatgacatataaattacagatatttat----atagattaactgattatcaaaaatggatcaattactcta 3860968  T
Q  207 ggtcatgaattcaaattttggt 228  Q
    | ||||||||| ||||||||||    
T  3860967 gatcatgaatttaaattttggt 3860946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 4509835 - 4509720
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||  |  |||||||| |||||| ||||||||     
T  4509835 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatattttttatgtaataaatagctattt- 4509737  T
Q  500 ttgatatttatatttta 516  Q
    |  ||||||||||||||    
T  4509736 tcaatatttatatttta 4509720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 6848920 - 6848876
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  6848920 gggaacttctacggtacacccgtaaattaaggtgtaccggtactc 6848876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 2603974 - 2603870
Alignment:
Q  55 caacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatattatatgacatataaattata 154  Q
    |||||||||||||||||||| ||| || |||||||| ||       | |||||||| ||||||||| |||||||||||||||||| ||| |||||||| |    
T  2603974 caacccaagcaagggctttaagcctcaaaattttgggtgaaaaaa-gacctctaaataattaatttggttataagtatattatataacagataaattaca 2603876  T
Q  155 gacatt 160  Q
    ||||||    
T  2603875 gacatt 2603870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 228
Target Start/End: Original strand, 24585077 - 24585262
Alignment:
Q  37 gccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatatta 136  Q
    ||||| ||||||||||||||| |||||||  || ||||||||  | |||||||| ||        ||||||||||||||||| | |||||||||||||||    
T  24585077 gccggtctaagggccaagcaatccaagcagaggttttaggccttaaaattttgggtgaaaaaaatgcctctaaaaaattaatctagttataagtatatta 24585176  T
Q  137 tatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggt 228  Q
    ||||| | |||||||| |      ||||| |||| | ||||| |||| |||||| |  | || | ||||||||||||||||||| |||||||    
T  24585177 tatgagagataaattaca------aatttacataacataactaattaacaaaaatgctttaactactcttggtcatgaattcaagttttggt 24585262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 10966030 - 10965972
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaat 457  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||    
T  10966030 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaaaat 10965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 409 - 535
Target Start/End: Original strand, 33610710 - 33610836
Alignment:
Q  409 tacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatattt 508  Q
    ||||||||||||  ||| |||| ||||||||||| |||| || | |||||  ||  ||||   ||||||||||| ||||||||| || |||||||  |||    
T  33610710 tacggtacacccttaaactaagatgtaccggtacacctattttataaatcaatatgttaatgattatttttatgtaataaagagataattgttgactttt 33610809  T
Q  509 atattttagaaaatgtcatttcataag 535  Q
    |||||||||||||| | ||||||||||    
T  33610810 atattttagaaaatattatttcataag 33610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 2198182 - 2198053
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||| |||||||   ||||||||||||||||||||  ||| |||| |||||  ||| ||||   | ||||||||| || |||||||||||| | ||      
T  2198182 ttctactgtacacctttaaattaaggtgtaccggtacatctatttcataaatcaataagttaaagatcatttttatgtaacaaagagctatttatcgact 2198083  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  2198082 tttatattttagaaaatattatttcataag 2198053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 18772266 - 18772149
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | | ||||| |||||||||||||||| || | | |||||||||  | | |||||||| || ||| | ||||||    
T  18772266 gggaacttctacggtacactcacaaagtgaagtgtatcggtactcctacttcataattttataaattaacgatcattttttatgaaagaaataactattt 18772167  T
Q  499 gttgatatttatatttta 516  Q
    ||| ||||||||||||||    
T  18772166 gttaatatttatatttta 18772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 32716003 - 32715874
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  ||||||||||||||| |||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | | | | ||      
T  32716003 ttctacggtacacccttaaattaaggtgtaccagtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 32715904  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||| ||||||||||||    
T  32715903 tttatattttaaaaaatatcatttcataag 32715874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 535
Target Start/End: Complemental strand, 16893308 - 16893170
Alignment:
Q  396 ttttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagct 494  Q
    ||||| ||||||||| |||||||| | |||||| ||||||||||||||||  |||||| |||| | ||||||||| | |  ||||||  |||||| || |    
T  16893308 ttttgagaacttctatggtacacctcacaaattgaggtgtaccggtactctcacttcataaatttataaattaac-gattgttttattaaataaataggt 16893210  T
Q  495 atttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||  ||| |||||||||||||||  ||||||||||||    
T  16893209 atttgtcaata-ttatattttagaaaacatcatttcataag 16893170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 515
Target Start/End: Complemental strand, 33574759 - 33574643
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||  | | |||||||| |||||| ||||||||    
T  33574759 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 33574660  T
Q  499 gttgatatttatatttt 515  Q
     |  |||||||||||||    
T  33574659 ttcaatatttatatttt 33574643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 515
Target Start/End: Complemental strand, 33574937 - 33574821
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||  | | |||||||| |||||| ||||||||    
T  33574937 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 33574838  T
Q  499 gttgatatttatatttt 515  Q
     |  |||||||||||||    
T  33574837 ttcaatatttatatttt 33574821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 516
Target Start/End: Complemental strand, 14508029 - 14507911
Alignment:
Q  398 ttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||||||||||||||||| |  ||||| |||||||||||||||||| ||||||| || ||  |||| | || |  ||||||| ||||||||| |||    
T  14508029 ttgggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatat-ttgcaatttaatgattattttatgaaataaagagttat 14507931  T
Q  497 ttgttgatatttatatttta 516  Q
    || |  ||||||||||||||    
T  14507930 ttatcaatatttatatttta 14507911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 8401413 - 8401458
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||    
T  8401413 tgggaatttctacggtacacccgcaaattacggtgtaccgctactc 8401458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 534
Target Start/End: Original strand, 18667689 - 18667824
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||| || |||||  ||||||||||||||| || |||  |||||| |||||||||  | | |||||||  ||||| || ||||| |     
T  18667689 gaacttctacggtacactcgtaaattgtggtgtaccggtactcttaattcctaaatctataaattaacgatcaattttatgagataaatagttatttatc 18667788  T
Q  502 g---atatttatattttagaaaatgtcatttcataa 534  Q
    |   | |||||||||||||||||| |||||| ||||    
T  18667789 ggcaacatttatattttagaaaatatcattttataa 18667824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 24249212 - 24249096
Alignment:
Q  400 gggaacttctacggtacacccg-caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||||   |||||| ||||||| |||||||||| ||||||| || |  || |||||  ||||||| ||| ||||||||| |||||    
T  24249212 gggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttattt 24249114  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  24249113 atcaatatttatatttta 24249096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 535
Target Start/End: Original strand, 32430227 - 32430316
Alignment:
Q  446 tacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| |||||  |||||||||  ||||||||||| |||||  || ||||||| ||  ||| ||||||||||||| ||||||||||||    
T  32430227 tacttcataaatcaataaattaacaattatttttatgaaataataagttatttgtcgagttttgtattttagaaaatatcatttcataag 32430316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 3861135 - 3861095
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttagg 76  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  3861135 ggccggcctaagggccaagcaacccaaacaagggttttagg 3861095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 17546009 - 17545965
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||  |||||||||||||||||||||||| |||||||    
T  17546009 gggaacttctatagtacacccgcaaattaaggtgtactggtactc 17545965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 32833774 - 32833818
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||    
T  32833774 gggaacttctacggtacatccgcaaattacggtgtactggtactc 32833818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 23416903 - 23416852
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||| ||||    
T  23416903 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttc 23416852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 522
Target Start/End: Original strand, 4979100 - 4979221
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||||  | |||||||||||||| |||| |  || |||| |||| | ||||||||   | | ||||||| |||||| || |||||     
T  4979100 gggaacttctacggtacact-gtaaattaaggtgtactggtatttttatttcataaatttataaattaatgatcaattttatgaaataaatagttattta 4979198  T
Q  500 ttgatatttatattttagaaaat 522  Q
    | | |||||||||||||||||||    
T  4979199 tcggtatttatattttagaaaat 4979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 531
Target Start/End: Complemental strand, 6094056 - 6093926
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||| ||||||||||||| || |||| ||| |||| |||||||| |  |||| |||||| |||| ||||  | | ||||||| |||||| || |||||||    
T  6094056 ggaatttctacggtacactcgtaaatcaagatgtatcggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatttgt 6093957  T
Q  501 tgatatttatattttagaaaatgtcatttca 531  Q
     |  |||||||| ||||||||| | ||||||    
T  6093956 cggcatttatatcttagaaaatatgatttca 6093926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 535
Target Start/End: Complemental strand, 9687180 - 9687046
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||| | |||| | ||||||| || ||||| | ||||  || | | |||||||||  | | |||||||| |||||| | |||||| |    
T  9687180 gaacttctacggtacactcacaaaatgaggtgtatcgatactctttcttcttaattttataaattaacgatcattttttatgaaataaataactatttat 9687081  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
      |||||||||||||| ||||| ||||||||||||    
T  9687080 caatatttatattttataaaatatcatttcataag 9687046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 15494246 - 15494288
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggcc 78  Q
    |||||||||||||||||||| ||| |||| |||||||||||||    
T  15494246 ggccggcctaagggccaagccaccaaagcgagggctttaggcc 15494288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 529
Target Start/End: Complemental strand, 1096618 - 1096493
Alignment:
Q  404 acttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttga 503  Q
    ||||||| |||||||||| |||||| |||||||||||||||   |||  ||  | | |||||||||| | |||||||||    ||| || | ||||||||    
T  1096618 acttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactataatttttatgaggaaaataggtgtttgttga 1096519  T
Q  504 tatttatattttagaaaatgtcattt 529  Q
     || ||||||||||||||| ||||||    
T  1096518 catatatattttagaaaatatcattt 1096493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 21294196 - 21294080
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||| |||||||||||| |  ||||| |||||||||||||||||| ||||||| || |  ||  ||||  ||| ||||||| ||||||||| |||||    
T  21294196 gggaactcctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatatttacaatgtaacgatta-ttttatgaaataaagagttattt 21294098  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  21294097 atcaatatttatatttta 21294080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 521
Target Start/End: Complemental strand, 26315819 - 26315735
Alignment:
Q  436 ccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||||||| |||||||||||| | ||| |||||  ||||||| ||| ||||||||| ||||| |  |||||| ||||||||||||    
T  26315819 ccggtactcttacttcaaaaatttataatttaacgattatttt-atgaaataaagagttatttatcaatatttgtattttagaaaa 26315735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 1371805 - 1371686
Alignment:
Q  397 tttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||| |||||||||| || ||| | |||||| ||||||| |||||||||| ||||||| || |  || |||||  ||||||| ||| ||||||||| ||    
T  1371805 tttggaaacttctacgatatacctcacaaattgaggtgtatcggtactcctccttcaaatatttacaatttaacgattatttt-atgaaataaagagtta 1371707  T
Q  496 tttgttgatatttatatttta 516  Q
    ||| |  ||||||||||||||    
T  1371706 tttatcaatatttatatttta 1371686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 1379553 - 1379434
Alignment:
Q  397 tttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||| |||||||||| || ||| | |||||| ||||||| |||||||||| ||||||| || |  || |||||  ||||||| ||| ||||||||| ||    
T  1379553 tttggaaacttctacgatatacctcacaaattgaggtgtatcggtactcctccttcaaatatttacaatttaacgattatttt-atgaaataaagagtta 1379455  T
Q  496 tttgttgatatttatatttta 516  Q
    ||| |  ||||||||||||||    
T  1379454 tttatcaatatttatatttta 1379434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 469
Target Start/End: Original strand, 11763174 - 11763242
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaac 469  Q
    |||||||||||||||||| | || | | |||||||||||||||||| ||||| || | | |||||||||    
T  11763174 ggaacttctacggtacactcacagagtgaggtgtaccggtactcctgcttcataattttataaattaac 11763242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 452
Target Start/End: Complemental strand, 23069106 - 23069054
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca 452  Q
    |||||||| |||||||||| | |||| | |||||||||||||||||| |||||    
T  23069106 gggaacttttacggtacactcacaaagtgaggtgtaccggtactcctgcttca 23069054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 535
Target Start/End: Complemental strand, 26958721 - 26958661
Alignment:
Q  475 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||| ||||||||||  |||||||||||||| | ||  ||||||||||||    
T  26958721 tttttatgtaataaatagctatttgtcaatatttatattttatagaacatcatttcataag 26958661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 126)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 396 - 535
Target Start/End: Original strand, 26010938 - 26011077
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  26010938 ttttaggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaaactttaaattaactattatttttatggaataaagagcta 26011037  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  26011038 tttgttgatatttatattttagaaaatgtcattttataag 26011077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 51977859 - 51977993
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  51977859 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagttatttgt 51977958  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||| |||||||||||| |||||||||||||||||    
T  51977959 tgatgtttatattttaggaaatgtcatttcataag 51977993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 33910097 - 33909961
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  33910097 tgggaatttctacggtacacccacaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattgtttttatggaataaagagctattt 33909998  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33909997 gttgatatttatattttagaaaatgtcattttataag 33909961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 396 - 535
Target Start/End: Complemental strand, 35910573 - 35910434
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||    
T  35910573 ttttgggaacttctacggtacacccgtaaattaaagtgtatcggtactcctacttcaaaaatctttaaattaactattatttttatagaataaagagtta 35910474  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  35910473 tttgttgatatttatattttagaaaatgtcattttataag 35910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 397 - 535
Target Start/End: Original strand, 632645 - 632783
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    ||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||  |||||||||||| ||||||||||||||||||||| |||    
T  632645 tttgggaacttctacggcacacccgcaaattaaggtgaaccgatacttctacttcaaaaaattttaaattaactattatttttatggaataaagagttat 632744  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||||||||||||||||||    
T  632745 ttgttgatatttatattttagaaaatgtcatttcataag 632783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 33098706 - 33098840
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||||||||||||||||||| |||||||||||||| | ||| || ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  33098706 ggaacttctacggtacacccacaaattaaggtgtatcagtattcatactttaaaaatctttaaattaactattatttttatggaataaagaactatttgt 33098805  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||| |||||||||||||    
T  33098806 tgatatttatattttagaaaaagtcatttcataag 33098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 413 - 535
Target Start/End: Original strand, 42316848 - 42316970
Alignment:
Q  413 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  42316848 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaaataactattatttttatggaataaagtgctatttgttgatatttttat 42316947  T
Q  513 tttagaaaatgtcatttcataag 535  Q
    |||  ||||||||||||||||||    
T  42316948 ttttaaaaatgtcatttcataag 42316970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 404 - 531
Target Start/End: Original strand, 10178876 - 10179003
Alignment:
Q  404 acttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttga 503  Q
    |||| ||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  10178876 acttatacggtacacttgcaaattaaggtgtatcggtactcctactttaaaaatctttaaattaactattatttttatggaataaagaggtatttgttga 10178975  T
Q  504 tatttatattttagaaaatgtcatttca 531  Q
    ||||||||||||||||||| ||||||||    
T  10178976 tatttatattttagaaaatatcatttca 10179003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 50239277 - 50239412
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| |  |||||     
T  50239277 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaaaatattta 50239376  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| ||||| ||||||||||||    
T  50239377 ttgatatttatattttaaaaaatatcatttcataag 50239412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 40777901 - 40778079
Alignment:
Q  46 agggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatattatatgacata 145  Q
    |||||||||||||||||||||| ||||||||||||| |||||| | ||       |||||||||||| ||||||| |||||||||||||||||||||| |    
T  40777901 agggccaagcaacccaagcaagagctttaggccacaaaattttaggtgaaaaaaaggcctctaaaaatttaatttggttataagtatattatatgacaga 40778000  T
Q  146 taaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggt 228  Q
    ||||||||||| ||| ||    |||  |||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  40778001 taaattatagatatttat----atagtttaactgattaccaaaaaagtctcaattacacttgatcatgaattcaaattttggt 40778079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 36 - 249
Target Start/End: Original strand, 3167301 - 3167506
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnn-ggcctctaaaaaattaattttgttataagtatat 134  Q
    |||||||||||||||||||||||||||||||||| ||||||  || ||||||||| ||        |||||||||||||||||||| |||||||||||||    
T  3167301 ggccggcctaagggccaagcaacccaagcaagggttttagg--actcaattttgggtgacaaaaaaggcctctaaaaaattaatttggttataagtatat 3167398  T
Q  135 tatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctc 234  Q
    |||| |||| |||||||||    ||  ||||||||| ||||||| ||||||||||| |  |||||| ||||| |||||||||||||||||   |||||||    
T  3167399 tataagacagataaattat----atatatttgcatagcttaactgattaccaaaaaggcatcaattactcttagtcatgaattcaaattt---tggtctc 3167491  T
Q  235 cacaaaattgatttt 249  Q
    |||||||||||||||    
T  3167492 cacaaaattgatttt 3167506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 402 - 532
Target Start/End: Complemental strand, 2247449 - 2247319
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||||| ||||||||||||||||||||||   |||| |||||||| || ||||||| | ||||||||| ||||||||||||||||||    
T  2247449 gaacttctacggtacacccacaaattaaggtgtaccggtactttaactttaaaaatctatatattaactatcatttttatgaaataaagagctatttgtt 2247350  T
Q  502 gatatttatattttagaaaatgtcatttcat 532  Q
    ||||||| ||||||||||||| |||||||||    
T  2247349 gatatttgtattttagaaaatatcatttcat 2247319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 437 - 534
Target Start/End: Original strand, 36274754 - 36274851
Alignment:
Q  437 cggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36274754 cggtactcatacttaaaaaatctttaaattaactattagttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 36274851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 427 - 532
Target Start/End: Original strand, 48616474 - 48616581
Alignment:
Q  427 taaggtgtaccggtact--cctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgt 524  Q
    |||||||||| ||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48616474 taaggtgtactggtactttcctacttcaaaaatctttaaattaattattatttttatggaataaagagctatttgttgatatttgtattttagaaaatgt 48616573  T
Q  525 catttcat 532  Q
    ||||||||    
T  48616574 catttcat 48616581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 28791390 - 28791501
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||| || || || ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  28791390 aaattaaagtatatcgatactcctacttcaaaaatctttaaattaactattatttttatagaataaagagttatttgttgatatttatattttagaaaat 28791489  T
Q  523 gtcatttcataa 534  Q
    ||||||| ||||    
T  28791490 gtcattttataa 28791501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 413 - 535
Target Start/End: Complemental strand, 23304800 - 23304679
Alignment:
Q  413 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatat 512  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||| | |||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  23304800 gtacacccgtaaattaagatgtaccggtactcttacttcaaaaatttataaattaactattatttttatgaaataaa-agctatttgttgatatttatat 23304702  T
Q  513 tttagaaaatgtcatttcataag 535  Q
    |||||||||| |||||| |||||    
T  23304701 tttagaaaatatcatttaataag 23304679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 2621085 - 2620945
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgta-----ccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagct 494  Q
    |||||||||||||||||||| |||||||||||||||      ||||||||| |||| |||||  |||||||||||  |||||||||||||||||||| ||    
T  2621085 gggaacttctacggtacacctgcaaattaaggtgtatcggtacggtactcccactttaaaaaaatttaaattaacaattatttttatggaataaagaact 2620986  T
Q  495 atttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||||||| | |||| |||||    
T  2620985 atttgttgatatttatattttagaaaattttattttataag 2620945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 534
Target Start/End: Complemental strand, 7122362 - 7122227
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||| |||||||| ||| |||| |||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| || |||||    
T  7122362 tgggaacttctacagtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttattt 7122263  T
Q  499 gttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||| || ||||||||||||| |||||| ||||    
T  7122262 gttgatacttgtattttagaaaatatcattttataa 7122227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 438 - 535
Target Start/End: Complemental strand, 52261181 - 52261084
Alignment:
Q  438 ggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| | ||||||||||||||||||||||| ||||||| || || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  52261181 ggtactcatgcttcaaaaatctttaaattaactattattttaatagattaaagagttatttgttgatatttatattttagaaaatgtcatttcataag 52261084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 38 - 276
Target Start/End: Original strand, 4941612 - 4941843
Alignment:
Q  38 ccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnn-ggcctctaaaaaattaattttgttataagtatatta 136  Q
    |||| |||||||||||||||||||| |||||| |||||||| || |||||||| ||        |||||||||||||||||||| || |||| |||||||    
T  4941612 ccggtctaagggccaagcaacccaaacaagggttttaggcctcaaaattttgggtgaaaaaaaaggcctctaaaaaattaatttggtcataattatatta 4941711  T
Q  137 tatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctcca 236  Q
    ||||||| ||||||||||||     ||||| ||| ||||||| ||||| ||||| |  ||||||  ||||||||||||||||||||||   | |||||||    
T  4941712 tatgacaaataaattataga----tatttgaatagcttaactgattacaaaaaatgcatcaattattcttggtcatgaattcaaattt---tagtctcca 4941804  T
Q  237 caaaattgatttttatttaaatattctgtcgaagaaaata 276  Q
    || |||||| |||||| ||| |||||||| ||| ||||||    
T  4941805 cacaattga-ttttatataactattctgttgaaaaaaata 4941843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 101 - 249
Target Start/End: Original strand, 46149931 - 46150072
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    |||||||||||||||||||| ||||||| |||||||||| ||| ||||||||  |||    ||||||||| ||||||| |||||||||||   |||||||    
T  46149931 ggcctctaaaaaattaatttggttataaatatattatataacaaataaattactgac----atttgcataacttaactgattaccaaaaagacctcaatt 46150026  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
     || ||||||||||||||||||||   ||||||||||||||||||||||    
T  46150027 acttttggtcatgaattcaaattt---tggtctccacaaaattgatttt 46150072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 12179008 - 12178871
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||| | ||||  |||||| |||||||||  ||| ||||||| |||||| || |||    
T  12179008 tttgggaacttttacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttat 12178909  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||  || |||||||||||||||||| | |||||||||    
T  12178908 ttgccgacatttatattttagaaaatattatttcataa 12178871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 13269483 - 13269270
Alignment:
Q  41 gcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatattatatg 140  Q
    |||||||||||||| |||| |||| ||| ||||| | | || |||||||| ||       | |||||||||||||||||| ||| |||||||||||||||    
T  13269483 gcctaagggccaagaaacctaagcgaggactttatgtctcaaaattttgggtgaaaaaaagtcctctaaaaaattaatttggttgtaagtatattatatg 13269384  T
Q  141 acatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctccacaaa 240  Q
    ||| ||||||||    |||  ||||| ||||||||||| ||||||||||| | ||| ||| ||||| |||||||||||||||||   | ||||||||| |    
T  13269383 acagataaatta----catatatttgtatatcttaactgattaccaaaaatgcctctattactcttcgtcatgaattcaaattt---ttgtctccacaca 13269291  T
Q  241 attgatttttatttaaatattc 262  Q
    ||||| |||||| |||||||||    
T  13269290 attga-ttttatataaatattc 13269270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 512
Target Start/End: Complemental strand, 51184445 - 51184333
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||| ||||||||| ||| ||||||||| ||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| || ||||||    
T  51184445 gggaacttctatggtacacccacaatttaaggtgtgccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatttg 51184346  T
Q  500 ttgatatttatat 512  Q
    ||||||| |||||    
T  51184345 ttgatatatatat 51184333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 21486108 - 21485886
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnn-ggcctctaaaaaattaattttgttataagtatat 134  Q
    |||||| ||||||| |||||||| |||| |||||||||||||| || ||||||||  |        |||||||||||||||||||| |||||| | ||||    
T  21486108 ggccggtctaagggtcaagcaactcaagtaagggctttaggcctcaaaattttgggcggaaaaaaaggcctctaaaaaattaatttggttatacggatat 21486009  T
Q  135 tatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctc 234  Q
    ||| ||| | |||||||||||||    ||||||||| ||||||| |||||| |||| |||| ||||   |||| |||||||||||| |||   |||||||    
T  21486008 tatgtgatagataaattatagac----atttgcataacttaactgattacctaaaatgtctgaatttgccttgatcatgaattcaagttt---tggtctc 21485916  T
Q  235 cacaaaattgatttttatttaaatattctgt 265  Q
    || |||||||| |||||| ||||||||||||    
T  21485915 cataaaattga-ttttatataaatattctgt 21485886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 434 - 535
Target Start/End: Complemental strand, 27353218 - 27353117
Alignment:
Q  434 taccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 533  Q
    ||||||||||| ||||| |||||||| |||||||||| ||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | |||| |||    
T  27353218 taccggtactcttactttaaaaatctataaattaactattatttttataaaataaagagctatttattgatatttgtattttagaaaatataattttata 27353119  T
Q  534 ag 535  Q
    ||    
T  27353118 ag 27353117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 389 - 532
Target Start/End: Original strand, 11778629 - 11778768
Alignment:
Q  389 gttaacattttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataa 488  Q
    ||||| |||| |||||||| ||||||||||    || |||||||||| || ||||| |||||||||||| | |||||||||| | ||||||||| |||||    
T  11778629 gttaaaatttagggaacttttacggtacac----aatttaaggtgtatcgatactcttacttcaaaaatttataaattaactatcatttttatgaaataa 11778724  T
Q  489 agagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    | || |||| |||||||||| ||||||| ||||| |||||||||    
T  11778725 aaagttattcgttgatatttttattttaaaaaatatcatttcat 11778768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 26423845 - 26423976
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||||||| | ||| ||||   ||| ||||||| ||||||||| ||||  | |    
T  26423845 acttctacggtacacctcataaattaaggtgtaccggtactcctacttcaaaaatttataatttaataatta-ttttatgaaataaagagttattcatcg 26423943  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||  |||||| |||||    
T  26423944 atatttatattttagaaaacatcattttataag 26423976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 11444277 - 11444406
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||| ||||||||||| |||| |||| |||||  ||| ||||   ||||||||||| |||||| || ||||||||||      
T  11444277 ttctacggtacacccttaaattaagatgtaccggtacacctatttcataaatcaataagttaatgattatttttatgtaataaatagatatttgttgact 11444376  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | |||| |||||    
T  11444377 tttatattttagaaaatattattttataag 11444406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 531
Target Start/End: Complemental strand, 30548014 - 30547885
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||| || ||||| |||||||| ||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || |||||||     
T  30548014 gaacttctacggtacactcgtaaattgaggtgtacaggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtc 30547915  T
Q  502 gatatttatattttagaaaatgtcatttca 531  Q
    || |||||||||||||||||| | ||||||    
T  30547914 gacatttatattttagaaaatatgatttca 30547885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 522
Target Start/End: Complemental strand, 24511985 - 24511863
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||| ||||||||||||| || ||||| |||||||||||||||| | ||||| |||| | |||| ||||  | | ||||||| |||||| || ||||||    
T  24511985 gggaatttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatttataaactaacgatcaattttatgaaataaatagttatttg 24511886  T
Q  500 ttgatatttatattttagaaaat 522  Q
    |||  ||||||||||||||||||    
T  24511885 ttggcatttatattttagaaaat 24511863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 521
Target Start/End: Complemental strand, 43146828 - 43146708
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||| ||||||||||||||||  |||||| |||||||| |||||||||||||||||||| | ||| |||||  ||| ||||||| ||||||||| ||||     
T  43146828 tggggacttctacggtacacct-caaattgaggtgtactggtactcctacttcaaaaatttataatttaacgatta-ttttatgaaataaagagttattc 43146731  T
Q  499 gttgatatttatattttagaaaa 521  Q
     |  |||||||||||||||||||    
T  43146730 atcaatatttatattttagaaaa 43146708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 8221883 - 8221698
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatg-nnnnnnnggcctctaaaaaattaattttgttataagtatat 134  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||| | ||          |||||  ||||||||||| |||||||||||||    
T  8221883 ggccggcctaagggccaagcaacccaagcaagtgctttaggcctcaaaattttaggtgaaaaacaaaacctct--aaaattaatttggttataagtatat 8221786  T
Q  135 tatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggt 228  Q
    ||||||||| ||||| || ||||    ||||||| | |||| || ||||||||||| |  |||||| |||| ||||  ||||||||||||||||    
T  8221785 tatatgacagataaagtacagac----atttgcacaacttacctgattaccaaaaaggcatcaattactctcggtc--gaattcaaattttggt 8221698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 26921682 - 26921811
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  ||| |||| ||||||||||| |||| |||| |||||  ||  ||||   |||| |||||| ||||||||| ||||||||||      
T  26921682 ttctacggtacacccttaaactaagatgtaccggtacacctatttcataaatcaatacgttaatgattatctttatgtaataaagagatatttgttgact 26921781  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  26921782 tttatattttagaaaatattatttcataag 26921811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 9588050 - 9587914
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttat-ttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| |  ||| | |||| ||||||||||||| ||||| || | | ||||||||   |||| ||||||| |||||| ||||||||    
T  9588050 gggaacttctacggtacactcataaagtgaggtataccggtactcctgcttcataattttataaattaatgattatcttttatgaaataaatagctattt 9587951  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||| |||||||||||||| | ||  ||||||||||||    
T  9587950 gttaatatttatattttacagaacatcatttcataag 9587914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 23061408 - 23061364
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23061408 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 23061364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 51004790 - 51004926
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||||| | ||| ||||  | |  ||||||  ||||||||| |||||    
T  51004790 gggaatttctacggtacacctcacaaattgaggtgtaccggtactcctacttcaaaaatttataatttaaacgattattttataaaataaagagttattt 51004889  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |  |||||||||||||| ||||  |||||| |||||    
T  51004890 ataaatatttatattttataaaacatcattttataag 51004926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 34100713 - 34100844
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||| |||||||  | ||||| |||||||||||||||  | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  34100713 gggaacttctatggtacacttgtaaattgaggtgtaccggtactattgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 34100812  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | || |||||||||||||||||| | ||||||    
T  34100813 tcgacatttatattttagaaaatatgatttca 34100844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 37499151 - 37499104
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  37499151 tttgggaacttctatggtacacccgcaaattaaggtgtaccggtactc 37499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 41550148 - 41550283
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctt-taaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||| ||||||| |  |||||   |||||||||||||| |  |||| ||| ||| |||||||||  ||||||||||| |||||| || ||||||    
T  41550148 ggaacttctatggtacactcagaaattttagtgtaccggtactcttgtttcacaaaacttataaattaacgattatttttatgaaataaaaagttatttg 41550247  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    |  ||||||||||||||||||| ||||| |||||||    
T  41550248 tcaatatttatattttagaaaacgtcatatcataag 41550283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 517
Target Start/End: Original strand, 41541501 - 41541595
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttag 517  Q
    ||||| |||||||||||||||| | ||||| |||| | | |||||||  | ||||||||| |||||||||||||||||  |||||||||||||||    
T  41541501 aaattgaggtgtaccggtactcttgcttcataaatttatgaattaacgatcatttttatgaaataaagagctatttgtcaatatttatattttag 41541595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 413 - 535
Target Start/End: Complemental strand, 42647789 - 42647667
Alignment:
Q  413 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatat 512  Q
    ||||||||  |||||||||||||||||||| |||  |||| |||||  ||| |||| | | ||||||||| || ||||||||| |||| ||  |||||||    
T  42647789 gtacacccttaaattaaggtgtaccggtacacctgtttcataaatcaataagttaaatatcatttttatgtaacaaagagctacttgtcgacttttatat 42647690  T
Q  513 tttagaaaatgtcatttcataag 535  Q
    |||||||||| | ||||||||||    
T  42647689 tttagaaaatattatttcataag 42647667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 409 - 535
Target Start/End: Complemental strand, 48796426 - 48796300
Alignment:
Q  409 tacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatattt 508  Q
    |||||||||| || ||| | |||||||||||||||| | | ||  |||||| ||||||||   | | ||||||| |||||| || ||||||| || ||||    
T  48796426 tacggtacactcgtaaaatgaggtgtaccggtactcttccatcccaaatctataaattaatgatcaattttatgaaataaatagttatttgtcgacattt 48796327  T
Q  509 atattttagaaaatgtcatttcataag 535  Q
    |||||||||||||| ||||||||||||    
T  48796326 atattttagaaaatatcatttcataag 48796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 532
Target Start/End: Complemental strand, 2665579 - 2665467
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagc--tatttgttgatatttatattttagaa 519  Q
    ||||||||||||||||  | ||| |||||| ||||| | |||||||||  | ||||||||| ||||||||||  ||||||| || |||||||| ||||||    
T  2665579 caaattaaggtgtaccaatgctcttacttccaaaatatataaattaacgatcatttttatgaaataaagagctatatttgtcgacatttatatcttagaa 2665480  T
Q  520 aatgtcatttcat 532  Q
    ||| |||||||||    
T  2665479 aatatcatttcat 2665467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 535
Target Start/End: Complemental strand, 12979962 - 12979853
Alignment:
Q  426 ttaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtc 525  Q
    ||||| ||||||||||| |||| |||| |||||  ||| ||||   ||||||||||| ||||||||| ||||||||||  |||||||||| |||||| |     
T  12979962 ttaagatgtaccggtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatattttggaaaatatt 12979863  T
Q  526 atttcataag 535  Q
    ||||||||||    
T  12979862 atttcataag 12979853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 534
Target Start/End: Complemental strand, 18992743 - 18992622
Alignment:
Q  413 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatat 512  Q
    |||||| ||||| ||||||||||   ||| || || || |||||| | |||||||||| | ||||||||  ||||| ||| |||||| || |||||||||    
T  18992743 gtacactcgcaagttaaggtgtattagtattcttattttaaaaatttataaattaactatcatttttataaaataaggagttatttgctggtatttatat 18992644  T
Q  513 tttagaaaatgtcatttcataa 534  Q
    |||||||||| |||||||||||    
T  18992643 tttagaaaatatcatttcataa 18992622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 514
Target Start/End: Original strand, 34038163 - 34038276
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||  | | |||||||| |||||| || |||||||    
T  34038163 gaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgt 34038262  T
Q  501 tgatatttatattt 514  Q
    | ||||||||||||    
T  34038263 taatatttatattt 34038276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 43916346 - 43916462
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| |||||    
T  43916346 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttattt 43916444  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  43916445 atccatatttatatttta 43916462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 20280628 - 20280492
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctt-taaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||    |||||   |||||||||||||| |  |||| ||| ||| |||||||||  | ||||||||| |||||| || |||||    
T  20280628 gggaacttctacggtacactaagaaattttagtgtaccggtactcttgtttcacaaaacttataaattaacaatcatttttatgaaataaaaagttattt 20280529  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  ||||||||||||||||||| ||||| |||||||    
T  20280528 gtcaatatttatattttagaaaacgtcatatcataag 20280492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 23057107 - 23057067
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggt 440  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23057107 gggaacttctacggtacacccgcaaattaaggtgtaccggt 23057067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 51879047 - 51879099
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaatttt 88  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  51879047 ggccggcctaagggccaagccacccaagcaagggctttaggcctcaaaatttt 51879099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 520
Target Start/End: Original strand, 20487642 - 20487689
Alignment:
Q  473 tatttttatggaataaagagctatttgttgatatttatattttagaaa 520  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  20487642 tatttttatgaaataaagagttatttgttgatatttatattttagaaa 20487689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 535
Target Start/End: Complemental strand, 28494167 - 28494041
Alignment:
Q  409 tacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgttgatatt 507  Q
    |||||||||||||||||||||||||||||||||||| | ||| | |  | | |||||||||| | | |||||||| || ||| || | |||||||| ||     
T  28494167 tacggtacacccgcaaattaaggtgtaccggtactcttgctt-acatttttataaattaactatcattttttatgaaagaaataggtgtttgttgacata 28494069  T
Q  508 tatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||| |||||| |||||    
T  28494068 tatattttagaaaatatcattttataag 28494041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 535
Target Start/End: Complemental strand, 51369726 - 51369587
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaa-taaagagcta 495  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||   |||  ||  | | |||||||||| ||| |||||||| ||  ||| || |     
T  51369726 ttgggaacttttacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactattattttttatgaaagaaaataggtg 51369627  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| || ||||||||||||||| |||||| |||||    
T  51369626 tttgttgacatatatattttagaaaatatcattttataag 51369587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 516
Target Start/End: Original strand, 12105155 - 12105277
Alignment:
Q  395 attttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagc 493  Q
    |||| ||||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||  | | |||||||| |||||| ||     
T  12105155 atttagggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatgtaataaatagt 12105254  T
Q  494 tatttgttgatatttatatttta 516  Q
    |||||||  ||||||||||||||    
T  12105255 tatttgtcaatatttatatttta 12105277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 532
Target Start/End: Complemental strand, 44979276 - 44979147
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctac-ttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    |||||||||||||||| |  |||||||||||||| ||||||||||| || |||||| | ||| |||||  ||| ||||||| ||||||||| ||||  |     
T  44979276 acttctacggtacacctcataaattaaggtgtactggtactcctactttaaaaaatttataatttaacgatta-ttttatgaaataaagagttattcatc 44979178  T
Q  502 gatatttatattttagaaaatgtcatttcat 532  Q
     |||||||||||||||||||  |||||||||    
T  44979177 aatatttatattttagaaaacatcatttcat 44979147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 46641924 - 46641806
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| |||||| | |||||||||||||||||| ||||  || | | ||||| |||  | | |||||||| | |||| |||||||    
T  46641924 tgggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaatagctatt 46641825  T
Q  498 tgttgatatttatatttta 516  Q
    |||  ||||||||||||||    
T  46641824 tgtcaatatttatatttta 46641806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 47718868 - 47718946
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    |||||||||||||| ||||||| || || |||||||| |||||||| | | || |||||| ||||||||||||||||||    
T  47718868 aaattaaggtgtactggtactcttattttaaaaatctataaattaattatcatctttatgaaataaagagctatttgtt 47718946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 485 - 535
Target Start/End: Original strand, 47718962 - 47719012
Alignment:
Q  485 ataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  47718962 ataaagagctatttattgatatttatattttaaaaaatatcatttcataag 47719012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 40054994 - 40054878
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||  ||||||||| |||||    
T  40054994 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttataaaataaagagttattt 40054896  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  40054895 atcaatatttatatttta 40054878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 45427133 - 45427261
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||| ||||||||  ||| |||| ||||||||||| |||| |||| |||||  ||  || | || | |||||||| ||||||||| ||||||||||      
T  45427133 ttctactgtacacccttaaactaagatgtaccggtacacctatttcataaatcaatacgttga-tgatttttttatgtaataaagagatatttgttgact 45427231  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  45427232 tttatattttagaaaatattatttcataag 45427261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 921842 - 921886
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||    
T  921842 gggaacttctatggtacacctgcaaattaaggtgtaccggtactc 921886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 5956526 - 5956570
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  5956526 gggaacttctacggtacacccacaaattaagctgtaccggtactc 5956570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 6519987 - 6520030
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  6519987 gggaacttctacggtacacc-gcaaattaaggtgtaccggtactc 6520030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 23288601 - 23288722
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    ||||||||||||||||||||  |||||| |||||||||||| | |||||||| ||||    || | |||| | ||| | ||||| |||||   |||||||    
T  23288601 ggcctctaaaaaattaatttaattataaatatattatatgatagataaattacagac----atctccataacataattgattactaaaaagaactcaatt 23288696  T
Q  201 gctcttggtcatgaattcaaattttg 226  Q
     |||||| ||||||||||||||||||    
T  23288697 actcttgatcatgaattcaaattttg 23288722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 32144668 - 32144804
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||| ||||||| |  ||||||||||||| ||||| |||| |||| ||||| | || ||||||  | |  |||||| |||||| || |||||    
T  32144668 tgggaacttctatggtacactcataaattaaggtgtatcggtattcctgcttccaaaatttatatattaacaatcaactttatgaaataaatagttattt 32144767  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    || |  |||||||| | ||||||| ||||||||||||    
T  32144768 gtcggcatttatatctcagaaaatatcatttcataag 32144804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 535
Target Start/End: Original strand, 32912207 - 32912345
Alignment:
Q  396 ttttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagct 494  Q
    |||||||||||||||| ||||||| | |||||| ||||||| ||||||||  |||||| |||| | |||||||||  | ||||| | | |||||| ||||    
T  32912207 ttttgggaacttctacagtacacctcacaaattgaggtgtatcggtactctcacttcataaatttataaattaacgatcattttaa-gaaataaatagct 32912305  T
Q  495 atttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||  | ||| |||||||||||||  ||||||||||||    
T  32912306 atttgtcaacatt-atattttagaaaacatcatttcataag 32912345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 35305558 - 35305514
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  35305558 gggaacttctacggtacactcgtaaattaaggtgtaccggtactc 35305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 51985341 - 51985297
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  51985341 gggaacttctacggtacacctgcaaattacggtgtaccggtactc 51985297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 472 - 535
Target Start/End: Complemental strand, 2090161 - 2090099
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||||||||||||| || | |||| ||||||| ||||||||||||||||||    
T  2090161 ttatttttatgaaataaagagctattt-ttcaaatttttattttataaaatgtcatttcataag 2090099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 8461528 - 8461571
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||| ||||||||||||||||| |||||||||||||||    
T  8461528 ggaacttctatggtacacccgcaaattacggtgtaccggtactc 8461571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 461 - 532
Target Start/End: Original strand, 28094840 - 28094911
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    |||||||||  ||||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| ||||    
T  28094840 taaattaacgattatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcat 28094911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 516
Target Start/End: Original strand, 30320888 - 30321007
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctat 496  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||||||| ||||  || | | ||||| |||  | | |||||||| |||||| ||||||    
T  30320888 ttgggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaatagctat 30320987  T
Q  497 ttgttgatatttatatttta 516  Q
    || |  ||||||||||||||    
T  30320988 ttatcaatatttatatttta 30321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 31571056 - 31571107
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  |||||||||||||||||||||||||||||||||    
T  31571056 aataaaaaggtatttgtcaatatttatattttagaaaatgtcatttcataag 31571107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 535
Target Start/End: Original strand, 9222856 - 9222990
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||||| ||||||| | ||| ||   |||||||||||||| |  |||| ||||| | |||||||||  ||| ||| ||| |||||| || |||||||    
T  9222856 gaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatttataaattaacgattactttaatgaaataaaaaggtatttgt 9222955  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
      |||||||||||||||||||  ||||||||||||    
T  9222956 caatatttatattttagaaaacatcatttcataag 9222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 535
Target Start/End: Original strand, 33234116 - 33234190
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  33234116 taaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 33234190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 535
Target Start/End: Original strand, 33771708 - 33771782
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  33771708 taaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 33771782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 528
Target Start/End: Original strand, 39627834 - 39627956
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||| ||||||||   ||||||||||||||  ||| |||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| | ||      
T  39627834 ttctactgtacacccttcaattaaggtgtaccaatacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 39627933  T
Q  506 tttatattttagaaaatgtcatt 528  Q
    ||||||||||||||||| |||||    
T  39627934 tttatattttagaaaatatcatt 39627956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 535
Target Start/End: Original strand, 48752121 - 48752183
Alignment:
Q  473 tatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||| ||||||||  |||||||  |||||||| ||||||||||| ||||||||||||    
T  48752121 tatttttatgaaataaagaaatatttgtcaatatttatgttttagaaaatatcatttcataag 48752183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 521
Target Start/End: Original strand, 49982456 - 49982577
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| |  ||||| |||||||||| ||||||| ||  | |||| | |||||||||  | ||||| ||| |||||  ||||||||    
T  49982456 gggaacttctacggtacacctcataaattgaggtgtaccgatactcctgctatataaatttataaattaacaatcatttt-atgaaataagtagctattt 49982554  T
Q  499 gttgatatttatattttagaaaa 521  Q
    ||  |||||||||||||||||||    
T  49982555 gtcaatatttatattttagaaaa 49982577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 1845073 - 1845189
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||||| ||||||| |  |  || |||||  ||| ||||||| ||||||||| |||||    
T  1845073 gggaacttctacggtgcacctcacaaattgaggtgtaccggtactcctgcttcaaatacttacaatttaacgatta-ttttatgaaataaagagttattt 1845171  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  1845172 atcaatatttatatttta 1845189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 6079618 - 6079715
Alignment:
Q  425 attaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||||||||| |||| |||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| |  || |||||||||||||||||    
T  6079618 attaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcaatctttatattttagaaaat 6079715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 7426659 - 7426796
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| |  || ||   |||||||||||||| |  |||| ||||| | |||||||| | | | ||| ||| |||||| || ||||    
T  7426659 tgggaacttctacggtacactcataattttgagtgtaccggtactcttctttcacaaaatatataaattaaatatcactttaatgaaataaaaaggtatt 7426758  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  |||||||||||||||||||  ||||||||||||    
T  7426759 tgtcaatatttatattttagaaaacatcatttcataag 7426796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 24230569 - 24230686
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||  ||||||||| ||||| || | | |||||||||  | | |||||||| |||||| ||||||||    
T  24230569 gggaacttctacggtacactcacaaagtgaggtgtaatggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctattt 24230668  T
Q  499 gttgatatttatatttta 516  Q
    ||  | ||||||||||||    
T  24230669 gtcaaaatttatatttta 24230686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 431 - 535
Target Start/End: Complemental strand, 29171541 - 29171436
Alignment:
Q  431 gtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 529  Q
    |||||||||||||| |  |||| ||||| | |||||||||  | | ||| ||| |||||| || |||||||| |||||||||||||||||||  ||||||    
T  29171541 gtgtaccggtactcttgtttcacaaaatttataaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcattt 29171442  T
Q  530 cataag 535  Q
    ||||||    
T  29171441 cataag 29171436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 31821567 - 31821688
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagct 494  Q
    ||||||||||||||||||||||| | |||| | ||||||| |||||||||| ||||  || | | ||||| |||  | | |||||||| | |||| ||||    
T  31821567 ttttgggaacttctacggtacactcacaaaatgaggtgtagcggtactcctgcttcttaattttataaatgaacgatcattttttatgtattaaatagct 31821666  T
Q  495 atttgttgatatttatatttta 516  Q
    ||||||  ||||||||||||||    
T  31821667 atttgtcaatatttatatttta 31821688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 36672329 - 36672200
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||| |||||||   |||||||||||||| ||||  ||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| | ||      
T  36672329 ttctacgttacacccttcaattaaggtgtaccagtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 36672230  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | || |||||||    
T  36672229 tttatattttagaaaatattatctcataag 36672200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 521
Target Start/End: Original strand, 42958841 - 42958962
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||| ||||| | ||||| || ||||| || ||||||||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  42958841 gggaatttctatgatacactcgtaaattgagatgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 42958940  T
Q  500 ttgatatttatattttagaaaa 521  Q
    | |  |||||||||||||||||    
T  42958941 tcggcatttatattttagaaaa 42958962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 534
Target Start/End: Original strand, 9176736 - 9176832
Alignment:
Q  438 ggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||| || || |||||| | |||||||||| | |||||||   ||||||||||||||||| | ||||||||  | ||||||| |||||||||||    
T  9176736 ggtactcttattttaaaaatttataaattaactatcatttttacaaaataaagagctatttgtggctatttataagtcagaaaatatcatttcataa 9176832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 23539942 - 23540077
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||| | ||  |||||  | |||||||||    ||| | ||| |||||| ||||||||    
T  23539942 gggaacttctacggtacacctcagaaattgaggtgtaccggtactcttgctctaaaaaattataaattaacgaccattct-atgaaataaaaagctattt 23540040  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||| ||  |||||||||||||||  ||||||||||||    
T  23540041 gttaatgcttatattttagaaaacatcatttcataag 23540077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 24646997 - 24646945
Alignment:
Q  108 aaaaaattaattttgttataagtatattatatgacatataaattatagacatt 160  Q
    |||||||| |||| ||||||| ||||| |||||||| ||||||||||||||||    
T  24646997 aaaaaattgatttggttataaatatataatatgacaaataaattatagacatt 24646945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 38261209 - 38261074
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| |  ||| | |||||||||||||||||| |||| | ||| ||  |||||||  | | |||||||| |||||| ||||||||    
T  38261209 gggaacttctacggtacactcataaagtgaggtgtaccggtactcctgcttc-ataattttataattaacgatcattttttatgtaataaatagctattt 38261111  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  | |||||||||||| | ||| |||| |||||||    
T  38261110 gtcaacatttatattttatagaatatcatctcataag 38261074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 44647320 - 44647380
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||| ||| |||||| || |||||||| |||||||||||||||||||  |||||||||||    
T  44647320 attttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcatttcataa 44647380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 45650417 - 45650298
Alignment:
Q  397 tttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||||||||||||||||| ||| | |||||| || ||||||||||||||  ||||||| || |  || |||||  ||||||| ||| ||||||||| ||    
T  45650417 tttgggaacttctacggtatacctcacaaattgagatgtaccggtactccagcttcaaatatttacaatttaacgattatttt-atgaaataaagagtta 45650319  T
Q  496 tttgttgatatttatatttta 516  Q
    ||| |  ||||||||||||||    
T  45650318 tttatcaatatttatatttta 45650298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 514
Target Start/End: Original strand, 14152685 - 14152803
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaac--tgttatttttatggaataaagagcta 495  Q
    |||||||||||||||||| || | |||| |||||| ||||||||||| | ||| | || | | |||||||||  |  | |||||||| |||||| |||||    
T  14152685 ttgggaacttctacggtatactcacaaaataaggtataccggtactcttgcttaataattttataaattaacaataatttttttatgtaataaatagcta 14152784  T
Q  496 tttgttgatatttatattt 514  Q
    |||||  ||||||||||||    
T  14152785 tttgtcaatatttatattt 14152803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 25081758 - 25081889
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||| || |||||| || ||||| |||||||| ||||||| |  |||| |||||| |||| ||||  | | ||||||| |||||| |  ||||||    
T  25081758 gggaacttccacagtacactcgtaaattgaggtgtactggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaataattatttg 25081857  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | |  |||||||||||||||||| | ||||||    
T  25081858 tcggcatttatattttagaaaatatgatttca 25081889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 532
Target Start/End: Original strand, 29451076 - 29451147
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    |||||||||  ||||||||||  |||||||| |||||||| ||| ||||| ||||||||||| | |||||||    
T  29451076 taaattaacaattatttttataaaataaagaactatttgtcgatttttatcttttagaaaatataatttcat 29451147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 31890156 - 31890207
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||| ||||||| |||||| |||||||||||||| ||||||| ||||    
T  31890156 aataaagagatatttgtggatattaatattttagaaaatatcatttcgtaag 31890207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 44264063 - 44263928
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    |||||| |||||||||||| | |||| | ||||||||||||||||||  |||| || | | |||||||||  | | |||||||| |||||| |||| |||    
T  44264063 gggaacatctacggtacactcacaaagtgaggtgtaccggtactcctgtttcataattttataaattaacgatcattttttatgtaataaatagctcttt 44263964  T
Q  499 gttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||  ||| |||||||||| | ||  |||||||||||    
T  44263963 gtcaatagttatattttatagaacatcatttcataa 44263928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 535
Target Start/End: Complemental strand, 46918756 - 46918655
Alignment:
Q  432 tgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 531  Q
    ||||||||||||| | ||||| |||| | |||||||||  | ||||| ||| ||||| |||||||||||  |||||||||||||||||||  ||| ||||    
T  46918756 tgtaccggtactcttgcttcataaatttataaattaacgatcatttt-atgaaataa-gagctatttgtcaatatttatattttagaaaacatcacttca 46918659  T
Q  532 taag 535  Q
    ||||    
T  46918658 taag 46918655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 51610535 - 51610669
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||  || ||||| ||||||| |||||||| | ||||| |||| | |||| ||||  | | ||||||| |||||| || |||||    
T  51610535 tgggaacttctacggtacattcgtaaattgaggtgtatcggtactcttgcttcataaatttataaactaacaatcaattttatgaaataaatagttattt 51610634  T
Q  499 gttg--atatttatattttagaaaatgtcatttca 531  Q
    || |  || | ||||||||||||||| | ||||||    
T  51610635 gtcggcatttatatattttagaaaatatgatttca 51610669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 516
Target Start/End: Complemental strand, 52180637 - 52180522
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgt 500  Q
    ||||||||| |||| || | |||| | |||||||||||||||||| ||||| || | | |||||||||  | | |||||||| |||||| ||||||||||    
T  52180637 gaacttctatggtatactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgt 52180538  T
Q  501 tgatatttatatttta 516  Q
      | ||||||||||||    
T  52180537 caaaatttatatttta 52180522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 453
Target Start/End: Complemental strand, 7435920 - 7435866
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaa 453  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||||| ||||||    
T  7435920 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcctccttcaa 7435866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 529
Target Start/End: Complemental strand, 18642271 - 18642145
Alignment:
Q  404 acttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgttg 502  Q
    ||||||| |||||||||| |||||| |||||||||||||||   |||  ||  | | |||||||||| | | |||||||| || ||| || | |||||||    
T  18642271 acttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaaaaaataggtgtttgttg 18642172  T
Q  503 atatttatattttagaaaatgtcattt 529  Q
    | || ||||||||||||||| ||||||    
T  18642171 acatatatattttagaaaatatcattt 18642145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 22821593 - 22821519
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  ||||||||||| |||||| |  |||||||  |||||||||||||| ||||  ||||||||||||    
T  22821593 taaattaacgattatttttatgaaataaaaaattatttgtcaatatttatattttaaaaaacatcatttcataag 22821519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 25702433 - 25702479
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||| |  ||||| ||||||||||||||||    
T  25702433 ttgggaacttctacggtacactcataaattgaggtgtaccggtactc 25702479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 516
Target Start/End: Original strand, 31530306 - 31530424
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    ||||||||||||| ||||||   |||| | |||||||| ||||||||| ||||| || | | |||||||||  | | |||||||| |||||| | |||||    
T  31530306 tgggaacttctaccgtacacttacaaaatgaggtgtactggtactcctgcttcataattttataaattaacgataattttttatgtaataaataactatt 31530405  T
Q  498 tgttgatatttatatttta 516  Q
    ||||  |||||||||||||    
T  31530406 tgttattatttatatttta 31530424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 44808812 - 44808695
Alignment:
Q  399 tgggaacttctacggtaca-cccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||| | | |||||| |||||||||| ||||||| ||||||| || | ||| |||||  ||| ||||||  ||||||||  ||||    
T  44808812 tgggaacttctacggtacatctcacaaattgaggtgtaccgatactcctgcttcaaatatttataatttaacgatta-ttttataaaataaagaattatt 44808714  T
Q  498 tgttgatatttatatttta 516  Q
    | |  ||||||||||||||    
T  44808713 tatccatatttatatttta 44808695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 535
Target Start/End: Complemental strand, 51991908 - 51991803
Alignment:
Q  429 aggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 528  Q
    |||||||||||||||||| ||||||| || |  || |||||  ||||||| ||| ||||||||| ||||| |  |||||||||||||| ||||| | |||    
T  51991908 aggtgtaccggtactcctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttatttatccatatttatattttataaaatattatt 51991810  T
Q  529 tcataag 535  Q
    | |||||    
T  51991809 ttataag 51991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 10408702 - 10408649
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca 452  Q
    |||||||||||||||||||| | |||| | ||||||||||||||| || |||||    
T  10408702 tgggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttca 10408649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 35873936 - 35874053
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | || |||||||||||| || ||||| || | | |||||||||  | | |||||||| |||||| | ||||||    
T  35873936 gggaacttctacggtacactcacaaagtgagatgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaataactattt 35874035  T
Q  499 gttgatatttatatttta 516  Q
    ||  | ||||||||||||    
T  35874036 gtcaaaatttatatttta 35874053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 37765328 - 37765389
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  37765328 attttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 37765389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 535
Target Start/End: Original strand, 42275338 - 42275471
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttattttt-atggaataaagagctatttgtt 501  Q
    |||||||| ||||||| |  ||| | |||||||||||||||| | ||||| || | | |||||||||  | |||||| ||| |||||| || ||||||||    
T  42275338 aacttctaaggtacactcagaaagtgaggtgtaccggtactcatgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgtt 42275437  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
     ||||| |||||||| | ||  ||||||||||||    
T  42275438 aatattaatattttatagaacatcatttcataag 42275471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 45885890 - 45885935
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaatta 152  Q
    ||||||||||||||  |||||| |||||||||||||| ||||||||    
T  45885890 taaaaaattaatttgcttataaatatattatatgacaaataaatta 45885935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 516
Target Start/End: Complemental strand, 47693601 - 47693491
Alignment:
Q  404 acttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttga 503  Q
    ||||||| ||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||  | |||||  || |||||| ||||||||||  |    
T  47693601 acttctatggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataatttt--tgtaataaatagctatttgtcaa 47693504  T
Q  504 tatttatatttta 516  Q
    |||||||||||||    
T  47693503 tatttatatttta 47693491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 535
Target Start/End: Complemental strand, 49739506 - 49739401
Alignment:
Q  431 gtgtaccggtactcctacttcaaaaatctt-taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 529  Q
    |||||||||||||| |  |||| ||| ||| |||||||||  | ||||||||  |||||| |  |||||||  ||||||||||||||||||| ||||| |    
T  49739506 gtgtaccggtactcttgtttcacaaaacttataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaacgtcatat 49739407  T
Q  530 cataag 535  Q
    ||||||    
T  49739406 cataag 49739401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 535
Target Start/End: Original strand, 6329324 - 6329384
Alignment:
Q  475 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||| ||||||||||  |||||||||||||| | ||  ||||||||||||    
T  6329324 tttttatgtaataaatagctatttgtcaatatttatattttatagaacatcatttcataag 6329384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 535
Target Start/End: Original strand, 9259848 - 9259952
Alignment:
Q  432 tgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 530  Q
    ||||||||||||| |  |||| ||||| | |||||||||  | | ||| ||| |||||| || |||||||  |||||||||||||||||||  |||||||    
T  9259848 tgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttc 9259947  T
Q  531 ataag 535  Q
    |||||    
T  9259948 ataag 9259952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 535
Target Start/End: Complemental strand, 17525820 - 17525708
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||||||||| |||||||||| ||||  |||| | || ||||||  | | ||||||| |||||| || ||||||| |  |||||||| | | |||||    
T  17525820 aaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatctcaaaaaat 17525721  T
Q  523 gtcatttcataag 535  Q
     ||||||||||||    
T  17525720 atcatttcataag 17525708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 31216553 - 31216477
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatg 482  Q
    |||||||||||||||   |||||||||||||| |||| |||| |||| |||||| ||| |||||  | |||||||||    
T  31216553 ttctacggtacacccttcaattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatg 31216477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 476 - 532
Target Start/End: Complemental strand, 38862492 - 38862436
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    ||||||| |||||| || |||||||  |||||||||||||||||||  |||||||||    
T  38862492 ttttatgaaataaaaagttatttgtcaatatttatattttagaaaacatcatttcat 38862436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 444
Target Start/End: Original strand, 39971273 - 39971313
Alignment:
Q  404 acttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||| |||||||||| |||||| |||||||||||||||    
T  39971273 acttctatggtacacccgtaaattacggtgtaccggtactc 39971313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 40850428 - 40850292
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||| ||||||| | ||| ||   ||||||||||| || |  |||| ||||| | |||||||||  | | ||| ||| |||||| || |||||    
T  40850428 gggaacttctatggtacactcacaattttgagtgtaccggtattcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtattt 40850329  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||||||||  ||||||||||||    
T  40850328 gtcaatatttatattttagaaaacatcatttcataag 40850292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #124
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 48976875 - 48977011
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    |||||||||||||| |||| | |||| | ||||||| |||||||||| ||||| || | | |||||||||  | | |||||||| |||||| | |||| |    
T  48976875 gggaacttctacggcacactcacaaagtgaggtgtatcggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatct 48976974  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |  |||||||||||||| | ||  ||||||||||||    
T  48976975 atcaatatttatattttatagaacatcatttcataag 48977011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #125
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 50631593 - 50631728
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||  | |||||| ||||| ||||||| |||| || || |||| | |||||||||  | ||||| ||| |||||| ||||||      
T  50631593 gggaacttctacggtacacatcacaaattgaggtgcaccggtaatcctgctccataaatgtataaattaacattcatttt-atgaaataaaaagctatcc 50631691  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||   || |||||||||||||||  ||||||||||||    
T  50631692 gtcattaattatattttagaaaacttcatttcataag 50631728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #126
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 52345599 - 52345643
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||    
T  52345599 gggaacttctacggtacactcacaaagtgaggtgtaccggtactc 52345643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 4e-61; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 43750481 - 43750346
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  43750481 gggaacttctacgggacacctgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctattta 43750382  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||||||||    
T  43750381 ttgatatttatattttagaaaatgtcatttcataag 43750346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 20438822 - 20438951
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20438822 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctatttgttgata 20438921  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| |||||||||||| |||||    
T  20438922 tttatattttaaaaaatgtcattttataag 20438951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 18990494 - 18990359
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  || |||||| |||||||||||||||||    
T  18990494 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctactttaaaaatctttaaattaactagtacttttatagaataaagagctatttg 18990395  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||| |||||||||||| ||||    
T  18990394 ttgatatttatattttaggaaatgtcatttcttaag 18990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 34118876 - 34118741
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||  |||||||||||| ||||||||||||||||||| ||||||||    
T  34118876 gggaacttctacggtacacccgcaaattaaggtgtactggtactcttatttcaaaaaaatttaaattaactattatttttatggaataaagtgctatttg 34118777  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||||||||    
T  34118776 ttgatatttatattttagaaaatgtcatttcataag 34118741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 30936094 - 30936229
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| | | ||||||| |||||| |||||||||    
T  30936094 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctatttg 30936193  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30936194 ttgatatttatattttagaaaatatcatttcataag 30936229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 45857475 - 45857610
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| ||| ||||||| |||||| |||||||||    
T  45857475 gggaacttttacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattacttttatgaaataaaaagctatttg 45857574  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||| |||||| |||||    
T  45857575 ttgatatttatattttagaaaatatcatttaataag 45857610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 30317595 - 30317465
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatc-tttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||||| |||||   |||||||||||  |||||||||||||||||||||||||||    
T  30317595 gggaatttctacggtacacctgcaaattaaggtgtatcggtactcctactttaaaaaaaatttaaattaacaattatttttatggaataaagagctattt 30317496  T
Q  499 gttgatatttatattttagaaaatgtcattt 529  Q
    |||||||||||||||||||||||||| ||||    
T  30317495 gttgatatttatattttagaaaatgttattt 30317465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 46836584 - 46836718
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||||||||||| |||||| |||||||||| |||| || |||| ||||||||||||  |||||||||||| |||||||||| |||||||| ||||||| |    
T  46836584 ggaacttctacgatacacctgcaaattaagatgtatcgatacttctacttcaaaaaattttaaattaactattatttttatagaataaagtgctatttat 46836683  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||| ||||||||||||||||||    
T  46836684 tgatatttatattttaaaaaatgtcatttcataag 46836718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 8770369 - 8770505
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||| | |||||||||||| |||||||||| | ||||||||| ||||||||| | |||    
T  8770369 tgggatcttatacggtacacccgcaaattaaggtgtaccgatactcttgcttcaaaaatctataaattaactatcatttttatgaaataaagagttgttt 8770468  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||| ||||||||||||| ||||| ||||||    
T  8770469 gttgatatttgtattttagaaaatatcattacataag 8770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 398 - 534
Target Start/End: Original strand, 44963821 - 44963957
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| || ||||    
T  44963821 ttgggaacttctatggtacacccacaatttaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatt 44963920  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||| ||||||||||||| |||||| ||||    
T  44963921 tgttgatatttgtattttagaaaatatcattttataa 44963957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 36 - 249
Target Start/End: Complemental strand, 7739010 - 7738804
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatatt 135  Q
    ||||| |||||||||||||||| | |||||||||||||| ||| || |||||||| ||        ||||||||||||| ||||| ||||||| ||||||    
T  7739010 ggccgacctaagggccaagcaatcaaagcaagggctttaagcctcaaaattttgggtgaaaaaaaagcctctaaaaaatcaatttggttataaatatatt 7738911  T
Q  136 atatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctcc 235  Q
    |||||||| |||||||| |||||||    |||||| ||||||| ||||| |||||   ||||||| |||||||||||||||||||||||   |||| |||    
T  7738910 atatgacagataaattacagacatt----tgcatagcttaactgattacgaaaaagacctcaattactcttggtcatgaattcaaattt---tggtttcc 7738818  T
Q  236 acaaaattgatttt 249  Q
    ||||||||||||||    
T  7738817 acaaaattgatttt 7738804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 423 - 535
Target Start/End: Complemental strand, 11486378 - 11486266
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| |  |||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  11486378 aaattaaggtgtaccggtactcttacttcaaaaatctataaattaactatcttttttatgaaataaagagctatttattgatatttgtattttagaaaat 11486279  T
Q  523 gtcatttcataag 535  Q
     ||||||||||||    
T  11486278 atcatttcataag 11486266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 42975301 - 42975166
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||  ||||| ||| |||||||||||||||| || |  |||||||||||| | |||||||||| ||||||||||| |||||| | |||||||    
T  42975301 gggaacttctattgtacatccgtaaattaaggtgtaccgatatttttacttcaaaaatttataaattaactattatttttatgaaataaaaaactatttg 42975202  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42975201 ttgatatttatattttagaaaatatcatttcataag 42975166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 403 - 514
Target Start/End: Complemental strand, 48946472 - 48946361
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||||| ||||||||| |||| |||||| ||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||| |||    
T  48946472 aacttctacggtacaccctcaaattaagatgtatcggtacccctactttaaaaatctttaaattaattattatttttatgaaataaagagctattttttg 48946373  T
Q  503 atatttatattt 514  Q
    ||||||||||||    
T  48946372 atatttatattt 48946361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 535
Target Start/End: Complemental strand, 31482777 - 31482643
Alignment:
Q  402 gaacttctacggtacacccgcaaa-ttaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||||||||| |||| | ||| |||||||||| ||| |||  || || |||||||| |||||||||| ||||||||||| |||||||||||||||      
T  31482777 gaacttctacggtgcaccagtaaaattaaggtgtatcggcacttttattttaaaaatctataaattaactattatttttatgaaataaagagctatttca 31482678  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| ||||||||||||| ||||||||||||    
T  31482677 tgatatttgtattttagaaaatatcatttcataag 31482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 428 - 534
Target Start/End: Complemental strand, 41809577 - 41809471
Alignment:
Q  428 aaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcat 527  Q
    |||||||| | |||||  |||||||||||||| |||||||||| | | ||||||| ||||||||  ||||||||||||||||||||||||||||| ||||    
T  41809577 aaggtgtatcagtactgatacttcaaaaatctataaattaactatcaattttatgaaataaagaattatttgttgatatttatattttagaaaatatcat 41809478  T
Q  528 ttcataa 534  Q
    |||||||    
T  41809477 ttcataa 41809471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 2746845 - 2746727
Alignment:
Q  104 ctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgct 203  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| ||||      ||||||||| ||||| | |||| |||||| || |||||||||    
T  2746845 ctctaaaaaattaattttgttataagtatattatatgatagataaatcatag----gtatttgcataacttaattgattatcaaaaatgtttcaattgct 2746750  T
Q  204 cttggtcatgaattcaaattttg 226  Q
    |||| ||||||||||||||||||    
T  2746749 cttgatcatgaattcaaattttg 2746727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 24203267 - 24203138
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||| ||||| ||||| |||| |||| |||||  ||||||||   ||||||||||| ||||||||| ||||||||||      
T  24203267 ttctacggtacacccttaaattaagatgtactggtacacctatttcataaatcaataaattaatgattatttttatgtaataaagagatatttgttgact 24203168  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  24203167 tttatattttagaaaatattatttcataag 24203138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 265
Target Start/End: Complemental strand, 35759276 - 35759123
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaattatag-acattaatttgcatatcttaacttattaccaaaaaagtctcaattgctct 205  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||| | ||  |||||||||||||| ||  |||  ||||||||||||||| ||||    
T  35759276 taaaaaattaatttagttataagtatattatatgatagataaattatagtagat--atttgcatatcttagctgtttatgaaaaaagtctcaattactct 35759179  T
Q  206 tggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatattctgt 265  Q
    |   |||||||||||||||   ||||||||||  |||||| |||||| ||||||||||||    
T  35759178 tcagcatgaattcaaattt---tggtctccacggaattga-ttttatataaatattctgt 35759123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 400 - 498
Target Start/End: Complemental strand, 43069514 - 43069416
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | || ||||| |||| |||||||| |||||||||||||| | |||||||| | ||||||||| ||| |||||||||||    
T  43069514 gggaacttctacggtacacctgtaagttaagatgtatcggtactcttacttcaaaaatctattaattaactatcatttttatgaaattaagagctattt 43069416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 31743708 - 31743573
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | ||||||  ||||||||||||||||| |||||||||| | ||| |||||  ||| ||||||| ||||||||| |||||    
T  31743708 gggaacttctacggtacacctcacaaattgtggtgtaccggtactcctgcttcaaaaatttataatttaacgatta-ttttatgaaataaagagttattt 31743610  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |  |||||||||||||| ||||  |||||| |||||    
T  31743609 ataaatatttatattttataaaacatcattttataag 31743573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 43631055 - 43631186
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  43631055 gggaacttctatggtacactcgtagattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 43631154  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | || |||||||||||||||||| | ||||||    
T  43631155 tcgacatttatattttagaaaatatgatttca 43631186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 24504521 - 24504381
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    ||||||||| ||| |||||| |||||||||||||||||||||| |||| |||||||      |||||||| ||||  | ||||||||||||   ||||||    
T  24504521 ggcctctaacaaactaatttggttataagtatattatatgacaaataagttataga----tgtttgcataacttagttgattaccaaaaaaacatcaatt 24504426  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
      |||| |||||||||||||||||   ||||||||||||||||||||||    
T  24504425 attctt-gtcatgaattcaaattt---tggtctccacaaaattgatttt 24504381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 37118340 - 37118469
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| ||  |||||||||||||||| ||| |||| |||| |||||  |||||||||  | ||||||||| ||||||||  ||||| | ||      
T  37118340 ttctacggtacatccataaattaaggtgtaccgatacacctatttcataaatcaataaattaacgatcatttttatgtaataaagaaatatttatcgact 37118439  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  37118440 tttatattttagaaaatattatttcataag 37118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 535
Target Start/End: Complemental strand, 1343423 - 1343292
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| || |||||||||||||||||| ||||||| | ||| ||||   ||||||| ||| ||||||||| ||||| | |    
T  1343423 acttctacggtacaccacataaattgagatgtaccggtactcctactccaaaaatttataatttaaggattatttt-atgaaataaagagttatttatcg 1343325  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||  |||||| |||||    
T  1343324 atatttatattttagaaaacatcattttataag 1343292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 535
Target Start/End: Complemental strand, 15877469 - 15877345
Alignment:
Q  411 cggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttat 510  Q
    ||||||||||  |||||||||||||||||||| |||  |||| ||||   ||| |||||  | ||||||||| || |||||||||||||||||  |||||    
T  15877469 cggtacacccttaaattaaggtgtaccggtacacctgtttcataaattaataagttaacgatcatttttatgtaaaaaagagctatttgttgacttttat 15877370  T
Q  511 attttagaaaatgtcatttcataag 535  Q
    |||||| ||||| | ||||||||||    
T  15877369 attttataaaatattatttcataag 15877345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 43069399 - 43069348
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  43069399 aataaagagctatttgttgatatttgtattttagaaaatatcatttcataag 43069348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 535
Target Start/End: Complemental strand, 2291189 - 2291051
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    ||||||| |||||||||||||| || ||| | |||||||||||||||| | | ||  |||| | ||||||||   | | ||||||| |||||| || |||    
T  2291189 tttgggagcttctacggtacactcgtaaaatgaggtgtaccggtactctttcatcccaaatttataaattaatgatcaattttatgaaataaatagttat 2291090  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||| | ||||||||||||||||||| | ||||||||||    
T  2291089 ttgtcggtatttatattttagaaaatattatttcataag 2291051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 521
Target Start/End: Complemental strand, 13806743 - 13806646
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||| ||||||||| ||||||||||||||||||| | ||| |||||  ||| ||||||| ||||||||| ||||| |  |||||||||||||||||||    
T  13806743 aaattgaggtgtaccagtactcctacttcaaaaatttataatttaacgatta-ttttatgaaataaagagttatttatcaatatttatattttagaaaa 13806646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 27956693 - 27956647
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  27956693 ttgggaacttctatggtacacccgcaaattaaggtgtaccggtactc 27956647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 21919688 - 21919804
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| |||||    
T  21919688 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttattt 21919786  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  21919787 atcaatatttatatttta 21919804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 23182390 - 23182506
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| |||||    
T  23182390 gggaacttctacggtacacctcacaaattaaggtgtactggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttattt 23182488  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  23182489 atcaatatttatatttta 23182506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 444
Target Start/End: Complemental strand, 42711336 - 42711291
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  42711336 tgggaacttctacggtacatccgcaaattaaggtgtaccggtactc 42711291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 41913096 - 41913140
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  41913096 gggaacttctatggtacacccgcaaattaaggtgtaccggtactc 41913140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 406 - 534
Target Start/End: Original strand, 45704507 - 45704635
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||||||||||||||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | | | | ||      
T  45704507 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 45704606  T
Q  506 tttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||| ||||| |||||||||||    
T  45704607 tttatattttaaaaaatatcatttcataa 45704635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 516
Target Start/End: Complemental strand, 5215436 - 5215315
Alignment:
Q  395 attttgggaacttctacggtacac-ccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagc 493  Q
    ||||||||||||||||||||||||  | |||||| |||||||||||||||||| ||| ||| || |  || |||||  ||| ||||||| |||||||||     
T  5215436 attttgggaacttctacggtacacatcacaaattgaggtgtaccggtactcctgctttaaatatttacaatttaacgatta-ttttatgaaataaagagt 5215338  T
Q  494 tatttgttgatatttatatttta 516  Q
    ||||| |  ||||||||||||||    
T  5215337 tatttatcaatatttatatttta 5215315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 429 - 531
Target Start/End: Original strand, 16086975 - 16087077
Alignment:
Q  429 aggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 528  Q
    |||||||||||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||| || |||||||||||||||||| | |||    
T  16086975 aggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcgacatttatattttagaaaatatgatt 16087074  T
Q  529 tca 531  Q
    |||    
T  16087075 tca 16087077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 433 - 535
Target Start/End: Complemental strand, 23561478 - 23561376
Alignment:
Q  433 gtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    |||||||||||| | ||||| |||||| |||||||||  | | ||||||| |||||| || ||||||| |  ||| |||||||||||||| |||||||||    
T  23561478 gtaccggtactcgtgcttcataaatctataaattaacgatcaattttatgaaataaatagttatttgtaggcattgatattttagaaaatatcatttcat 23561379  T
Q  533 aag 535  Q
    |||    
T  23561378 aag 23561376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 424 - 522
Target Start/End: Complemental strand, 30819831 - 30819733
Alignment:
Q  424 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||| |||||||||||  ||| |||| |||||  ||| ||||   ||||||||||| ||||||||| ||||||||||  |||||||||||||||||    
T  30819831 aattaagatgtaccggtacatctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatattttagaaaat 30819733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 35291322 - 35291443
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagct 494  Q
    |||| |||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||  ||| |||||||| |||||| | ||    
T  35291322 tttttggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgattattttttatgaaataaataact 35291421  T
Q  495 atttgttgatatttatatttta 516  Q
    |||| |  ||||||||||||||    
T  35291422 atttatcaatatttatatttta 35291443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 39925801 - 39925930
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| ||  |||||||||||||||||||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | | | | ||      
T  39925801 ttctacggtacatccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 39925900  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||| ||||||||||||    
T  39925901 tttatattttaaaaaatatcatttcataag 39925930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 28327473 - 28327433
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggt 440  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  28327473 gggaacttctacggtacacccgcaaattaagctgtaccggt 28327433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 516
Target Start/End: Original strand, 48460248 - 48460367
Alignment:
Q  397 tttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||||||||||||| |||||||| | |||||| |||| ||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| ||    
T  48460248 tttgggaacttctatggtacacctcacaaattgaggtataccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagtta 48460346  T
Q  496 tttgttgatatttatatttta 516  Q
    ||| |  ||||||||||||||    
T  48460347 tttatcaatatttatatttta 48460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 474 - 532
Target Start/End: Complemental strand, 1583961 - 1583903
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    ||||||||| ||||||||||||||| || ||||||||||||||| |||  |||||||||    
T  1583961 atttttatgaaataaagagctatttattaatatttatattttaggaaacatcatttcat 1583903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 516
Target Start/End: Original strand, 7574550 - 7574668
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||| ||||  || | | ||||| |||  | | |||||||| |||||| |||||||    
T  7574550 tgggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaatagctatt 7574649  T
Q  498 tgttgatatttatatttta 516  Q
    | |  ||||||||||||||    
T  7574650 tatcaatatttatatttta 7574668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 522
Target Start/End: Original strand, 24189075 - 24189173
Alignment:
Q  424 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    |||||||||||||| |||| |||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| | ||  |||||||||||||||||    
T  24189075 aattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaat 24189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 444
Target Start/End: Complemental strand, 45461731 - 45461689
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  45461731 gaacttctacggtacacctgcaaattacggtgtaccggtactc 45461689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 15716310 - 15716261
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    ||||||||||||||||| | |||| | |||||||||||||||||||||||    
T  15716310 gaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttc 15716261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 20884024 - 20883895
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||||| |||| |||| || | |||||| ||| |||||  | | |||||||  |||||||| ||||| | ||      
T  20884024 ttctacggtacacccttcaattaaggtgtaccagtacacctattttataaatctataagttaacgataacttttatgtgataaagagatatttatcgact 20883925  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | || |||||||    
T  20883924 tttatattttagaaaatattatctcataag 20883895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 29688924 - 29689041
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| ||||||| || ||  |||| | || |  ||||||| | ||||||| |||||    
T  29688924 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgcttcaaatattttacaatttaatgattattttatgaattaaagagttattt 29689023  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  29689024 atcaatatttatatttta 29689041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 533
Target Start/End: Original strand, 40856614 - 40856671
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 533  Q
    ||||||| |||||| ||||||| ||| |||||||||||||||||||  ||||||||||    
T  40856614 ttttatgaaataaaaagctattagttaatatttatattttagaaaacatcatttcata 40856671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 423 - 535
Target Start/End: Original strand, 46879893 - 46880006
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaa-ttaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    |||||||||||||||||||| | || |||| |||||  |||  |||||  ||||||||||| ||||||||  ||||||| ||  ||||||||||||||||    
T  46879893 aaattaaggtgtaccggtacacttatttcataaatcaataaggttaacgattatttttatgtaataaagatatatttgtcgacttttatattttagaaaa 46879992  T
Q  522 tgtcatttcataag 535  Q
    | | ||||| ||||    
T  46879993 tattatttcgtaag 46880006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 48900518 - 48900647
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| ||  || ||||| ||||||| ||| |||| |||| |||||  ||| | ||   ||||||||||| ||||||||| ||||||||||      
T  48900518 ttctacggtacatccttaatttaagatgtaccgatacacctatttcataaatcaataagtaaatgattatttttatgtaataaagagatatttgttgact 48900617  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||| | |||| |||||    
T  48900618 tttatattttaaaaaatattattttataag 48900647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 535
Target Start/End: Original strand, 23406648 - 23406788
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagct 494  Q
    |||| ||||||| |||||||||| | |||| | |||||||||||||||||| ||||| || | | || ||||||  | | |||||||| |||||| | ||    
T  23406648 tttttggaacttatacggtacactcacaaaatgaggtgtaccggtactcctgcttcataattttatatattaacgatcattttttatgcaataaataact 23406747  T
Q  495 atttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||| |  |||||||||||||| ||||  | ||||||||||    
T  23406748 atttttcaatatttatattttataaaacattatttcataag 23406788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 28264749 - 28264801
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||| ||||    
T  28264749 tgggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttc 28264801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 29273382 - 29273266
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  ||||||||||||| |||||| |||  |||   |||   ||| |||||  | ||||||||| || |||||||||||||| ||      
T  29273382 ttctacggtacacccttaaattaaggtgtatcggtacacctgtttcgtgaattaataatttaacgatcatttttatgtaacaaagagctatttgtcgact 29273283  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  29273282 tttatattttagaaaat 29273266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 9682103 - 9682162
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| |||||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  9682103 ttttatgaaataaagagctatttgctaatatttatattttataaaacattatttcataag 9682162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 15090990 - 15090939
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  15090990 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 15090939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 3214932 - 3214810
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcc-----tacttcaaaaatctttaaattaactgtta-tttttatggaataaagagc 493  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||     | ||||| || | | |||||||||  | | |||||||| |||||| |||    
T  3214932 gggaacttctacggtacactcacaaagtgaggtgtaccggtactccagtcttgcttcataattttataaattaacgatcattttttatgtaataaatagc 3214833  T
Q  494 tatttgttgatatttatatttta 516  Q
    |||||||  ||||||||||||||    
T  3214832 tatttgtcaatatttatatttta 3214810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 535
Target Start/End: Original strand, 7574116 - 7574250
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctt-taaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||| |  |||||   ||||||| |||||| |  |||| ||| ||| |||||||||  | ||||||||| |||||| |  |||||||    
T  7574116 gaacttctacggtacactcaaaaattttagtgtaccagtactcttgtttcacaaaacttataaattaacgatcatttttatgaaataaaaatttatttgt 7574215  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
      |||||||||||||| |||| ||||| |||||||    
T  7574216 caatatttatattttaaaaaacgtcatatcataag 7574250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 534
Target Start/End: Complemental strand, 25867311 - 25867177
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||| ||||||| | ||| ||   |||||||||||||| |  |||| ||||| | |||||||||  | | ||| ||| |||||| || ||||||    
T  25867311 ggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttg 25867212  T
Q  500 ttgatatttatattttagaaaatgtcatttcataa 534  Q
    |  |||||||||||||||||||  |||||||||||    
T  25867211 tcaatatttatattttagaaaacatcatttcataa 25867177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 522
Target Start/End: Original strand, 29982057 - 29982179
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||| |||||||||||| ||  ||||||| ||||||| |||| |||| |||   |||   ||| |||||  | ||||||||| || |||||||||||||    
T  29982057 gggaatttctacggtacatccttaaattaatgtgtaccagtacacctatttcgtgaattaataatttaacaatcatttttatgtaacaaagagctatttg 29982156  T
Q  500 ttgatatttatattttagaaaat 522  Q
    | ||  |||||||||||||||||    
T  29982157 tcgacttttatattttagaaaat 29982179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 37001005 - 37001091
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagag 492  Q
    ||||||||||||||   ||||||||||||| |||||| |||| |||| || ||  |||||||||  | ||||||||| |||||||||    
T  37001005 ttctacggtacacctttaaattaaggtgtatcggtacacctatttcataattcaataaattaacaatcatttttatgtaataaagag 37001091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 521
Target Start/End: Complemental strand, 42584168 - 42584047
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| | |||||||| ||||||| ||||| |||| | |||||||| || |  ||||||| | |||   | |||||    
T  42584168 gggaacttctacggtacacctcacaaattgatgtgtaccgatactcctgcttcataaatttataaattaa-tgatcattttatgaattaagttgttattt 42584070  T
Q  499 gttgatatttatattttagaaaa 521  Q
    ||  |||||||||||||||||||    
T  42584069 gtcaatatttatattttagaaaa 42584047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 522
Target Start/End: Original strand, 968496 - 968621
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||  |||||||||||||||   |||||||||||||| |||| | || |||| ||||||  || |||||  | |||||||||  ||||| || |||    
T  968496 tttgggagtttctacggtacacccttcaattaaggtgtaccagtacacatatttcataaatctacaagttaacgataatttttatgtgataaacagatat 968595  T
Q  497 ttgttgatatttatattttagaaaat 522  Q
    || | ||  |||||||||||||||||    
T  968596 ttatcgacttttatattttagaaaat 968621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 15954667 - 15954598
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaac 469  Q
    ||||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||    
T  15954667 gggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaac 15954598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 19503126 - 19503255
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||| ||||||| |  |||||||| ||||||||||| |||  |||| |||||   || |||||  | ||||||| | || ||||| |||||||| ||      
T  19503126 ttctatggtacactcttaaattaagatgtaccggtacacctgtttcataaatcaaaaagttaacgatcatttttacgtaaaaaagaactatttgtcgact 19503225  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  19503226 tttatattttagaaaatattatttcataag 19503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 26605056 - 26605125
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaac 469  Q
    ||||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||    
T  26605056 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaac 26605125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 533
Target Start/End: Original strand, 27800104 - 27800161
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 533  Q
    ||||||| |||||| ||||||| ||  |||||||||||||||||||  ||||||||||    
T  27800104 ttttatgaaataaaaagctattagtcaatatttatattttagaaaacatcatttcata 27800161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 457
Target Start/End: Complemental strand, 32823512 - 32823455
Alignment:
Q  401 ggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaat 457  Q
    |||||||||||||||||||   |||||| |||||||||| ||||||| ||||||||||    
T  32823512 ggaacttctacggtacaccaaacaaattgaggtgtaccgatactcctgcttcaaaaat 32823455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 535
Target Start/End: Original strand, 42902389 - 42902522
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||| |||||||||| | ||| || | |||||||||||||| || |||| ||||| | ||||||||   | | ||| ||| |||||| || ||||| |     
T  42902389 aacttatacggtacactcacaattttaagtgtaccggtactcttatttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttatc 42902488  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
     |||||||||||||||||||  ||||||||||||    
T  42902489 aatatttatattttagaaaacatcatttcataag 42902522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 21699292 - 21699336
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||| ||||| ||||||| ||||||||||||||||||| |||||    
T  21699292 gggaatttctatggtacactcgcaaattaaggtgtaccgatactc 21699336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 40942282 - 40942238
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||    
T  40942282 gggaacttctatggtacatccgtaaattaagatgtaccggtactc 40942238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 41381886 - 41381846
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtact 443  Q
    ||||||||||||||||||| ||||||| ||| |||||||||    
T  41381886 aacttctacggtacacccgtaaattaatgtgcaccggtact 41381846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 431 - 535
Target Start/End: Original strand, 47068993 - 47069097
Alignment:
Q  431 gtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 530  Q
    |||||||||||||| |  |||| |||  || ||||||||  | | ||| ||| |||||| || ||||| || |||||||||||||||||||  |||||||    
T  47068993 gtgtaccggtactcttgtttcacaaaatttaaaattaacgatcactttaatgaaataaaaaggtatttattaatatttatattttagaaaacatcatttc 47069092  T
Q  531 ataag 535  Q
    |||||    
T  47069093 ataag 47069097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 1e-58; HSPs: 106)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 53695386 - 53695521
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  53695386 gggaacttctacggtacacctgcaaattaaggtgtaccggtactcctaattcaaaaatctttaaattaactattatttttatggaataaagagttatttg 53695485  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||| ||||||||||    
T  53695486 ttgatatttatattttagaaaatgttatttcataag 53695521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 400 - 562
Target Start/End: Original strand, 46215772 - 46215934
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  46215772 gggaacttctacggtacactcgcaaattaatgtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttg 46215871  T
Q  500 ttgatatttatattttagaaaatgtcatttcataagnnnnnnnncgtcatttcattgtttata 562  Q
    ||||||||||||||||| |||||||||||| |||||        |||||||||||||||||||    
T  46215872 ttgatatttatattttaaaaaatgtcattttataaggaaaaaaacgtcatttcattgtttata 46215934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 398 - 535
Target Start/End: Original strand, 56361313 - 56361451
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactg-ttatttttatggaataaagagctat 496  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  56361313 ttggaaacttctacggtacacccgcaaattaaggtgtattggtactcctacttcaaaaatctttaaatttacttattatttttatggaataaagagctat 56361412  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  56361413 ttgttgatatttatattttaggaaatgtcatttcataag 56361451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 47302802 - 47302667
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||| ||| |||||||| | ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  47302802 gggaacttctacggtacatccgtaaattaagttttaccggtactcctactttaaaaatctttaaattaactattatttttatgaaataaagagttatttg 47302703  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||||||||    
T  47302702 ttgatatttatattttagaaaatgtcatttcataag 47302667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 9858654 - 9858520
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | |||||||||| ||||||||||| |||||| ||||||||||    
T  9858654 ggaacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattatttttatgaaataaaaagctatttgt 9858555  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||| |||||| |||||    
T  9858554 tgatatttatattttagaaaatatcattttataag 9858520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 31681592 - 31681457
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||  |||||||||||   |||||||||||||||||||| ||||||    
T  31681592 gggaacttctacggtacacccgtaaattaaggtgtaccagtactcccacttcaaaaaaatttaaattaacaaatatttttatggaataaagagttatttg 31681493  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31681492 ttgatatttatattttaaaaaatgtcatttcataag 31681457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 402 - 535
Target Start/End: Complemental strand, 31908846 - 31908713
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| | | ||||||| |||||| |||||||||||    
T  31908846 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctatttgtt 31908747  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||| ||||| ||||||||||||    
T  31908746 gatatttatattttaaaaaatatcatttcataag 31908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 39161798 - 39161935
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    ||||| ||||| || |||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||    
T  39161798 tttggaaacttttatggtacacccgtaaattaaagtgtatcgatactcctacttcaaaaatctttaaattaactattatttttatagaataaagagttat 39161897  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  39161898 ttgttgatatttatattttagaaaatgtcattttataa 39161935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 396 - 535
Target Start/End: Complemental strand, 36091468 - 36091329
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| |||||    
T  36091468 tttttggaacttctacggtacacctgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagcta 36091369  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  36091368 tttgttgatatttgtattttagaaaatatcatttcataag 36091329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 36 - 224
Target Start/End: Original strand, 27572450 - 27572635
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnng-gcctctaaaaaattaattttgttataagtatat 134  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||         ||||||||||||||||||| ||||||| |||||    
T  27572450 ggccggcctaagggccaagcaacccaagcaagggctttaggcctcaaaattttggatgaaaaaaaatgcctctaaaaaattaatttggttataattatat 27572549  T
Q  135 tatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattt 224  Q
    ||||||||| ||||||||||||   || |||| ||| ||||||| ||||||||||| |  |||||| |||||| ||||||||||||||||    
T  27572550 tatatgacagataaattataga---tattttg-ataacttaactaattaccaaaaatgcttcaattactcttgttcatgaattcaaattt 27572635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 37 - 263
Target Start/End: Original strand, 30563537 - 30563756
Alignment:
Q  37 gccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnn-ggcctctaaaaaattaattttgttataagtatatt 135  Q
    |||| |||||||||||||||||||||| ||||| |||||||| || ||||| | | |        ||| |||||||||||||||| ||||||||||||||    
T  30563537 gccgacctaagggccaagcaacccaagtaagggttttaggcctcaaaatttcgtaagaaaaaaaaggcttctaaaaaattaatttggttataagtatatt 30563636  T
Q  136 atatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctcc 235  Q
    |||||||| ||||||| |||||    ||||| ||| ||||||| | ||||||||| |  |||||| |||||| ||||||||||| ||||   ||||||||    
T  30563637 atatgacagataaattgtagac----atttgtatagcttaactaactaccaaaaaggcttcaatttctcttgctcatgaattcagattt---tggtctcc 30563729  T
Q  236 acaaaattgatttttatttaaatattct 263  Q
    |||||||||| |||||| ||||||||||    
T  30563730 acaaaattga-ttttatataaatattct 30563756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 413 - 532
Target Start/End: Original strand, 30891170 - 30891289
Alignment:
Q  413 gtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatat 512  Q
    ||||| || ||||||||||||||||||||||   |||| |||||||| || ||||||| | ||||||||| ||||||||||||||||||||||||| |||    
T  30891170 gtacatccacaaattaaggtgtaccggtactttaactttaaaaatctatatattaactatcatttttatgaaataaagagctatttgttgatatttgtat 30891269  T
Q  513 tttagaaaatgtcatttcat 532  Q
    |||||||||| |||||||||    
T  30891270 tttagaaaatatcatttcat 30891289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 22851433 - 22851244
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnng-gcctctaaaaaattaattttgttataagtatat 134  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||| ||         ||||||||||||||||||| |||||||||||||    
T  22851433 ggccggcctaagggctaagcaacccaagcaagggctttagacctcaaaattttgggtgaaaaaaaacgcctctaaaaaattaatttggttataagtatat 22851334  T
Q  135 tatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggt 228  Q
     |||||| | |||||  | ||||    |||||||||  |||||| ||||||||||| |  |||||| ||||||||||||| | |||||||||||    
T  22851333 catatgatagataaacaacagac----atttgcatagtttaactgattaccaaaaaggcttcaattactcttggtcatgattccaaattttggt 22851244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 400 - 498
Target Start/End: Original strand, 46004356 - 46004453
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||| ||||| | || || |||||||||| ||||| |||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  46004356 gggaacttctacggcacaccagtaagttgaggtgtaccgatactc-tacttcaaaaatctttaaattaactactaattttatggaataaagagctattt 46004453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 403 - 500
Target Start/End: Complemental strand, 51282338 - 51282241
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||||||||||||||||| ||| |||| |||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| || |||||||    
T  51282338 aacttctacggtacacccacaatttaaagtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatttgt 51282241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 535
Target Start/End: Complemental strand, 29646953 - 29646890
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  29646953 ttatttttatggaataaagtgttatttgttgatatttatattttaaaaaatgtcatttcataag 29646890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 265
Target Start/End: Complemental strand, 9363389 - 9363238
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    |||||||| ||||||||||| ||||||||||||||||| |||| |||||||| |  ||||    ||||||     ||| ||| ||||||| | |||||||    
T  9363389 ggcctctataaaattaatttggttataagtatattatacgacagataaattacaagcatt----tgcata-----actgattgccaaaaaggcctcaatt 9363299  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatattctgt 265  Q
     |||||||||||||||||||||||   || ||||||||||||||| |||||| ||||||||||||    
T  9363298 actcttggtcatgaattcaaattt---tgatctccacaaaattga-ttttatataaatattctgt 9363238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 32570775 - 32570640
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||| ||||||| |||| | ||||||||| | |  ||||||| |||||| || ||||    
T  32570775 tgggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaac-gatcattttatgaaataaataggtatt 32570677  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  ||| |||||||||||||||  ||||||||||||    
T  32570676 tgtcaata-ttatattttagaaaacatcatttcataag 32570640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 402 - 535
Target Start/End: Original strand, 43958996 - 43959129
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    |||||||||||||||||  | |||||| ||||||||||||||| ||||||  |||||| |||||||||  | | ||||||| |||||| ||  ||||||     
T  43958996 gaacttctacggtacacttgtaaattatggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagtcatttgtc 43959095  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
    |  |||||||||||||||||  ||||||||||||    
T  43959096 ggcatttatattttagaaaacatcatttcataag 43959129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 522
Target Start/End: Complemental strand, 46663735 - 46663610
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||| | ||||| |||||| ||||||||   | | ||||||| |||||| || |||    
T  46663735 tttgggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaattaatgatcaattttatgaaataaatagttat 46663636  T
Q  497 ttgttgatatttatattttagaaaat 522  Q
    |||| |  |||||||||||| |||||    
T  46663635 ttgtcggcatttatattttaaaaaat 46663610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 36 - 248
Target Start/End: Complemental strand, 36193534 - 36193330
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatatt 135  Q
    ||||||||||||||||||||||| |||||||||| |||| | | ||  |||||||||        | |||||||||||||||||| ||||||||||||||    
T  36193534 ggccggcctaagggccaagcaactcaagcaagggttttaagtctcaatattttggataaaaaaaag-cctctaaaaaattaatttggttataagtatatt 36193436  T
Q  136 atatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctcc 235  Q
    ||||  || || ||||| |||     ||||||| | ||||||| |||| ||||||    |||||| |||||| ||||||||||||||||   || |||||    
T  36193435 atattgcaaatgaattacaga----tatttgcacagcttaactgattatcaaaaagacttcaattactcttgatcatgaattcaaattt---tgatctcc 36193343  T
Q  236 acaaaattgattt 248  Q
    |||||||||||||    
T  36193342 acaaaattgattt 36193330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 30060530 - 30060661
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| || ||||| |||||||||| ||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  30060530 gggaacttctacggtacactcgtaaattgaggtgtaccgatactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 30060629  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | |  |||||||||||||||||| | ||||||    
T  30060630 tcggcatttatattttagaaaatatgatttca 30060661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 535
Target Start/End: Complemental strand, 22413957 - 22413831
Alignment:
Q  409 tacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatattt 508  Q
    ||||||||| ||  |||||||| ||||||||||| |||| |||| |||||  ||| ||||   ||||||||||| ||||||||| ||||||||||  |||    
T  22413957 tacggtacatccttaaattaagatgtaccggtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgactttt 22413858  T
Q  509 atattttagaaaatgtcatttcataag 535  Q
    |||||||| ||||| | ||||||||||    
T  22413857 atattttaaaaaatattatttcataag 22413831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 34936561 - 34936690
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||| |||||||  ||||||||||||||||||||||||  |||| |||||  ||| |||||  | ||||||||| || ||| ||||||| || ||      
T  34936561 ttctacgatacacccttaaattaaggtgtaccggtactcctgtttcataaatcaataagttaacgatcatttttatgtaaaaaatagctattcgtcgact 34936660  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  34936661 tttatattttagaaaatattatttcataag 34936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 531
Target Start/End: Complemental strand, 408466 - 408338
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| || ||||| |||||||||||||||| | ||||| |||||| |||| ||||  | | ||||||  |||||| || ||||||| |    
T  408466 aacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttattaaataaatagttatttgtcg 408367  T
Q  503 atatttatattttagaaaatgtcatttca 531  Q
      |||||||||||||||||| | ||||||    
T  408366 gaatttatattttagaaaatatgatttca 408338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 11109596 - 11109640
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11109596 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 11109640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 25607694 - 25607824
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| | |||||| ||||||||||||||||  |||||| |||| | |||||||||  ||| ||||||| |||||| || |||||||      
T  25607694 acttctacggtacacctcacaaattgaggtgtaccggtactctcacttcataaatttataaattaacgatta-ttttatgaaataaataggtatttgtca 25607792  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    ||| |||||||||||||||  ||||||||||||    
T  25607793 ata-ttatattttagaaaacatcatttcataag 25607824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 34584182 - 34584317
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||| ||||||  |||||||||| | ||| |||||  ||||||| ||| ||||||||| |||||    
T  34584182 gggaacttctacggtacacctcacaaattgaggtgtaccgatactccagcttcaaaaatttataatttaacgattatttt-atgaaataaagagttattt 34584280  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |  |||||||||||||| ||||  |||||| |||||    
T  34584281 ataaatatttatattttataaaacatcattttataag 34584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 534
Target Start/End: Original strand, 55060258 - 55060386
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||| ||||||||  ||||||||||||| ||| |  |||| |||| |||||  |||||||||  | ||||||||| |||| |||||||| ||| ||      
T  55060258 ttctactgtacacccttaaattaaggtgtatcggcatacctatttcataaatcaataaattaacaatcatttttatgtaatatagagctatctgtcgact 55060357  T
Q  506 tttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||||||||| |||||||||||    
T  55060358 tttatattttagaaaatatcatttcataa 55060386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 531
Target Start/End: Original strand, 33491606 - 33491732
Alignment:
Q  405 cttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgat 504  Q
    |||||||||||||| || ||||| | |||||||||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||| |      
T  33491606 cttctacggtacactcgtaaattgaagtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggc 33491705  T
Q  505 atttatattttagaaaatgtcatttca 531  Q
    |||||||||||||||||| | ||||||    
T  33491706 atttatattttagaaaatatgatttca 33491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 516
Target Start/End: Original strand, 49286683 - 49286804
Alignment:
Q  395 attttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagc 493  Q
    |||| |||| ||||||||||||||| | |||||| |||||||||||||||||||||||||| || |  || |||||  ||| ||||||| |||||||||     
T  49286683 atttagggagcttctacggtacacctcacaaattgaggtgtaccggtactcctacttcaaatatttacaatttaacgatta-ttttatgaaataaagagt 49286781  T
Q  494 tatttgttgatatttatatttta 516  Q
    ||||| || |||||||| |||||    
T  49286782 tatttattaatatttatgtttta 49286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 19527130 - 19527014
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| |||||    
T  19527130 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttattt 19527032  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  19527031 atccatatttatatttta 19527014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 444
Target Start/End: Complemental strand, 28038092 - 28038047
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  28038092 tgggaacttctacggtacacccacaaattaaggtgtaccggtactc 28038047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 55722888 - 55722839
Alignment:
Q  395 attttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  55722888 atttagggaacttttacggtacacccgcaaattaaggtgtaccggtactc 55722839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 56272978 - 56272849
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||||||||||||||| |||  |||| |||||  |||  ||||  | ||||||||| || |||||| ||||| | ||      
T  56272978 ttctacggtacacccttaaattaaggtgtaccggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagttatttatcgact 56272879  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  56272878 tttatattttagaaaatattatttcataag 56272849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 398 - 457
Target Start/End: Original strand, 595294 - 595354
Alignment:
Q  398 ttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaat 457  Q
    ||||||| |||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  595294 ttgggaatttctacggtacacctcacaaattgaggtgtaccggtactcctacttcaaaaat 595354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 9579668 - 9579799
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| || ||||| |||||||||||||||||||| | ||| |||||  ||| ||||||| ||||||||| ||||  |      
T  9579668 acttctacggtacacctcataaattgagttgtactggtactcctacttcaaaaatttataatttaacaatta-ttttatgaaataaagagttattcatca 9579766  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||  |||||| |||||    
T  9579767 atatttatattttagaaaacatcattttataag 9579799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 9585363 - 9585494
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| || ||||| |||||||||||||||||||| | ||| |||||  ||| ||||||| ||||||||| ||||  |      
T  9585363 acttctacggtacacctcataaattgagttgtactggtactcctacttcaaaaatttataatttaacaatta-ttttatgaaataaagagttattcatca 9585461  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||  |||||| |||||    
T  9585462 atatttatattttagaaaacatcattttataag 9585494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 48578907 - 48578951
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  48578907 gggaacttctacggtacacccgtaaattaaggtgtaccggtactc 48578951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 535
Target Start/End: Complemental strand, 52940883 - 52940752
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| ||||||||||||| || |||||||||||| |  || ||||   ||| ||||||| ||||||||| ||||| | |    
T  52940883 acttctacggtacaccacataaattgaggtgtaccggtattcttacttcaaaaatttagaatttaaggatta-ttttatgaaataaagagttatttatcg 52940785  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||  |||||| |||||    
T  52940784 atatttatattttagaaaacatcattttataag 52940752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 25505298 - 25505372
Alignment:
Q  172 cttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
    ||||||| |||||| ||||||  |||||| |||||||||||||||||||||||   || |||||||||||||||||||    
T  25505298 cttaactgattacctaaaaagcttcaattactcttggtcatgaattcaaattt---tgatctccacaaaattgatttt 25505372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 535
Target Start/End: Original strand, 42881036 - 42881175
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||||||||||||| |||||||  | |||||  ||||||||||||||  ||||||  |||||| |||||||||  | | ||||||| |||||| || ||    
T  42881036 ttttgggaacttctatggtacacttgtaaattgtggtgtaccggtacttttacttcttaaatctataaattaacaatcaattttatgaaataaatagtta 42881135  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||| | |  |||||||||||||||||| || | |||||||    
T  42881136 tttatcggcatttatattttagaaaatatcttctcataag 42881175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 535
Target Start/End: Original strand, 46564785 - 46564848
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  46564785 ttatttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataag 46564848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 516
Target Start/End: Complemental strand, 1857215 - 1857093
Alignment:
Q  395 attttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgt-tatttttatggaataaagagc 493  Q
    |||||||||||||||||||||||| | |||| | |||||||||||||||||| ||||  || | | ||||| ||| ||   |||||||| | |||| |||    
T  1857215 attttgggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacggtcgttttttatgtagtaaatagc 1857116  T
Q  494 tatttgttgatatttatatttta 516  Q
    |||||||  ||||||||||||||    
T  1857115 tatttgtcaatatttatatttta 1857093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 472 - 534
Target Start/End: Original strand, 49144019 - 49144081
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||| ||||||||| ||||||||||  ||||||||||||||||| | |||||||||    
T  49144019 ttatttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataa 49144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 522
Target Start/End: Complemental strand, 50189419 - 50189297
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||| |||||| || ||||| ||||||||| |||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| |  ||||||    
T  50189419 gggaacttctacagtacactcgtaaattgaggtgtaccagtactcttgcttcataaatctataaactaacgatcaattttatgaaataaataaatatttg 50189320  T
Q  500 ttgatatttatattttagaaaat 522  Q
    | |  ||||||||||||||||||    
T  50189319 tcggcatttatattttagaaaat 50189297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 406 - 532
Target Start/End: Complemental strand, 54851421 - 54851295
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||||||||||||||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | | | | ||      
T  54851421 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 54851322  T
Q  506 tttatattttagaaaatgtcatttcat 532  Q
    ||||||||||| ||||| |||||||||    
T  54851321 tttatattttaaaaaatatcatttcat 54851295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 16004532 - 16004669
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaa-tctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||||||||||| ||||||| | ||| ||   |||||||||||||| || |||||||| | | ||||||||   | | ||| ||| |||||| || ||||    
T  16004532 tgggaacttctatggtacactcacaattttgagtgtaccggtactcttatttcaaaaaatatataaattaaagataaatttaatgaaataaaaaggtatt 16004631  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  |||||||||||||||||||| ||||||||||||    
T  16004632 tgtcaatatttatattttagaaaatatcatttcataag 16004669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 16917624 - 16917495
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   ||||||| |||||| |||| |||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| | ||      
T  16917624 ttctacggtacacccttcaattaagatgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 16917525  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | || |||||||    
T  16917524 tttatattttagaaaatattatctcataag 16917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 25505205 - 25505258
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaattatagacatt 160  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||| |||||||    
T  25505205 taaaaaattaatttggttataggtatattatatgacagataaattacagacatt 25505258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 39103533 - 39103653
Alignment:
Q  396 ttttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagct 494  Q
    ||||| |||||||||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||  ||||||||| |    
T  39103533 ttttgtgaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttattaaataaagagtt 39103631  T
Q  495 atttgttgatatttatatttta 516  Q
    |||| |  ||||||||||||||    
T  39103632 atttatcaatatttatatttta 39103653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 516
Target Start/End: Complemental strand, 12756408 - 12756293
Alignment:
Q  401 ggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| | |||||| ||||||||||||| |||| ||||||| || |  || |||||  ||||||| ||| ||||||||| |||||     
T  12756408 ggaacttctacggtacacctcacaaattgaggtgtaccggtattcctgcttcaaatatttacaatttaacaattatttt-atgaaataaagagttattta 12756310  T
Q  500 ttgatatttatatttta 516  Q
    |  ||||||||||||||    
T  12756309 tcaatatttatatttta 12756293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 522
Target Start/End: Original strand, 17616413 - 17616529
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||||| |||| |||| || | |||| | |||||||||  | |||||||||  |||||||| ||||| | ||      
T  17616413 ttctacggtacacccttcaattaaggtgtaccagtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgact 17616512  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  17616513 tttatattttagaaaat 17616529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 47302386 - 47302342
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  47302386 gggaacttctacggtacacccgtaaattacggtgtaccggtactc 47302342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 51435812 - 51435856
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  51435812 gggaacttctatggtacacccgcaaattaaggtgtaccggaactc 51435856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 5970700 - 5970835
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttg 499  Q
    |||||||||||||||||| | || | | || ||||||||||||| | ||||| || | | ||||||||   | | |||||||| |||||| |||||||||    
T  5970700 ggaacttctacggtacactcacatagtgagatgtaccggtactcttgcttcataattttataaattaataatcattttttatgtaataaatagctatttg 5970799  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    |  |||||||||||||| | ||| ||||||||||||    
T  5970800 tcaatatttatattttatagaatatcatttcataag 5970835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 443
Target Start/End: Complemental strand, 29582376 - 29582329
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtact 443  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||    
T  29582376 ttttgggaacttctacggtacactcacaaattgaggtgtaccggtact 29582329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 41759660 - 41759703
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  41759660 ggaacttctacggtacacccgtaaattaaagtgtaccggtactc 41759703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 472 - 531
Target Start/End: Complemental strand, 48018463 - 48018404
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 531  Q
    ||||||||||| |||||| | |||||||||||| ||||||||||||||||| | ||||||    
T  48018463 ttatttttatgaaataaaaaactatttgttgatttttatattttagaaaatataatttca 48018404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 535
Target Start/End: Original strand, 38955036 - 38955178
Alignment:
Q  394 cattttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagag 492  Q
    ||||| ||||||||||| ||||||| | ||| ||   |||||||||||||| |  |||| ||||| | ||||||||   | | ||| ||| |||||| ||    
T  38955036 catttagggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaag 38955135  T
Q  493 ctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
     |||||||  |||||||||||||||||||| ||||||||||||    
T  38955136 gtatttgtcaatatttatattttagaaaatatcatttcataag 38955178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 535
Target Start/End: Original strand, 42080389 - 42080463
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | ||||||||| |||||| |  |||||||| ||||||||||||||||||| ||||| |||||||    
T  42080389 taaattaacgatcatttttatgaaataaaaaattatttgtttatatttatattttagaaaacgtcatatcataag 42080463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 516
Target Start/End: Original strand, 43349089 - 43349182
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatatttta 516  Q
    |||||| |||||||||||||||||| ||||||| || | ||| |||||  ||| ||||||| ||||||||| ||||| |  ||||||||||||||    
T  43349089 caaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 43349182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 532
Target Start/End: Complemental strand, 50716613 - 50716487
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||||||||| |  |||||||||||||||||||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | | | | ||      
T  50716613 ttctacggtacacacttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 50716514  T
Q  506 tttatattttagaaaatgtcatttcat 532  Q
    ||||||||||| ||||| |||||||||    
T  50716513 tttatattttaaaaaatatcatttcat 50716487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 1605589 - 1605726
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| | |||||| ||| || ||| ||||| | ||||| |||| | |||| | | || |  ||||| | | |||| |||| ||    
T  1605589 tgggaacttctacggtacacctcacaaattgaggggtgccgatactcttgcttcataaatttataaaattaatgatcattttaggaactaaatagctttt 1605688  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||||||||||||  ||||||||||||    
T  1605689 tgttgataattatattttagaaaacatcatttcataag 1605726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 12885049 - 12885106
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatg 93  Q
    |||||| ||||||| |||||||||||| |||||| |||||||| || |||||||||||    
T  12885049 ggccggtctaagggtcaagcaacccaaacaagggttttaggcctcaaaattttggatg 12885106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 516
Target Start/End: Original strand, 24979938 - 24980058
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagct 494  Q
    ||||| ||||||||||||||||| | |||| |||||||||||||||||  | |||| | | | | |||||||||  | | |||||||| |||||| ||||    
T  24979938 ttttgagaacttctacggtacactcacaaaataaggtgtaccggtactattgcttc-atattttataaattaacgataattttttatgtaataaatagct 24980036  T
Q  495 atttgttgatatttatatttta 516  Q
    ||||||  ||||||||||||||    
T  24980037 atttgtcaatatttatatttta 24980058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 27636072 - 27636011
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||| |||| |||||| ||||||||||  |||||||||||||||||||  ||||||||||||    
T  27636072 atttatatgaaataaaaagctatttgtccatatttatattttagaaaacatcatttcataag 27636011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 42177341 - 42177478
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| | |||| | ||||||| |||||||| | ||||| || | | |||||||||  | | |||||||| |||||| | |||||    
T  42177341 tgggaacttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgatcattttttatgaaataaataactatt 42177440  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||||||||||| | ||  ||||||||||||    
T  42177441 tatcaatatttatattttatagaacatcatttcataag 42177478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 46548762 - 46548633
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||||||||||||||| |||| |||  || ||  ||| |||||  | |||||| || ||||||||| | | | | ||      
T  46548762 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcttaattcaataagttaacaatcatttttttgtaataaagagatgtctatcgact 46548663  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||| ||||||||||||    
T  46548662 tttatattttaaaaaatatcatttcataag 46548633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 516
Target Start/End: Original strand, 53973464 - 53973572
Alignment:
Q  408 ctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatat 506  Q
    |||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| ||||| |  ||||    
T  53973464 ctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatcaatat 53973562  T
Q  507 ttatatttta 516  Q
    ||||||||||    
T  53973563 ttatatttta 53973572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 56017127 - 56017066
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||| |||||| ||||||||||  |||||| ||||||| ||||| ||||||||||||    
T  56017127 atttttatgaaataaaaagctatttgtcaatatttctattttaaaaaatatcatttcataag 56017066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 521
Target Start/End: Complemental strand, 3690920 - 3690797
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaatt-aactgttatttttatggaataaagagctat 496  Q
    ||||||||||||||||||||| | |||||| ||||||| || || |||||||||| |||| | |||||| |||  ||||||| ||| |||||   | |||    
T  3690920 tgggaacttctacggtacacctcacaaattgaggtgtatcgatattcctacttcataaatttataaatttaacgattatttt-atgaaataagttgttat 3690822  T
Q  497 ttgttgatatttatattttagaaaa 521  Q
    |||| ||||| ||||||||||||||    
T  3690821 ttgtcgatatctatattttagaaaa 3690797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 12885645 - 12885724
Alignment:
Q  167 catatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
    |||| ||||| | ||||||||||| | ||||||| |||||||||| | ||||||||||   ||| ||||||||||||||||||    
T  12885645 catagcttaattgattaccaaaaaggcctcaattactcttggtcaaggattcaaattt---tggactccacaaaattgatttt 12885724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 27761400 - 27761536
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||| ||||||||||||| | |||| | ||||||| |||||||| | ||||| || | | | |||||||  | | |||||||| |||||| ||||||||    
T  27761400 gggaatttctacggtacactcacaaagtgaggtgtatcggtactcttgcttcataattttatgaattaacgataattttttatgtaataaatagctattt 27761499  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||| | ||  ||||||||||||    
T  27761500 gtcaatatttatattttatagaacatcatttcataag 27761536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 535
Target Start/End: Original strand, 36631111 - 36631171
Alignment:
Q  475 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||| | ||||||||| |||||||||||||| ||||  ||||||||||||    
T  36631111 tttttatgaaataaataactatttgttaatatttatattttataaaacatcatttcataag 36631171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 38836256 - 38836212
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||    
T  38836256 gggaacttctacggtacacctgcaaattacggtgtatcggtactc 38836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 535
Target Start/End: Complemental strand, 43363695 - 43363599
Alignment:
Q  439 gtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||| || | | |||||||||  | ||||||||| |||||| || ||||| || |||||||||||||| ||||  ||| ||||||||    
T  43363695 gtactcctacttcataattttataaattaacgatcatttttatgaaataaatagttatttattaatatttatattttataaaacatcaattcataag 43363599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 52592199 - 52592155
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||    
T  52592199 gggaacttctacggtacatccgtaaattacggtgtaccggtactc 52592155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 535
Target Start/End: Complemental strand, 2443672 - 2443610
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||||||||||||| || | |||  ||||||| ||||||||||||||||||    
T  2443672 ttatttttatgaaataaagagctattt-ttcaaattgttattttataaaatgtcatttcataag 2443610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 13548481 - 13548540
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| |||||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  13548481 ttttatgaaataaagagctatttgctaatatttatattttataaaacattatttcataag 13548540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 531
Target Start/End: Complemental strand, 37748833 - 37748702
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||||  | | ||| |||| ||| ||||||| |  |||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  37748833 gggaacttctacggtacactggtacattgaggtatactggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 37748734  T
Q  500 ttgatatttatattttagaaaatgtcatttca 531  Q
    | |  |||||||||||| ||||||| ||||||    
T  37748733 tcggcatttatattttaaaaaatgtgatttca 37748702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 522
Target Start/End: Original strand, 39412169 - 39412291
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||| |||||||||||||| | ||||||||||||||||| ||||||| || || |||| | |||||||||  | | ||||||  |||||| || |||||    
T  39412169 gggaatttctacggtacacctcacaaattaaggtgtaccgatactcctgctacataaatttataaattaacaatca-ttttataaaataaatagttattt 39412267  T
Q  499 gttgatatttatattttagaaaat 522  Q
     |  || |||||||||||||||||    
T  39412268 atcaatgtttatattttagaaaat 39412291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 531
Target Start/End: Original strand, 42680675 - 42680730
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 531  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||  ||||||||    
T  42680675 ttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttca 42680730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 46222077 - 46222128
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  46222077 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 46222128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 535
Target Start/End: Complemental strand, 46549163 - 46549025
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||||||||||||||| ||||| || |||||| | ||||| | ||||| | |||   |||||| |||||||||  | | ||||||| |||||| || ||    
T  46549163 ttttgggaacttctacgatacactcgtaaattatgatgtactgatactcttgctttctaaatctataaattaacgataaattttatgaaataaatagtta 46549064  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
     ||||||  |||||||||||| ||||| | ||||||||||    
T  46549063 -ttgttggcatttatattttaaaaaatattatttcataag 46549025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 532
Target Start/End: Complemental strand, 48058885 - 48058750
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||  |||||||||||||||  |||||||||| || |||||| |||  |||| |||||  |||  ||||  | ||||||||| || ||| | ||||    
T  48058885 tttgggagtttctacggtacacccttaaattaaggtatatcggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaaaaactat 48058786  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcat 532  Q
    || | ||  ||||||||||||||||| |||||||||    
T  48058785 ttatcgacttttatattttagaaaatatcatttcat 48058750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Complemental strand, 30343232 - 30343190
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||    
T  30343232 gaacttctacggtacacccgcaaattacggtttaccgctactc 30343190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 33075977 - 33076023
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||| ||||||| |||||||||| |||||| |||||||||||||||    
T  33075977 ttggggacttctatggtacacccgtaaattacggtgtaccggtactc 33076023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 524
Target Start/End: Original strand, 34791886 - 34792004
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| |   |||||||||||||||||||| |||  |||| |||| |  || |||||  | ||||||||| ||||||||| ||||| | ||      
T  34791886 ttctacggtacatctttaaattaaggtgtaccggtacacctgtttcataaatttacaagttaacgataatttttatgtaataaagagatatttatcgact 34791985  T
Q  506 tttatattttagaaaatgt 524  Q
    || ||||||||||||||||    
T  34791986 ttcatattttagaaaatgt 34792004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 522
Target Start/End: Complemental strand, 36188276 - 36188178
Alignment:
Q  424 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    |||||||||||||| |||| |||| |||| |||| | ||| |||||  | |||||||||  |||||||| ||||| | ||  |||||||||||||||||    
T  36188276 aattaaggtgtaccagtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaat 36188178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 516
Target Start/End: Original strand, 45692621 - 45692739
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||| | ||||  || | | ||||| |||  | | |||||||| |||||| |||||||    
T  45692621 tgggaacttctacggtacactcgtaaaataaggtgtaccgatactcttgcttcttaattttataaatgaacgataattttttatgtaataaatagctatt 45692720  T
Q  498 tgttgatatttatatttta 516  Q
    | |  ||||||||||||||    
T  45692721 tatcaatatttatatttta 45692739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 52257477 - 52257403
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  52257477 taaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 52257403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Original strand, 53388848 - 53388890
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||| |||||| | ||||||||||||||||||||||||    
T  53388848 gaacttctatggtacatctgcaaattaaggtgtaccggtactc 53388890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 535
Target Start/End: Complemental strand, 54499895 - 54499845
Alignment:
Q  485 ataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  54499895 ataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 54499845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 3763519 - 3763402
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    |||||||||||| |||||| | |||| ||||||||| |||||||  | ||||| || | | |||||||||  ||| |||||||| |||||| | ||||||    
T  3763519 gggaacttctaccgtacactcacaaaataaggtgtatcggtactttttcttcataattttataaattaacgattattttttatgaaataaataactattt 3763420  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  3763419 atcaatatttatatttta 3763402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 19595338 - 19595222
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||||   |||||| |||||||| | ||||||| ||||||| || ||  |||| | || |  ||||||| ||||||||| |||||    
T  19595338 gggaacttctacggtacaccttacaaattgaggtgtactgatactcctgcttcaaatat-ttacaatttaatgattattttatgaaataaagagttattt 19595240  T
Q  499 gttgatatttatatttta 516  Q
     || ||||||||||||||    
T  19595239 attaatatttatatttta 19595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 27950258 - 27950303
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||    
T  27950258 gggaacttctacggtacacctcacaaattgaggtgtaccggtactc 27950303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 40319400 - 40319271
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||| |||||||||  ||||||| |||||||||||| |||| |||| |||||  ||| ||| |  | |||||| || ||||||||| ||||| |  |      
T  40319400 ttctatggtacacccttaaattaaagtgtaccggtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaact 40319301  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | |||| |||||    
T  40319300 tttatattttagaaaatattattttataag 40319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 535
Target Start/End: Original strand, 46630676 - 46630781
Alignment:
Q  431 gtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 529  Q
    |||||||||||||| |  |||| ||||| | |||||||||  | | ||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||    
T  46630676 gtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattt 46630775  T
Q  530 cataag 535  Q
    ||||||    
T  46630776 cataag 46630781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 535
Target Start/End: Complemental strand, 47920607 - 47920546
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||| |||||| || ||| ||| ||||||||||||||||||||| | |||| |||||    
T  47920607 atttttatgaaataaaaagttatatgtcgatatttatattttagaaaatattattttataag 47920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 352474 - 352590
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||  |||||||| | |||| | |||||||||| |||||||  |||| || | | |||||||||  | ||||||||  |||||| | ||||||     
T  352474 gggaacttccgcggtacactcacaaagtgaggtgtaccgatactcctgtttcataattttataaattaacgatcatttttatataataaataactatttt 352573  T
Q  500 ttgatatttatatttta 516  Q
    || ||||||||||||||    
T  352574 ttaatatttatatttta 352590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 3716731 - 3716687
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||  | |||||| |||||||||||||||    
T  3716731 gggaacttctacggtacacttggaaattacggtgtaccggtactc 3716687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 535
Target Start/End: Original strand, 9356457 - 9356517
Alignment:
Q  475 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||  |||||| ||||||||||| |||||||||||||| | ||| | ||||||||||    
T  9356457 tttttataaaataaatagctatttgttaatatttatattttatagaatattatttcataag 9356517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 535
Target Start/End: Original strand, 30951147 - 30951259
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||| ||||||| |||| |||| |||| |||||  ||||||| |  | ||||||||| ||||||||| ||||| |  |  |||||||||||||||||    
T  30951147 aaattaaagtgtaccagtacacctatttcataaatcaataaattatcgatcatttttatgtaataaagagatatttatcaacttttatattttagaaaat 30951246  T
Q  523 gtcatttcataag 535  Q
     | |||| |||||    
T  30951247 attattttataag 30951259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 535
Target Start/End: Original strand, 32288979 - 32289039
Alignment:
Q  475 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| |||||| ||||||||||| ||||||||| |||| | ||  ||||||||||||    
T  32288979 tttttatgaaataaatagctatttgttaatatttatactttatagaacatcatttcataag 32289039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 37855526 - 37855486
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtac 442  Q
    |||||||||||||||| | | ||||||||||||||||||||    
T  37855526 gaacttctacggtacatctgtaaattaaggtgtaccggtac 37855486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 94)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 401 - 532
Target Start/End: Complemental strand, 37909763 - 37909632
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  37909763 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaaattttaaattaactattatttttatggaataaagagctatttgt 37909664  T
Q  501 tgatatttatattttagaaaatgtcatttcat 532  Q
    |||||||||||||||| |||||||||||||||    
T  37909663 tgatatttatattttataaaatgtcatttcat 37909632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 403 - 535
Target Start/End: Complemental strand, 11598518 - 11598386
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||     
T  11598518 aacttctacggtacacctgcaaattaaggtgtaccgatactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctattttttt 11598419  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||||||||||||||    
T  11598418 atatttatattttagaaaatgtcatttcataag 11598386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 403 - 535
Target Start/End: Original strand, 20212156 - 20212288
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20212156 aacttctaccgtacacccgtaaactaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagctatttgttg 20212255  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||| |||||||||||||    
T  20212256 atatttatattttagaaaacgtcatttcataag 20212288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 34438187 - 34438321
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34438187 gggaacttctatggtacacccgtaaattaaggtgtaccggcactaatacttcaaaaatctttaaattaactattatttttatggaataaagagctatttg 34438286  T
Q  500 ttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||||||||||||||||||||||||||||||||    
T  34438287 ttgatatttatattttagaaaatgtcatttcataa 34438321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 6513262 - 6513397
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||    
T  6513262 gggaacttctacggtacatctgtaaattaaggtgtaccggtactcctactttaaaaaaatttaaattaactattatttttatggaataaagagctatttg 6513361  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||||||||    
T  6513362 ttgatatttatattttagaaaatgtcatttcataag 6513397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 398 - 535
Target Start/End: Original strand, 43690020 - 43690157
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||  |||||||||||  ||||||||||||||||||||||||||    
T  43690020 ttgggaacttctacgatacacccgcaaattaaggtgtattggtactcccacttcaaaaaaatttaaattaacaattatttttatggaataaagagctatt 43690119  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||| | |||| |||||    
T  43690120 tgttgatatttatattttagaaaattttattttataag 43690157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 32499551 - 32499416
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||| |||||||||||||||| ||||||||||| |||||||||| ||||||||||| | |||||||||| | |||||||||||||||||| |||||||||    
T  32499551 gggatcttctacggtacacccacaaattaaggtataccggtacttctacttcaaaattttttaaattaattattatttttatggaataaaaagctatttg 32499452  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||  |||||| ||||||||||    
T  32499451 ttgatatttatattttaagaaatgtaatttcataag 32499416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 402 - 529
Target Start/End: Complemental strand, 36489675 - 36489548
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||| |||||||| ||||||||| || || |||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  36489675 gaacttctatggtacacctgcaaattaaagtatatcggtactcatacttcaaaaatctttaaattaattactatttttatggaataaagagctatttgtt 36489576  T
Q  502 gatatttatattttagaaaatgtcattt 529  Q
    ||||||||||||||||||||| ||||||    
T  36489575 gatatttatattttagaaaatatcattt 36489548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 6438172 - 6438307
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||| || ||||||||| | |||||||||| | ||||||||| |||||| |||||||||    
T  6438172 gggaacttctacggtaaatccgtaaattaaggtgtgccggtactcttaattcaaaaatttataaattaactataatttttatgaaataaaaagctatttg 6438271  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||| ||||||||||||    
T  6438272 ttgatatttatattttagaaaatatcatttcataag 6438307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 402 - 516
Target Start/End: Complemental strand, 33413110 - 33412996
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| |||| | |||||||||||| ||| |||||||||||||||| |||||||||    
T  33413110 gaacttctacggtacacctgtaaattaaggtgtaccggtactcctactttaaaattttttaaattaactattagttttatggaataaagaactatttgtt 33413011  T
Q  502 gatatttatatttta 516  Q
    |||||||||||||||    
T  33413010 gatatttatatttta 33412996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 414 - 535
Target Start/End: Complemental strand, 12547759 - 12547638
Alignment:
Q  414 tacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatatt 513  Q
    |||||||||||||||||||||||  |||||| |||||||||||| | |||||||||| ||||||||||| |||||| |||||||| ||||||||||||||    
T  12547759 tacacccgcaaattaaggtgtacgagtactcttacttcaaaaatttataaattaactattatttttatgaaataaaaagctatttattgatatttatatt 12547660  T
Q  514 ttagaaaatgtcatttcataag 535  Q
    ||||||||| ||||||||||||    
T  12547659 ttagaaaatatcatttcataag 12547638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 107 - 265
Target Start/End: Original strand, 20506600 - 20506749
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctctt 206  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||| ||||    ||||| ||| ||||||||||||||||||||||||| ||| |||||    
T  20506600 taaaaaattaatttggttataagtatattatgtgacagataaattacagac----atttgtataacttaacttattaccaaaaaagtctctattactctt 20506695  T
Q  207 ggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatattctgt 265  Q
     |||||||||||||||||   |||||||||||||||||| |||||| ||||||||||||    
T  20506696 -gtcatgaattcaaattt---tggtctccacaaaattga-ttttatataaatattctgt 20506749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 422 - 535
Target Start/End: Complemental strand, 40370855 - 40370742
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    |||||||| |||||  |||| |||||||| |||||  |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40370855 caaattaaagtgtattggtattcctactttaaaaaaatttaaattaattattatttttatggaataaagagttatttgttgatatttatattttagaaaa 40370756  T
Q  522 tgtcatttcataag 535  Q
    ||||||||||||||    
T  40370755 tgtcatttcataag 40370742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 104 - 249
Target Start/End: Original strand, 8267385 - 8267523
Alignment:
Q  104 ctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgct 203  Q
    |||||||||||||||||  ||||||||||||||||||| | |||||||  |||||||    |||||| ||||||| ||||||||||| |  |||||| ||    
T  8267385 ctctaaaaaattaatttgattataagtatattatatgagagataaattccagacatt----tgcatagcttaactgattaccaaaaatgcatcaattact 8267480  T
Q  204 cttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
    |||||||||||||||||||||    |||||||||||||||||||||    
T  8267481 cttggtcatgaattcaaattt---aggtctccacaaaattgatttt 8267523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 36 - 249
Target Start/End: Complemental strand, 11033322 - 11033116
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatatt 135  Q
    ||||||| |||||| ||||||| ||||||||||| |||||||| || ||||||   ||       || || |||||||||||||| ||||||||||||||    
T  11033322 ggccggcttaagggtcaagcaatccaagcaagggttttaggcctcaaaattttatgtgaaaaaaaggtctttaaaaaattaatttggttataagtatatt 11033223  T
Q  136 atatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctcc 235  Q
    |||||| | ||||| || |||||||    ||||||  |||| | ||| |||||||   ||||||| |||||| ||||||||||||||||   ||||||||    
T  11033222 atatgatagataaactacagacatt----tgcatagtttaattgatttccaaaaatacctcaattactcttgatcatgaattcaaattt---tggtctcc 11033130  T
Q  236 acaaaattgatttt 249  Q
    ||||||||||||||    
T  11033129 acaaaattgatttt 11033116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 101 - 265
Target Start/End: Complemental strand, 37606036 - 37605880
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    |||||||||||||||||||| ||||||||||| |||||||||| |||||||    |||   ||||||||| ||||||| |||||||||||    ||||||    
T  37606036 ggcctctaaaaaattaatttagttataagtatgttatatgacagataaatt----acaagcatttgcatagcttaactgattaccaaaaagacttcaatt 37605941  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatattctgt 265  Q
     ||||| |||||||| ||||||||   | |||||||||||||||| |||||| ||||||||||||    
T  37605940 actcttagtcatgaactcaaattt---tagtctccacaaaattga-ttttatataaatattctgt 37605880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 250
Target Start/End: Original strand, 39303420 - 39303562
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    |||||||||||||||||||| ||||||| |||||||||| ||| |||||||| | ||    |||||||||  |||| | ||||||||||| || ||||||    
T  39303420 ggcctctaaaaaattaatttggttataaatatattatataacagataaattacacac----atttgcataaattaattgattaccaaaaatgtatcaatt 39303515  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgattttt 250  Q
     |||| |||||| |||||||||||   || ||||||||||||||||||||    
T  39303516 actctaggtcatcaattcaaattt---tgatctccacaaaattgattttt 39303562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 46 - 249
Target Start/End: Complemental strand, 36521091 - 36520897
Alignment:
Q  46 agggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatattatatgacata 145  Q
    |||||||||||||||||||||| |||||| ||| || |||||||||||         || ||||||||||||||  ||||||| |||||||||||||| |    
T  36521091 agggccaagcaacccaagcaagtgctttaagcctcaaaattttggatggaaaaaattcccctaaaaaattaattgggttataattatattatatgaca-a 36520993  T
Q  146 taaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctccacaaaattga 245  Q
    ||||||| |||     ||||||||| ||||||| |||| |||||  | ||  ||| ||||| |||||||||||||||||   ||||||||||||||||||    
T  36520992 taaattacaga----tatttgcataacttaactaattatcaaaacggcctttattactctt-gtcatgaattcaaattt---tggtctccacaaaattga 36520901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 535
Target Start/End: Complemental strand, 34665981 - 34665841
Alignment:
Q  395 attttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagc 493  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||| | |  | | |||||||||| ||| |||||||| || ||| ||     
T  34665981 atttagggaacttctacggtacacccgcaaattaaggtgtaccggtactctcgctt-acatttttataaattaactattattttttatgaaagaaatagg 34665883  T
Q  494 tatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |||||||| || ||||||||||||||| |||||| |||||    
T  34665882 tgtttgttgacatatatattttagaaaatatcattttataag 34665841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 38073105 - 38073240
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||| ||||||| |||| | ||||||||| | |  ||||||| |||||| || ||||    
T  38073105 tgggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaac-gatcattttatgaaataaatagatatt 38073203  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  ||| |||||||||||||||  ||||||||||||    
T  38073204 tgtcaata-ttatattttagaaaacatcatttcataag 38073240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 36 - 249
Target Start/End: Original strand, 36076296 - 36076504
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatg--nnnnnnnggcctctaaaaaattaattttgttataagtata 133  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||  ||         |||||||||||| ||||||| ||||||| ||||    
T  36076296 ggccggtctaagagccaagcaacccaagcaagggttttaggccacaaaattttgagtgaataaaaaaggcctctaaaaatttaatttggttataaatata 36076395  T
Q  134 ttatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtct 233  Q
     | ||||| | ||||| || ||||    ||||||||| ||||||| |||| ||| || | |||| || ||||||||| |||||||||||||   || |||    
T  36076396 gtgtatgatagataaactacagac----atttgcataacttaactgattatcaagaaggcctcagttactcttggtcttgaattcaaattt---tgatct 36076488  T
Q  234 ccacaaaattgatttt 249  Q
    ||||| ||||||||||    
T  36076489 ccacacaattgatttt 36076504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 38617728 - 38617862
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||| ||||||||| || ||||| |||||||||||||||| | ||||  |||||| |||||||||  ||| ||||||| ||| || || ||||||    
T  38617728 gggaacttcaacggtacactcgtaaattgaggtgtaccggtactcttgcttcgtaaatctataaattaacaattaattttatgaaat-aatagttatttg 38617826  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||| ||||||||||| ||||||||||||    
T  38617827 tcgtcatttatgttttagaaaatatcatttcataag 38617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 22595136 - 22595007
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  ||||||||||||||||||||  ||  |||| |||||  ||| |||||  | ||||||||| || ||| |||||||||| ||      
T  22595136 ttctacggtacacccttaaattaaggtgtaccggtacatctgtttcataaatcaataagttaacgatcatttttatgtaaaaaaaagctatttgtcgact 22595037  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  22595036 tttatattttagaaaatattatttcataag 22595007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 21136473 - 21136417
Alignment:
Q  104 ctctaaaaaattaattttgttataagtatattatatgacatataaattatagacatt 160  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  21136473 ctctaaaaaattaatttggttataagaatattatatgacagataaattatagacatt 21136417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 19636164 - 19636239
Alignment:
Q  459 tttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||||||||| ||||||| | | ||||||||| ||||| || ||||||||| ||||||||||||||||||||||    
T  19636164 tttaaattaactattattttgaagaaataaagagatatttattaatatttatagtttagaaaatgtcatttcataa 19636239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 19834757 - 19834832
Alignment:
Q  459 tttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||||||||| ||||||| | | ||||||||| ||||| || ||||||||| ||||||||||||||||||||||    
T  19834757 tttaaattaactattattttgaagaaataaagagatatttattaatatttatagtttagaaaatgtcatttcataa 19834832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 13536885 - 13536999
Alignment:
Q  107 taaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctctt 206  Q
    |||||||||||||| || ||||||||||||||||||| |||||||| ||||    ||||| ||| ||||||| ||   |||||| || | |||| ||| |    
T  13536885 taaaaaattaatttggtcataagtatattatatgacagataaattacagac----atttgaatagcttaactgat---caaaaaggttttaattactcat 13536977  T
Q  207 ggtcatgaattcaaattttggt 228  Q
    ||||||||||||||||||||||    
T  13536978 ggtcatgaattcaaattttggt 13536999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 15354832 - 15354702
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaat-aaagagctatttgttgat 504  Q
    |||||||||||||||  ||||||||||||||| |||| |||  |||| |||||  |||||||||| | ||||||||| ||| ||||| |||||||| ||     
T  15354832 ttctacggtacacccttaaattaaggtgtaccagtacacctgtttcataaatcaataaattaactatcatttttatgtaataaaagaactatttgtcgac 15354733  T
Q  505 atttatattttagaaaatgtcatttcataag 535  Q
     ||||||||||| ||||| | ||||| ||||    
T  15354732 ttttatattttaaaaaatattatttcctaag 15354702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 474 - 532
Target Start/End: Original strand, 19268640 - 19268698
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||    
T  19268640 atttttatgaaataaagagctatttgtcgatatttatattttagaaaatattatttcat 19268698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 29943955 - 29943826
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||||||||||||||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | | | | ||      
T  29943955 ttctacggtacacccttaaattaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgact 29943856  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||| ||||||||||||    
T  29943855 tttatattttaaaaaatatcatttcataag 29943826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 532
Target Start/End: Original strand, 37781866 - 37781998
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| ||||||||  |||||| | ||||| |||| | ||||| |||  | ||||| ||| |||||||||||||||    
T  37781866 gggaacttctacggtacacctcacaaattgaggtgtacatgtactcttccttcataaatttataaatgaacgatcatttt-atgaaataaagagctattt 37781964  T
Q  499 gttgatatttatattttagaaaatgtcatttcat 532  Q
    ||  |||||||| ||||||||||  |||||||||    
T  37781965 gtcaatatttatgttttagaaaacatcatttcat 37781998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 41555431 - 41555547
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| |||||    
T  41555431 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttattt 41555529  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  41555530 atcaatatttatatttta 41555547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 5389202 - 5389246
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  5389202 gggaacttctacggtacacccgcaaattaaggtgtaccggcactc 5389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 6606258 - 6606310
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaatttt 88  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  6606258 ggccggcctaagggccaagccacccaagcaagggctttaggcctcaaaatttt 6606310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 535
Target Start/End: Complemental strand, 12071536 - 12071426
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||| ||||||||||||||||||||||||||||| ||  |||||||  ||| ||||||| | ||||||| ||||| |  |||||||||||||||||||     
T  12071536 aaattgaggtgtaccggtactcctacttcaaaaat-ttataattaacgatta-ttttatgaagtaaagagttatttatcaatatttatattttagaaaac 12071439  T
Q  523 gtcatttcataag 535  Q
     |||||| |||||    
T  12071438 atcattttataag 12071426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 42640850 - 42640984
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||| ||||| | |||||| |||| ||||||||||| ||||||| |||| | ||||||||| | |  ||||||| |||||| || |||||    
T  42640850 gggaacttctacggcacacctcacaaattgaggtataccggtactcttacttcataaatttataaattaac-gatcattttatgaaataaataggtattt 42640948  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  ||| |||||||||||||||  ||||||||||||    
T  42640949 gtcaata-ttatattttagaaaacatcatttcataag 42640984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 1353911 - 1353868
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  1353911 ggaacttctacggtacacccgcaaattaaggtgtaccagtactc 1353868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 535
Target Start/End: Original strand, 5155766 - 5155829
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  5155766 ttatttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataag 5155829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 33494343 - 33494205
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggt--gtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    |||||||||||||||||||| || ||||| ||||  ||| |||||||| | ||||   ||| | |||||||||  | | |||||||  |||||||| |||    
T  33494343 tgggaacttctacggtacactcgtaaattgaggtatgtatcggtactcttgcttctttaatttataaattaacgatcaattttatgatataaagagttat 33494244  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||| |  |||||||||||||||||| ||||||||||||    
T  33494243 ttgtcggcatttatattttagaaaatatcatttcataag 33494205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 461 - 531
Target Start/End: Original strand, 6588297 - 6588367
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 531  Q
    |||||||||  ||||||||||| ||||||||  ||||||| ||  ||||||||||||||||||||||||||    
T  6588297 taaattaacaattatttttatgaaataaagaattatttgtcgagttttatattttagaaaatgtcatttca 6588367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 9589520 - 9589403
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||||||||  || | | ||||| |||  | | |||||||| | |||| ||||||||    
T  9589520 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaatagctattt 9589421  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  9589420 gtcaatatttatatttta 9589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 15362469 - 15362585
Alignment:
Q  400 gggaacttctacggtacacccgc-aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||||    ||||| |||||||||||||||||| ||||||| || | ||| |||||  ||| ||||||| ||||||||| |||||    
T  15362469 gggaacttctacggtacaccttataaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgatta-ttttatgaaataaagagttattt 15362567  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  15362568 atcaatatttatatttta 15362585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 1580247 - 1580383
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||| ||||||||||||| | |||| | |||||||||||||||| | ||||| || | | | |||||||  | | |||||||| |||||| ||||||||    
T  1580247 gggaatttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttatgaattaacgataattttttatgtaataaatagctattt 1580346  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||| | ||  ||||||||||||    
T  1580347 gtcaatatttatattttatagaacatcatttcataag 1580383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 3911626 - 3911510
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||||| |||| |||| |||| |||||| ||| |||||  | ||||||| |  |||||||| ||||| | ||      
T  3911626 ttctacggtacacccttcaattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttacgtgataaagagatatttatcgact 3911527  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  3911526 tttatattttagaaaat 3911510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 4673601 - 4673645
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||    
T  4673601 gggaacttctaaggtacacctgcaaattaaggtgtaccggtactc 4673645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 8362405 - 8362536
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| |||||||| |||||||||| ||||||||| | ||| |||||  ||||||| ||| ||||||||  ||||  |      
T  8362405 acttctacggtacacctcataaattgaggtgtactggtactcctatttcaaaaatttataatttaacgattatttt-atgaaataaagacttattcatca 8362503  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||  |||||| |||||    
T  8362504 atatttatattttagaaaacatcattttataag 8362536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 37083617 - 37083573
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  37083617 gggaacttctacggtacatccgcaaattaaggtgtatcggtactc 37083573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 3383190 - 3383328
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgt--tatttttatggaataaagagctat 496  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||  ||||  ||  | | |||||||||| |  | |||||||| |  ||| || | |    
T  3383190 tgggaacttctacggtacatccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgt 3383289  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| || ||||||||||||||| |||||| |||||    
T  3383290 ttgttgacatatatattttagaaaatatcattttataag 3383328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 516
Target Start/End: Original strand, 9122154 - 9122273
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctat 496  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||| || ||||  || | | ||||| |||  | | |||||||| |||||| | ||||    
T  9122154 ttgggaacttctacggtacactcacaaaataaggtgtaccggtacttctgcttcttaattttataaatgaacgatcattttttatgtaataaataactat 9122253  T
Q  497 ttgttgatatttatatttta 516  Q
    ||||  ||||||||||||||    
T  9122254 ttgtcaatatttatatttta 9122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 444
Target Start/End: Original strand, 15771314 - 15771353
Alignment:
Q  405 cttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  15771314 cttctacggtacacccgtaaattaaggtgtaccggtactc 15771353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 20511689 - 20511812
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatatt 135  Q
    ||||| |||||||| ||| |||||||| ||||||||||||| | || ||||||||||        ||| |||||||| ||||||| ||||||| ||||||    
T  20511689 ggccgccctaagggtcaaacaacccaaacaagggctttaggtctcaaaattttggat-aaaaaaaggcatctaaaaatttaatttggttataaatatatt 20511787  T
Q  136 atatgacatataaattatagacatt 160  Q
    || ||||| | |||||| |||||||    
T  20511788 atctgacagaaaaattacagacatt 20511812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 35292918 - 35292783
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||| ||||||| | ||| || | |||||||||||||| |  |||| ||||| | |||||||| | | | ||| ||| |||||| || |||||    
T  35292918 gggaacttctatggtacactcacaattttaagtgtaccggtactcttgtttcataaaatatataaattaaatatcactttaatgaaataaaaaggtattt 35292819  T
Q  499 gttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||  |||||||||||||||||||  |||||||||||    
T  35292818 gtcaatatttatattttagaaaacatcatttcataa 35292783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 529
Target Start/End: Original strand, 45690498 - 45690628
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||   ||  | |||| | ||||||||  | |  ||||||| |||||| |||||||    
T  45690498 tgggaacttctacggtacacctcacaaattgaggtgtaccggtactctcgctctataaatttataaattaa-ggatcattttatgaaataaaaagctatt 45690596  T
Q  498 tgttgatatttatattttagaaaatgtcattt 529  Q
     ||  |||||||||||||||||||| ||||||    
T  45690597 agtcaatatttatattttagaaaatatcattt 45690628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 11813198 - 11813236
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  11813198 ttctacggtacacccacaaattaaggtgtaccggtactc 11813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 535
Target Start/End: Original strand, 25712748 - 25712853
Alignment:
Q  429 aggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatt 528  Q
    |||||||||| |||| ||||||||||||| | ||| |||||  ||||||| ||  ||||||||| ||||| |  |||||||||||||||||||  |||||    
T  25712748 aggtgtaccgatacttctacttcaaaaatttataatttaacgattatttt-ataaaataaagagttatttatcaatatttatattttagaaaacatcatt 25712846  T
Q  529 tcataag 535  Q
    | |||||    
T  25712847 ttataag 25712853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 7673295 - 7673412
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgt-tatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||| ||||  || | | ||||| ||| ||   |||||||| | |||| ||||||||    
T  7673295 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacggtcgttttttatgtagtaaatagctattt 7673394  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  7673395 gtcaatatttatatttta 7673412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 32602303 - 32602420
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||| ||||  || | | ||||| |||  | | |||||||| | |||| ||||||||    
T  32602303 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgataattttttatgtagtaaatagctattt 32602402  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  32602403 gtcaatatttatatttta 32602420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 34188941 - 34188825
Alignment:
Q  400 gggaacttctacggtacacccg-caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||||   |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||| ||||| |||||    
T  34188941 gggaacttctacggtacaccttacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaatgaagagttattt 34188843  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  34188842 atcaatatttatatttta 34188825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 4079402 - 4079346
Alignment:
Q  104 ctctaaaaaattaattttgttataagtatattatatgacatataaattatagacatt 160  Q
    |||| |||||||| ||||||||||| |||||||||||||| | |||||||| |||||    
T  4079402 ctcttaaaaattatttttgttataaatatattatatgacagaaaaattataaacatt 4079346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 13511213 - 13511161
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaatttt 88  Q
    ||||| |||||||| ||||| |||||||||||||||||||||| || ||||||    
T  13511213 ggccgacctaagggtcaagccacccaagcaagggctttaggcctcaaaatttt 13511161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 14532824 - 14532868
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||| |||||| || |||||    
T  14532824 gggaacttctacggtacacccgcaaattacggtgtatcgatactc 14532868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 451
Target Start/End: Original strand, 17451285 - 17451333
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    |||||||||||||||| | |||| |||||||||||||||||||| ||||    
T  17451285 aacttctacggtacactcacaaaataaggtgtaccggtactcctgcttc 17451333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 515
Target Start/End: Original strand, 25331455 - 25331571
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||| ||||  || | | ||||| |||| | | |||||||| | |||| ||||||||    
T  25331455 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaactatcattttttatgtagtaaatagctattt 25331554  T
Q  499 gttgatatttatatttt 515  Q
    ||  |||||| ||||||    
T  25331555 gtcaatatttttatttt 25331571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 35895311 - 35895447
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    |||||||| |||||||||| |  ||| | |||||||||||||||||| ||||| || | | |||||||||    | |||||||| |||||| | ||||||    
T  35895311 gggaacttttacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactattt 35895410  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||| | ||  ||||||||||||    
T  35895411 gtcaatatttatattttatagaacatcatttcataag 35895447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 531
Target Start/End: Original strand, 2283241 - 2283296
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 531  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||  ||||||||    
T  2283241 ttttatgaaataaatagctatttgtcaatatttatattttagaaaacatcatttca 2283296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 531
Target Start/End: Original strand, 4114659 - 4114793
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||||||||||| || |||||| || |||||  |||||| ||||||| || ||||| |||||| |||| ||||  | | ||||||| |||||| || ||    
T  4114659 ttttgggaacttcaaccgtacactcgtaaattcgggtgtaacggtact-ctgcttcataaatctataaactaacgatcaattttatgaaataaatagtta 4114757  T
Q  496 tttgttgatatttatattttagaaaatgtcatttca 531  Q
    ||| | |  |||||||||||||||||| | ||||||    
T  4114758 tttatcggcatttatattttagaaaatataatttca 4114793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 5084924 - 5084975
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  5084924 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 5084975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 446
Target Start/End: Original strand, 8333891 - 8333938
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcct 446  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||    
T  8333891 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcct 8333938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 522
Target Start/End: Original strand, 10456070 - 10456169
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    |||||| |||||||||||| |  ||||||  |||||| |||||||||| | | ||||||| |||||| || ||||| | |  ||||||||||||||||||    
T  10456070 aaattatggtgtaccggtatttttacttcctaaatctataaattaactatcaattttatgaaataaatagttatttatcggcatttatattttagaaaat 10456169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 12002750 - 12002617
Alignment:
Q  401 ggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| | |||||| ||||||| ||||||| ||| || |||||| | ||| |||||  | ||||| ||| ||||||||| ||||      
T  12002750 ggaacttctacggtacacctcacaaattgaggtgtatcggtacttctattttaaaaatttataatttaacgatcatttt-atgaaataaagagttatta- 12002653  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    |  |||||||||||||||||||  |||||| |||||    
T  12002652 tcaatatttatattttagaaaacatcattttataag 12002617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 12182965 - 12182831
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||||   |||| | |||||||||||||||| ||||| | ||||   |||||||||  ||| ||||||| |||||| | ||||||    
T  12182965 gggaacttctacggtacacctaacaaaatgaggtgtaccggtactcttactttataaattgataaattaacgatta-ttttatgaaataaaaaactattt 12182867  T
Q  499 gttgatatttatattttagaaaatgtcatttcataa 534  Q
     |  || ||||||||||||||||  |||| ||||||    
T  12182866 atcaatgtttatattttagaaaacatcatctcataa 12182831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 16637091 - 16637158
Alignment:
Q  462 aaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 529  Q
    ||||||||  ||| ||||||| ||||||||| |||||||||  ||||||||||| |||||| ||||||    
T  16637091 aaattaacgattaattttatgaaataaagagttatttgttggcatttatatttttgaaaatatcattt 16637158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 16814936 - 16814987
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  16814936 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 16814987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 16854216 - 16854267
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  16854216 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 16854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 21404198 - 21404249
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    ||||||||||||||||||| | |||| | |||||||||| ||||||||||||    
T  21404198 gggaacttctacggtacactcacaaaatgaggtgtaccgatactcctacttc 21404249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 36049549 - 36049600
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||  |||||||||||||||||||| ||||||||||||    
T  36049549 aataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataag 36049600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 38963068 - 38963111
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||    
T  38963068 ggaacttctacgttacacctgcaaattaaggtgcaccggtactc 38963111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 535
Target Start/End: Complemental strand, 40588212 - 40588150
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||||||||||||| || | |||  ||||||| ||||||||||||||||||    
T  40588212 ttatttttatgaaataaagagctattt-ttcaaattgttattttataaaatgtcatttcataag 40588150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Complemental strand, 11228031 - 11227989
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||| ||||||||||||||| | ||||||    
T  11228031 gaacttctacggtacacctgcaaattaaggtgtatcagtactc 11227989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 21425554 - 21425480
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | |||||| || |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  21425554 taaattaacgatcatttttgtgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 21425480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 26738377 - 26738303
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | ||||| ||| |||||| || |||||||  |||||||||||||||||||  ||||||||||||    
T  26738377 taaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataag 26738303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 516
Target Start/End: Original strand, 34852354 - 34852471
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||| ||| | |||||| |||||| || ||||| || ||||||| || |  || |||||  ||||||| ||| ||||||||| ||||    
T  34852354 tgggaacttctacggtatacctcacaaattgaggtgtgccagtacttctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttatt 34852452  T
Q  498 tgttgatatttatatttta 516  Q
    | | |||||||||||||||    
T  34852453 tatcgatatttatatttta 34852471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 516
Target Start/End: Complemental strand, 40810802 - 40810709
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatatttta 516  Q
    |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| ||||| |  ||||||||||||||    
T  40810802 caaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttatttatcaatatttatatttta 40810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 3810452 - 3810493
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtact 443  Q
    |||||||||||  |||||| ||||||||||||||||||||||    
T  3810452 gaacttctacgacacacccacaaattaaggtgtaccggtact 3810493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 535
Target Start/End: Original strand, 15205765 - 15205877
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    |||||| |||||||  |||| |||||||||  |||| | |||||||||  | ||||| ||| | ||||||| |||||||  || ||||||||||||||||    
T  15205765 caaattgaggtgtagaggtaatcctacttcgtaaatttataaattaacgatcatttt-atgaagtaaagaggtatttgtcaatgtttatattttagaaaa 15205863  T
Q  522 tgtcatttcataag 535  Q
      ||||||||||||    
T  15205864 catcatttcataag 15205877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 521
Target Start/End: Complemental strand, 25740317 - 25740272
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||    
T  25740317 ttttatgaaataaaaagctatttgtcaatatttatattttagaaaa 25740272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 36023986 - 36023858
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||||| |||| |||| |||| ||||| | || |||||  | |||||||||  |||||||| ||||| | ||      
T  36023986 ttctacggtacacccttcaattaaggtgtaccagtacacctatttcataaatc-taaagttaacgataatttttatgtgataaagagatatttatcgact 36023888  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||| | || |||||||    
T  36023887 tttatattttaaaaaatattatctcataag 36023858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 535
Target Start/End: Complemental strand, 45555786 - 45555653
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    |||||||||||||||| | ||| ||   |||||||||||||| || |||| ||||| | ||||||||   | | ||| ||| |||||| || ||||| |     
T  45555786 aacttctacggtacactcacaactttgagtgtaccggtactcttatttcacaaaatatataaattaatgatcactttaatgaaataaaaaggtatttatc 45555687  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
     |||||||||||||||||||  ||||||||||||    
T  45555686 aatatttatattttagaaaacatcatttcataag 45555653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 1860334 - 1860198
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||| | ||||||| ||| ||   |||||||||||||| || | || ||||| | |||||||||  | | ||| ||| |||||| || |||||    
T  1860334 gggaacttctatgatacacccacaattttgagtgtaccggtactcttattgcacaaaatttataaattaacaatcactttaatgaaataaaaaggtattt 1860235  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |  |||||||||||||||||||  ||||||||||||    
T  1860234 atcaatatttatattttagaaaacatcatttcataag 1860198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 13119217 - 13119101
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| ||   |||||||||||||| |||| |||| |||| |||| | ||| ||||   | |||||||||  |||||||| ||||| | ||      
T  13119217 ttctacggtacatccttcaattaaggtgtaccagtacacctatttcataaatatataagttaaagataatttttatgtgataaagagatatttatcgact 13119118  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  13119117 tttatattttagaaaat 13119101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 522
Target Start/End: Original strand, 13507264 - 13507376
Alignment:
Q  410 acggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatattta 509  Q
    |||||||| ||  |||||||||||||| | ||| |||| |||| |||||  ||| ||||   | ||||||||| ||||||||| ||||| | ||  ||||    
T  13507264 acggtacatccttaaattaaggtgtactgatacacctatttcataaatcaataagttaatgatcatttttatgtaataaagagatatttatcgactttta 13507363  T
Q  510 tattttagaaaat 522  Q
    |||||||||||||    
T  13507364 tattttagaaaat 13507376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 431 - 535
Target Start/End: Original strand, 18008986 - 18009090
Alignment:
Q  431 gtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttc 530  Q
    |||||||||||||| |  |||| |||  || ||||||||  | | ||| ||| |||||| || |||||||| |||||||||||||||||||  |||||||    
T  18008986 gtgtaccggtactcttgtttcacaaaatttaaaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcatttc 18009085  T
Q  531 ataag 535  Q
     ||||    
T  18009086 gtaag 18009090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 535
Target Start/End: Complemental strand, 21836588 - 21836556
Alignment:
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||| ||||||||||||    
T  21836588 atatttatattttagaaaatatcatttcataag 21836556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 513
Target Start/End: Complemental strand, 45157918 - 45157806
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||| | |||| | |||||||||| ||||| | ||||| || | | |||||||||  | | |||||||| |||||| | ||||||||    
T  45157918 gaacttctacggtacactcacaaaatgaggtgtaccgatactctttcttcataagtttataaattaacgatcattttttatgaaataaataactatttgt 45157819  T
Q  501 tgatatttatatt 513  Q
      |||||||||||    
T  45157818 caatatttatatt 45157806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 115; Significance: 4e-58; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 2425 - 2291
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  2425 ggaatttctacgatacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttacggaataaagagctatttgt 2326  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| ||||||||||||||||||||||||||||    
T  2325 tgatatatatattttagaaaatgtcatttcataag 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 4e-58; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 400 - 562
Target Start/End: Complemental strand, 28332528 - 28332366
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||     
T  28332528 gggaacttctacggtacacttgcaaattaaggtgtaccggtactcctatttcaaaaatctttaaattaactattatttttatggaataaagagctatttt 28332429  T
Q  500 ttgatatttatattttagaaaatgtcatttcataagnnnnnnnncgtcatttcattgtttata 562  Q
    || |||||||||||||||||||||||||||||||||        |||||||||||||||||||    
T  28332428 tttatatttatattttagaaaatgtcatttcataagaaaaaaaacgtcatttcattgtttata 28332366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 398 - 535
Target Start/End: Original strand, 13795271 - 13795407
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  13795271 ttgggaacttctacggtacacc-gcaaattaaggtgtaccgatactcctactttaaaaatctttaaattaactattatttttatggaataaagagctatt 13795369  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13795370 tgttgatatttatattttaggaaatgtcatttcataag 13795407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 406 - 529
Target Start/End: Original strand, 2318431 - 2318555
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgttgat 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  2318431 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaattattattttttatggaataaagagctatttgttgat 2318530  T
Q  505 atttatattttagaaaatgtcattt 529  Q
    |||||||||||||||||||||||||    
T  2318531 atttatattttagaaaatgtcattt 2318555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 12362357 - 12362492
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12362357 gggaacttctaaggtacatccgcaaattaaggtgtaccggtacttctatctcaaaaatctttaaattaactattatttttatggaataaagagctatttg 12362456  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| ||||||||||||||||||||||||||||    
T  12362457 ttgatatatatattttagaaaatgtcatttcataag 12362492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 396 - 535
Target Start/End: Original strand, 21051317 - 21051456
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||||| || |||||||||||||||| |||||||||||||||| |||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  21051317 ttttggcaatttctacggtacacccgtaaattaaggtgtaccgatacttctattttaaaaatctttaaattaactattatttttatggaataaagagcta 21051416  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  21051417 tttgttgatatttatatcttagaaaatgtcatttcataag 21051456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 13091319 - 13091184
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| |||||||||    
T  13091319 gggaacttctacggtacacccgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 13091220  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13091219 ttgatatttatattttagaaaatatcatttcataag 13091184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 3425090 - 3425223
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||  ||||||||    
T  3425090 ggaacttctacggtacacccgcaaattaaagtgtaccggtactcctacttcaaaaatctttaaattaactattatttttttgaaataaagtactatttgt 3425189  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||| | ||||||||||||||||||| |||||||    
T  3425190 tgata-taatattttagaaaatgtcatctcataag 3425223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 14967637 - 14967502
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| | |||||||||| | ||||||||| |||||| |||||||||    
T  14967637 gggaacttctacggtacacctgcaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 14967538  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| ||||||||||||||| ||||||||||||    
T  14967537 ttgatatctatattttagaaaatatcatttcataag 14967502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 27118122 - 27117986
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||| |||||  ||| ||| ||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||    
T  27118122 tgggaatttctattgtatacctgcaaattaaggtgtaccggtattcctacttcaaaaaaatttaaattaactattatttttatggaataaagagttattt 27118023  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |||||||||||||||||||||||||||||| |||||    
T  27118022 attgatatttatattttagaaaatgtcattttataag 27117986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 404 - 532
Target Start/End: Complemental strand, 9589610 - 9589482
Alignment:
Q  404 acttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttga 503  Q
    |||||||||||||| || |||||||||||||| |||||||| |||||||||||| | |||||||||| | ||||||||| |||||| |||||||||||||    
T  9589610 acttctacggtacatccacaaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttgttga 9589511  T
Q  504 tatttatattttagaaaatgtcatttcat 532  Q
    |||||||| |||||||||| |||||||||    
T  9589510 tatttatactttagaaaatatcatttcat 9589482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 535
Target Start/End: Complemental strand, 29744307 - 29744173
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    ||||||| |||||||||| | |||||||| |||||||||||||  | |||||||||| | |||||||||| | ||||||||| ||||||||||||||| |    
T  29744307 ggaacttatacggtacactcacaaattaaagtgtaccggtacttttgcttcaaaaatttataaattaactatcatttttatgaaataaagagctatttat 29744208  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||||| ||||||||||||    
T  29744207 tgatatttatattttagaaaatatcatttcataag 29744173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 398 - 535
Target Start/End: Original strand, 37431348 - 37431485
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||||||||||  | ||||||||||||||||||||||     |||| | | ||| ||||  |||||||||||| ||||||||||| ||||||||||||||    
T  37431348 ttgggaacttccgctgtacacccgcaaattaaggtgtcgtaatacttcaatttctaaaaaatttaaattaactattatttttatgaaataaagagctatt 37431447  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37431448 tgttgatatttatattttagaaaatgtcatttcataag 37431485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 41802507 - 41802378
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| ||  |||||||||||||| ||||||| || || |||||| | |||||||||| | ||||||||| ||||||||||||||||||||||    
T  41802507 ttctacggtacatccataaattaaggtgtactggtactcttattttaaaaatttataaattaactatcatttttatgaaataaagagctatttgttgata 41802408  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||| |||||||||||||  ||||| |||||    
T  41802407 tttgtattttagaaaataacatttaataag 41802378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 424 - 535
Target Start/End: Original strand, 35817373 - 35817484
Alignment:
Q  424 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatg 523  Q
    |||||||||||| |||||||  | ||| |||||||| | |||||||| | ||||||||| ||||||  |||||||||||||||||||||||||||||||     
T  35817373 aattaaggtgtatcggtacttttgctttaaaaatctatcaattaactataatttttatgaaataaaatgctatttgttgatatttatattttagaaaata 35817472  T
Q  524 tcatttcataag 535  Q
    ||||||||||||    
T  35817473 tcatttcataag 35817484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 422 - 535
Target Start/End: Complemental strand, 35682478 - 35682365
Alignment:
Q  422 caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||||| | |||||| |||||| | |||||||||||  ||||||| || | ||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  35682478 caaattaggatgtaccagtactcttgcttcaaaaatcaataaattacctatcatttttatgaaataaagagctatatgttgatatttatattttaaaaaa 35682379  T
Q  522 tgtcatttcataag 535  Q
    | ||||||||||||    
T  35682378 tatcatttcataag 35682365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 31588642 - 31588506
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||  |  |||| |||| | |||||||| || |  ||||||| |||||| | |||||    
T  31588642 tgggaacttctacggtacacctcacaaattgaggtgtaccggtacttttgtttcataaatttataaattaa-tgatcattttatgaaataaaaaactatt 31588544  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  |||||||||||||||||||| ||||||||||||    
T  31588543 tgtcaatatttatattttagaaaatatcatttcataag 31588506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 41732400 - 41732259
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    |||||||||||| ||||| | |||||||||||||||||||| | |||||||| |||||||    ||||||   ||||| ||||| ||||| | || ||||    
T  41732400 ggcctctaaaaatttaatatggttataagtatattatatgatagataaattacagacatt----tgcataatataactgattactaaaaatgcctaaatt 41732305  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
     |||||||||||||||||||||||   || |||||| ||||||||||||    
T  41732304 actcttggtcatgaattcaaattt---tgatctccataaaattgatttt 41732259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 522
Target Start/End: Complemental strand, 17069391 - 17069269
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||| ||| || ||||| |||||||||||||||||| ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||    
T  17069391 gggaacttctacggtgcactcgtaaattgaggtgtaccggtactcctgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 17069292  T
Q  500 ttgatatttatattttagaaaat 522  Q
    | |  ||||||||| ||||||||    
T  17069291 tcggcatttatattatagaaaat 17069269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 535
Target Start/End: Complemental strand, 22780921 - 22780783
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctat 496  Q
    |||||||||||||||||||||  |||||||||| |||||||| |||| |  || |||||| | |||||||||| | | ||||| || || ||| || | |    
T  22780921 ttgggaacttctacggtacacttgcaaattaagatgtaccggcactcttgtttaaaaaatttataaattaactatcattttttgtgaaaaaaatagttgt 22780822  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||| ||||||| |||||||||| ||||||||||||    
T  22780821 ttgttgacatttatagtttagaaaatatcatttcataag 22780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 34303055 - 34302918
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||  ||||  ||  | | |||||||||| | | |||||||| || ||| || | ||    
T  34303055 tgggaacttctacggtacacctgcaaattacggtgtaccggtactctcacttataatttttataaattaactataattttttatgaaaaaaataggtgtt 34302956  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || ||||||||||||||| |||||| |||||    
T  34302955 tgttgacatatatattttagaaaatatcattttataag 34302918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 32467451 - 32467405
Alignment:
Q  398 ttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  32467451 ttgggaacttctacggtacacccgcaaattacggtgtaccggtactc 32467405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 468
Target Start/End: Original strand, 4039469 - 4039538
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaa 468  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||| |||| | ||||||||    
T  4039469 gggaacttctacggtacacctcacaaattaaggtgtaccggtactcttacttcataaatttataaattaa 4039538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 444
Target Start/End: Complemental strand, 13410949 - 13410904
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  13410949 tgggaacttctacggtacatccgcaaattaaggtgtaccggtactc 13410904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 15264443 - 15264314
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||| |||| |||||| |||| |||| |||||  ||| ||||   ||||||||||| ||||||  | || |||||||      
T  15264443 ttctacggtacacccttaaattaagatgtatcggtacacctatttcataaatcaataagttaatgattatttttatgtaataaaaggatacttgttgact 15264344  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  15264343 tttatattttagaaaatattatttcataag 15264314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 28440819 - 28440918
Alignment:
Q  162 atttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctccacaaaattgatttttatttaaatatt 261  Q
    ||||||||| ||||||| ||||||||||| |  |||||| ||||||||||| |||||||||||   |  ||||||||||||||| |||||| ||||||||    
T  28440819 atttgcataccttaactgattaccaaaaaggcttcaattactcttggtcataaattcaaattt---taatctccacaaaattga-ttttatataaatatt 28440914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 40756541 - 40756657
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||||| ||||||| || |  || |||||  ||||||| ||| ||||||||| |||||    
T  40756541 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgcttcaaatatttacaatttaaccattatttt-atgaaataaagagttattt 40756639  T
Q  499 gttgatatttatatttta 516  Q
     | |||||||||||||||    
T  40756640 atcgatatttatatttta 40756657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 403 - 531
Target Start/End: Complemental strand, 36156244 - 36156116
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    ||||||||| |||||| || ||||| |||||||||||||||| | ||| | |||||| |||| ||||  | | ||||||| |||||| || ||||||| |    
T  36156244 aacttctacagtacactcgtaaattgaggtgtaccggtactcttgctttataaatctataaactaacgatcaattttatgaaataaatagttatttgtcg 36156145  T
Q  503 atatttatattttagaaaatgtcatttca 531  Q
      |||||||||||||||||| | ||||||    
T  36156144 gcatttatattttagaaaatatgatttca 36156116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 43585734 - 43585682
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaatttt 88  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  43585734 ggccggcctaagggccaagccacccaagcaagggctttaggcctcaaaatttt 43585682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 13645520 - 13645655
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||  ||||| || |||||  ||||||||| ||||| ||||||  |||||| |||||||||  | | ||||||| |||||| || ||||||    
T  13645520 gggaacttctacattacactcgtaaattgtggtgtaccgttactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagttatttg 13645619  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||||| ||||||||  ||||||||||||    
T  13645620 tcggcatttatatcttagaaaacatcatttcataag 13645655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 5204617 - 5204733
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||||| ||| ||| || |  || |||||  ||||||| ||| ||||||||| |||||    
T  5204617 gggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgctttaaatatttacaatttaacgattatttt-atgaaataaagagttattt 5204715  T
Q  499 gttgatatttatatttta 516  Q
     | |||||||||||||||    
T  5204716 atcgatatttatatttta 5204733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 6260424 - 6260307
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgt-tatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| |  ||| | |||||||||||||||| | ||||| || | | ||||| |||| | | |||||||| |||||| ||||||||    
T  6260424 gggaacttctacggtacactcataaaatgaggtgtaccggtactcttccttcataattttataaataaactatctttttttatgtaataaatagctattt 6260325  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  6260324 gtcaatatttatatttta 6260307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 516
Target Start/End: Complemental strand, 13119202 - 13119089
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    ||||||||||||||||   |||| | |||||||||||||||||| ||||| || | | |||||||||  | ||||||||  |||||| |||||||| |      
T  13119202 aacttctacggtacacttacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcatttttatataataaatagctatttttca 13119103  T
Q  503 atatttatatttta 516  Q
    ||||||||||||||    
T  13119102 atatttatatttta 13119089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 263
Target Start/End: Complemental strand, 37941359 - 37941227
Alignment:
Q  123 ttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaat 222  Q
    ||||||||||||||||||| | |||||||  |||||||    || ||| ||||||| | ||  |||||   ||||||| |||||||||||||||||||||    
T  37941359 ttataagtatattatatgatagataaattgcagacatt----tgtataacttaactcactataaaaaagacctcaattactcttggtcatgaattcaaat 37941264  T
Q  223 tttggtggtctccacaaaattgatttttatttaaatattct 263  Q
    ||   ||||||| |||||||||| |||||| ||||||||||    
T  37941263 tt---tggtctcaacaaaattga-ttttatataaatattct 37941227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 39939033 - 39939149
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| || |  || |||||  ||| ||||||| ||||||||| |||||    
T  39939033 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgatta-ttttatgaaataaagagttattt 39939131  T
Q  499 gttgatatttatatttta 516  Q
     |  |||||||| |||||    
T  39939132 atcaatatttatgtttta 39939149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 444
Target Start/End: Complemental strand, 42917533 - 42917480
Alignment:
Q  391 taacattttgggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||| ||||||||||| || ||||||||| |||||||||||||||||||||||    
T  42917533 taacaatttgggaacttttatggtacacccacaaattaaggtgtaccggtactc 42917480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 535
Target Start/End: Original strand, 1490710 - 1490822
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||||||||| || || || | |||||||||||| |||||||| | | | ||||||| |||||| || | |||||||| |||||||||||| ||| |    
T  1490710 aaattaaggtgtatcgttattcttgcttcaaaaatctataaattaaatatcacttttatgaaataaaaagttttttgttgacatttatattttaaaaact 1490809  T
Q  523 gtcatttcataag 535  Q
     |||||| |||||    
T  1490810 atcattttataag 1490822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 531
Target Start/End: Original strand, 2270807 - 2270915
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||| |||||||||||||||| | ||||| |||||| |||||||||  | | ||||||| |||||| |  ||||||| |  ||||||||||||||||||    
T  2270807 aaattgaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaaaat 2270906  T
Q  523 gtcatttca 531  Q
     | ||||||    
T  2270907 atgatttca 2270915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 402 - 516
Target Start/End: Original strand, 9604433 - 9604548
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgt 500  Q
    ||||||||||||||||| | |||| | |||||||||||||||||||||||  || | | ||||| |||  | | |||||||| | |||| ||||||||||    
T  9604433 gaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaatagctatttgt 9604532  T
Q  501 tgatatttatatttta 516  Q
      ||||||||||||||    
T  9604533 caatatttatatttta 9604548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 32624583 - 32624448
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctt-taaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||| || |  |||||   |||||||||||||| |  |||| ||| ||| |||||||||  | ||||||||  |||||| || |||||    
T  32624583 gggaacttctacggtatactcagaaattttagtgtaccggtactcttgtttcacaaaacttataaattaacgatcatttttataaaataaaaagttattt 32624484  T
Q  499 gttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||  ||||||||||||||||||| ||||| ||||||    
T  32624483 gtcaatatttatattttagaaaacgtcatatcataa 32624448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 535
Target Start/End: Complemental strand, 25395147 - 25395073
Alignment:
Q  461 taaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||  | ||||||||  ||||||||||||||  ||||| ||||||||||||||||| ||||||| ||||    
T  25395147 taaattaacaatgatttttatacaataaagagctattcattgatttttatattttagaaaatatcatttcgtaag 25395073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 460 - 522
Target Start/End: Original strand, 33654889 - 33654951
Alignment:
Q  460 ttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||||||  ||||||||||| ||||||||| ||||||||||  ||||||||||| |||||    
T  33654889 ttaaattaacgattatttttatgaaataaagagttatttgttgacttttatattttaaaaaat 33654951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 522
Target Start/End: Original strand, 35777377 - 35777503
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||||||  ||||||||||||||    |||||||||||||| |||| |||| |||| |||||| ||| |||||  | |||||||||  |||||||| |     
T  35777377 ttttgggagtttctacggtacacctttcaattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatc 35777476  T
Q  496 tttgttgatatttatattttagaaaat 522  Q
    ||| | ||  |||||||||||||||||    
T  35777477 tttatcgacttttatattttagaaaat 35777503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 535
Target Start/End: Original strand, 39816506 - 39816640
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||||||||||||||||| | |||| | |||||||||||||||| | ||||| || | | |||||||||  | |||||| |  |||||| | |||||| |    
T  39816506 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcatttttgttaaataaataactatttat 39816605  T
Q  501 tgatatttatattttagaaaatgtcatttcataag 535  Q
      | |||||||||||| | ||| ||||||||||||    
T  39816606 caacatttatattttatagaatatcatttcataag 39816640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 532
Target Start/End: Original strand, 4839521 - 4839578
Alignment:
Q  475 tttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcat 532  Q
    |||||||  ||||||||| ||||||| ||| ||||||||||||||||| |||||||||    
T  4839521 tttttataaaataaagagttatttgtcgatttttatattttagaaaatatcatttcat 4839578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 403 - 535
Target Start/End: Complemental strand, 6561229 - 6561096
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||| |||||||| |||||||||||| || | |||  ||  | | |||||||||| | | |||||||| |  ||| || | ||||||    
T  6561229 aacttctacggtacacctgcaaattacggtgtaccggtattcttgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgtt 6561130  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
    || || ||||||||||||||| |||||| |||||    
T  6561129 gacatatatattttagaaaatatcattttataag 6561096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 13127388 - 13127251
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||  | |||| | |||||||||||||||| | ||||| || | | |||||||||  | | |||||||| |||||| | |||||    
T  13127388 tgggaacttctacggtacattcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgataattttttatgaaataaataactatt 13127289  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||||||||||| | ||  ||||||||||||    
T  13127288 tatcaatatttatattttatagaacatcatttcataag 13127251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 43167342 - 43167213
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||| ||||||||  |||||||||| || |||||| |||  |||| |||||  ||| ||||   | || |||||| || |||||||||||||| ||      
T  43167342 ttctactgtacacccttaaattaaggtatatcggtacacctgtttcataaatcaataagttaaagatcatctttatgtaacaaagagctatttgtcgact 43167243  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  43167242 tttatattttagaaaatattatttcataag 43167213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 5512681 - 5512729
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcct 446  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  5512681 tgggaacttctacggtacacctcacaaattgaggtgtaccggtactcct 5512729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 13588864 - 13589000
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||| ||||||||| ||| ||   |||||||||||||  |  | || ||||| | |||||||||  | | ||| ||| |||||| || |||||    
T  13588864 gggaacttctatggtacacccacaattttgagtgtaccggtacttttgttgcacaaaatttataaattaacgatcactttaatgaaataaaaaggtattt 13588963  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  |||||||||||||||||||| ||||||||||||    
T  13588964 gtcaatatttatattttagaaaatatcatttcataag 13589000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 516
Target Start/End: Complemental strand, 27980184 - 27980064
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||||||||||||||||||| |||  |||| | || |||| |||||||| |  |||| || | | |||||||||  | ||||||||| |||||  |||||    
T  27980184 ttttgggaacttctacggtaaacctacaaagtgagatgtagcggtactcttgtttcataattttataaattaacgatcatttttatgtaataattagcta 27980085  T
Q  496 tttgttgatatttatatttta 516  Q
    |||||  ||||||||||||||    
T  27980084 tttgtcaatatttatatttta 27980064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 41609485 - 41609369
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||||| ||||  ||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| | ||      
T  41609485 ttctacggtacacccttcaattaaggtgtaccagtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 41609386  T
Q  506 tttatattttagaaaat 522  Q
    ||||||||||| |||||    
T  41609385 tttatattttaaaaaat 41609369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 522
Target Start/End: Original strand, 1445729 - 1445848
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||  || ||||| || |||| ||||| || ||||||| |||| | |||| ||||  | | ||||||| |||||| || ||||||| |    
T  1445729 aacttctacggtacattcgtaaattgagatgtatcggtattcttacttcataaatttataaactaacgatcaattttatgaaataaatagttatttgtcg 1445828  T
Q  503 atatttatattttagaaaat 522  Q
      ||||||||||||||||||    
T  1445829 gcatttatattttagaaaat 1445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 533
Target Start/End: Original strand, 7456282 - 7456341
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 533  Q
    ||||||||| | ||||||||||||||||||  ||||||||||| ||||| | ||||||||    
T  7456282 atttttatgtagtaaagagctatttgttgacttttatattttaaaaaatattatttcata 7456341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 10453602 - 10453551
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  10453602 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 10453551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 535
Target Start/End: Original strand, 14575497 - 14575608
Alignment:
Q  424 aattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatg 523  Q
    |||||||||||||| |||| |||| |||| |||||| ||| |||||  | |||||||||  ||||| || ||||| | ||  |||||||||||||||||     
T  14575497 aattaaggtgtaccagtacacctatttcataaatctataagttaacgataatttttatgtgataaaaagatatttatcgacttttatattttagaaaata 14575596  T
Q  524 tcatttcataag 535  Q
    | || |||||||    
T  14575597 ttatctcataag 14575608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 19126235 - 19126184
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  19126235 aataaaaagatatttgttaatatttatattttagaaaacatcatttcataag 19126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 19527959 - 19528014
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttgga 91  Q
    |||||||||||| |||||||||||||| ||| | ||||||||| || |||||||||    
T  19527959 ggccggcctaagtgccaagcaacccaatcaatgactttaggcctcaaaattttgga 19528014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 535
Target Start/End: Complemental strand, 20464912 - 20464850
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||||||||||||| || | |||  ||||||| ||||||||||||||||||    
T  20464912 ttatttttatgaaataaagagctattt-ttcaaattgttattttataaaatgtcatttcataag 20464850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 521
Target Start/End: Complemental strand, 23408660 - 23408538
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||| |||||||||||||||  |  ||||| ||||||||| || || ||||||||||||| | ||| |||||  | ||||| ||| ||||||||| ||||    
T  23408660 tggggacttctacggtacacttcataaattgaggtgtaccagtgcttctacttcaaaaatttataatttaacgatcatttt-atgaaataaagagttatt 23408562  T
Q  498 tgttgatatttatattttagaaaa 521  Q
    | |  |||||||||||||||||||    
T  23408561 tatcaatatttatattttagaaaa 23408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 534
Target Start/End: Complemental strand, 31076856 - 31076817
Alignment:
Q  495 atttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  31076856 atttgttgatatttttattttagaaaatatcatttcataa 31076817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 516
Target Start/End: Original strand, 5140672 - 5140785
Alignment:
Q  403 aacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||  || ||| || | ||| |||||  ||| ||||||| ||| ||||| ||||| |     
T  5140672 aacttctacggtacacctcacaaattgaggtgtaccggtactcctgttttaaatatttataatttaacgatta-ttttatgaaatgaagagttatttatc 5140770  T
Q  502 gatatttatatttta 516  Q
     ||||||||||||||    
T  5140771 aatatttatatttta 5140785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 521
Target Start/End: Complemental strand, 19189510 - 19189393
Alignment:
Q  404 acttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||||||||| |  ||||| |||||| |  ||||||||||||||||||| | ||| |||||  ||| ||||||| ||||||||| ||||  |      
T  19189510 acttctacggtacacctcataaattgaggtgtgctcgtactcctacttcaaaaatttataatttaacgatta-ttttatgaaataaagagttattcatca 19189412  T
Q  503 atatttatattttagaaaa 521  Q
    |||| ||||||||||||||    
T  19189411 atatatatattttagaaaa 19189393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 14054813 - 14054684
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||| |||||||||  ||||||| |||||||||||| |||| |||| |||||  ||| ||| |  | |||||| || ||||||||| ||||| |  |      
T  14054813 ttctatggtacacccttaaattaaagtgtaccggtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaact 14054714  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | |||| |||||    
T  14054713 tttatattttagaaaatattattttataag 14054684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 521
Target Start/End: Original strand, 18002684 - 18002772
Alignment:
Q  432 tgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaa 521  Q
    ||||||||||||||| |||||||||| | ||| |||| || |  ||||||  ||||||||| ||||| |  |||||||||||||||||||    
T  18002684 tgtaccggtactcctgcttcaaaaatttataatttaa-tgattattttataaaataaagagttatttatcaatatttatattttagaaaa 18002772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 23690501 - 23690617
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||||||| |  ||||| ||||||||||||| | || ||||||| || |  || |||||  ||||||| ||| ||||||||| |||||    
T  23690501 gggaacttctacggtacacctcaaaaattgaggtgtaccggtatttctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttattt 23690599  T
Q  499 gttgatatttatatttta 516  Q
     |  ||||||||||||||    
T  23690600 atcaatatttatatttta 23690617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 533
Target Start/End: Complemental strand, 28205104 - 28205047
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 533  Q
    ||||||| |||||| |||||||  || |||||||||||||||||||  ||||||||||    
T  28205104 ttttatgaaataaaaagctattaattaatatttatattttagaaaacatcatttcata 28205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 535
Target Start/End: Complemental strand, 34259943 - 34259810
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttattttt-atggaataaagagctatttgtt 501  Q
    ||||||||||||| ||   |||| | |||| ||||||||||||| ||||| || | | |||||||||  | |||||| ||| |||||| | ||||||||     
T  34259943 aacttctacggtatactaacaaagtgaggtctaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatttgtc 34259844  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
     |||||||||||||| | ||  ||||||||||||    
T  34259843 aatatttatattttatagaacatcatttcataag 34259810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 468
Target Start/End: Complemental strand, 39979750 - 39979681
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaa 468  Q
    |||||||||||||||||||| | |||||| |||||||||| |||| || ||||| |||| | ||||||||    
T  39979750 gggaacttctacggtacacctcacaaattgaggtgtaccgatacttctgcttcataaatttataaattaa 39979681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 535
Target Start/End: Original strand, 2148126 - 2148262
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||| ||||||| | ||| || | |||||  ||||||| |  |||| |||  || ||||||||  | | ||| ||| |||||| || |||||    
T  2148126 tgggaacttctatggtacactcacaattttaagtgtaatggtactcttgtttcacaaaatttaaaattaacgatcactttaatgaaataaaaaggtattt 2148225  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||| |||||||||||||| ||||  ||||||||||||    
T  2148226 gttaatatttatattttaaaaaacatcatttcataag 2148262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 531
Target Start/End: Original strand, 10400724 - 10400832
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||| ||||||| | |||||| | ||||| |||||| |||| ||||  | | ||||||| |||||| || ||||||| |  ||||||||||||||||||    
T  10400724 aaattgaggtgtatcagtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaaaat 10400823  T
Q  523 gtcatttca 531  Q
     | ||||||    
T  10400824 atgatttca 10400832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 24098276 - 24098232
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||| ||||||| |||||||| ||||||| |||||||    
T  24098276 gggaacttctacagtacacctgcaaattacggtgtactggtactc 24098232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 36427905 - 36427949
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||    
T  36427905 gggaacttctacggtacactcacaaagtgaggtgtaccggtactc 36427949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 431 - 534
Target Start/End: Original strand, 37963025 - 37963129
Alignment:
Q  431 gtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcattt 529  Q
    |||||||||||||| |  |||| ||||| | |||||||||  | ||||||||  |||||| |  |||||||  ||||||||||||||||||| ||||| |    
T  37963025 gtgtaccggtactcttgtttcacaaaatttataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaacgtcatat 37963124  T
Q  530 cataa 534  Q
    |||||    
T  37963125 cataa 37963129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 42486605 - 42486657
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca 452  Q
    ||||| ||||||||||||| | |||| | |||||||||||||||| |||||||    
T  42486605 gggaatttctacggtacactcacaaagtgaggtgtaccggtactcatacttca 42486657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 43237355 - 43237399
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||| |||||||| |||||||| |||||| ||||||||    
T  43237355 gggaacttctatggtacacctgcaaattacggtgtatcggtactc 43237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 111; Significance: 9e-56; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 29651 - 29521
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  29651 gggaacatctacggtacacctgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattattttttatggaataaagagctattt 29552  T
Q  499 gttgatatttatattttagaaaatgtcattt 529  Q
    |||||||||||||||||||||||||||||||    
T  29551 gttgatatttatattttagaaaatgtcattt 29521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 9e-56; HSPs: 90)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 37466089 - 37465955
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  37466089 gggaacttctacggtacaaccgcaaattaaggtgtaacggtgctcctacttcaaaaatctttaaattaactattatttttatggaataaaaagctatttg 37465990  T
Q  500 ttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||||||||||||||||| |||||||||    
T  37465989 ttgatatttatattttagaaaatgttatttcataa 37465955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 410 - 535
Target Start/End: Complemental strand, 16323954 - 16323829
Alignment:
Q  410 acggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatattta 509  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16323954 acggtacacctgcaaattaaggtgtaccgatactcctactttaaaaatctttaaattaactattatttttatggaataaagagctatttgttgatattta 16323855  T
Q  510 tattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||    
T  16323854 tattttagaaaatgtcatttcataag 16323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 529677 - 529541
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  529677 tgggaacttctacggtacacccgtaaattaaagtgtatcgatactcctacttcaaaaatctttaaattaactattatttttatagaataaagagttattt 529578  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||||||||||| |||||    
T  529577 gttgatatttatattttagaaaatgtcattttataag 529541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 17642479 - 17642344
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| | ||||||||| |||||| |||||||||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 17642380  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||||||||| ||||||||||||    
T  17642379 ttgatatttatattttagaaaatatcatttcataag 17642344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 414 - 532
Target Start/End: Original strand, 39347146 - 39347264
Alignment:
Q  414 tacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatatt 513  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  39347146 tacacccgcaaattaaggtgtaccgatactcctacttcaaaaatctttaaattaactattatttttatgaaataaagagctatttgttgatatttatatt 39347245  T
Q  514 ttagaaaatgtcatttcat 532  Q
    |||| ||||||||||||||    
T  39347246 ttaggaaatgtcatttcat 39347264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 402 - 535
Target Start/End: Original strand, 43485053 - 43485186
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||||||||  |||||||||| | ||||||||||||||||||| ||||||||||    
T  43485053 gaacttctacggtacacccgcaaattaaggtgtaccggtacttttatttcaaaaaaatttaaattaaatattatttttatggaataaagtgctatttgtt 43485152  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
     |||||||||||||||||||||||||||||||||    
T  43485153 aatatttatattttagaaaatgtcatttcataag 43485186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 403 - 535
Target Start/End: Complemental strand, 2273412 - 2273280
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||| ||||||||||||    
T  2273412 aacttctacggtacacctgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactgtcatttttatgaaataaaaagctatttgttg 2273313  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||| ||||||||||||| |||||| |||||    
T  2273312 atatttgtattttagaaaatatcattttataag 2273280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 535
Target Start/End: Original strand, 13482906 - 13483042
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    ||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||| |||||||| ||||||||||  ||||    
T  13482906 tttggaaacttctacggtacacccgcaaattaaggtatatcg-tactcctacttcaaaaatctttaaattaactattatttttttggaataaagtactat 13483004  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||| | |||||||| ||||||||||||||||||    
T  13483005 ttgttgata-taatattttaaaaaatgtcatttcataag 13483042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 43049941 - 43049807
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    |||||| | ||||||||| ||| |||||||||||||||  ||||| |||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  43049941 gggaacgtttacggtacatccgtaaattaaggtgtaccaatactcttacttcaaaaatctataaattaactattatttttatgaaataaagagctatttg 43049842  T
Q  500 ttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||||||||||||||||| |||||| ||||    
T  43049841 ttgatatttatattttagaaaatatcattttataa 43049807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 26439568 - 26439658
Alignment:
Q  445 ctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26439568 ctactttaaaaatctttaaattaactattatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 26439658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 101 - 249
Target Start/End: Original strand, 1214246 - 1214387
Alignment:
Q  101 ggcctctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaatt 200  Q
    |||||||||||||||||||   ||||||||||||||||||||| |||||||| |||||||    |||||| ||||||| |||||||||||  ||||||||    
T  1214246 ggcctctaaaaaattaattaatttataagtatattatatgacaaataaattacagacatt----tgcatagcttaactgattaccaaaaagatctcaatt 1214341  T
Q  201 gctcttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
     ||||||||||||||||||| |||   ||||||||||||||||||||||    
T  1214342 actcttggtcatgaattcaatttt---tggtctccacaaaattgatttt 1214387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 403 - 535
Target Start/End: Complemental strand, 39029719 - 39029587
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    ||||||||||||||| | ||||||||| ||||||| ||| || |||||||||| ||| |||||||| ||||||| ||||| ||||||||| | |||||||    
T  39029719 aacttctacggtacatctgcaaattaaagtgtaccagtattcttacttcaaaattctataaattaattgttattattatgaaataaagagttgtttgttg 39029620  T
Q  503 atatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||||| | ||||||||||    
T  39029619 atatttatattttagaaaatattatttcataag 39029587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 395 - 531
Target Start/End: Complemental strand, 2732194 - 2732066
Alignment:
Q  395 attttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagct 494  Q
    |||| ||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||        ||||| |    
T  2732194 atttagggaatttcttcggtacatccgcaaattaaggtgtacctgtactcctacttcaaaaatatttaaattaactattattttt--------aagaggt 2732103  T
Q  495 atttgttgatatttatattttagaaaatgtcatttca 531  Q
    |||||||||||||||||||||||||||| ||||||||    
T  2732102 atttgttgatatttatattttagaaaatatcatttca 2732066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 535
Target Start/End: Complemental strand, 43921540 - 43921401
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaa-ttaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    ||||| || |||||||||||||| ||||| ||||| | ||| | ||||| |||||||||||||| || ||||||| | ||||||||| ||||||||||||    
T  43921540 tttggaaatttctacggtacacctgcaaaattaagatatactgatactcttacttcaaaaatctatacattaactatcatttttatgaaataaagagcta 43921441  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  43921440 tttgttgatatttgtattttagaaaatatcatttcataag 43921401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 28430234 - 28430011
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnng--gcctctaaaaaattaattttgttataagtata 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||          |||| |||||||||||||| ||||||| ||||    
T  28430234 ggccgacctaagggccaagcaacccaagcaagggctttaggcctcaaaattttggatgaaaaaaaaaagcctttaaaaaattaatttggttataaatata 28430135  T
Q  134 ttatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtct 233  Q
     ||||||| | |||||||  ||||    |||| |||| |||||||  ||||||| || | ||||||| |||||||| ||||||| ||||||   ||||||    
T  28430134 atatatgatagataaatttaagac----atttacataacttaactggttaccaagaaggcctcaattactcttggtaatgaatttaaattt---tggtct 28430042  T
Q  234 ccacaaaattgatttttatttaaatattctgt 265  Q
    |||||||||||| |||||| ||||||||||||    
T  28430041 ccacaaaattga-ttttatataaatattctgt 28430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 439 - 534
Target Start/End: Complemental strand, 4475399 - 4475304
Alignment:
Q  439 gtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||||||||||||||||||||||||||| | |||| |||||| || |||||||||||  |||||||||||||||||||||||||||||| ||||    
T  4475399 gtactcctacttcaaaaatctttaaattaattattatatttatgaaacaaagagctattaattgatatttatattttagaaaatgtcattttataa 4475304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 403 - 532
Target Start/End: Original strand, 42444244 - 42444372
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    |||||||||  ||||||| ||||||||||||||||| ||||   | || |||||||| || ||||||| | ||||||||| |||||||||||||||||||    
T  42444244 aacttctactatacacccacaaattaaggtgtaccg-tactttaattttaaaaatctatatattaactatcatttttatgaaataaagagctatttgttg 42444342  T
Q  503 atatttatattttagaaaatgtcatttcat 532  Q
    |||||| ||||||||||||| |||||||||    
T  42444343 atatttgtattttagaaaatatcatttcat 42444372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 521
Target Start/End: Original strand, 36886168 - 36886283
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||| |||| ||||||| |||| ||||||||||||| || || |||||| | |||||||||| | |||||| || ||||||||||||||||||||||    
T  36886168 ttctacgatacatccgcaaaataagatgtaccggtactcttaatttaaaaatatataaattaactatcatttttttgaaataaagagctatttgttgata 36886267  T
Q  506 tttatattttagaaaa 521  Q
    ||||||||||| ||||    
T  36886268 tttatattttaaaaaa 36886283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 516
Target Start/End: Original strand, 19718333 - 19718435
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||| |||||||||||||||||||||||||         ||||| |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||    
T  19718333 ttctatggtacacccgcaaattaaggtgtact--------tactttaaaaatctataaattaactattatttttatgaaataaagagctatttgttgata 19718424  T
Q  506 tttatatttta 516  Q
    |||||||||||    
T  19718425 tttatatttta 19718435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 36 - 278
Target Start/End: Complemental strand, 17845125 - 17844887
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggc----ctctaaaaaattaattttgttataagta 131  Q
    |||||| ||||||||||||||||||||||||||| | |||||| || |||||||||||              ||||||||||||||||| ||||||||||    
T  17845125 ggccggtctaagggccaagcaacccaagcaagggttataggcctcaaaattttggatgaaaaaaaaaaaaatctctaaaaaattaatttggttataagta 17845026  T
Q  132 tattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggt 231  Q
    |||||||| ||| |||||||  ||||    ||||||||| ||||||| |||||||||||   ||||||| |||||| ||||||| | ||||||   || |    
T  17845025 tattatataacagataaatttaagac----atttgcatagcttaactgattaccaaaaagacctcaattactcttgatcatgaaattaaattt---tgat 17844933  T
Q  232 ctccacaaaattgatttttatttaaatattctgtcgaagaaaataaa 278  Q
    ||| |||||||||| |||||| |||||||| |||  || ||||||||    
T  17844932 ctctacaaaattga-ttttatataaatattatgtaaaaaaaaataaa 17844887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 31158960 - 31158825
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||| |||||||| ||||||| | |||||| | ||||  |||||| |||||||||  ||| ||||||| |||||| || ||||||    
T  31158960 gggaacttctacggtacactcgcaaattgaggtgtatcagtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttatttg 31158861  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
      |  |||||||||||| ||||| ||||||||||||    
T  31158860 ccggcatttatattttaaaaaatatcatttcataag 31158825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 13241343 - 13241123
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaatt-aattttgttataagtatat 134  Q
    |||||| ||||||| ||| |||| |||| ||||| |||||||| || | |||||||||       |||| |||||||||| ||||| ||||| |||||||    
T  13241343 ggccggtctaagggtcaaacaactcaagtaagggttttaggcctca-atttttggatgaagaaaaggccactaaaaaatttaatttggttatgagtatat 13241245  T
Q  135 tatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttggtggtctc 234  Q
    ||||||| | |||||||| ||||    ||||||||| ||||||| |||| |||||| |||| |||| |||| | ||| ||| ||||||||   |||||||    
T  13241244 tatatgatagataaattacagac----atttgcatagcttaactgattatcaaaaaggtct-aattactctagatcacgaactcaaattt---tggtctc 13241153  T
Q  235 cacaaaattgatttttatttaaatattctgt 265  Q
    ||||||||||| |||||| ||||||||||||    
T  13241152 cacaaaattga-ttttatataaatattctgt 13241123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 423 - 520
Target Start/End: Original strand, 12107508 - 12107604
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaa 520  Q
    ||||| ||||||||||||||||||||||||||||| | ||| ||||| |||| |||||||  |||||||| ||||| | |||||||||||||||||||    
T  12107508 aaattgaggtgtaccggtactcctacttcaaaaatttataacttaacggtta-ttttatgagataaagagttatttatcgatatttatattttagaaa 12107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 535
Target Start/End: Original strand, 32718961 - 32719090
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||||||||||| |  ||||||||||||||||||||||||| |||| ||||   ||| |||||  | ||||||||| || ||||| |||||||| ||      
T  32718961 ttctacggtacacacttaaattaaggtgtaccggtactcctatttcataaattaataagttaacgatcatttttatgtaaaaaagaactatttgtcgact 32719060  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  32719061 tttatattttagaaaatattatttcataag 32719090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 516
Target Start/End: Original strand, 29454142 - 29454260
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatt 497  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||| ||||| || | | |||||||||  | | |||||||| |||||| | |||||    
T  29454142 tgggaacttctacggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatt 29454241  T
Q  498 tgttgatatttatatttta 516  Q
    |||  ||||||||||||||    
T  29454242 tgtcaatatttatatttta 29454260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 19725446 - 19725317
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||  |||||||| ||||| |||||  ||| |||| |||||  ||| ||||   | ||||||||| ||||||||| ||||||||||      
T  19725446 ttctacggtacacccttaaattaagatgtacaggtacatctatttcataaatcaataagttaatgataatttttatgtaataaagagatatttgttgact 19725347  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  19725346 tttatattttagaaaatattatttcataag 19725317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 406 - 535
Target Start/End: Complemental strand, 43460750 - 43460621
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    ||||| |||||||||  |||||||||||||||||||| |||  |||| |||||  |||  ||||  | ||||||||| || |||||||||||||| ||      
T  43460750 ttctatggtacacccttaaattaaggtgtaccggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagctatttgtcgact 43460651  T
Q  506 tttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||||||||| | ||||||||||    
T  43460650 tttatattttagaaaatattatttcataag 43460621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 34332517 - 34332473
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34332517 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 34332473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 531
Target Start/End: Original strand, 36672009 - 36672141
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||| ||||||| || ||||| |||||||||||||||| | ||||| |||||| |||| ||||| | | ||||||| |||||| || || |     
T  36672009 tgggaacttctatggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaactatcaattttatgaaataaatagttacta 36672108  T
Q  499 gttgatatttatattttagaaaatgtcatttca 531  Q
    || |  |||||||||||||||||| | ||||||    
T  36672109 gtcggcatttatattttagaaaatatgatttca 36672141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 39170998 - 39171042
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39170998 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 39171042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 5725970 - 5725831
Alignment:
Q  105 tctaaaaaattaattttgttataagtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctc 204  Q
    ||||||||||||||||  |||||| |||||||||||| | |||||||||||||    ||||||||| ||||  | |||| |||||| | ||||||| |||    
T  5725970 tctaaaaaattaatttgattataaatatattatatgatagataaattatagac----atttgcataacttacttgattatcaaaaatgcctcaatttctc 5725875  T
Q  205 ttggtcatgaattcaaattttggtggtctccacaaaattgatttt 249  Q
    | ||||| ||| ||||||||||||  |||  ||||||||||||||    
T  5725874 taggtcacgaaatcaaattttggt-ctctatacaaaattgatttt 5725831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 23286970 - 23286927
Alignment:
Q  401 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23286970 ggaacttctacggtacacccgcaaattaaggtgtaccggtactc 23286927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 535
Target Start/End: Complemental strand, 27970419 - 27970283
Alignment:
Q  398 ttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctat 496  Q
    ||||| || ||||||||||||| |  ||||| |||||||||||||||| |||||||||||| | ||| ||||   ||||||| ||| ||||||||| |||    
T  27970419 ttggggacctctacggtacaccacataaattgaggtgtaccggtactc-tacttcaaaaatttataatttaaggattatttt-atgaaataaagagttat 27970322  T
Q  497 ttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    || | ||||||||||||||||||||  |||||| |||||    
T  27970321 ttatcgatatttatattttagaaaacatcattttataag 27970283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 535
Target Start/End: Original strand, 31893319 - 31893468
Alignment:
Q  386 aaggttaacattttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatgga 484  Q
    |||||||| || ||||||||||||||| |||||| | |||||| |||||||||| |||||||  ||||||||| | ||| |||||  | ||||| ||| |    
T  31893319 aaggttaatatgttgggaacttctacgttacacctcacaaattgaggtgtaccgatactcctgtttcaaaaatttataatttaacgatcatttt-atgaa 31893417  T
Q  485 ataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||| ||||| |  |||||||||||||| ||||  |||||| |||||    
T  31893418 ataaagagttatttatcaatatttatattttataaaacatcattttataag 31893468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 2261420 - 2261303
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||| ||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||  | | |||||||| |||||| ||||||||    
T  2261420 gggaacttctatggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttgtaaattaacgatcattttttatgtaataaatagctattt 2261321  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  2261320 gtcaatatttatatttta 2261303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 946377 - 946333
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  946377 gggaacttctacggtacacccgcaaattacggtgtaccggtactc 946333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 28090596 - 28090552
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  28090596 gggaacttctacggtacacccgcaatttaaggtgtaccggtactc 28090552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 29460041 - 29459997
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  29460041 gggaacttctacggtacacctgcaaattaaggtgtaccggtactc 29459997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 44935304 - 44935260
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  44935304 gggaacttctacggtacacccgcaatttaaggtgtaccggtactc 44935260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 535
Target Start/End: Complemental strand, 3643008 - 3642945
Alignment:
Q  472 ttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||||| ||||||||| ||||||||||  ||||||||||||||||| | ||||||||||    
T  3643008 ttatttttatgtaataaagagatatttgttgacttttatattttagaaaatattatttcataag 3642945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 12722313 - 12722437
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttggatgnnnnnnnggcctctaaaaaattaattttgttataagtatatt 135  Q
    |||||| |||||||||||  ||| ||||||| | ||||||||| || |||||||||||       || || ||||||||||||||  |||||| ||||||    
T  12722313 ggccggtctaagggccaaataactcaagcaaagactttaggcctcaaaattttggatgaaaaaaaggtctttaaaaaattaatttgattataaatatatt 12722412  T
Q  136 atatgacatataaattatagacatt 160  Q
    |||||| | || |||||||||||||    
T  12722413 atatgatagatgaattatagacatt 12722437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 17792610 - 17792475
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||| ||||||| |  ||||||||||||| |||||||||| ||||  |||| | || ||||||  | | ||||||| |||||| || ||||||    
T  17792610 gggaacttctatggtacactcataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttg 17792511  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||||| | ||||||| ||||||||||||    
T  17792510 tcggcatttatatctcagaaaatatcatttcataag 17792475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 29773850 - 29773807
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtact 443  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  29773850 gggaacttctacggtacacccgcaatttaaggtgtaccggtact 29773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 26439509 - 26439559
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctactt 450  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  26439509 gggaacttctacggtacatccacaaattaaggtgtatcggtactcctactt 26439559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 27100886 - 27100947
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||| |||||| ||||||||||  |||||||||||||||||||  ||||||||||||    
T  27100886 atttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttcataag 27100947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 522
Target Start/End: Complemental strand, 2165153 - 2165037
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||||| |||| |||| |||| |||| | ||| |||||  | |||||||||  |||||||| ||||| | ||      
T  2165153 ttctacggtacaccctgcaattaaggtgtaccagtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgact 2165054  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  2165053 tttatattttagaaaat 2165037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 3053206 - 3053070
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctt-taaattaactgttatttttatggaataaagagctattt 498  Q
    |||||||||||||||| || |  |||||   |||||||| ||||| |  |||| ||| ||| |||||||||  | ||||||||| |||||| || |||||    
T  3053206 gggaacttctacggtatactcagaaattttagtgtaccgatactcttgtttcacaaaacttataaattaacgatcatttttatgaaataaaaagttattt 3053107  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||  ||||||||||||||||||| ||||| |||||||    
T  3053106 gtcaatatttatattttagaaaacgtcatatcataag 3053070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 531
Target Start/End: Complemental strand, 6631516 - 6631388
Alignment:
Q  403 aacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttg 502  Q
    ||||| |||||||||| || ||||| ||||||| |||||||| | ||||| |||||| |||| ||||  | | ||||||| |||||  || ||||||| |    
T  6631516 aacttatacggtacactcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacgatcaattttatgaaataattagttatttgtcg 6631417  T
Q  503 atatttatattttagaaaatgtcatttca 531  Q
      |||||||||||||||||| | ||||||    
T  6631416 gcatttatattttagaaaatatgatttca 6631388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 6799783 - 6799843
Alignment:
Q  400 gggaacttctacggtacacccgcaaa-ttaaggtgtaccggtactcctacttcaaaaatct 459  Q
    |||||||||||||||||||| ||||| |||||||||||||  |||| ||||||||||||||    
T  6799783 gggaacttctacggtacacctgcaaaattaaggtgtaccgccactcttacttcaaaaatct 6799843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 427 - 535
Target Start/End: Complemental strand, 12980392 - 12980284
Alignment:
Q  427 taaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgtca 526  Q
    ||||||||| ||| || |||| |||| ||||| |||| |||||  | ||||||||| ||||||||| ||||||| |   ||||||||||||||||| | |    
T  12980392 taaggtgtatcggaacacctatttcataaatcattaagttaacgatcatttttatgtaataaagagatatttgtcggcttttatattttagaaaatatta 12980293  T
Q  527 tttcataag 535  Q
    |||||||||    
T  12980292 tttcataag 12980284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 534
Target Start/End: Original strand, 18844234 - 18844294
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    ||||||||| |||||| ||||||||||  |||||||||||||||||||  |||||||||||    
T  18844234 atttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttcataa 18844294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 23275031 - 23274991
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccgg 439  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  23275031 tgggaacttctacgatacacccgcaaattaaggtgtaccgg 23274991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 519
Target Start/End: Original strand, 35754483 - 35754577
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaa 519  Q
    ||||||||||||| ||||||||||||||||||||| ||  | |||||  ||| ||||||| ||||||||| ||||| |  |||||||||||||||||    
T  35754483 aaattaaggtgtatcggtactcctacttcaaaaat-ttatatttaacgatta-ttttatgaaataaagagttatttataaatatttatattttagaa 35754577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 37511495 - 37511451
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  37511495 gggaacttctacggtacatccgtaaattaaggtgtaccggtactc 37511451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 38764738 - 38764873
Alignment:
Q  400 gggaacttctacggtacacccg-caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||||   |||||| ||||||| |||||||||| ||||||| || |  || |||||  ||||||| ||| ||||||||| |||||    
T  38764738 gggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttattt 38764836  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |  |||||||||||||| || || |||||| |||||    
T  38764837 atcaatatttatattttataatatatcattttataag 38764873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 23273879 - 23273825
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaattttgg 90  Q
    ||||| ||||||||||||||||||||| |||||| |||||||| || ||||||||    
T  23273879 ggccgtcctaagggccaagcaacccaaacaagggttttaggcctcaaaattttgg 23273825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 533
Target Start/End: Complemental strand, 28886087 - 28885955
Alignment:
Q  401 ggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaa-aaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||||||||||| | |||||| |||||||||| ||||| |  ||| | |||| | ||||||||   ||||||| ||| |||||| |||||||     
T  28886087 ggaacttctacggtacacctcacaaattgaggtgtaccgatactc-tcgttctataaatttataaattaaggattatttt-atgaaataaaaagctatta 28885990  T
Q  499 gttgatatttatattttagaaaatgtcatttcata 533  Q
    ||| |||||||||||||||||||  ||||||||||    
T  28885989 gttaatatttatattttagaaaacatcatttcata 28885955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 535
Target Start/End: Original strand, 36496170 - 36496280
Alignment:
Q  425 attaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaatgt 524  Q
    |||||||||||||||||| |||| |||| || ||  ||| |||||  | ||||||||| ||||||||| | | | ||||  ||||||||||| ||||| |    
T  36496170 attaaggtgtaccggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctattgacttttatattttaaaaaatat 36496269  T
Q  525 catttcataag 535  Q
    |||||||||||    
T  36496270 catttcataag 36496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 7128090 - 7128207
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    ||||||||||| ||||||| | |||| | |||||||||| ||||||| ||||  || ||| ||||| |||  | | |||||||| | |||| ||||||||    
T  7128090 gggaacttctatggtacactcacaaaatgaggtgtaccgatactcctgcttcttaattctataaatgaacgataattttttatgtagtaaatagctattt 7128189  T
Q  499 gttgatatttatatttta 516  Q
    ||| ||||||||||||||    
T  7128190 gttaatatttatatttta 7128207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 535
Target Start/End: Complemental strand, 27172318 - 27172185
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgtt 501  Q
    ||||||||| |||||||    ||||||||||||| |||||||||| ||||  |||| | || ||||||  | | ||||||| |||||| || |||||||     
T  27172318 gaacttctatggtacactaataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtc 27172219  T
Q  502 gatatttatattttagaaaatgtcatttcataag 535  Q
    |  |||||||| | ||||||| ||||||||||||    
T  27172218 ggcatttatatctcagaaaatatcatttcataag 27172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 29039688 - 29039749
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    ||||||||| |||||| || |||||||  ||||||||||||||||||| ||||| |||||||    
T  29039688 atttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataag 29039749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 521
Target Start/End: Complemental strand, 34520975 - 34520857
Alignment:
Q  402 gaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgt 500  Q
    |||||||||||||||||| | |||||| ||||||| || ||||||||||||| |||| | | |||||||  | ||||||  | |||||  || ||||||     
T  34520975 gaacttctacggtacacctcacaaattgaggtgtatcgatactcctacttcataaatttatgaattaacgatcattttt--gaaataagtagttatttga 34520878  T
Q  501 tgatatttatattttagaaaa 521  Q
    | |||||||||||||||||||    
T  34520877 taatatttatattttagaaaa 34520857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 535
Target Start/End: Complemental strand, 36835750 - 36835613
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttca-aaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    |||||||||||| ||||||| | ||| ||   |||||||||||||| |  |||| ||||| | |||||||||  | | ||| ||| |||||| || ||||    
T  36835750 tgggaacttctatggtacactcacaattttgagtgtaccggtactcttgtttcacaaaatatataaattaacgatcactttaatgaaataaaaaggtatt 36835651  T
Q  498 tgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||  |||||||||||||||||||  ||||||||||||    
T  36835650 tgtcaatatttatattttagaaaacatcatttcataag 36835613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Original strand, 40776637 - 40776754
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttt-tatggaataaagagctattt 498  Q
    ||||| ||||| ||||||| | |||| | || ||||||| ||||||| ||||| || | | |||||||||  | ||||| ||||||||||| ||||||||    
T  40776637 gggaatttctatggtacactcacaaagtgagatgtaccgatactcctgcttcataattttataaattaacgatcattttttatggaataaatagctattt 40776736  T
Q  499 gttgatatttatatttta 516  Q
    ||  ||||||||||||||    
T  40776737 gtcaatatttatatttta 40776754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 522
Target Start/End: Original strand, 9178726 - 9178842
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||| ||   |||||||||||| | |||| |||| |||| |||||| ||| |||||  | |||||||||  |||||||| ||||| | ||      
T  9178726 ttctacggtacatccttcaattaaggtgtatcagtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgact 9178825  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  9178826 tttatattttagaaaat 9178842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 15725890 - 15725934
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||    
T  15725890 gggaacttctacggtacacctgcaaattacggtgtaccgatactc 15725934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 263
Target Start/End: Original strand, 17856810 - 17856937
Alignment:
Q  128 agtatattatatgacatataaattatagacattaatttgcatatcttaacttattaccaaaaaagtctcaattgctcttggtcatgaattcaaattttgg 227  Q
    |||||||||||| ||  |||||||| |||||||    || ||| ||||||  |||| |||||| |||| |||| ||||||||||| |||||||||||       
T  17856810 agtatattatataactaataaattacagacatt----tgtatagcttaaccgattatcaaaaatgtcttaattactcttggtcataaattcaaattt--- 17856902  T
Q  228 tggtctccacaaaattgatttttatttaaatattct 263  Q
    |||||| |||| |||||| |||||| ||||||||||    
T  17856903 tggtcttcacataattga-ttttatataaatattct 17856937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 24580085 - 24580033
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggccacacaatttt 88  Q
    |||| ||||||||||||||| ||||||||||||||||||| || || ||||||    
T  24580085 ggccagcctaagggccaagccacccaagcaagggctttagtcctcaaaatttt 24580033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 29229176 - 29229220
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||    
T  29229176 gggatcttctacggtacacccgtaaattacggtgtaccggtactc 29229220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 515
Target Start/End: Original strand, 34047444 - 34047531
Alignment:
Q  427 taaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatatttt 515  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||  ||| ||||||  |||||| || ||||| || |||||||||||||    
T  34047444 taaggtgtaccggtacttctacttcaaaaatttataatttaacgatta-ttttataaaataaaaagttatttattaatatttatatttt 34047531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 535
Target Start/End: Original strand, 42164931 - 42165042
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||| |||||||||| ||||| ||||| |||||| | ||| |||||  ||||||| ||| ||||||||  ||||| |  |||||||||||||||||||     
T  42164931 aaattgaggtgtaccgatactcatactttaaaaatttataatttaacgattatttt-atgaaataaagaattatttatcaatatttatattttagaaaac 42165029  T
Q  523 gtcatttcataag 535  Q
     |||||| |||||    
T  42165030 atcattttataag 42165042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 44000561 - 44000697
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctattt 498  Q
    |||| |||||||||||||| | |||| | ||||||| |||||||| | ||||| || | | |||||||||  ||| |||||||| |||||| | ||||||    
T  44000561 gggatcttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgattattttttatgaaataaataactattt 44000660  T
Q  499 gttgatatttatattttagaaaatgtcatttcataag 535  Q
     |  |||||||||||||| | ||  ||||||||||||    
T  44000661 atcaatatttatattttatagaacatcatttcataag 44000697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 516
Target Start/End: Complemental strand, 118214 - 118099
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgt 500  Q
    ||||||||| ||||||| | |||| | |||||||||||||||||| ||||  || ||| ||||| |||  | | |||||||| | |||| ||||||||||    
T  118214 gaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattctataaatgaacgatcattttttatgtagtaaatagctatttgt 118115  T
Q  501 tgatatttatatttta 516  Q
      ||||||||||||||    
T  118114 caatatttatatttta 118099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 196151 - 196202
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  196151 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 196202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 310988 - 311039
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||| || |||||||| |||||||||||||||||||  ||||||||||||    
T  310988 aataaaaaggtatttgttaatatttatattttagaaaacatcatttcataag 311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 446
Target Start/End: Original strand, 9508857 - 9508904
Alignment:
Q  400 gggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcct 446  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||    
T  9508857 gggaacttctacggtacacctcacaaattagggtgtaccggtactcct 9508904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 516
Target Start/End: Original strand, 37675943 - 37676054
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagctatttgttgat 504  Q
    ||||||||||||| | |||| | |||||||||||||||||||||||  || | | ||||| |||  | | |||||||| | |||| ||||||||||  ||    
T  37675943 ttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaatagctatttgtcaat 37676042  T
Q  505 atttatatttta 516  Q
    ||||||||||||    
T  37676043 atttatatttta 37676054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 451
Target Start/End: Complemental strand, 38210726 - 38210675
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    ||||||||||||||||||| || ||| |||||||||||| ||||||| ||||    
T  38210726 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttc 38210675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 38803764 - 38803709
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttca 531  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||  ||||||||    
T  38803764 ttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttca 38803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 40547690 - 40547824
Alignment:
Q  400 gggaacttctacggtacacccg-caaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctattt 498  Q
    ||||||||||| ||||||||   |||| | |||||||||||||||| ||||||| ||||   |||||||||  ||| ||||||| |||||| | ||||||    
T  40547690 gggaacttctatggtacacctaacaaaatgaggtgtaccggtactcttacttcataaattgataaattaacaatta-ttttatgaaataaaaatctattt 40547788  T
Q  499 gttgatatttatattttagaaaatgtcatttcataa 534  Q
     |  || ||||||||||||||||  |||| ||||||    
T  40547789 atcaatgtttatattttagaaaacatcatctcataa 40547824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 12180254 - 12180192
Alignment:
Q  473 tatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||| | |||||| || |||||||  |||||||||||||||| | ||||||||||||    
T  12180254 tatttttatgaagtaaagaactctttgttggcatttatattttagaaagtatcatttcataag 12180192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 12424682 - 12424620
Alignment:
Q  473 tatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||| | |||||| || |||||||  |||||||||||||||| | ||||||||||||    
T  12424682 tatttttatgaagtaaagaactctttgttggcatttatattttagaaagtatcatttcataag 12424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 12520606 - 12520564
Alignment:
Q  36 ggccggcctaagggccaagcaacccaagcaagggctttaggcc 78  Q
    |||||||||||||||||| | ||||||||||||| ||||||||    
T  12520606 ggccggcctaagggccaaaccacccaagcaagggttttaggcc 12520564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 522
Target Start/End: Complemental strand, 24377712 - 24377586
Alignment:
Q  396 ttttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagcta 495  Q
    |||||| |||||| ||| ||||| || ||||| |||||||||||||||| | ||||| |||| | |||| || |  | | ||||||| |||||| || ||    
T  24377712 ttttggcaacttcaacgatacactcgtaaattgaggtgtaccggtactcttgcttcataaatttataaactagcaatcaattttatgaaataaatagtta 24377613  T
Q  496 tttgttgatatttatattttagaaaat 522  Q
    ||| | |  ||||||||||||||||||    
T  24377612 tttatcggcatttatattttagaaaat 24377586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 519
Target Start/End: Original strand, 6799847 - 6799892
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaa 519  Q
    ||||| ||| ||||||||||||||| ||||||||| ||||||||||    
T  6799847 attttaatgaaataaagagctatttcttgatatttgtattttagaa 6799892  T

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Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 533
Target Start/End: Complemental strand, 12801436 - 12801379
Alignment:
Q  476 ttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcata 533  Q
    ||||||| |||||| ||||||| ||  |||||||||||||||||||  ||||||||||    
T  12801436 ttttatgaaataaaaagctattagtcaatatttatattttagaaaacatcatttcata 12801379  T

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Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 39646639 - 39646688
Alignment:
Q  402 gaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttc 451  Q
    |||||||||||||||||    ||| |||||||||||||||||||||||||    
T  39646639 gaacttctacggtacacttataaaataaggtgtaccggtactcctacttc 39646688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 474 - 522
Target Start/End: Original strand, 4471518 - 4471566
Alignment:
Q  474 atttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||||||| || |||||||||||||| ||  |||||||||||||||||    
T  4471518 atttttatgtaacaaagagctatttgtcgacttttatattttagaaaat 4471566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 535
Target Start/End: Original strand, 24937608 - 24937720
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    |||||||||||||  ||||||||| ||||  |||| | || ||||||  | | ||||||| |||||| || ||||||| |  |||||||| | |||||||    
T  24937608 aaattaaggtgtattggtactcctgcttcttaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatctcagaaaat 24937707  T
Q  523 gtcatttcataag 535  Q
     ||||||||||||    
T  24937708 atcatttcataag 24937720  T

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Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 535
Target Start/End: Original strand, 36274587 - 36274699
Alignment:
Q  423 aaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgatatttatattttagaaaat 522  Q
    ||||| |||||||| ||||||| | ||||  |||| | |||||||||  | | ||||||| |||||| || |||| || || ||||||||||||||||||    
T  36274587 aaattgaggtgtactggtactcttgcttcctaaatatataaattaacgatcaattttatgaaataaatagttattcgtcgacatttatattttagaaaat 36274686  T
Q  523 gtcatttcataag 535  Q
       ||||||||||    
T  36274687 aagatttcataag 36274699  T

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Target: scaffold0625 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 400 - 535
Target Start/End: Original strand, 6266 - 6401
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  || |||||| |||||||||||||||||    
T  6266 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctactttaaaaatctttaaattaactagtacttttatagaataaagagctatttg 6365  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||||||||||| |||||||||||| ||||    
T  6366 ttgatatttatattttaggaaatgtcatttcttaag 6401  T

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Target: scaffold0667 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 242 - 104
Alignment:
Q  397 tttgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgtta-tttttatggaataaagagcta 495  Q
    |||||||||||||||||||||| | |||| | ||||||||||||||| || ||||| || | | |||||||||  | | |||||||| |||||| |||||    
T  242 tttgggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaatagcta 143  T
Q  496 tttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||  |||||||||||||| | ||  |||||||||||    
T  142 tttgtcaatatttatattttatataacatcatttcataa 104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 400 - 535
Target Start/End: Complemental strand, 45479 - 45344
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttg 499  Q
    ||||||||||||  ||||| || |||||| ||||||||||||||| |||||   |||||| |||||||||  | | ||||||| |||||| || ||||||    
T  45479 gggaacttctacactacactcgtaaattatggtgtaccggtactcttacttactaaatctataaattaacgatcaattttatgaaataaatagttatttg 45380  T
Q  500 ttgatatttatattttagaaaatgtcatttcataag 535  Q
    | |  |||||||||| ||||||  ||||||||||||    
T  45379 tcggcatttatatttcagaaaacatcatttcataag 45344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 522
Target Start/End: Original strand, 262831 - 262947
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||| |||||| |||| |||| |||||| |||  |||   | |||||||||  |||||||| ||||| | ||      
T  262831 ttctacggtacacccttcaattaaggtgtatcggtacacctatttcataaatctataaggtaaagataatttttatgtgataaagagatatttatcgact 262930  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  262931 tttatattttagaaaat 262947  T

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Target: scaffold0283 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 6644 - 6600
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  6644 gggaacttctacggtacacccgcaatttaaggtgtaccggtactc 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 48415 - 48371
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  48415 gggaacttctacggtacacccgcaatttaaggtgtaccggtactc 48371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 58170 - 58126
Alignment:
Q  400 gggaacttctacggtacacccgcaaattaaggtgtaccggtactc 444  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  58170 gggaacttctacggtacacccgcaatttaaggtgtaccggtactc 58126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 520
Target Start/End: Original strand, 8631 - 8678
Alignment:
Q  473 tatttttatggaataaagagctatttgttgatatttatattttagaaa 520  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  8631 tatttttatgaaataaagagttatttgttgatatttatattttagaaa 8678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 17072 - 17009
Alignment:
Q  395 attttgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaat 457  Q
    ||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||| ||||    
T  17072 attttgggaacttctacggtacacctcacaaattgaggtgtaccgatactcctacttcataaat 17009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 535
Target Start/End: Complemental strand, 46095 - 46033
Alignment:
Q  473 tatttttatggaataaagagctatttgttgatatttatattttagaaaatgtcatttcataag 535  Q
    |||||||||| ||||||||||||||| | | ||| ||||||||||||||| ||||||||||||    
T  46095 tatttttatgaaataaagagctatttatcggtatctatattttagaaaatatcatttcataag 46033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 7637 - 7580
Alignment:
Q  103 cctctaaaaaattaattttgttataagtatattatatgacatataaattatagacatt 160  Q
    |||||||||||||||||| |||| ||| ||||||||||| | ||||||||||||||||    
T  7637 cctctaaaaaattaatttggttagaagcatattatatgatagataaattatagacatt 7580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 92 - 22
Alignment:
Q  399 tgggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaac 469  Q
    |||||||||||||||||||| | |||| | |||||||||||||||||| ||||| || | | |||||||||    
T  92 tgggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaac 22  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 522
Target Start/End: Original strand, 70700 - 70816
Alignment:
Q  406 ttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatttgttgata 505  Q
    |||||||||||||||   |||||||||||| | |||| |||| |||| |||||| ||| |||||| | |||||||||  |||||  | ||||| | ||      
T  70700 ttctacggtacacccttcaattaaggtgtatcagtacacctatttcataaatctataagttaactataatttttatgtgataaacggatatttatcgact 70799  T
Q  506 tttatattttagaaaat 522  Q
    |||||||||||||||||    
T  70800 tttatattttagaaaat 70816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 534
Target Start/End: Original strand, 17582 - 17632
Alignment:
Q  484 aataaagagctatttgttgatatttatattttagaaaatgtcatttcataa 534  Q
    |||||| || ||||||| ||||||||||||||||||||  |||||||||||    
T  17582 aataaaaaggtatttgtcgatatttatattttagaaaacatcatttcataa 17632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 214547 - 214430
Alignment:
Q  399 tgggaacttctacggtacacc-cgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactgttatttttatggaataaagagctatt 497  Q
    ||||||||||||||||||||| |  ||||| |  ||||||||||||||| ||||||| || |  || |||||  ||||||| ||| ||||||||| ||||    
T  214547 tgggaacttctacggtacacctcataaattgaattgtaccggtactcctgcttcaaatatttacaatttaacgattatttt-atgaaataaagagttatt 214449  T
Q  498 tgttgatatttatatttta 516  Q
    | |  ||||||||||||||    
T  214448 tatcaatatttatatttta 214430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 2299 - 2331
Alignment:
Q  194 ctcaattgctcttggtcatgaattcaaattttg 226  Q
    ||||||| |||||||||||||||||||||||||    
T  2299 ctcaattactcttggtcatgaattcaaattttg 2331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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